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Inflammatory response time course, HUVEC (Wada et al., 2009)

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Results for CUGGCUG

Z-value: 0.28

Motif logo

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miRNA associated with seed CUGGCUG

NamemiRBASE accession
hsa-miR-3064-5p
MIMAT0019864
hsa-miR-6504-5p
MIMAT0025464

Activity profile of CUGGCUG motif

Sorted Z-values of CUGGCUG motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr9_+_116917807 0.39 ENST00000356083.3
COL27A1
collagen, type XXVII, alpha 1
chr10_-_105615164 0.35 ENST00000355946.2
ENST00000369774.4
SH3PXD2A
SH3 and PX domains 2A
chr16_-_65155833 0.29 ENST00000566827.1
ENST00000394156.3
ENST00000562998.1
CDH11
cadherin 11, type 2, OB-cadherin (osteoblast)
chr1_-_57045228 0.28 ENST00000371250.3
PPAP2B
phosphatidic acid phosphatase type 2B
chr11_-_72385437 0.27 ENST00000418754.2
ENST00000542969.2
ENST00000334456.5
PDE2A
phosphodiesterase 2A, cGMP-stimulated
chrX_+_9431324 0.26 ENST00000407597.2
ENST00000424279.1
ENST00000536365.1
ENST00000441088.1
ENST00000380961.1
ENST00000415293.1
TBL1X
transducin (beta)-like 1X-linked
chr8_-_119124045 0.26 ENST00000378204.2
EXT1
exostosin glycosyltransferase 1
chr15_+_67358163 0.25 ENST00000327367.4
SMAD3
SMAD family member 3
chr10_+_73724123 0.25 ENST00000373115.4
CHST3
carbohydrate (chondroitin 6) sulfotransferase 3
chr5_+_149887672 0.24 ENST00000261797.6
NDST1
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr14_+_70078303 0.23 ENST00000342745.4
KIAA0247
KIAA0247
chr1_+_218519577 0.22 ENST00000366930.4
ENST00000366929.4
TGFB2
transforming growth factor, beta 2
chr1_+_110453203 0.22 ENST00000357302.4
ENST00000344188.5
ENST00000329608.6
CSF1
colony stimulating factor 1 (macrophage)
chr1_-_33430286 0.19 ENST00000373456.7
ENST00000356990.5
ENST00000235150.4
RNF19B
ring finger protein 19B
chr6_-_138428613 0.19 ENST00000421351.3
PERP
PERP, TP53 apoptosis effector
chr15_+_75498355 0.19 ENST00000567617.1
C15orf39
chromosome 15 open reading frame 39
chr1_+_150122034 0.18 ENST00000025469.6
ENST00000369124.4
PLEKHO1
pleckstrin homology domain containing, family O member 1
chr7_-_98741642 0.17 ENST00000361368.2
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
chr21_-_43346790 0.16 ENST00000329623.7
C2CD2
C2 calcium-dependent domain containing 2
chr19_+_13135386 0.16 ENST00000360105.4
ENST00000588228.1
ENST00000591028.1
NFIX
nuclear factor I/X (CCAAT-binding transcription factor)
chr17_-_78009647 0.16 ENST00000310924.2
TBC1D16
TBC1 domain family, member 16
chr17_-_48207157 0.14 ENST00000330175.4
ENST00000503131.1
SAMD14
sterile alpha motif domain containing 14
chr6_+_37787262 0.14 ENST00000287218.4
ZFAND3
zinc finger, AN1-type domain 3
chr5_-_121413974 0.13 ENST00000231004.4
LOX
lysyl oxidase
chr3_-_39195037 0.12 ENST00000273153.5
CSRNP1
cysteine-serine-rich nuclear protein 1
chr1_+_206808918 0.11 ENST00000367108.3
DYRK3
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
chr11_-_72504637 0.11 ENST00000536377.1
ENST00000359373.5
STARD10
ARAP1
StAR-related lipid transfer (START) domain containing 10
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr20_+_32581452 0.11 ENST00000375114.3
ENST00000448364.1
RALY
RALY heterogeneous nuclear ribonucleoprotein
chr8_-_141645645 0.11 ENST00000519980.1
ENST00000220592.5
AGO2
argonaute RISC catalytic component 2
chr5_+_133861790 0.10 ENST00000395003.1
PHF15
jade family PHD finger 2
chr22_-_38669030 0.10 ENST00000361906.3
TMEM184B
transmembrane protein 184B
chr5_-_147162078 0.10 ENST00000507386.1
JAKMIP2
janus kinase and microtubule interacting protein 2
chr14_+_55034599 0.10 ENST00000392067.3
ENST00000357634.3
SAMD4A
sterile alpha motif domain containing 4A
chr11_+_118477144 0.10 ENST00000361417.2
PHLDB1
pleckstrin homology-like domain, family B, member 1
chr5_-_160973649 0.09 ENST00000393959.1
ENST00000517547.1
GABRB2
gamma-aminobutyric acid (GABA) A receptor, beta 2
chr5_-_132948216 0.09 ENST00000265342.7
FSTL4
follistatin-like 4
chr1_-_153931052 0.09 ENST00000368630.3
ENST00000368633.1
CRTC2
CREB regulated transcription coactivator 2
chr9_+_124413873 0.09 ENST00000408936.3
DAB2IP
DAB2 interacting protein
chr2_-_208030647 0.09 ENST00000309446.6
KLF7
Kruppel-like factor 7 (ubiquitous)
chr18_+_9708162 0.09 ENST00000578921.1
RAB31
RAB31, member RAS oncogene family
chr11_+_71640071 0.08 ENST00000533380.1
ENST00000393713.3
ENST00000545854.1
RNF121
ring finger protein 121
chr12_-_56652111 0.08 ENST00000267116.7
ANKRD52
ankyrin repeat domain 52
chr5_-_146833485 0.08 ENST00000398514.3
DPYSL3
dihydropyrimidinase-like 3
chr15_+_66679155 0.08 ENST00000307102.5
MAP2K1
mitogen-activated protein kinase kinase 1
chr16_-_71758602 0.08 ENST00000568954.1
PHLPP2
PH domain and leucine rich repeat protein phosphatase 2
chr2_+_74425689 0.07 ENST00000394053.2
ENST00000409804.1
ENST00000264090.4
ENST00000394050.3
ENST00000409601.1
MTHFD2
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
chr17_-_3539558 0.07 ENST00000225519.3
SHPK
sedoheptulokinase
chr2_+_30454390 0.07 ENST00000395323.3
ENST00000406087.1
ENST00000404397.1
LBH
limb bud and heart development
chr11_+_45868957 0.07 ENST00000443527.2
CRY2
cryptochrome 2 (photolyase-like)
chr18_+_19749386 0.07 ENST00000269216.3
GATA6
GATA binding protein 6
chr11_-_61348576 0.07 ENST00000263846.4
SYT7
synaptotagmin VII
chr20_-_41818373 0.07 ENST00000373187.1
ENST00000356100.2
ENST00000373184.1
ENST00000373190.1
PTPRT
protein tyrosine phosphatase, receptor type, T
chr7_+_31092076 0.07 ENST00000304166.4
ADCYAP1R1
adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
chr19_-_15560730 0.07 ENST00000389282.4
ENST00000263381.7
WIZ
widely interspaced zinc finger motifs
chr6_-_33547975 0.07 ENST00000442998.2
ENST00000360661.5
BAK1
BCL2-antagonist/killer 1
chr8_+_37887772 0.06 ENST00000338825.4
EIF4EBP1
eukaryotic translation initiation factor 4E binding protein 1
chr16_-_11036300 0.06 ENST00000331808.4
DEXI
Dexi homolog (mouse)
chr14_-_75389975 0.06 ENST00000555647.1
ENST00000557413.1
RPS6KL1
ribosomal protein S6 kinase-like 1
chr12_-_498620 0.06 ENST00000399788.2
ENST00000382815.4
KDM5A
lysine (K)-specific demethylase 5A
chr16_+_31085714 0.06 ENST00000300850.5
ENST00000564189.1
ENST00000428260.1
ZNF646
zinc finger protein 646
chr17_-_33700626 0.06 ENST00000308377.4
ENST00000394566.1
ENST00000589811.1
ENST00000430814.1
ENST00000427966.1
ENST00000588579.1
ENST00000591682.1
ENST00000441608.2
ENST00000592122.1
SLFN11
schlafen family member 11
chr8_+_21946681 0.06 ENST00000289921.7
FAM160B2
family with sequence similarity 160, member B2
chr14_+_65171099 0.06 ENST00000247226.7
PLEKHG3
pleckstrin homology domain containing, family G (with RhoGef domain) member 3
chr22_-_42828375 0.06 ENST00000329021.5
NFAM1
NFAT activating protein with ITAM motif 1
chr20_+_35974532 0.06 ENST00000373578.2
SRC
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog
chr1_-_154842741 0.06 ENST00000271915.4
KCNN3
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
chr3_-_138553594 0.06 ENST00000477593.1
ENST00000483968.1
PIK3CB
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
chr1_+_32645269 0.06 ENST00000373610.3
TXLNA
taxilin alpha
chr17_+_34058639 0.05 ENST00000268864.3
RASL10B
RAS-like, family 10, member B
chr11_-_106889250 0.05 ENST00000526355.2
GUCY1A2
guanylate cyclase 1, soluble, alpha 2
chr3_+_196594727 0.05 ENST00000445299.2
ENST00000323460.5
ENST00000419026.1
SENP5
SUMO1/sentrin specific peptidase 5
chr7_+_140774032 0.05 ENST00000565468.1
TMEM178B
transmembrane protein 178B
chr2_+_105471969 0.05 ENST00000361360.2
POU3F3
POU class 3 homeobox 3
chr11_+_120382417 0.05 ENST00000527524.2
ENST00000375081.2
GRIK4
AP002348.1
glutamate receptor, ionotropic, kainate 4
Uncharacterized protein
chr22_+_26138108 0.05 ENST00000536101.1
ENST00000335473.7
ENST00000407587.2
MYO18B
myosin XVIIIB
chr17_-_4607335 0.05 ENST00000570571.1
ENST00000575101.1
ENST00000436683.2
ENST00000574876.1
PELP1
proline, glutamate and leucine rich protein 1
chr3_-_131221790 0.05 ENST00000512877.1
ENST00000264995.3
ENST00000511168.1
ENST00000425847.2
MRPL3
mitochondrial ribosomal protein L3
chr17_+_38375574 0.05 ENST00000323571.4
ENST00000585043.1
ENST00000394103.3
ENST00000536600.1
WIPF2
WAS/WASL interacting protein family, member 2
chr20_+_33292068 0.05 ENST00000374810.3
ENST00000374809.2
ENST00000451665.1
TP53INP2
tumor protein p53 inducible nuclear protein 2
chr17_-_27916621 0.05 ENST00000225394.3
GIT1
G protein-coupled receptor kinase interacting ArfGAP 1
chr17_-_79829190 0.05 ENST00000581876.1
ENST00000584461.1
ENST00000583868.1
ENST00000400721.4
ENST00000269321.7
ARHGDIA
Rho GDP dissociation inhibitor (GDI) alpha
chr14_+_23845995 0.05 ENST00000359320.3
CMTM5
CKLF-like MARVEL transmembrane domain containing 5
chr1_-_26633067 0.05 ENST00000421827.2
ENST00000374215.1
ENST00000374223.1
ENST00000357089.4
ENST00000535108.1
ENST00000314675.7
ENST00000436301.2
ENST00000423664.1
ENST00000374221.3
UBXN11
UBX domain protein 11
chr15_+_92396920 0.05 ENST00000318445.6
SLCO3A1
solute carrier organic anion transporter family, member 3A1
chr12_-_82153087 0.05 ENST00000547623.1
ENST00000549396.1
PPFIA2
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
chr2_+_25015968 0.05 ENST00000380834.2
ENST00000473706.1
CENPO
centromere protein O
chr1_-_180991978 0.05 ENST00000542060.1
ENST00000258301.5
STX6
syntaxin 6
chr12_+_54943134 0.05 ENST00000243052.3
PDE1B
phosphodiesterase 1B, calmodulin-dependent
chr11_-_115375107 0.05 ENST00000545380.1
ENST00000452722.3
ENST00000537058.1
ENST00000536727.1
ENST00000542447.2
ENST00000331581.6
CADM1
cell adhesion molecule 1
chr12_-_53074182 0.05 ENST00000252244.3
KRT1
keratin 1
chr1_+_27561007 0.05 ENST00000319394.3
WDTC1
WD and tetratricopeptide repeats 1
chr1_+_160175117 0.04 ENST00000360472.4
PEA15
phosphoprotein enriched in astrocytes 15
chr10_-_106098162 0.04 ENST00000337478.1
ITPRIP
inositol 1,4,5-trisphosphate receptor interacting protein
chr9_-_132404374 0.04 ENST00000277459.4
ENST00000450050.2
ENST00000277458.4
ASB6
ankyrin repeat and SOCS box containing 6
chr1_+_11333245 0.04 ENST00000376810.5
UBIAD1
UbiA prenyltransferase domain containing 1
chr20_+_48552908 0.04 ENST00000244061.2
RNF114
ring finger protein 114
chr17_+_57408994 0.04 ENST00000312655.4
YPEL2
yippee-like 2 (Drosophila)
chr2_-_220025548 0.04 ENST00000356853.5
NHEJ1
nonhomologous end-joining factor 1
chr6_+_41040678 0.04 ENST00000341376.6
ENST00000353205.5
NFYA
nuclear transcription factor Y, alpha
chr3_+_38179969 0.04 ENST00000396334.3
ENST00000417037.2
ENST00000424893.1
ENST00000495303.1
ENST00000443433.2
ENST00000421516.1
MYD88
myeloid differentiation primary response 88
chr14_-_77787198 0.04 ENST00000261534.4
POMT2
protein-O-mannosyltransferase 2
chr1_+_50574585 0.04 ENST00000371824.1
ENST00000371823.4
ELAVL4
ELAV like neuron-specific RNA binding protein 4
chr3_-_186080012 0.04 ENST00000544847.1
ENST00000265022.3
DGKG
diacylglycerol kinase, gamma 90kDa
chr17_+_29718642 0.04 ENST00000325874.8
RAB11FIP4
RAB11 family interacting protein 4 (class II)
chr11_-_59383617 0.04 ENST00000263847.1
OSBP
oxysterol binding protein
chr11_+_58346584 0.04 ENST00000316059.6
ZFP91
ZFP91 zinc finger protein
chr1_+_46972668 0.04 ENST00000371956.4
ENST00000360032.3
DMBX1
diencephalon/mesencephalon homeobox 1
chr7_+_108210012 0.04 ENST00000249356.3
DNAJB9
DnaJ (Hsp40) homolog, subfamily B, member 9
chr1_+_15943995 0.04 ENST00000480945.1
DDI2
DNA-damage inducible 1 homolog 2 (S. cerevisiae)
chr11_+_119205222 0.04 ENST00000311413.4
RNF26
ring finger protein 26
chr10_-_81965307 0.04 ENST00000537102.1
ENST00000372231.3
ENST00000438331.1
ENST00000422982.3
ENST00000360615.4
ENST00000265447.4
ANXA11
annexin A11
chr14_+_23775971 0.04 ENST00000250405.5
BCL2L2
BCL2-like 2
chr1_-_17766198 0.04 ENST00000375436.4
RCC2
regulator of chromosome condensation 2
chrX_+_47077632 0.04 ENST00000457458.2
CDK16
cyclin-dependent kinase 16
chr22_-_36784035 0.04 ENST00000216181.5
MYH9
myosin, heavy chain 9, non-muscle
chr9_+_37485932 0.04 ENST00000377798.4
ENST00000442009.2
POLR1E
polymerase (RNA) I polypeptide E, 53kDa
chr17_-_7197881 0.04 ENST00000007699.5
YBX2
Y box binding protein 2
chr11_-_69519410 0.03 ENST00000294312.3
FGF19
fibroblast growth factor 19
chrY_+_15016725 0.03 ENST00000336079.3
DDX3Y
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr6_+_36164487 0.03 ENST00000357641.6
BRPF3
bromodomain and PHD finger containing, 3
chr6_-_44281043 0.03 ENST00000244571.4
AARS2
alanyl-tRNA synthetase 2, mitochondrial
chr12_-_53730147 0.03 ENST00000536324.2
SP7
Sp7 transcription factor
chr8_-_139926236 0.03 ENST00000303045.6
ENST00000435777.1
COL22A1
collagen, type XXII, alpha 1
chr15_-_86338134 0.03 ENST00000337975.5
KLHL25
kelch-like family member 25
chr22_-_43010928 0.03 ENST00000348657.2
ENST00000252115.5
POLDIP3
polymerase (DNA-directed), delta interacting protein 3
chr19_-_14228541 0.03 ENST00000590853.1
ENST00000308677.4
PRKACA
protein kinase, cAMP-dependent, catalytic, alpha
chr17_+_60536002 0.03 ENST00000582809.1
TLK2
tousled-like kinase 2
chr2_-_239197201 0.03 ENST00000254658.3
PER2
period circadian clock 2
chr1_-_37499726 0.03 ENST00000373091.3
ENST00000373093.4
GRIK3
glutamate receptor, ionotropic, kainate 3
chr12_-_58135903 0.03 ENST00000257897.3
AGAP2
ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr20_+_34824355 0.03 ENST00000397286.3
ENST00000320849.4
ENST00000373932.3
AAR2
AAR2 splicing factor homolog (S. cerevisiae)
chr19_-_11591848 0.03 ENST00000359227.3
ELAVL3
ELAV like neuron-specific RNA binding protein 3
chr19_+_41816053 0.03 ENST00000269967.3
CCDC97
coiled-coil domain containing 97
chr8_+_75896731 0.03 ENST00000262207.4
CRISPLD1
cysteine-rich secretory protein LCCL domain containing 1
chr17_-_38721711 0.03 ENST00000578085.1
ENST00000246657.2
CCR7
chemokine (C-C motif) receptor 7
chr17_-_17875688 0.03 ENST00000379504.3
ENST00000318094.10
ENST00000540946.1
ENST00000542206.1
ENST00000395739.4
ENST00000581396.1
ENST00000535933.1
ENST00000579586.1
TOM1L2
target of myb1-like 2 (chicken)
chr1_+_16693578 0.03 ENST00000401088.4
ENST00000471507.1
ENST00000401089.3
ENST00000375590.3
ENST00000492354.1
SZRD1
SUZ RNA binding domain containing 1
chr17_+_16318850 0.03 ENST00000338560.7
TRPV2
transient receptor potential cation channel, subfamily V, member 2
chr3_+_9834227 0.03 ENST00000287613.7
ENST00000397261.3
ARPC4
actin related protein 2/3 complex, subunit 4, 20kDa
chr3_-_12200851 0.03 ENST00000287814.4
TIMP4
TIMP metallopeptidase inhibitor 4
chr19_+_11466062 0.03 ENST00000251473.5
ENST00000591329.1
ENST00000586380.1
DKFZP761J1410
Lipid phosphate phosphatase-related protein type 2
chr7_-_112579869 0.03 ENST00000297145.4
C7orf60
chromosome 7 open reading frame 60
chr9_+_77112244 0.03 ENST00000376896.3
RORB
RAR-related orphan receptor B
chr17_-_60142609 0.03 ENST00000397786.2
MED13
mediator complex subunit 13
chr11_+_66610883 0.03 ENST00000309657.3
ENST00000524506.1
RCE1
Ras converting CAAX endopeptidase 1
chrX_+_152953505 0.03 ENST00000253122.5
SLC6A8
solute carrier family 6 (neurotransmitter transporter), member 8
chr16_+_16043406 0.03 ENST00000399410.3
ENST00000399408.2
ENST00000346370.5
ENST00000351154.5
ENST00000345148.5
ENST00000349029.5
ABCC1
ATP-binding cassette, sub-family C (CFTR/MRP), member 1
chr17_-_18908040 0.03 ENST00000388995.6
FAM83G
family with sequence similarity 83, member G
chr14_-_75179774 0.02 ENST00000555249.1
ENST00000556202.1
ENST00000356357.4
ENST00000338772.5
AREL1
AC007956.1
apoptosis resistant E3 ubiquitin protein ligase 1
Full-length cDNA 5-PRIME end of clone CS0CAP004YO05 of Thymus of Homo sapiens (human); Uncharacterized protein
chr19_-_46476791 0.02 ENST00000263257.5
NOVA2
neuro-oncological ventral antigen 2
chr9_-_37034028 0.02 ENST00000520281.1
ENST00000446742.1
ENST00000522003.1
ENST00000523145.1
ENST00000414447.1
ENST00000377847.2
ENST00000377853.2
ENST00000377852.2
ENST00000523241.1
ENST00000520154.1
ENST00000358127.4
PAX5
paired box 5
chr11_-_134281812 0.02 ENST00000392580.1
ENST00000312527.4
B3GAT1
beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)
chr1_+_151171012 0.02 ENST00000349792.5
ENST00000409426.1
ENST00000441902.2
ENST00000368890.4
ENST00000424999.1
ENST00000368888.4
PIP5K1A
phosphatidylinositol-4-phosphate 5-kinase, type I, alpha
chr5_+_6448736 0.02 ENST00000399816.3
UBE2QL1
ubiquitin-conjugating enzyme E2Q family-like 1
chr19_+_13056663 0.02 ENST00000541222.1
ENST00000316856.3
ENST00000586534.1
ENST00000592268.1
RAD23A
RAD23 homolog A (S. cerevisiae)
chr15_-_64648273 0.02 ENST00000607537.1
ENST00000303052.7
ENST00000303032.6
CSNK1G1
casein kinase 1, gamma 1
chrX_+_47004639 0.02 ENST00000345781.6
RBM10
RNA binding motif protein 10
chr1_+_36348790 0.02 ENST00000373204.4
AGO1
argonaute RISC catalytic component 1
chr1_-_155211017 0.02 ENST00000536770.1
ENST00000368373.3
GBA
glucosidase, beta, acid
chr22_+_31795509 0.02 ENST00000331457.4
DRG1
developmentally regulated GTP binding protein 1
chrX_+_119495934 0.02 ENST00000218008.3
ENST00000361319.3
ENST00000539306.1
ATP1B4
ATPase, Na+/K+ transporting, beta 4 polypeptide
chr10_-_88281494 0.02 ENST00000298767.5
WAPAL
wings apart-like homolog (Drosophila)
chr11_-_64684672 0.02 ENST00000377264.3
ENST00000421419.2
ATG2A
autophagy related 2A
chr19_-_913160 0.02 ENST00000361574.5
ENST00000587975.1
R3HDM4
R3H domain containing 4
chr22_+_38597889 0.02 ENST00000338483.2
ENST00000538320.1
ENST00000538999.1
ENST00000441709.1
MAFF
v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
chr5_+_148521046 0.02 ENST00000326685.7
ENST00000356541.3
ENST00000309868.7
ABLIM3
actin binding LIM protein family, member 3
chr10_+_103911926 0.02 ENST00000605788.1
ENST00000405356.1
NOLC1
nucleolar and coiled-body phosphoprotein 1
chr7_+_66386204 0.02 ENST00000341567.4
ENST00000607045.1
TMEM248
transmembrane protein 248
chr12_-_50297638 0.02 ENST00000320634.3
FAIM2
Fas apoptotic inhibitory molecule 2
chrX_+_49687216 0.02 ENST00000376088.3
CLCN5
chloride channel, voltage-sensitive 5
chr20_+_36149602 0.02 ENST00000062104.2
ENST00000346199.2
NNAT
neuronatin
chr10_+_104678032 0.02 ENST00000369878.4
ENST00000369875.3
CNNM2
cyclin M2
chr16_+_68298405 0.02 ENST00000219343.6
ENST00000566834.1
ENST00000566454.1
SLC7A6
solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
chr11_-_62521614 0.02 ENST00000527994.1
ENST00000394807.3
ZBTB3
zinc finger and BTB domain containing 3
chr3_-_48700310 0.02 ENST00000164024.4
ENST00000544264.1
CELSR3
cadherin, EGF LAG seven-pass G-type receptor 3
chr13_+_24153488 0.02 ENST00000382258.4
ENST00000382263.3
TNFRSF19
tumor necrosis factor receptor superfamily, member 19
chr8_+_143530791 0.02 ENST00000517894.1
BAI1
brain-specific angiogenesis inhibitor 1
chr5_-_98262240 0.02 ENST00000284049.3
CHD1
chromodomain helicase DNA binding protein 1
chr7_-_150864635 0.02 ENST00000297537.4
GBX1
gastrulation brain homeobox 1
chr17_-_1928621 0.02 ENST00000331238.6
RTN4RL1
reticulon 4 receptor-like 1
chr11_+_72929319 0.02 ENST00000393597.2
ENST00000311131.2
P2RY2
purinergic receptor P2Y, G-protein coupled, 2
chr4_-_140477928 0.02 ENST00000274031.3
SETD7
SET domain containing (lysine methyltransferase) 7
chrX_+_41192595 0.02 ENST00000399959.2
DDX3X
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr17_-_33775760 0.02 ENST00000534689.1
ENST00000532210.1
ENST00000526861.1
ENST00000531588.1
ENST00000285013.6
SLFN13
schlafen family member 13
chr13_-_45768841 0.02 ENST00000379108.1
KCTD4
potassium channel tetramerization domain containing 4
chr22_+_42229100 0.02 ENST00000361204.4
SREBF2
sterol regulatory element binding transcription factor 2
chr1_+_218458625 0.02 ENST00000366932.3
RRP15
ribosomal RNA processing 15 homolog (S. cerevisiae)
chr8_-_145013711 0.02 ENST00000345136.3
PLEC
plectin
chr22_+_20067738 0.02 ENST00000351989.3
ENST00000383024.2
DGCR8
DGCR8 microprocessor complex subunit
chr10_+_99609996 0.02 ENST00000370602.1
GOLGA7B
golgin A7 family, member B
chr4_-_157892498 0.02 ENST00000502773.1
PDGFC
platelet derived growth factor C
chr1_+_53527854 0.02 ENST00000371500.3
ENST00000395871.2
ENST00000312553.5
PODN
podocan
chrX_-_107681633 0.01 ENST00000394872.2
ENST00000334504.7
COL4A6
collagen, type IV, alpha 6
chrX_+_12156582 0.01 ENST00000380682.1
FRMPD4
FERM and PDZ domain containing 4
chr16_-_66730583 0.01 ENST00000330687.4
ENST00000394106.2
ENST00000563952.1
CMTM4
CKLF-like MARVEL transmembrane domain containing 4
chr9_+_34958254 0.01 ENST00000242315.3
KIAA1045
KIAA1045
chr12_-_49110613 0.01 ENST00000261900.3
CCNT1
cyclin T1
chr7_+_145813453 0.01 ENST00000361727.3
CNTNAP2
contactin associated protein-like 2
chr10_-_72043432 0.01 ENST00000277942.6
NPFFR1
neuropeptide FF receptor 1
chr3_-_133614597 0.01 ENST00000285208.4
ENST00000460865.3
RAB6B
RAB6B, member RAS oncogene family

Network of associatons between targets according to the STRING database.

First level regulatory network of CUGGCUG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0010693 apoptotic process involved in outflow tract morphogenesis(GO:0003275) negative regulation of alkaline phosphatase activity(GO:0010693) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.1 0.3 GO:0033159 negative regulation of protein import into nucleus, translocation(GO:0033159)
0.1 0.4 GO:0072674 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.1 0.2 GO:1902534 single-organism membrane invagination(GO:1902534)
0.1 0.4 GO:0003431 growth plate cartilage chondrocyte development(GO:0003431)
0.1 0.3 GO:0061767 negative regulation of lung blood pressure(GO:0061767)
0.0 0.5 GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014)
0.0 0.2 GO:0060611 mammary gland fat development(GO:0060611) positive regulation of macrophage colony-stimulating factor signaling pathway(GO:1902228) positive regulation of response to macrophage colony-stimulating factor(GO:1903971) positive regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903974) positive regulation of microglial cell migration(GO:1904141)
0.0 0.1 GO:0031548 regulation of brain-derived neurotrophic factor receptor signaling pathway(GO:0031548)
0.0 0.1 GO:0030037 actin filament reorganization involved in cell cycle(GO:0030037)
0.0 0.1 GO:2000118 regulation of sodium-dependent phosphate transport(GO:2000118)
0.0 0.1 GO:0032911 negative regulation of transforming growth factor beta1 production(GO:0032911)
0.0 0.1 GO:1990927 short-term synaptic potentiation(GO:1990926) calcium ion regulated lysosome exocytosis(GO:1990927)
0.0 0.3 GO:0021957 corticospinal tract morphogenesis(GO:0021957)
0.0 0.1 GO:0035617 stress granule disassembly(GO:0035617)
0.0 0.1 GO:0002352 B cell negative selection(GO:0002352) post-embryonic camera-type eye morphogenesis(GO:0048597)
0.0 0.1 GO:0035963 cellular response to interleukin-13(GO:0035963)
0.0 0.1 GO:0090625 mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
0.0 0.1 GO:0003050 regulation of systemic arterial blood pressure by atrial natriuretic peptide(GO:0003050)
0.0 0.1 GO:0036324 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324) negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
0.0 0.1 GO:0031064 negative regulation of histone deacetylation(GO:0031064)
0.0 0.1 GO:1904674 positive regulation of somatic stem cell population maintenance(GO:1904674)
0.0 0.2 GO:0002934 desmosome organization(GO:0002934)
0.0 0.1 GO:0071393 cellular response to progesterone stimulus(GO:0071393)
0.0 0.1 GO:0033031 positive regulation of neutrophil apoptotic process(GO:0033031)
0.0 0.1 GO:1990928 response to amino acid starvation(GO:1990928)
0.0 0.1 GO:0090170 regulation of Golgi inheritance(GO:0090170)
0.0 0.0 GO:0042271 susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)
0.0 0.2 GO:0051451 myoblast migration(GO:0051451)
0.0 0.0 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.1 GO:0072069 thick ascending limb development(GO:0072023) DCT cell differentiation(GO:0072069) metanephric thick ascending limb development(GO:0072233) metanephric DCT cell differentiation(GO:0072240)
0.0 0.1 GO:0048251 elastic fiber assembly(GO:0048251)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0036195 muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195)
0.0 0.2 GO:1990682 CSF1-CSF1R complex(GO:1990682)
0.0 0.3 GO:0071144 SMAD2-SMAD3 protein complex(GO:0071144)
0.0 0.1 GO:1990032 parallel fiber(GO:1990032)
0.0 0.4 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.0 0.2 GO:0044194 cytolytic granule(GO:0044194)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0042328 heparan sulfate N-acetylglucosaminyltransferase activity(GO:0042328)
0.1 0.2 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.1 0.3 GO:0031962 mineralocorticoid receptor binding(GO:0031962)
0.0 0.3 GO:0004118 cGMP-stimulated cyclic-nucleotide phosphodiesterase activity(GO:0004118)
0.0 0.1 GO:0098808 mRNA cap binding(GO:0098808)
0.0 0.2 GO:0005157 macrophage colony-stimulating factor receptor binding(GO:0005157)
0.0 0.1 GO:0004720 protein-lysine 6-oxidase activity(GO:0004720)
0.0 0.4 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.1 GO:0004487 methylenetetrahydrofolate dehydrogenase (NAD+) activity(GO:0004487)
0.0 0.1 GO:0070984 SET domain binding(GO:0070984)
0.0 0.1 GO:0001517 N-acetylglucosamine 6-O-sulfotransferase activity(GO:0001517)
0.0 0.1 GO:0004999 vasoactive intestinal polypeptide receptor activity(GO:0004999)
0.0 0.1 GO:0005237 inhibitory extracellular ligand-gated ion channel activity(GO:0005237)
0.0 0.1 GO:0048403 brain-derived neurotrophic factor binding(GO:0048403)
0.0 0.1 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.0 0.1 GO:0016286 small conductance calcium-activated potassium channel activity(GO:0016286)
0.0 0.0 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.1 GO:0015277 kainate selective glutamate receptor activity(GO:0015277)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 SA MMP CYTOKINE CONNECTION Cytokines can induce activation of matrix metalloproteinases, which degrade extracellular matrix.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME HS GAG BIOSYNTHESIS Genes involved in HS-GAG biosynthesis
0.0 0.4 REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING Genes involved in Downregulation of TGF-beta receptor signaling