Inflammatory response time course, HUVEC (Wada et al., 2009)
Name | miRBASE accession |
---|---|
hsa-miR-9-5p
|
MIMAT0000441 |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr6_-_82462425 Show fit | 1.31 |
ENST00000369754.3
ENST00000320172.6 ENST00000369756.3 |
family with sequence similarity 46, member A |
|
chr5_-_131826457 Show fit | 1.28 |
ENST00000437654.1
ENST00000245414.4 |
interferon regulatory factor 1 |
|
chr16_-_65155833 Show fit | 1.19 |
ENST00000566827.1
ENST00000394156.3 ENST00000562998.1 |
cadherin 11, type 2, OB-cadherin (osteoblast) |
|
chr1_-_120612240 Show fit | 1.19 |
ENST00000256646.2
|
notch 2 |
|
chr2_-_208030647 Show fit | 1.09 |
ENST00000309446.6
|
Kruppel-like factor 7 (ubiquitous) |
|
chr9_+_116917807 Show fit | 1.07 |
ENST00000356083.3
|
collagen, type XXVII, alpha 1 |
|
chr6_+_116601265 Show fit | 0.95 |
ENST00000452085.3
|
dermatan sulfate epimerase |
|
chr21_-_37838739 Show fit | 0.92 |
ENST00000399139.1
|
claudin 14 |
|
chr5_+_135364584 Show fit | 0.91 |
ENST00000442011.2
ENST00000305126.8 |
transforming growth factor, beta-induced, 68kDa |
|
chr1_+_65613217 Show fit | 0.90 |
ENST00000545314.1
|
adenylate kinase 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.4 | GO:0003431 | growth plate cartilage chondrocyte development(GO:0003431) |
0.0 | 1.4 | GO:0032456 | endocytic recycling(GO:0032456) |
0.3 | 1.3 | GO:2000564 | CD8-positive, alpha-beta T cell proliferation(GO:0035740) regulation of CD8-positive, alpha-beta T cell proliferation(GO:2000564) |
0.1 | 1.2 | GO:0061314 | Notch signaling involved in heart development(GO:0061314) |
0.1 | 1.2 | GO:0021957 | corticospinal tract morphogenesis(GO:0021957) |
0.4 | 1.1 | GO:0060278 | regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279) |
0.1 | 1.0 | GO:2000766 | negative regulation of cytoplasmic translation(GO:2000766) |
0.1 | 0.9 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
0.1 | 0.9 | GO:0046940 | nucleoside monophosphate phosphorylation(GO:0046940) |
0.0 | 0.9 | GO:0030208 | dermatan sulfate biosynthetic process(GO:0030208) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | GO:0055038 | recycling endosome membrane(GO:0055038) |
0.1 | 1.2 | GO:0032433 | filopodium tip(GO:0032433) |
0.1 | 1.1 | GO:0005583 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 1.1 | GO:0002102 | podosome(GO:0002102) |
0.0 | 1.1 | GO:0005811 | lipid particle(GO:0005811) |
0.3 | 0.9 | GO:0043511 | inhibin complex(GO:0043511) inhibin A complex(GO:0043512) |
0.0 | 0.9 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 0.9 | GO:0034707 | chloride channel complex(GO:0034707) |
0.0 | 0.8 | GO:1990124 | messenger ribonucleoprotein complex(GO:1990124) |
0.0 | 0.7 | GO:0042101 | T cell receptor complex(GO:0042101) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.0 | 1.3 | GO:0070888 | E-box binding(GO:0070888) |
0.2 | 1.2 | GO:0038049 | transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049) |
0.0 | 1.2 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.3 | 0.9 | GO:0070699 | type II activin receptor binding(GO:0070699) |
0.2 | 0.9 | GO:0047757 | chondroitin-glucuronate 5-epimerase activity(GO:0047757) |
0.2 | 0.9 | GO:0046899 | nucleoside triphosphate adenylate kinase activity(GO:0046899) |
0.1 | 0.9 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.0 | 0.9 | GO:0050840 | extracellular matrix binding(GO:0050840) |
0.1 | 0.8 | GO:0004656 | procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.0 | PID IFNG PATHWAY | IFN-gamma pathway |
0.0 | 1.5 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.0 | 1.5 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.3 | PID ALK1 PATHWAY | ALK1 signaling events |
0.0 | 1.3 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.2 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 1.1 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 1.0 | ST G ALPHA S PATHWAY | G alpha s Pathway |
0.0 | 0.9 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 0.8 | PID RHOA PATHWAY | RhoA signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.4 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.0 | 1.4 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.3 | REACTOME TRAF6 MEDIATED IRF7 ACTIVATION | Genes involved in TRAF6 mediated IRF7 activation |
0.0 | 1.3 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 1.2 | REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING | Genes involved in Downregulation of TGF-beta receptor signaling |
0.1 | 1.1 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
0.0 | 1.1 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.0 | REACTOME GRB2 SOS PROVIDES LINKAGE TO MAPK SIGNALING FOR INTERGRINS | Genes involved in GRB2:SOS provides linkage to MAPK signaling for Intergrins |
0.0 | 0.9 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 0.9 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |