Inflammatory response time course, HUVEC (Wada et al., 2009)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
DBP | hg19_v2_chr19_-_49140692_49140709 | 0.40 | 4.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_61547405 Show fit | 3.50 |
ENST00000371189.4
|
nuclear factor I/A |
|
chr3_+_141105705 Show fit | 2.56 |
ENST00000513258.1
|
zinc finger and BTB domain containing 38 |
|
chr1_+_114522049 Show fit | 2.12 |
ENST00000369551.1
ENST00000320334.4 |
olfactomedin-like 3 |
|
chr3_-_52479043 Show fit | 2.05 |
ENST00000231721.2
ENST00000475739.1 |
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G |
|
chr1_+_61547894 Show fit | 2.02 |
ENST00000403491.3
|
nuclear factor I/A |
|
chr4_-_186732048 Show fit | 1.93 |
ENST00000448662.2
ENST00000439049.1 ENST00000420158.1 ENST00000431808.1 ENST00000319471.9 |
sorbin and SH3 domain containing 2 |
|
chr4_-_16900410 Show fit | 1.85 |
ENST00000304523.5
|
LIM domain binding 2 |
|
chr4_-_16900184 Show fit | 1.85 |
ENST00000515064.1
|
LIM domain binding 2 |
|
chr4_-_16900217 Show fit | 1.84 |
ENST00000441778.2
|
LIM domain binding 2 |
|
chr4_-_16900242 Show fit | 1.83 |
ENST00000502640.1
ENST00000506732.1 |
LIM domain binding 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 7.2 | GO:0010669 | epithelial structure maintenance(GO:0010669) |
0.2 | 6.7 | GO:0072189 | ureter development(GO:0072189) |
0.0 | 3.1 | GO:0048813 | dendrite morphogenesis(GO:0048813) |
0.0 | 2.5 | GO:0007286 | spermatid development(GO:0007286) |
0.0 | 2.3 | GO:1904837 | beta-catenin-TCF complex assembly(GO:1904837) |
0.5 | 2.1 | GO:0050928 | negative regulation of positive chemotaxis(GO:0050928) |
0.1 | 1.9 | GO:0061049 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.0 | 1.8 | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome(GO:0000381) |
0.2 | 1.7 | GO:0035331 | negative regulation of hippo signaling(GO:0035331) |
0.2 | 1.6 | GO:0034350 | regulation of glial cell apoptotic process(GO:0034350) negative regulation of glial cell apoptotic process(GO:0034351) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.1 | GO:0005667 | transcription factor complex(GO:0005667) |
0.0 | 4.3 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 3.0 | GO:0071564 | npBAF complex(GO:0071564) |
0.2 | 1.5 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
0.1 | 1.5 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.1 | 1.5 | GO:0031235 | intrinsic component of the cytoplasmic side of the plasma membrane(GO:0031235) |
0.1 | 1.4 | GO:0071953 | elastic fiber(GO:0071953) |
0.0 | 0.7 | GO:0043220 | Schmidt-Lanterman incisure(GO:0043220) |
0.0 | 0.5 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.0 | 0.5 | GO:0032045 | guanyl-nucleotide exchange factor complex(GO:0032045) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.8 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.7 | 7.4 | GO:0030274 | LIM domain binding(GO:0030274) |
0.1 | 4.0 | GO:0008327 | methyl-CpG binding(GO:0008327) |
0.0 | 3.1 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.0 | 2.4 | GO:0070491 | repressing transcription factor binding(GO:0070491) |
0.1 | 1.9 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 1.9 | GO:0005178 | integrin binding(GO:0005178) |
0.3 | 1.6 | GO:0004699 | calcium-independent protein kinase C activity(GO:0004699) |
0.1 | 1.5 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
0.1 | 1.5 | GO:0004691 | cAMP-dependent protein kinase activity(GO:0004691) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 5.4 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 3.3 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.0 | 2.9 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
0.0 | 1.6 | PID NFAT 3PATHWAY | Role of Calcineurin-dependent NFAT signaling in lymphocytes |
0.0 | 1.5 | PID IL3 PATHWAY | IL3-mediated signaling events |
0.0 | 1.5 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.5 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.1 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.0 | 1.0 | PID NFKAPPAB ATYPICAL PATHWAY | Atypical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 2.3 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.1 | 2.1 | REACTOME TIE2 SIGNALING | Genes involved in Tie2 Signaling |
0.0 | 1.8 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
0.0 | 1.6 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.0 | 1.5 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.0 | 1.0 | REACTOME SIGNALING BY NOTCH1 | Genes involved in Signaling by NOTCH1 |
0.0 | 0.7 | REACTOME NOTCH HLH TRANSCRIPTION PATHWAY | Genes involved in Notch-HLH transcription pathway |
0.0 | 0.7 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.6 | REACTOME THE ROLE OF NEF IN HIV1 REPLICATION AND DISEASE PATHOGENESIS | Genes involved in The role of Nef in HIV-1 replication and disease pathogenesis |