Inflammatory response time course, HUVEC (Wada et al., 2009)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ERG | hg19_v2_chr21_-_40033618_40033712 | 0.78 | 4.1e-06 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_+_53443680 Show fit | 6.49 |
ENST00000314250.6
ENST00000451358.1 |
tensin like C1 domain containing phosphatase (tensin 2) |
|
chr12_+_53443963 Show fit | 6.43 |
ENST00000546602.1
ENST00000552570.1 ENST00000549700.1 |
tensin like C1 domain containing phosphatase (tensin 2) |
|
chr5_+_61874562 Show fit | 5.50 |
ENST00000334994.5
ENST00000409534.1 |
leucine rich repeat containing 70 importin 11 |
|
chr9_-_134145880 Show fit | 4.91 |
ENST00000372269.3
ENST00000464831.1 |
family with sequence similarity 78, member A |
|
chr14_-_38725573 Show fit | 4.58 |
ENST00000342213.2
|
C-type lectin domain family 14, member A |
|
chr4_-_89152474 Show fit | 4.33 |
ENST00000515655.1
|
ATP-binding cassette, sub-family G (WHITE), member 2 |
|
chr14_+_24867992 Show fit | 4.31 |
ENST00000382554.3
|
NYN domain and retroviral integrase containing |
|
chr2_-_225266743 Show fit | 4.14 |
ENST00000409685.3
|
family with sequence similarity 124B |
|
chr2_-_225266711 Show fit | 4.13 |
ENST00000389874.3
|
family with sequence similarity 124B |
|
chr1_+_35258592 Show fit | 4.11 |
ENST00000342280.4
ENST00000450137.1 |
gap junction protein, alpha 4, 37kDa |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 15.2 | GO:0010669 | epithelial structure maintenance(GO:0010669) |
3.8 | 11.3 | GO:1902846 | regulation of spindle elongation(GO:0032887) regulation of mitotic spindle elongation(GO:0032888) anastral spindle assembly(GO:0055048) protein localization to spindle pole body(GO:0071988) regulation of protein localization to spindle pole body(GO:1902363) positive regulation of protein localization to spindle pole body(GO:1902365) positive regulation of mitotic spindle elongation(GO:1902846) |
0.4 | 11.1 | GO:0043101 | purine-containing compound salvage(GO:0043101) |
0.1 | 7.6 | GO:0006968 | cellular defense response(GO:0006968) |
0.2 | 7.5 | GO:0003301 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
1.2 | 7.4 | GO:1903758 | regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903756) negative regulation of transcription from RNA polymerase II promoter by histone modification(GO:1903758) |
1.0 | 7.3 | GO:0098881 | exocytic insertion of neurotransmitter receptor to plasma membrane(GO:0098881) exocytic insertion of neurotransmitter receptor to postsynaptic membrane(GO:0098967) |
0.5 | 6.3 | GO:1900028 | negative regulation of ruffle assembly(GO:1900028) |
0.0 | 6.1 | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane(GO:0006614) |
0.9 | 6.0 | GO:0097338 | response to clozapine(GO:0097338) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.9 | GO:0005667 | transcription factor complex(GO:0005667) |
3.8 | 11.3 | GO:0055028 | cortical microtubule(GO:0055028) |
1.8 | 11.0 | GO:1902560 | GMP reductase complex(GO:1902560) |
0.1 | 9.9 | GO:0001725 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.4 | 9.1 | GO:0001931 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
0.0 | 8.1 | GO:0030018 | Z disc(GO:0030018) |
0.1 | 7.5 | GO:0005871 | kinesin complex(GO:0005871) |
0.3 | 7.4 | GO:0005952 | cAMP-dependent protein kinase complex(GO:0005952) |
0.1 | 7.4 | GO:0030173 | integral component of Golgi membrane(GO:0030173) |
1.8 | 7.0 | GO:1990796 | photoreceptor cell terminal bouton(GO:1990796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 12.9 | GO:0030274 | LIM domain binding(GO:0030274) |
0.4 | 12.4 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.8 | 11.5 | GO:0051011 | microtubule minus-end binding(GO:0051011) |
1.8 | 11.0 | GO:0016657 | GMP reductase activity(GO:0003920) oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor(GO:0016657) |
0.1 | 9.7 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.0 | 8.5 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.0 | 8.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.1 | 7.6 | GO:0001106 | RNA polymerase II transcription corepressor activity(GO:0001106) |
0.8 | 7.2 | GO:0097642 | calcitonin family receptor activity(GO:0097642) |
0.6 | 6.5 | GO:0050544 | arachidonic acid binding(GO:0050544) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 16.9 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 8.3 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 8.2 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 8.0 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 7.6 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 7.5 | PID INTEGRIN A4B1 PATHWAY | Alpha4 beta1 integrin signaling events |
0.1 | 5.6 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 5.0 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.1 | 4.6 | PID ALK1 PATHWAY | ALK1 signaling events |
0.2 | 4.2 | PID VEGF VEGFR PATHWAY | VEGF and VEGFR signaling network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 11.3 | REACTOME RECRUITMENT OF NUMA TO MITOTIC CENTROSOMES | Genes involved in Recruitment of NuMA to mitotic centrosomes |
0.4 | 11.1 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 10.6 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.4 | 9.9 | REACTOME PROTEOLYTIC CLEAVAGE OF SNARE COMPLEX PROTEINS | Genes involved in Proteolytic cleavage of SNARE complex proteins |
0.2 | 7.3 | REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB | Genes involved in PKA-mediated phosphorylation of CREB |
0.0 | 7.3 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 5.7 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.1 | 5.5 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 5.2 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.1 | 5.1 | REACTOME AMYLOIDS | Genes involved in Amyloids |