Inflammatory response time course, HUVEC (Wada et al., 2009)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXA1 | hg19_v2_chr14_-_38064198_38064239 | -0.11 | 6.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_18496957 Show fit | 1.18 |
ENST00000252809.3
|
growth differentiation factor 15 |
|
chr2_+_150187020 Show fit | 1.07 |
ENST00000334166.4
|
LY6/PLAUR domain containing 6 |
|
chr22_+_21128167 Show fit | 0.88 |
ENST00000215727.5
|
serpin peptidase inhibitor, clade D (heparin cofactor), member 1 |
|
chr18_+_3449330 Show fit | 0.82 |
ENST00000549253.1
|
TGFB-induced factor homeobox 1 |
|
chr9_+_126131131 Show fit | 0.76 |
ENST00000373629.2
|
crumbs homolog 2 (Drosophila) |
|
chr10_-_90751038 Show fit | 0.70 |
ENST00000458159.1
ENST00000415557.1 ENST00000458208.1 |
actin, alpha 2, smooth muscle, aorta |
|
chr11_-_108464465 Show fit | 0.69 |
ENST00000525344.1
|
exophilin 5 |
|
chr1_-_111743285 Show fit | 0.68 |
ENST00000357640.4
|
DENN/MADD domain containing 2D |
|
chr1_-_201096312 Show fit | 0.66 |
ENST00000449188.2
|
achaete-scute family bHLH transcription factor 5 |
|
chr17_+_74372662 Show fit | 0.66 |
ENST00000591651.1
ENST00000545180.1 |
sphingosine kinase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0071420 | cellular response to histamine(GO:0071420) |
0.0 | 1.2 | GO:1901741 | positive regulation of myoblast fusion(GO:1901741) |
0.0 | 1.1 | GO:0099601 | regulation of neurotransmitter receptor activity(GO:0099601) |
0.3 | 1.0 | GO:1903691 | positive regulation of wound healing, spreading of epidermal cells(GO:1903691) |
0.1 | 1.0 | GO:0071985 | multivesicular body sorting pathway(GO:0071985) |
0.1 | 0.9 | GO:0008218 | bioluminescence(GO:0008218) |
0.1 | 0.8 | GO:0014028 | notochord formation(GO:0014028) |
0.2 | 0.7 | GO:0046521 | sphingoid catabolic process(GO:0046521) |
0.1 | 0.7 | GO:0090131 | mesenchyme migration(GO:0090131) |
0.1 | 0.7 | GO:0001867 | complement activation, lectin pathway(GO:0001867) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.8 | GO:1902711 | GABA-A receptor complex(GO:1902711) |
0.1 | 0.7 | GO:0030485 | smooth muscle contractile fiber(GO:0030485) |
0.0 | 0.6 | GO:0001891 | phagocytic cup(GO:0001891) |
0.0 | 0.6 | GO:0030867 | rough endoplasmic reticulum membrane(GO:0030867) |
0.2 | 0.5 | GO:0097444 | spine apparatus(GO:0097444) |
0.0 | 0.5 | GO:0030904 | retromer complex(GO:0030904) |
0.1 | 0.4 | GO:0097454 | Schwann cell microvillus(GO:0097454) |
0.1 | 0.4 | GO:1990357 | terminal web(GO:1990357) |
0.0 | 0.4 | GO:0005579 | membrane attack complex(GO:0005579) |
0.0 | 0.4 | GO:0033093 | Weibel-Palade body(GO:0033093) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) |
0.0 | 1.2 | GO:0005160 | transforming growth factor beta receptor binding(GO:0005160) |
0.0 | 1.2 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
0.4 | 1.1 | GO:0030550 | acetylcholine receptor inhibitor activity(GO:0030550) |
0.1 | 0.8 | GO:0019828 | aspartic-type endopeptidase inhibitor activity(GO:0019828) |
0.0 | 0.8 | GO:0070410 | co-SMAD binding(GO:0070410) |
0.1 | 0.7 | GO:0008481 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
0.2 | 0.6 | GO:0033823 | procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823) |
0.0 | 0.6 | GO:0005537 | mannose binding(GO:0005537) |
0.0 | 0.6 | GO:0004890 | GABA-A receptor activity(GO:0004890) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 1.1 | PID ECADHERIN STABILIZATION PATHWAY | Stabilization and expansion of the E-cadherin adherens junction |
0.0 | 0.8 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.7 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.0 | 0.6 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 0.6 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 0.5 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.8 | REACTOME LIGAND GATED ION CHANNEL TRANSPORT | Genes involved in Ligand-gated ion channel transport |
0.0 | 1.1 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.0 | 0.8 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.0 | 0.8 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |
0.0 | 0.8 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 0.7 | REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS | Genes involved in Association of TriC/CCT with target proteins during biosynthesis |
0.1 | 0.5 | REACTOME DOWNSTREAM SIGNAL TRANSDUCTION | Genes involved in Downstream signal transduction |
0.0 | 0.5 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.0 | 0.4 | REACTOME ROLE OF SECOND MESSENGERS IN NETRIN1 SIGNALING | Genes involved in Role of second messengers in netrin-1 signaling |
0.0 | 0.4 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |