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Inflammatory response time course, HUVEC (Wada et al., 2009)

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Results for GAGAACU

Z-value: 0.05

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miRNA associated with seed GAGAACU

NamemiRBASE accession
MIMAT0000449
MIMAT0002809
MIMAT0028216

Activity profile of GAGAACU motif

Sorted Z-values of GAGAACU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr6_+_116832789 0.04 ENST00000368599.3
family with sequence similarity 26, member E
chr1_+_25943959 0.02 ENST00000374332.4
mannosidase, alpha, class 1C, member 1
chr3_-_52479043 0.01 ENST00000231721.2
ENST00000475739.1
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G
chr2_-_208030647 0.01 ENST00000309446.6
Kruppel-like factor 7 (ubiquitous)
chr22_-_37915535 0.01 ENST00000403299.1
caspase recruitment domain family, member 10
chr18_+_11981427 0.01 ENST00000269159.3
inositol(myo)-1(or 4)-monophosphatase 2
chr15_-_52821247 0.01 ENST00000399231.3
ENST00000399233.2
myosin VA (heavy chain 12, myoxin)
chrX_-_77395186 0.01 ENST00000341864.5
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
chr8_-_89339705 0.01 ENST00000286614.6
matrix metallopeptidase 16 (membrane-inserted)
chr17_-_30669138 0.01 ENST00000225805.4
ENST00000577809.1
chromosome 17 open reading frame 75
chr1_+_66999799 0.01 ENST00000371035.3
ENST00000371036.3
ENST00000371037.4
SH3-domain GRB2-like (endophilin) interacting protein 1
chr3_+_11314099 0.01 ENST00000446450.2
ENST00000354956.5
ENST00000354449.3
ENST00000419112.1
autophagy related 7
chr13_+_27131887 0.01 ENST00000335327.5
WAS protein family, member 3
chr3_-_194090460 0.01 ENST00000428839.1
ENST00000347624.3
leucine rich repeat containing 15
chr9_+_71320596 0.00 ENST00000265382.3
phosphatidylinositol-4-phosphate 5-kinase, type I, beta
chr18_+_19749386 0.00 ENST00000269216.3
GATA binding protein 6
chr1_-_179198702 0.00 ENST00000502732.1
c-abl oncogene 2, non-receptor tyrosine kinase
chr2_+_113239710 0.00 ENST00000233336.6
tubulin tyrosine ligase
chr9_-_33264676 0.00 ENST00000472232.3
ENST00000379704.2
BCL2-associated athanogene
chrX_-_41782249 0.00 ENST00000442742.2
ENST00000421587.2
ENST00000378166.4
ENST00000318588.9
ENST00000361962.4
calcium/calmodulin-dependent serine protein kinase (MAGUK family)
chr4_-_71705590 0.00 ENST00000254799.6
G-rich RNA sequence binding factor 1
chr3_-_164913777 0.00 ENST00000475390.1
SLIT and NTRK-like family, member 3
chr7_+_30323923 0.00 ENST00000323037.4
zinc and ring finger 2
chr11_+_61159832 0.00 ENST00000334888.5
ENST00000398979.3
transmembrane protein 216
chr17_-_8055747 0.00 ENST00000317276.4
ENST00000581703.1
period circadian clock 1
chr5_+_10353780 0.00 ENST00000449913.2
ENST00000503788.1
ENST00000274140.5
membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
chr14_-_53619816 0.00 ENST00000323669.5
ENST00000395606.1
ENST00000357758.3
DDHD domain containing 1
chr16_-_69368774 0.00 ENST00000562949.1
Conserved oligomeric Golgi complex subunit 8
chr16_-_69364467 0.00 ENST00000288022.1
peptide deformylase (mitochondrial)
chr13_+_100153665 0.00 ENST00000376387.4
transmembrane 9 superfamily member 2
chr14_-_68141535 0.00 ENST00000554659.1
vesicle transport through interaction with t-SNAREs 1B
chr4_+_85504075 0.00 ENST00000295887.5
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
chr2_+_85198216 0.00 ENST00000456682.1
ENST00000409785.4
potassium channel modulatory factor 1
chr4_-_120225600 0.00 ENST00000399075.4
chromosome 4 open reading frame 3
chr6_+_160390102 0.00 ENST00000356956.1
insulin-like growth factor 2 receptor
chr22_+_29279552 0.00 ENST00000544604.2
zinc and ring finger 3
chr6_+_149887377 0.00 ENST00000367419.5
glycoprotein integral membrane 1
chr2_-_166930131 0.00 ENST00000303395.4
ENST00000409050.1
ENST00000423058.2
ENST00000375405.3
sodium channel, voltage-gated, type I, alpha subunit
chr12_+_119419294 0.00 ENST00000267260.4
serine/arginine repetitive matrix 4
chr8_+_56014949 0.00 ENST00000327381.6
XK, Kell blood group complex subunit-related family, member 4
chr1_+_32573636 0.00 ENST00000373625.3
karyopherin alpha 6 (importin alpha 7)
chr1_-_245134273 0.00 ENST00000607453.1
Uncharacterized protein
chr1_+_32930647 0.00 ENST00000609129.1
zinc finger and BTB domain containing 8B
chr6_+_76458909 0.00 ENST00000369981.3
ENST00000369985.4
myosin VI
chr3_-_125094093 0.00 ENST00000484491.1
ENST00000492394.1
ENST00000471196.1
ENST00000468369.1
ENST00000544464.1
ENST00000485866.1
ENST00000360647.4
zinc finger protein 148
chr6_-_90121938 0.00 ENST00000369415.4
Ras-related GTP binding D

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAACU

PNG image of the network

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Gene Ontology Analysis