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Inflammatory response time course, HUVEC (Wada et al., 2009)
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Results for GAUAUGU
Z-value: 0.15
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miRNA associated with seed GAUAUGU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-190a-5p
|
MIMAT0000458 |
|
hsa-miR-190b
|
MIMAT0004929 |
Activity profile of GAUAUGU motif
Sorted Z-values of GAUAUGU motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr10_-_131762105 | 0.37 |
ENST00000368648.3
ENST00000355311.5 |
EBF3
|
early B-cell factor 3 |
| chr12_+_27396901 | 0.35 |
ENST00000541191.1
ENST00000389032.3 |
STK38L
|
serine/threonine kinase 38 like |
| chr2_+_148778570 | 0.25 |
ENST00000407073.1
|
MBD5
|
methyl-CpG binding domain protein 5 |
| chr12_-_31744031 | 0.23 |
ENST00000389082.5
|
DENND5B
|
DENN/MADD domain containing 5B |
| chr18_+_42260861 | 0.13 |
ENST00000282030.5
|
SETBP1
|
SET binding protein 1 |
| chr2_+_179059365 | 0.10 |
ENST00000190611.4
|
OSBPL6
|
oxysterol binding protein-like 6 |
| chrX_-_33146477 | 0.09 |
ENST00000378677.2
|
DMD
|
dystrophin |
| chr22_+_40573921 | 0.08 |
ENST00000454349.2
ENST00000335727.9 |
TNRC6B
|
trinucleotide repeat containing 6B |
| chr1_+_61547894 | 0.07 |
ENST00000403491.3
|
NFIA
|
nuclear factor I/A |
| chr8_-_93115445 | 0.06 |
ENST00000523629.1
|
RUNX1T1
|
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) |
| chr3_-_126076264 | 0.06 |
ENST00000296233.3
|
KLF15
|
Kruppel-like factor 15 |
| chr18_-_72921303 | 0.06 |
ENST00000322342.3
|
ZADH2
|
zinc binding alcohol dehydrogenase domain containing 2 |
| chr7_+_24612935 | 0.05 |
ENST00000222644.5
|
MPP6
|
membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) |
| chr3_+_11314099 | 0.05 |
ENST00000446450.2
ENST00000354956.5 ENST00000354449.3 ENST00000419112.1 |
ATG7
|
autophagy related 7 |
| chr21_-_39870339 | 0.04 |
ENST00000429727.2
ENST00000398905.1 ENST00000398907.1 ENST00000453032.2 ENST00000288319.7 |
ERG
|
v-ets avian erythroblastosis virus E26 oncogene homolog |
| chr8_-_95961578 | 0.04 |
ENST00000448464.2
ENST00000342697.4 |
TP53INP1
|
tumor protein p53 inducible nuclear protein 1 |
| chr20_-_48099182 | 0.03 |
ENST00000371741.4
|
KCNB1
|
potassium voltage-gated channel, Shab-related subfamily, member 1 |
| chr18_-_53255766 | 0.03 |
ENST00000566286.1
ENST00000564999.1 ENST00000566279.1 ENST00000354452.3 ENST00000356073.4 |
TCF4
|
transcription factor 4 |
| chr10_+_125425871 | 0.03 |
ENST00000284674.1
|
GPR26
|
G protein-coupled receptor 26 |
| chr12_-_118797475 | 0.03 |
ENST00000541786.1
ENST00000419821.2 ENST00000541878.1 |
TAOK3
|
TAO kinase 3 |
| chr14_+_79745746 | 0.02 |
ENST00000281127.7
|
NRXN3
|
neurexin 3 |
| chr15_+_36887069 | 0.02 |
ENST00000566807.1
ENST00000567389.1 ENST00000562877.1 |
C15orf41
|
chromosome 15 open reading frame 41 |
| chr15_-_68498376 | 0.02 |
ENST00000540479.1
ENST00000395465.3 |
CALML4
|
calmodulin-like 4 |
| chr5_+_175223313 | 0.02 |
ENST00000359546.4
|
CPLX2
|
complexin 2 |
| chr11_-_70507901 | 0.02 |
ENST00000449833.2
ENST00000357171.3 ENST00000449116.2 |
SHANK2
|
SH3 and multiple ankyrin repeat domains 2 |
| chrX_-_109561294 | 0.01 |
ENST00000372059.2
ENST00000262844.5 |
AMMECR1
|
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 |
| chr15_-_45815005 | 0.01 |
ENST00000261867.4
|
SLC30A4
|
solute carrier family 30 (zinc transporter), member 4 |
| chr12_-_28124903 | 0.01 |
ENST00000395872.1
ENST00000354417.3 ENST00000201015.4 |
PTHLH
|
parathyroid hormone-like hormone |
| chr4_+_128703295 | 0.01 |
ENST00000296464.4
ENST00000508549.1 |
HSPA4L
|
heat shock 70kDa protein 4-like |
| chr5_+_61602055 | 0.01 |
ENST00000381103.2
|
KIF2A
|
kinesin heavy chain member 2A |
| chr8_+_64081118 | 0.01 |
ENST00000539294.1
|
YTHDF3
|
YTH domain family, member 3 |
| chr15_-_52821247 | 0.01 |
ENST00000399231.3
ENST00000399233.2 |
MYO5A
|
myosin VA (heavy chain 12, myoxin) |
| chr7_-_26240357 | 0.01 |
ENST00000354667.4
ENST00000356674.7 |
HNRNPA2B1
|
heterogeneous nuclear ribonucleoprotein A2/B1 |
| chr4_+_99916765 | 0.01 |
ENST00000296411.6
|
METAP1
|
methionyl aminopeptidase 1 |
| chr13_-_103053946 | 0.01 |
ENST00000376131.4
|
FGF14
|
fibroblast growth factor 14 |
| chr19_-_33793430 | 0.01 |
ENST00000498907.2
|
CEBPA
|
CCAAT/enhancer binding protein (C/EBP), alpha |
| chr13_+_49550015 | 0.01 |
ENST00000492622.2
|
FNDC3A
|
fibronectin type III domain containing 3A |
| chr2_-_182545603 | 0.01 |
ENST00000295108.3
|
NEUROD1
|
neuronal differentiation 1 |
| chr4_+_6911171 | 0.01 |
ENST00000448507.1
|
TBC1D14
|
TBC1 domain family, member 14 |
| chr7_+_5085452 | 0.00 |
ENST00000353796.3
ENST00000396912.1 ENST00000396904.2 |
RBAK
RBAK-RBAKDN
|
RB-associated KRAB zinc finger RBAK-RBAKDN readthrough |
| chr16_+_24741013 | 0.00 |
ENST00000315183.7
ENST00000395799.3 |
TNRC6A
|
trinucleotide repeat containing 6A |
| chr11_-_30038490 | 0.00 |
ENST00000328224.6
|
KCNA4
|
potassium voltage-gated channel, shaker-related subfamily, member 4 |
| chr2_+_208394616 | 0.00 |
ENST00000432329.2
ENST00000353267.3 ENST00000445803.1 |
CREB1
|
cAMP responsive element binding protein 1 |
| chr20_+_56964169 | 0.00 |
ENST00000475243.1
|
VAPB
|
VAMP (vesicle-associated membrane protein)-associated protein B and C |
| chr1_+_145470504 | 0.00 |
ENST00000323397.4
|
ANKRD34A
|
ankyrin repeat domain 34A |
Network of associatons between targets according to the STRING database.
First level regulatory network of GAUAUGU
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0060399 | positive regulation of growth hormone receptor signaling pathway(GO:0060399) |
| 0.0 | 0.0 | GO:1902534 | single-organism membrane invagination(GO:1902534) |
| 0.0 | 0.0 | GO:1904760 | myofibroblast differentiation(GO:0036446) regulation of myofibroblast differentiation(GO:1904760) |