Project

Inflammatory response time course, HUVEC (Wada et al., 2009)

Navigation
Downloads

Results for GGACGGA

Z-value: 0.10

Motif logo

miRNA associated with seed GGACGGA

NamemiRBASE accession
MIMAT0000454

Activity profile of GGACGGA motif

Sorted Z-values of GGACGGA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_172756506 0.13 ENST00000265087.4
stanniocalcin 2
chr1_-_57045228 0.06 ENST00000371250.3
phosphatidic acid phosphatase type 2B
chr2_+_120770645 0.05 ENST00000443902.2
erythrocyte membrane protein band 4.1 like 5
chr3_-_147124547 0.04 ENST00000491672.1
ENST00000383075.3
Zic family member 4
chr8_-_141645645 0.04 ENST00000519980.1
ENST00000220592.5
argonaute RISC catalytic component 2
chr4_-_174451370 0.04 ENST00000359562.4
heart and neural crest derivatives expressed 2
chr20_-_31071239 0.03 ENST00000359676.5
chromosome 20 open reading frame 112
chr12_+_53574464 0.03 ENST00000416904.3
zinc finger protein 740
chr11_-_796197 0.02 ENST00000530360.1
ENST00000528606.1
ENST00000320230.5
solute carrier family 25 (mitochondrial carrier: glutamate), member 22
chr6_+_117996621 0.02 ENST00000368494.3
nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
chr12_+_121124599 0.02 ENST00000228506.3
malectin
chr22_-_39268308 0.01 ENST00000407418.3
chromobox homolog 6
chr19_+_18794470 0.01 ENST00000321949.8
ENST00000338797.6
CREB regulated transcription coactivator 1
chr19_+_10982189 0.01 ENST00000327064.4
ENST00000588947.1
coactivator-associated arginine methyltransferase 1
chr11_-_64546202 0.00 ENST00000377390.3
ENST00000227503.9
ENST00000377394.3
ENST00000422298.2
ENST00000334944.5
splicing factor 1
chr19_+_3359561 0.00 ENST00000589123.1
ENST00000346156.5
ENST00000395111.3
ENST00000586919.1
nuclear factor I/C (CCAAT-binding transcription factor)
chr1_-_19229248 0.00 ENST00000375341.3
aldehyde dehydrogenase 4 family, member A1

Network of associatons between targets according to the STRING database.

First level regulatory network of GGACGGA

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.0 0.1 GO:0007509 mesoderm migration involved in gastrulation(GO:0007509)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0098808 mRNA cap binding(GO:0098808)