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Inflammatory response time course, HUVEC (Wada et al., 2009)

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Results for GGAGUGU

Z-value: 0.18

Motif logo

miRNA associated with seed GGAGUGU

NamemiRBASE accession
MIMAT0000421

Activity profile of GGAGUGU motif

Sorted Z-values of GGAGUGU motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_205782304 0.28 ENST00000367137.3
solute carrier family 41 (magnesium transporter), member 1
chr1_+_28586006 0.27 ENST00000253063.3
sestrin 2
chr10_-_74856608 0.18 ENST00000307116.2
ENST00000373008.2
ENST00000412021.2
ENST00000394890.2
ENST00000263556.3
ENST00000440381.1
prolyl 4-hydroxylase, alpha polypeptide I
chr1_-_72748417 0.15 ENST00000357731.5
neuronal growth regulator 1
chr19_-_2456922 0.14 ENST00000582871.1
ENST00000325327.3
lamin B2
chr20_-_31071239 0.12 ENST00000359676.5
chromosome 20 open reading frame 112
chr14_+_33408449 0.12 ENST00000346562.2
ENST00000341321.4
ENST00000548645.1
ENST00000356141.4
ENST00000357798.5
neuronal PAS domain protein 3
chr15_-_72523454 0.10 ENST00000565154.1
ENST00000565184.1
ENST00000389093.3
ENST00000449901.2
ENST00000335181.5
ENST00000319622.6
pyruvate kinase, muscle
chr17_-_27916621 0.10 ENST00000225394.3
G protein-coupled receptor kinase interacting ArfGAP 1
chr3_+_9773409 0.09 ENST00000433861.2
ENST00000424362.1
ENST00000383829.2
ENST00000302054.3
ENST00000420291.1
bromodomain and PHD finger containing, 1
chr1_+_25071848 0.08 ENST00000374379.4
chloride intracellular channel 4
chr4_-_146859623 0.08 ENST00000379448.4
ENST00000513320.1
zinc finger protein 827
chr19_+_46800289 0.08 ENST00000377670.4
hypoxia inducible factor 3, alpha subunit
chr5_+_162864575 0.07 ENST00000512163.1
ENST00000393929.1
ENST00000340828.2
ENST00000511683.2
ENST00000510097.1
ENST00000511490.2
ENST00000510664.1
cyclin G1
chr8_+_102504651 0.07 ENST00000251808.3
ENST00000521085.1
grainyhead-like 2 (Drosophila)
chr8_-_29208183 0.07 ENST00000240100.2
dual specificity phosphatase 4
chr19_-_47291843 0.07 ENST00000542575.2
solute carrier family 1 (neutral amino acid transporter), member 5
chr12_-_56694142 0.06 ENST00000550655.1
ENST00000548567.1
ENST00000551430.2
ENST00000351328.3
citrate synthase
chr10_+_70480963 0.04 ENST00000265872.6
ENST00000535016.1
ENST00000538031.1
ENST00000543719.1
ENST00000539539.1
ENST00000543225.1
ENST00000536012.1
ENST00000494903.2
cell division cycle and apoptosis regulator 1
chr5_+_125758813 0.04 ENST00000285689.3
ENST00000515200.1
GRAM domain containing 3
chr16_+_30077055 0.04 ENST00000564595.2
ENST00000569798.1
aldolase A, fructose-bisphosphate
chr4_-_53525406 0.03 ENST00000451218.2
ENST00000441222.3
ubiquitin specific peptidase 46
chr6_-_45983581 0.03 ENST00000339561.6
chloride intracellular channel 5
chr16_-_31076332 0.03 ENST00000539836.3
ENST00000535577.1
ENST00000442862.2
zinc finger protein 668
chr17_+_41857793 0.03 ENST00000449302.3
chromosome 17 open reading frame 105
chr14_+_23340822 0.03 ENST00000359591.4
low density lipoprotein receptor-related protein 10
chr3_-_187009646 0.03 ENST00000296280.6
ENST00000392470.2
ENST00000169293.6
ENST00000439271.1
ENST00000392472.2
ENST00000392475.2
mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
chr4_-_76598296 0.03 ENST00000395719.3
GTPase activating protein (SH3 domain) binding protein 2
chr8_-_57123815 0.03 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
pleiomorphic adenoma gene 1
chr15_-_83316254 0.02 ENST00000567678.1
ENST00000450751.2
cytoplasmic polyadenylation element binding protein 1
chr20_+_32581452 0.02 ENST00000375114.3
ENST00000448364.1
RALY heterogeneous nuclear ribonucleoprotein
chrX_-_135056216 0.02 ENST00000305963.2
membrane magnesium transporter 1
chr10_-_61666267 0.02 ENST00000263102.6
coiled-coil domain containing 6
chr6_+_108881012 0.02 ENST00000343882.6
forkhead box O3
chr2_-_219925189 0.02 ENST00000295731.6
indian hedgehog
chr6_+_72596604 0.01 ENST00000348717.5
ENST00000517960.1
ENST00000518273.1
ENST00000522291.1
ENST00000521978.1
ENST00000520567.1
ENST00000264839.7
regulating synaptic membrane exocytosis 1
chr15_+_44719394 0.01 ENST00000260327.4
ENST00000396780.1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr1_+_36348790 0.01 ENST00000373204.4
argonaute RISC catalytic component 1
chr8_+_145159376 0.01 ENST00000322428.5
MAF1 homolog (S. cerevisiae)
chr1_-_208417620 0.01 ENST00000367033.3
plexin A2
chr19_+_41816053 0.01 ENST00000269967.3
coiled-coil domain containing 97
chr8_+_16884740 0.01 ENST00000318063.5
mitochondrial calcium uptake family, member 3
chr10_-_23003460 0.01 ENST00000376573.4
phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
chr1_+_16062820 0.01 ENST00000294454.5
solute carrier family 25, member 34
chr1_-_245027833 0.01 ENST00000444376.2
heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
chr2_-_96811170 0.01 ENST00000288943.4
dual specificity phosphatase 2
chr7_+_114055052 0.01 ENST00000462331.1
ENST00000408937.3
ENST00000403559.4
ENST00000350908.4
ENST00000393498.2
ENST00000393495.3
ENST00000378237.3
ENST00000393489.3
forkhead box P2
chrX_-_48901012 0.01 ENST00000315869.7
transcription factor binding to IGHM enhancer 3
chr1_-_149982624 0.01 ENST00000417191.1
ENST00000369135.4
OTU domain containing 7B
chr5_+_96271141 0.01 ENST00000231368.5
leucyl/cystinyl aminopeptidase
chr7_-_95225768 0.01 ENST00000005178.5
pyruvate dehydrogenase kinase, isozyme 4
chr1_-_70820357 0.01 ENST00000370944.4
ENST00000262346.6
ankyrin repeat domain 13C
chr2_+_14772810 0.01 ENST00000295092.2
ENST00000331243.4
family with sequence similarity 84, member A
chr3_+_183967409 0.01 ENST00000324557.4
ENST00000402825.3
endothelin converting enzyme 2
chr14_-_77787198 0.01 ENST00000261534.4
protein-O-mannosyltransferase 2
chr16_-_30381580 0.01 ENST00000409939.3
TBC1 domain family, member 10B
chr5_+_179125907 0.01 ENST00000247461.4
ENST00000452673.2
ENST00000502498.1
ENST00000507307.1
ENST00000513246.1
ENST00000502673.1
ENST00000506654.1
ENST00000512607.2
ENST00000510810.1
calnexin
chr17_-_19880992 0.00 ENST00000395536.3
ENST00000576896.1
ENST00000225737.6
A kinase (PRKA) anchor protein 10
chr5_-_11904152 0.00 ENST00000304623.8
ENST00000458100.2
catenin (cadherin-associated protein), delta 2
chr19_-_8373173 0.00 ENST00000537716.2
ENST00000301458.5
CD320 molecule
chr6_-_35464727 0.00 ENST00000402886.3
TEA domain family member 3
chr17_-_4269768 0.00 ENST00000396981.2
ubiquitin-conjugating enzyme E2G 1
chr1_-_161102421 0.00 ENST00000490843.2
ENST00000368006.3
ENST00000392188.1
ENST00000545495.1
death effector domain containing
chr11_+_119076745 0.00 ENST00000264033.4
Cbl proto-oncogene, E3 ubiquitin protein ligase

Network of associatons between targets according to the STRING database.

First level regulatory network of GGAGUGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0090526 regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.0 0.3 GO:0010961 cellular magnesium ion homeostasis(GO:0010961)
0.0 0.1 GO:0010585 glutamine secretion(GO:0010585) L-glutamine import(GO:0036229) L-glutamine import into cell(GO:1903803)
0.0 0.1 GO:0060672 epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.0 0.2 GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401)
0.0 0.1 GO:0042866 pyruvate biosynthetic process(GO:0042866)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0016222 procollagen-proline 4-dioxygenase complex(GO:0016222)
0.0 0.3 GO:1990316 ATG1/ULK1 kinase complex(GO:1990316)
0.0 0.1 GO:0005638 lamin filament(GO:0005638)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0070728 leucine binding(GO:0070728)
0.0 0.1 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.0 0.2 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798)
0.0 0.1 GO:0004743 pyruvate kinase activity(GO:0004743)
0.0 0.1 GO:0010484 H3 histone acetyltransferase activity(GO:0010484)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)