Inflammatory response time course, HUVEC (Wada et al., 2009)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
PRDM14
|
ENSG00000147596.3 | PR/SET domain 14 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
PRDM14 | hg19_v2_chr8_-_70983506_70983562 | -0.10 | 6.2e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr21_+_26934165 | 1.49 |
ENST00000456917.1
|
MIR155HG
|
MIR155 host gene (non-protein coding) |
chr18_+_57567180 | 1.00 |
ENST00000316660.6
ENST00000269518.9 |
PMAIP1
|
phorbol-12-myristate-13-acetate-induced protein 1 |
chr5_-_16936340 | 0.81 |
ENST00000507288.1
ENST00000513610.1 |
MYO10
|
myosin X |
chr7_-_139763521 | 0.80 |
ENST00000263549.3
|
PARP12
|
poly (ADP-ribose) polymerase family, member 12 |
chr2_-_145278475 | 0.66 |
ENST00000558170.2
|
ZEB2
|
zinc finger E-box binding homeobox 2 |
chr12_+_121647962 | 0.61 |
ENST00000542067.1
|
P2RX4
|
purinergic receptor P2X, ligand-gated ion channel, 4 |
chr12_+_121647868 | 0.58 |
ENST00000359949.7
ENST00000541532.1 ENST00000543171.1 ENST00000538701.1 |
P2RX4
|
purinergic receptor P2X, ligand-gated ion channel, 4 |
chr2_-_208030647 | 0.57 |
ENST00000309446.6
|
KLF7
|
Kruppel-like factor 7 (ubiquitous) |
chr2_-_145277882 | 0.39 |
ENST00000465070.1
ENST00000444559.1 |
ZEB2
|
zinc finger E-box binding homeobox 2 |
chr11_-_105892937 | 0.36 |
ENST00000301919.4
ENST00000534458.1 ENST00000530108.1 ENST00000530788.1 |
MSANTD4
|
Myb/SANT-like DNA-binding domain containing 4 with coiled-coils |
chr12_-_49351148 | 0.30 |
ENST00000398092.4
ENST00000539611.1 |
RP11-302B13.5
ARF3
|
ADP-ribosylation factor 3 ADP-ribosylation factor 3 |
chr1_+_156052354 | 0.29 |
ENST00000368301.2
|
LMNA
|
lamin A/C |
chr2_-_69098566 | 0.28 |
ENST00000295379.1
|
BMP10
|
bone morphogenetic protein 10 |
chr4_+_81187753 | 0.28 |
ENST00000312465.7
ENST00000456523.3 |
FGF5
|
fibroblast growth factor 5 |
chrX_+_119292467 | 0.27 |
ENST00000371388.3
|
RHOXF2
|
Rhox homeobox family, member 2 |
chr3_-_155394152 | 0.25 |
ENST00000494598.1
|
PLCH1
|
phospholipase C, eta 1 |
chr12_-_49351303 | 0.25 |
ENST00000256682.4
|
ARF3
|
ADP-ribosylation factor 3 |
chr12_-_49351228 | 0.23 |
ENST00000541959.1
ENST00000447318.2 |
ARF3
|
ADP-ribosylation factor 3 |
chr1_+_36621529 | 0.23 |
ENST00000316156.4
|
MAP7D1
|
MAP7 domain containing 1 |
chr12_+_49760639 | 0.22 |
ENST00000549538.1
ENST00000548654.1 ENST00000550643.1 ENST00000548710.1 ENST00000549179.1 ENST00000548377.1 |
SPATS2
|
spermatogenesis associated, serine-rich 2 |
chr17_-_17485731 | 0.22 |
ENST00000395783.1
|
PEMT
|
phosphatidylethanolamine N-methyltransferase |
chr5_-_24645078 | 0.21 |
ENST00000264463.4
|
CDH10
|
cadherin 10, type 2 (T2-cadherin) |
chrX_+_15525426 | 0.21 |
ENST00000342014.6
|
BMX
|
BMX non-receptor tyrosine kinase |
chr3_+_10289707 | 0.20 |
ENST00000287652.4
|
TATDN2
|
TatD DNase domain containing 2 |
chr1_-_182642017 | 0.18 |
ENST00000367557.4
ENST00000258302.4 |
RGS8
|
regulator of G-protein signaling 8 |
chr5_-_135528822 | 0.17 |
ENST00000607574.1
|
AC009014.3
|
AC009014.3 |
chr1_+_155006300 | 0.16 |
ENST00000295542.1
ENST00000392480.1 ENST00000423025.2 ENST00000368419.2 |
DCST1
|
DC-STAMP domain containing 1 |
chr11_-_65624415 | 0.16 |
ENST00000524553.1
ENST00000527344.1 |
CFL1
|
cofilin 1 (non-muscle) |
chr1_-_42384343 | 0.16 |
ENST00000372584.1
|
HIVEP3
|
human immunodeficiency virus type I enhancer binding protein 3 |
chr5_+_32711419 | 0.15 |
ENST00000265074.8
|
NPR3
|
natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) |
chr1_+_50571949 | 0.15 |
ENST00000357083.4
|
ELAVL4
|
ELAV like neuron-specific RNA binding protein 4 |
chr6_-_109777128 | 0.15 |
ENST00000358807.3
ENST00000358577.3 |
MICAL1
|
microtubule associated monooxygenase, calponin and LIM domain containing 1 |
chr4_+_4861385 | 0.15 |
ENST00000382723.4
|
MSX1
|
msh homeobox 1 |
chrX_+_41193407 | 0.14 |
ENST00000457138.2
ENST00000441189.2 |
DDX3X
|
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked |
chr2_-_228244013 | 0.14 |
ENST00000304568.3
|
TM4SF20
|
transmembrane 4 L six family member 20 |
chr12_+_3600356 | 0.14 |
ENST00000382622.3
|
PRMT8
|
protein arginine methyltransferase 8 |
chr5_-_108063949 | 0.13 |
ENST00000606054.1
|
LINC01023
|
long intergenic non-protein coding RNA 1023 |
chr15_+_45694523 | 0.13 |
ENST00000305560.6
|
SPATA5L1
|
spermatogenesis associated 5-like 1 |
chr11_-_46615498 | 0.12 |
ENST00000533727.1
ENST00000534300.1 ENST00000528950.1 ENST00000526606.1 |
AMBRA1
|
autophagy/beclin-1 regulator 1 |
chr7_+_39989611 | 0.12 |
ENST00000181839.4
|
CDK13
|
cyclin-dependent kinase 13 |
chr9_+_87283430 | 0.11 |
ENST00000376214.1
ENST00000376213.1 |
NTRK2
|
neurotrophic tyrosine kinase, receptor, type 2 |
chr14_-_21492113 | 0.11 |
ENST00000554094.1
|
NDRG2
|
NDRG family member 2 |
chr8_+_110346546 | 0.10 |
ENST00000521662.1
ENST00000521688.1 ENST00000520147.1 |
ENY2
|
enhancer of yellow 2 homolog (Drosophila) |
chr11_+_62475130 | 0.10 |
ENST00000294117.5
|
GNG3
|
guanine nucleotide binding protein (G protein), gamma 3 |
chr1_-_155006224 | 0.09 |
ENST00000368424.3
|
DCST2
|
DC-STAMP domain containing 2 |
chr17_+_39994032 | 0.09 |
ENST00000293303.4
ENST00000438813.1 |
KLHL10
|
kelch-like family member 10 |
chr1_-_116383322 | 0.09 |
ENST00000429731.1
|
NHLH2
|
nescient helix loop helix 2 |
chr17_-_19651654 | 0.08 |
ENST00000395555.3
|
ALDH3A1
|
aldehyde dehydrogenase 3 family, member A1 |
chr14_-_21492251 | 0.07 |
ENST00000554398.1
|
NDRG2
|
NDRG family member 2 |
chr20_-_3154162 | 0.07 |
ENST00000360342.3
|
LZTS3
|
Homo sapiens leucine zipper, putative tumor suppressor family member 3 (LZTS3), mRNA. |
chr19_+_49838653 | 0.07 |
ENST00000598095.1
ENST00000426897.2 ENST00000323906.4 ENST00000535669.2 ENST00000597602.1 ENST00000595660.1 |
CD37
|
CD37 molecule |
chr11_-_65625014 | 0.07 |
ENST00000534784.1
|
CFL1
|
cofilin 1 (non-muscle) |
chr17_+_36873677 | 0.06 |
ENST00000471200.1
|
MLLT6
|
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 |
chr22_-_29457832 | 0.06 |
ENST00000216071.4
|
C22orf31
|
chromosome 22 open reading frame 31 |
chr2_-_37193606 | 0.06 |
ENST00000379213.2
ENST00000263918.4 |
STRN
|
striatin, calmodulin binding protein |
chr17_-_19651668 | 0.06 |
ENST00000494157.2
ENST00000225740.6 |
ALDH3A1
|
aldehyde dehydrogenase 3 family, member A1 |
chr4_-_103266626 | 0.05 |
ENST00000356736.4
|
SLC39A8
|
solute carrier family 39 (zinc transporter), member 8 |
chr11_+_85566422 | 0.05 |
ENST00000342404.3
|
CCDC83
|
coiled-coil domain containing 83 |
chr7_-_30066233 | 0.04 |
ENST00000222803.5
|
FKBP14
|
FK506 binding protein 14, 22 kDa |
chr11_+_15136462 | 0.04 |
ENST00000379556.3
ENST00000424273.1 |
INSC
|
inscuteable homolog (Drosophila) |
chr6_-_46048116 | 0.04 |
ENST00000185206.6
|
CLIC5
|
chloride intracellular channel 5 |
chr3_+_155838337 | 0.03 |
ENST00000490337.1
ENST00000389636.5 |
KCNAB1
|
potassium voltage-gated channel, shaker-related subfamily, beta member 1 |
chr2_-_192711968 | 0.03 |
ENST00000304141.4
|
SDPR
|
serum deprivation response |
chr15_+_63188009 | 0.02 |
ENST00000557900.1
|
RP11-1069G10.2
|
RP11-1069G10.2 |
chr16_-_55866997 | 0.02 |
ENST00000360526.3
ENST00000361503.4 |
CES1
|
carboxylesterase 1 |
chr5_+_32710736 | 0.01 |
ENST00000415685.2
|
NPR3
|
natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C) |
chr3_-_155394099 | 0.01 |
ENST00000414191.1
|
PLCH1
|
phospholipase C, eta 1 |
chr7_-_124405681 | 0.00 |
ENST00000303921.2
|
GPR37
|
G protein-coupled receptor 37 (endothelin receptor type B-like) |
chr7_-_44580861 | 0.00 |
ENST00000546276.1
ENST00000289547.4 ENST00000381160.3 ENST00000423141.1 |
NPC1L1
|
NPC1-like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 1.0 | GO:1902748 | positive regulation of lens fiber cell differentiation(GO:1902748) |
0.1 | 1.2 | GO:0032306 | regulation of prostaglandin secretion(GO:0032306) positive regulation of prostaglandin secretion(GO:0032308) |
0.1 | 1.0 | GO:0010917 | negative regulation of mitochondrial membrane potential(GO:0010917) |
0.1 | 0.3 | GO:0035105 | sterol regulatory element binding protein import into nucleus(GO:0035105) |
0.0 | 0.1 | GO:0019417 | sulfur oxidation(GO:0019417) |
0.0 | 0.1 | GO:0090427 | activation of meiosis(GO:0090427) |
0.0 | 0.3 | GO:0060298 | positive regulation of sarcomere organization(GO:0060298) |
0.0 | 0.2 | GO:2000784 | regulation of unidimensional cell growth(GO:0051510) negative regulation of unidimensional cell growth(GO:0051511) establishment of cell polarity regulating cell shape(GO:0071964) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769) positive regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000771) regulation of establishment of cell polarity regulating cell shape(GO:2000782) positive regulation of establishment of cell polarity regulating cell shape(GO:2000784) positive regulation of barbed-end actin filament capping(GO:2000814) |
0.0 | 0.1 | GO:0090598 | male genitalia morphogenesis(GO:0048808) male anatomical structure morphogenesis(GO:0090598) |
0.0 | 0.1 | GO:0099540 | synaptic signaling via neuropeptide(GO:0099538) trans-synaptic signaling by neuropeptide(GO:0099540) trans-synaptic signaling by neuropeptide, modulating synaptic transmission(GO:0099551) |
0.0 | 0.2 | GO:0050747 | sphingomyelin biosynthetic process(GO:0006686) positive regulation of lipoprotein metabolic process(GO:0050747) |
0.0 | 0.2 | GO:0001865 | NK T cell differentiation(GO:0001865) |
0.0 | 0.1 | GO:0071651 | positive regulation of chemokine (C-C motif) ligand 5 production(GO:0071651) |
0.0 | 0.1 | GO:0019919 | peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) |
0.0 | 0.2 | GO:0002158 | osteoclast proliferation(GO:0002158) |
0.0 | 0.2 | GO:0090360 | platelet-derived growth factor production(GO:0090360) regulation of platelet-derived growth factor production(GO:0090361) |
0.0 | 0.3 | GO:0023019 | signal transduction involved in regulation of gene expression(GO:0023019) |
0.0 | 0.8 | GO:0051489 | regulation of filopodium assembly(GO:0051489) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.2 | GO:0031229 | integral component of nuclear inner membrane(GO:0005639) intrinsic component of nuclear inner membrane(GO:0031229) |
0.0 | 0.8 | GO:0032433 | filopodium tip(GO:0032433) |
0.0 | 0.1 | GO:0002945 | cyclin K-CDK13 complex(GO:0002945) |
0.0 | 0.3 | GO:0005638 | lamin filament(GO:0005638) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.2 | GO:0035381 | extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381) |
0.1 | 0.8 | GO:0060002 | plus-end directed microfilament motor activity(GO:0060002) |
0.1 | 0.3 | GO:0050429 | calcium-dependent phospholipase C activity(GO:0050429) |
0.1 | 0.2 | GO:0000773 | phosphatidyl-N-methylethanolamine N-methyltransferase activity(GO:0000773) phosphatidylethanolamine N-methyltransferase activity(GO:0004608) phosphatidyl-N-dimethylethanolamine N-methyltransferase activity(GO:0080101) |
0.0 | 0.1 | GO:0035241 | protein-arginine omega-N monomethyltransferase activity(GO:0035241) |
0.0 | 0.2 | GO:0016941 | natriuretic peptide receptor activity(GO:0016941) |
0.0 | 0.1 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.0 | 0.1 | GO:0060175 | brain-derived neurotrophic factor-activated receptor activity(GO:0060175) |
0.0 | 0.3 | GO:0031433 | telethonin binding(GO:0031433) |
0.0 | 0.8 | GO:0003950 | NAD+ ADP-ribosyltransferase activity(GO:0003950) |
0.0 | 1.0 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.0 | 0.2 | GO:0016888 | endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888) |
0.0 | 0.1 | GO:0033592 | RNA strand annealing activity(GO:0033592) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
0.0 | 1.0 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.0 | 0.8 | PID NETRIN PATHWAY | Netrin-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.0 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.0 | 0.8 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |
0.0 | 0.3 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |
0.0 | 0.8 | REACTOME NETRIN1 SIGNALING | Genes involved in Netrin-1 signaling |