Project
Inflammatory response time course, HUVEC (Wada et al., 2009)
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Results for UAAGACG
Z-value: 0.17
Motif logo
miRNA associated with seed UAAGACG
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chrX_+_68048803 Show fit | 0.27 |
ENST00000204961.4
|
ephrin-B1 |
|
| chr21_-_16437255 Show fit | 0.26 |
ENST00000400199.1
ENST00000400202.1 |
nuclear receptor interacting protein 1 |
|
| chr4_+_139936905 Show fit | 0.25 |
ENST00000280614.2
|
CCR4 carbon catabolite repression 4-like (S. cerevisiae) |
|
| chr1_-_205782304 Show fit | 0.23 |
ENST00000367137.3
|
solute carrier family 41 (magnesium transporter), member 1 |
|
| chr2_-_208030647 Show fit | 0.21 |
ENST00000309446.6
|
Kruppel-like factor 7 (ubiquitous) |
|
| chr8_-_141645645 Show fit | 0.20 |
ENST00000519980.1
ENST00000220592.5 |
argonaute RISC catalytic component 2 |
|
| chr6_+_36646435 Show fit | 0.17 |
ENST00000244741.5
ENST00000405375.1 ENST00000373711.2 |
cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
|
| chr7_-_139876812 Show fit | 0.15 |
ENST00000397560.2
|
lysine (K)-specific demethylase 7A |
|
| chr1_+_50574585 Show fit | 0.13 |
ENST00000371824.1
ENST00000371823.4 |
ELAV like neuron-specific RNA binding protein 4 |
|
| chr11_-_2950642 Show fit | 0.12 |
ENST00000314222.4
|
pleckstrin homology-like domain, family A, member 2 |
Network of associatons between targets according to the STRING database.
First level regulatory network of UAAGACG
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0001542 | ovulation from ovarian follicle(GO:0001542) |
| 0.0 | 0.2 | GO:0010961 | cellular magnesium ion homeostasis(GO:0010961) |
| 0.0 | 0.2 | GO:0060574 | intestinal epithelial cell maturation(GO:0060574) |
| 0.0 | 0.2 | GO:0035087 | siRNA loading onto RISC involved in RNA interference(GO:0035087) |
| 0.0 | 0.1 | GO:0060720 | spongiotrophoblast cell proliferation(GO:0060720) regulation of spongiotrophoblast cell proliferation(GO:0060721) cell proliferation involved in embryonic placenta development(GO:0060722) regulation of cell proliferation involved in embryonic placenta development(GO:0060723) |
| 0.0 | 0.1 | GO:1905075 | proepicardium development(GO:0003342) septum transversum development(GO:0003343) occluding junction disassembly(GO:1905071) regulation of occluding junction disassembly(GO:1905073) positive regulation of occluding junction disassembly(GO:1905075) |
| 0.0 | 0.0 | GO:0003285 | septum secundum development(GO:0003285) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0070557 | PCNA-p21 complex(GO:0070557) |
| 0.0 | 0.2 | GO:0035068 | micro-ribonucleoprotein complex(GO:0035068) |
| 0.0 | 0.1 | GO:0044308 | axonal spine(GO:0044308) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0035259 | glucocorticoid receptor binding(GO:0035259) |
| 0.1 | 0.2 | GO:0098808 | mRNA cap binding(GO:0098808) |
| 0.1 | 0.2 | GO:0019912 | cyclin-dependent protein kinase activating kinase activity(GO:0019912) |
| 0.0 | 0.2 | GO:0015095 | magnesium ion transmembrane transporter activity(GO:0015095) |
| 0.0 | 0.1 | GO:0050510 | N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity(GO:0050510) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |