Project

Inflammatory response time course, HUVEC (Wada et al., 2009)

Navigation
Downloads

Results for UGACAUC

Z-value: 0.22

Motif logo

logo of

miRNA associated with seed UGACAUC

NamemiRBASE accession
hsa-miR-489-3p
MIMAT0002805

Activity profile of UGACAUC motif

Sorted Z-values of UGACAUC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr6_+_116601265 0.25 ENST00000452085.3
DSE
dermatan sulfate epimerase
chr1_-_205782304 0.20 ENST00000367137.3
SLC41A1
solute carrier family 41 (magnesium transporter), member 1
chr18_+_21693306 0.15 ENST00000540918.2
TTC39C
tetratricopeptide repeat domain 39C
chr21_-_16437255 0.14 ENST00000400199.1
ENST00000400202.1
NRIP1
nuclear receptor interacting protein 1
chr5_-_172756506 0.12 ENST00000265087.4
STC2
stanniocalcin 2
chr5_+_135364584 0.12 ENST00000442011.2
ENST00000305126.8
TGFBI
transforming growth factor, beta-induced, 68kDa
chr6_-_100912785 0.11 ENST00000369208.3
SIM1
single-minded family bHLH transcription factor 1
chr16_+_50187556 0.11 ENST00000561678.1
ENST00000357464.3
PAPD5
PAP associated domain containing 5
chr6_+_123317116 0.10 ENST00000275162.5
CLVS2
clavesin 2
chr1_+_206808918 0.08 ENST00000367108.3
DYRK3
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
chr3_+_29322803 0.07 ENST00000396583.3
ENST00000383767.2
RBMS3
RNA binding motif, single stranded interacting protein 3
chr7_-_98741642 0.07 ENST00000361368.2
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
chr7_-_41742697 0.07 ENST00000242208.4
INHBA
inhibin, beta A
chr7_+_43152191 0.07 ENST00000395891.2
HECW1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
chr10_+_98592009 0.07 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr11_+_118307179 0.07 ENST00000534358.1
ENST00000531904.2
ENST00000389506.5
ENST00000354520.4
KMT2A
lysine (K)-specific methyltransferase 2A
chr14_-_45431091 0.06 ENST00000579157.1
ENST00000396128.4
ENST00000556500.1
KLHL28
kelch-like family member 28
chr10_+_72575643 0.06 ENST00000373202.3
SGPL1
sphingosine-1-phosphate lyase 1
chr2_-_100939195 0.06 ENST00000393437.3
LONRF2
LON peptidase N-terminal domain and ring finger 2
chr21_-_15755446 0.05 ENST00000544452.1
ENST00000285667.3
HSPA13
heat shock protein 70kDa family, member 13
chr8_+_56014949 0.05 ENST00000327381.6
XKR4
XK, Kell blood group complex subunit-related family, member 4
chr14_+_70078303 0.05 ENST00000342745.4
KIAA0247
KIAA0247
chrX_+_64887512 0.05 ENST00000360270.5
MSN
moesin
chr5_-_115910630 0.05 ENST00000343348.6
SEMA6A
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr17_+_27717415 0.05 ENST00000583121.1
ENST00000261716.3
TAOK1
TAO kinase 1
chr4_-_139163491 0.05 ENST00000280612.5
SLC7A11
solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
chr15_+_44719394 0.05 ENST00000260327.4
ENST00000396780.1
CTDSPL2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr3_-_178790057 0.05 ENST00000311417.2
ZMAT3
zinc finger, matrin-type 3
chr7_+_107110488 0.05 ENST00000304402.4
GPR22
G protein-coupled receptor 22
chr3_-_113465065 0.05 ENST00000497255.1
ENST00000478020.1
ENST00000240922.3
ENST00000493900.1
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr10_+_70480963 0.05 ENST00000265872.6
ENST00000535016.1
ENST00000538031.1
ENST00000543719.1
ENST00000539539.1
ENST00000543225.1
ENST00000536012.1
ENST00000494903.2
CCAR1
cell division cycle and apoptosis regulator 1
chrX_-_73834449 0.05 ENST00000332687.6
ENST00000349225.2
RLIM
ring finger protein, LIM domain interacting
chr4_-_153457197 0.04 ENST00000281708.4
FBXW7
F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
chr10_-_94003003 0.04 ENST00000412050.4
CPEB3
cytoplasmic polyadenylation element binding protein 3
chr18_-_65184217 0.04 ENST00000310045.7
DSEL
dermatan sulfate epimerase-like
chr17_-_27621125 0.04 ENST00000579665.1
ENST00000225388.4
NUFIP2
nuclear fragile X mental retardation protein interacting protein 2
chr20_-_10654639 0.04 ENST00000254958.5
JAG1
jagged 1
chr11_-_132813566 0.04 ENST00000331898.7
OPCML
opioid binding protein/cell adhesion molecule-like
chr19_-_46476791 0.04 ENST00000263257.5
NOVA2
neuro-oncological ventral antigen 2
chr2_-_161350305 0.04 ENST00000348849.3
RBMS1
RNA binding motif, single stranded interacting protein 1
chr8_+_132916318 0.04 ENST00000254624.5
ENST00000522709.1
EFR3A
EFR3 homolog A (S. cerevisiae)
chr14_+_79745746 0.04 ENST00000281127.7
NRXN3
neurexin 3
chrX_+_122993827 0.04 ENST00000371199.3
XIAP
X-linked inhibitor of apoptosis
chr18_+_49866496 0.04 ENST00000442544.2
DCC
deleted in colorectal carcinoma
chr1_-_244013384 0.04 ENST00000366539.1
AKT3
v-akt murine thymoma viral oncogene homolog 3
chr6_+_97372596 0.03 ENST00000369261.4
KLHL32
kelch-like family member 32
chr1_+_50574585 0.03 ENST00000371824.1
ENST00000371823.4
ELAVL4
ELAV like neuron-specific RNA binding protein 4
chr2_-_27938593 0.03 ENST00000379677.2
AC074091.13
Uncharacterized protein
chrX_+_110339439 0.03 ENST00000372010.1
ENST00000519681.1
ENST00000372007.5
PAK3
p21 protein (Cdc42/Rac)-activated kinase 3
chr2_-_65357225 0.03 ENST00000398529.3
ENST00000409751.1
ENST00000356214.7
ENST00000409892.1
ENST00000409784.3
RAB1A
RAB1A, member RAS oncogene family
chr10_-_27443155 0.03 ENST00000427324.1
ENST00000326799.3
YME1L1
YME1-like 1 ATPase
chr2_+_198318147 0.03 ENST00000263960.2
COQ10B
coenzyme Q10 homolog B (S. cerevisiae)
chr4_-_103748880 0.03 ENST00000453744.2
ENST00000349311.8
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr13_+_96743093 0.03 ENST00000376705.2
HS6ST3
heparan sulfate 6-O-sulfotransferase 3
chr6_-_39197226 0.03 ENST00000359534.3
KCNK5
potassium channel, subfamily K, member 5
chr7_+_31092076 0.03 ENST00000304166.4
ADCYAP1R1
adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
chr11_-_106889250 0.03 ENST00000526355.2
GUCY1A2
guanylate cyclase 1, soluble, alpha 2
chr15_-_49255632 0.03 ENST00000332408.4
SHC4
SHC (Src homology 2 domain containing) family, member 4
chr2_+_201170703 0.03 ENST00000358677.5
SPATS2L
spermatogenesis associated, serine-rich 2-like
chr15_+_59279851 0.03 ENST00000348370.4
ENST00000434298.1
ENST00000559160.1
RNF111
ring finger protein 111
chr4_+_166300084 0.03 ENST00000402744.4
CPE
carboxypeptidase E
chr2_-_158485387 0.03 ENST00000243349.8
ACVR1C
activin A receptor, type IC
chr13_-_73301819 0.03 ENST00000377818.3
MZT1
mitotic spindle organizing protein 1
chr1_+_47137445 0.03 ENST00000569393.1
ENST00000334122.4
ENST00000415500.1
TEX38
testis expressed 38
chr12_+_54943134 0.03 ENST00000243052.3
PDE1B
phosphodiesterase 1B, calmodulin-dependent
chr9_-_94186131 0.03 ENST00000297689.3
NFIL3
nuclear factor, interleukin 3 regulated
chr15_+_62853562 0.02 ENST00000561311.1
TLN2
talin 2
chr3_+_85008089 0.02 ENST00000383699.3
CADM2
cell adhesion molecule 2
chr3_-_182698381 0.02 ENST00000292782.4
DCUN1D1
DCN1, defective in cullin neddylation 1, domain containing 1
chr6_+_163148161 0.02 ENST00000337019.3
ENST00000366889.2
PACRG
PARK2 co-regulated
chr1_+_28995231 0.02 ENST00000373816.1
GMEB1
glucocorticoid modulatory element binding protein 1
chr6_-_88411911 0.02 ENST00000257787.5
AKIRIN2
akirin 2
chr2_+_166326157 0.02 ENST00000421875.1
ENST00000314499.7
ENST00000409664.1
CSRNP3
cysteine-serine-rich nuclear protein 3
chr1_-_114355083 0.02 ENST00000261441.5
RSBN1
round spermatid basic protein 1
chrX_-_118986911 0.02 ENST00000276201.2
ENST00000345865.2
UPF3B
UPF3 regulator of nonsense transcripts homolog B (yeast)
chr1_+_193091080 0.02 ENST00000367435.3
CDC73
cell division cycle 73
chr18_+_63418068 0.02 ENST00000397968.2
CDH7
cadherin 7, type 2
chr18_+_59854480 0.02 ENST00000256858.6
ENST00000398130.2
KIAA1468
KIAA1468
chr9_+_116638562 0.02 ENST00000374126.5
ENST00000288466.7
ZNF618
zinc finger protein 618
chr11_-_31839488 0.02 ENST00000419022.1
ENST00000379132.3
ENST00000379129.2
PAX6
paired box 6
chr9_+_77112244 0.02 ENST00000376896.3
RORB
RAR-related orphan receptor B
chr17_-_36981556 0.02 ENST00000536127.1
ENST00000225428.5
CWC25
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
chr5_-_140998616 0.02 ENST00000389054.3
ENST00000398562.2
ENST00000389057.5
ENST00000398566.3
ENST00000398557.4
ENST00000253811.6
DIAPH1
diaphanous-related formin 1
chr16_-_2264779 0.02 ENST00000333503.7
PGP
phosphoglycolate phosphatase
chr2_-_178937478 0.02 ENST00000286063.6
PDE11A
phosphodiesterase 11A
chr4_-_53525406 0.02 ENST00000451218.2
ENST00000441222.3
USP46
ubiquitin specific peptidase 46
chr11_+_9406169 0.02 ENST00000379719.3
ENST00000527431.1
IPO7
importin 7
chr13_+_98605902 0.02 ENST00000460070.1
ENST00000481455.1
ENST00000261574.5
ENST00000493281.1
ENST00000463157.1
ENST00000471898.1
ENST00000489058.1
ENST00000481689.1
IPO5
importin 5
chr12_+_95611516 0.02 ENST00000436874.1
VEZT
vezatin, adherens junctions transmembrane protein
chr19_-_55954230 0.02 ENST00000376325.4
SHISA7
shisa family member 7
chr18_+_22006580 0.02 ENST00000284202.4
IMPACT
impact RWD domain protein
chr5_-_147162078 0.02 ENST00000507386.1
JAKMIP2
janus kinase and microtubule interacting protein 2
chr10_+_11206925 0.02 ENST00000354440.2
ENST00000315874.4
ENST00000427450.1
CELF2
CUGBP, Elav-like family member 2
chr20_+_47538357 0.02 ENST00000371917.4
ARFGEF2
ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
chr5_+_109025067 0.02 ENST00000261483.4
MAN2A1
mannosidase, alpha, class 2A, member 1
chr16_+_24266874 0.01 ENST00000005284.3
CACNG3
calcium channel, voltage-dependent, gamma subunit 3
chr17_+_59529743 0.01 ENST00000589003.1
ENST00000393853.4
TBX4
T-box 4
chr1_+_46668994 0.01 ENST00000371980.3
LURAP1
leucine rich adaptor protein 1
chr18_+_32558208 0.01 ENST00000436190.2
MAPRE2
microtubule-associated protein, RP/EB family, member 2
chr3_+_45636219 0.01 ENST00000273317.4
LIMD1
LIM domains containing 1
chr15_+_51633826 0.01 ENST00000335449.6
GLDN
gliomedin
chr2_+_172950227 0.01 ENST00000341900.6
DLX1
distal-less homeobox 1
chr4_+_160188889 0.01 ENST00000264431.4
RAPGEF2
Rap guanine nucleotide exchange factor (GEF) 2
chr4_-_111544254 0.01 ENST00000306732.3
PITX2
paired-like homeodomain 2
chr5_-_131132614 0.01 ENST00000307968.7
ENST00000307954.8
FNIP1
folliculin interacting protein 1
chr8_-_122653630 0.01 ENST00000303924.4
HAS2
hyaluronan synthase 2
chr19_-_18314836 0.01 ENST00000464076.3
ENST00000222256.4
RAB3A
RAB3A, member RAS oncogene family
chr9_-_135819987 0.01 ENST00000298552.3
ENST00000403810.1
TSC1
tuberous sclerosis 1
chr18_+_44526786 0.01 ENST00000245121.5
ENST00000356157.7
KATNAL2
katanin p60 subunit A-like 2
chr20_+_49348081 0.01 ENST00000371610.2
PARD6B
par-6 family cell polarity regulator beta
chrX_-_124097620 0.01 ENST00000371130.3
ENST00000422452.2
TENM1
teneurin transmembrane protein 1
chr8_-_72987810 0.01 ENST00000262209.4
TRPA1
transient receptor potential cation channel, subfamily A, member 1
chr6_-_114292449 0.01 ENST00000519065.1
HDAC2
histone deacetylase 2
chr8_-_72268889 0.01 ENST00000388742.4
EYA1
eyes absent homolog 1 (Drosophila)
chr2_+_28974668 0.01 ENST00000296122.6
ENST00000395366.2
PPP1CB
protein phosphatase 1, catalytic subunit, beta isozyme
chr2_+_14775215 0.01 ENST00000581929.1
AC011897.1
Uncharacterized protein
chr16_-_62070305 0.01 ENST00000584337.1
CDH8
cadherin 8, type 2
chr15_+_68570062 0.01 ENST00000306917.4
FEM1B
fem-1 homolog b (C. elegans)
chr5_-_98262240 0.01 ENST00000284049.3
CHD1
chromodomain helicase DNA binding protein 1
chr5_+_60933634 0.01 ENST00000505642.1
C5orf64
chromosome 5 open reading frame 64
chr2_+_32582086 0.01 ENST00000421745.2
BIRC6
baculoviral IAP repeat containing 6
chrX_+_37865804 0.01 ENST00000297875.2
ENST00000357972.5
SYTL5
synaptotagmin-like 5
chr4_+_75858290 0.01 ENST00000513238.1
PARM1
prostate androgen-regulated mucin-like protein 1
chr14_-_25519095 0.01 ENST00000419632.2
ENST00000358326.2
ENST00000396700.1
ENST00000548724.1
STXBP6
syntaxin binding protein 6 (amisyn)
chr6_-_139695757 0.01 ENST00000367651.2
CITED2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr10_+_98741041 0.01 ENST00000286067.2
C10orf12
chromosome 10 open reading frame 12
chr7_-_19157248 0.01 ENST00000242261.5
TWIST1
twist family bHLH transcription factor 1
chr11_-_27528301 0.01 ENST00000524596.1
ENST00000278193.2
LIN7C
lin-7 homolog C (C. elegans)
chr20_-_9819479 0.01 ENST00000378423.1
ENST00000353224.5
PAK7
p21 protein (Cdc42/Rac)-activated kinase 7
chr19_+_11071546 0.01 ENST00000358026.2
SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr3_+_132136331 0.01 ENST00000260818.6
DNAJC13
DnaJ (Hsp40) homolog, subfamily C, member 13
chr6_+_117586713 0.01 ENST00000352536.3
ENST00000326274.5
VGLL2
vestigial like 2 (Drosophila)
chr4_-_120988229 0.01 ENST00000296509.6
MAD2L1
MAD2 mitotic arrest deficient-like 1 (yeast)
chr6_-_24911195 0.01 ENST00000259698.4
FAM65B
family with sequence similarity 65, member B
chr10_+_112679301 0.01 ENST00000265277.5
ENST00000369452.4
SHOC2
soc-2 suppressor of clear homolog (C. elegans)
chr2_+_176972000 0.01 ENST00000249504.5
HOXD11
homeobox D11
chr9_-_6015607 0.01 ENST00000259569.5
RANBP6
RAN binding protein 6
chr12_-_102513843 0.00 ENST00000551744.2
ENST00000552283.1
NUP37
nucleoporin 37kDa
chr2_+_166095898 0.00 ENST00000424833.1
ENST00000375437.2
ENST00000357398.3
SCN2A
sodium channel, voltage-gated, type II, alpha subunit
chr12_-_29534074 0.00 ENST00000546839.1
ENST00000360150.4
ENST00000552155.1
ENST00000550353.1
ENST00000548441.1
ENST00000552132.1
ERGIC2
ERGIC and golgi 2
chr16_-_21663950 0.00 ENST00000268389.4
IGSF6
immunoglobulin superfamily, member 6
chr16_+_9185450 0.00 ENST00000327827.7
C16orf72
chromosome 16 open reading frame 72
chr5_-_168728103 0.00 ENST00000519560.1
SLIT3
slit homolog 3 (Drosophila)
chr11_+_105480793 0.00 ENST00000282499.5
ENST00000393127.2
ENST00000527669.1
GRIA4
glutamate receptor, ionotropic, AMPA 4
chr4_-_42154895 0.00 ENST00000502486.1
ENST00000504360.1
BEND4
BEN domain containing 4
chr1_-_108507631 0.00 ENST00000527011.1
ENST00000370056.4
VAV3
vav 3 guanine nucleotide exchange factor
chr12_-_54673871 0.00 ENST00000209875.4
CBX5
chromobox homolog 5
chr6_-_13711773 0.00 ENST00000011619.3
RANBP9
RAN binding protein 9
chr15_-_49447835 0.00 ENST00000388901.5
ENST00000299259.6
COPS2
COP9 signalosome subunit 2
chr4_+_71768043 0.00 ENST00000502869.1
ENST00000309395.2
ENST00000396051.2
MOB1B
MOB kinase activator 1B
chr1_+_171810606 0.00 ENST00000358155.4
ENST00000367733.2
ENST00000355305.5
ENST00000367731.1
DNM3
dynamin 3
chr3_+_145782358 0.00 ENST00000422482.1
AC107021.1
HCG1786590; PRO2533; Uncharacterized protein

Network of associatons between targets according to the STRING database.

First level regulatory network of UGACAUC

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0010961 cellular magnesium ion homeostasis(GO:0010961)
0.0 0.1 GO:1902534 single-organism membrane invagination(GO:1902534)
0.0 0.1 GO:0060278 regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279)
0.0 0.1 GO:0035617 stress granule disassembly(GO:0035617)
0.0 0.0 GO:1900365 positive regulation of mRNA polyadenylation(GO:1900365)
0.0 0.0 GO:0061073 ciliary body morphogenesis(GO:0061073)
0.0 0.1 GO:2001256 regulation of store-operated calcium entry(GO:2001256)
0.0 0.1 GO:0043634 polyadenylation-dependent ncRNA catabolic process(GO:0043634)
0.0 0.0 GO:1902528 regulation of protein linear polyubiquitination(GO:1902528) positive regulation of protein linear polyubiquitination(GO:1902530)
0.0 0.0 GO:0021965 spinal cord ventral commissure morphogenesis(GO:0021965)
0.0 0.1 GO:1901674 histone H3-K27 acetylation(GO:0043974) regulation of histone H3-K27 acetylation(GO:1901674) regulation of cellular response to drug(GO:2001038)
0.0 0.3 GO:0030208 dermatan sulfate biosynthetic process(GO:0030208)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0043512 inhibin complex(GO:0043511) inhibin A complex(GO:0043512)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0047757 chondroitin-glucuronate 5-epimerase activity(GO:0047757)
0.0 0.1 GO:0070699 type II activin receptor binding(GO:0070699)
0.0 0.1 GO:0045322 unmethylated CpG binding(GO:0045322)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)