hg19_v2_chr3_+_39851094_39851151	1.8002	ACAGUAC	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr8_-_125384927_125384952	1.50386	ACAGUAC	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr18_+_8717369_8717384	1.46016	ACAGUAC	ENST00000359865.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000400050.3|SOGA2|ENSG00000168502.13|SOGA family member 2 	ENST00000306285.7|SOGA2|ENSG00000168502.13|SOGA family member 2
hg19_v2_chr9_-_134145880_134145952	1.26921	ACAGUAC	ENST00000372269.3|FAM78A|ENSG00000126882.8|family with sequence similarity 78, member A 	ENST00000464831.1|FAM78A|ENSG00000126882.8|family with sequence similarity 78, member A
hg19_v2_chr9_-_14314066_14314075	1.22363	ACAGUAC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr6_-_16761678_16761721	1.20074	ACAGUAC	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr8_-_127570603_127570648	1.12083	ACAGUAC	ENST00000304916.3|FAM84B|ENSG00000168672.3|family with sequence similarity 84, member B
hg19_v2_chr2_+_45878790_45878913	1.10092	ACAGUAC	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr2_-_43453734_43453751	1.08712	ACAGUAC	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr15_-_52970820_52970960	1.01803	ACAGUAC	ENST00000261844.7|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000399202.4|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000562135.1|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr17_+_47865917_47866068	1.00597	ACAGUAC	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr5_-_172198190_172198206	0.951641	ACAGUAC	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr4_+_126237554_126237554	0.924111	ACAGUAC	ENST00000394329.3|FAT4|ENSG00000196159.7|FAT atypical cadherin 4
hg19_v2_chr20_+_34700333_34700348	0.901019	ACAGUAC	ENST00000441639.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr13_-_77460525_77460548	0.831734	ACAGUAC	ENST00000377474.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12 	ENST00000317765.2|KCTD12|ENSG00000178695.4|potassium channel tetramerization domain containing 12
hg19_v2_chr12_+_93965451_93965494	0.824613	ACAGUAC	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr9_-_14693417_14693469	0.781524	ACAGUAC	ENST00000380916.4|ZDHHC21|ENSG00000175893.7|zinc finger, DHHC-type containing 21
hg19_v2_chr19_-_31840438_31840470	0.767065	ACAGUAC	ENST00000240587.4|TSHZ3|ENSG00000121297.6|teashirt zinc finger homeobox 3
hg19_v2_chr12_-_76425368_76425384	0.731216	ACAGUAC	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr7_+_8008418_8008443	0.702646	ACAGUAC	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr3_-_15901278_15901354	0.687787	ACAGUAC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr5_-_107006596_107006651	0.663976	ACAGUAC	ENST00000333274.6|EFNA5|ENSG00000184349.8|ephrin-A5
hg19_v2_chr1_+_198126093_198126207	0.661919	ACAGUAC	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr9_+_4490394_4490446	0.651849	ACAGUAC	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr17_+_30813576_30813637	0.647497	ACAGUAC	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chr7_-_120498357_120498456	0.629555	ACAGUAC	ENST00000415871.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000222747.3|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000430985.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr6_+_143929307_143929322	0.627736	ACAGUAC	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr10_+_8096631_8096660	0.615463	ACAGUAC	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr3_+_107241783_107241850	0.613756	ACAGUAC	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr12_-_42877764_42877803	0.613747	ACAGUAC	ENST00000455697.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr1_+_178694300_178694346	0.608506	ACAGUAC	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr6_+_148663729_148663847	0.602534	ACAGUAC	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr4_+_26862400_26862416	0.601839	ACAGUAC	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr3_-_124774802_124774852	0.591525	ACAGUAC	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr2_+_61108650_61108687	0.588282	ACAGUAC	ENST00000295025.8|REL|ENSG00000162924.9|v-rel avian reticuloendotheliosis viral oncogene homolog
hg19_v2_chr14_+_85996471_85996497	0.572555	ACAGUAC	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr21_-_27542972_27543138	0.566343	ACAGUAC	ENST00000346798.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000439274.2|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000354192.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000348990.5|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000357903.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000358918.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein 	ENST00000359726.3|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr4_-_141075330_141075381	0.556672	ACAGUAC	ENST00000509479.2|MAML3|ENSG00000196782.8|mastermind-like 3 (Drosophila)
hg19_v2_chr7_+_116312411_116312502	0.541181	ACAGUAC	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr10_+_76586348_76586400	0.529874	ACAGUAC	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr19_+_10527449_10527619	0.512763	ACAGUAC	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr11_+_86748863_86748948	0.501949	ACAGUAC	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr13_-_41240717_41240735	0.499259	ACAGUAC	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr20_-_31071239_31071307	0.4833	ACAGUAC	ENST00000359676.5|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr22_+_40573921_40573946	0.475546	ACAGUAC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr4_+_134070439_134070470	0.472674	ACAGUAC	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr9_-_129885010_129885162	0.466152	ACAGUAC	ENST00000373425.3|ANGPTL2|ENSG00000136859.5|angiopoietin-like 2
hg19_v2_chr5_+_176560742_176560926	0.464955	ACAGUAC	ENST00000439151.2|NSD1|ENSG00000165671.14|nuclear receptor binding SET domain protein 1
hg19_v2_chr4_-_99579733_99579789	0.464053	ACAGUAC	ENST00000305798.3|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr20_+_11871371_11871428	0.463719	ACAGUAC	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr8_-_42397037_42397121	0.45612	ACAGUAC	ENST00000342228.3|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr4_-_138453606_138453673	0.455471	ACAGUAC	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr6_+_161412759_161412846	0.455171	ACAGUAC	ENST00000366919.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000392142.4|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000366920.2|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4 	ENST00000348824.7|MAP3K4|ENSG00000085511.15|mitogen-activated protein kinase kinase kinase 4
hg19_v2_chr12_+_50898881_50898907	0.451706	ACAGUAC	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr7_+_1570322_1570360	0.447478	ACAGUAC	ENST00000343242.4|MAFK|ENSG00000198517.5|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K
hg19_v2_chr12_+_13349650_13349667	0.440661	ACAGUAC	ENST00000256951.5|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000431267.2|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000542474.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1 	ENST00000544053.1|EMP1|ENSG00000134531.5|epithelial membrane protein 1
hg19_v2_chr18_+_60190226_60190314	0.419779	ACAGUAC	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr3_+_23986748_23986761	0.41663	ACAGUAC	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr20_+_37434329_37434371	0.412355	ACAGUAC	ENST00000299824.1|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B 	ENST00000373331.2|PPP1R16B|ENSG00000101445.5|protein phosphatase 1, regulatory subunit 16B
hg19_v2_chr11_+_92085262_92085262	0.394924	ACAGUAC	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chr21_+_35445827_35445886	0.391004	ACAGUAC	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr3_+_152017181_152017229	0.388573	ACAGUAC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr1_+_214161272_214161322	0.386561	ACAGUAC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chrX_+_118108571_118108589	0.3837	ACAGUAC	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr12_-_31744031_31744059	0.379745	ACAGUAC	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr6_-_111804393_111804436	0.37832	ACAGUAC	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr5_-_90679145_90679176	0.361113	ACAGUAC	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr17_-_47755436_47755596	0.360445	ACAGUAC	ENST00000505581.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000514121.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393328.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000509079.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393331.3|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000347630.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000504102.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr5_+_77656339_77656362	0.360206	ACAGUAC	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chrX_-_119694538_119694555	0.356449	ACAGUAC	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr15_+_77223960_77223994	0.352591	ACAGUAC	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr5_+_60628074_60628100	0.345698	ACAGUAC	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr17_+_30469473_30469556	0.34414	ACAGUAC	ENST00000333942.6|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000358365.3|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000583994.1|RHOT1|ENSG00000126858.12|ras homolog family member T1 	ENST00000545287.2|RHOT1|ENSG00000126858.12|ras homolog family member T1
hg19_v2_chr6_-_8064567_8064652	0.339993	ACAGUAC	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr4_+_55524085_55524110	0.338234	ACAGUAC	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr2_+_170683942_170683972	0.334561	ACAGUAC	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr1_-_186649543_186649563	0.325618	ACAGUAC	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr10_-_75634260_75634321	0.325529	ACAGUAC	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr4_+_170541660_170541677	0.32287	ACAGUAC	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr16_-_17564738_17564834	0.316859	ACAGUAC	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr1_-_184723942_184724047	0.316484	ACAGUAC	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr9_-_6015607_6015634	0.314274	ACAGUAC	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr11_-_94964354_94964374	0.312534	ACAGUAC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr1_+_180601139_180601180	0.311767	ACAGUAC	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr17_+_61086917_61086921	0.311658	ACAGUAC	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr2_+_169312350_169312372	0.30914	ACAGUAC	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr11_-_73309228_73309257	0.309017	ACAGUAC	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr6_+_107811162_107811196	0.308225	ACAGUAC	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr8_-_92053212_92053292	0.303975	ACAGUAC	ENST00000285419.3|TMEM55A|ENSG00000155099.3|transmembrane protein 55A
hg19_v2_chr16_-_19533404_19533467	0.298831	ACAGUAC	ENST00000353258.3|GDE1|ENSG00000006007.7|glycerophosphodiester phosphodiesterase 1
hg19_v2_chr13_+_33160553_33160564	0.297507	ACAGUAC	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr1_-_205649580_205649596	0.292774	ACAGUAC	ENST00000367145.3|SLC45A3|ENSG00000158715.5|solute carrier family 45, member 3
hg19_v2_chr7_-_105029329_105029376	0.291032	ACAGUAC	ENST00000393651.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2 	ENST00000460391.1|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr2_+_56411131_56411258	0.285013	ACAGUAC	ENST00000407595.2|CCDC85A|ENSG00000055813.5|coiled-coil domain containing 85A
hg19_v2_chr11_-_86666427_86666450	0.284367	ACAGUAC	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr9_+_5629025_5629119	0.282164	ACAGUAC	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr12_+_50451331_50451429	0.281949	ACAGUAC	ENST00000228468.4|ASIC1|ENSG00000110881.7|acid-sensing (proton-gated) ion channel 1
hg19_v2_chr14_-_57735528_57735726	0.281741	ACAGUAC	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr5_-_127873659_127873735	0.278986	ACAGUAC	ENST00000262464.4|FBN2|ENSG00000138829.6|fibrillin 2
hg19_v2_chr6_+_121756809_121756838	0.275349	ACAGUAC	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr3_-_178790057_178790072	0.275076	ACAGUAC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr3_+_88188254_88188254	0.274957	ACAGUAC	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr16_+_58059470_58059470	0.274824	ACAGUAC	ENST00000219271.3|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr17_-_65241281_65241326	0.271133	ACAGUAC	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chrX_+_105066524_105066552	0.266595	ACAGUAC	ENST00000243300.9|NRK|ENSG00000123572.12|Nik related kinase 	ENST00000428173.2|NRK|ENSG00000123572.12|Nik related kinase
hg19_v2_chrX_-_77041685_77041716	0.264882	ACAGUAC	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr5_-_137090028_137090075	0.263565	ACAGUAC	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr9_-_36400213_36400296	0.263291	ACAGUAC	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr1_+_82266053_82266082	0.260983	ACAGUAC	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr1_+_244214577_244214593	0.259545	ACAGUAC	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr1_-_234745234_234745283	0.256967	ACAGUAC	ENST00000366610.3|IRF2BP2|ENSG00000168264.6|interferon regulatory factor 2 binding protein 2 	ENST00000366609.3|IRF2BP2|ENSG00000168264.6|interferon regulatory factor 2 binding protein 2
hg19_v2_chr2_-_164592497_164592573	0.256414	ACAGUAC	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr11_+_9685604_9685706	0.256327	ACAGUAC	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr8_+_37594130_37594169	0.255312	ACAGUAC	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr15_+_38544476_38544574	0.253178	ACAGUAC	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chrX_-_33146477_33146521	0.25265	ACAGUAC	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr6_-_85474219_85474237	0.250937	ACAGUAC	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr4_+_144434584_144434709	0.249708	ACAGUAC	ENST00000283131.3|SMARCA5|ENSG00000153147.5|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
hg19_v2_chr2_+_46926048_46926095	0.249515	ACAGUAC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr2_+_177015950_177015950	0.24659	ACAGUAC	ENST00000306324.3|HOXD4|ENSG00000170166.5|homeobox D4
hg19_v2_chr12_+_14518598_14518663	0.243059	ACAGUAC	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr4_-_39640700_39640712	0.242512	ACAGUAC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr9_+_128509624_128509658	0.240862	ACAGUAC	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr1_-_169455169_169455241	0.240484	ACAGUAC	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr11_+_4116005_4116047	0.239336	ACAGUAC	ENST00000300738.5|RRM1|ENSG00000167325.10|ribonucleotide reductase M1
hg19_v2_chr8_-_71316021_71316068	0.237843	ACAGUAC	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr4_-_125633876_125633897	0.232664	ACAGUAC	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr7_+_65338230_65338293	0.23161	ACAGUAC	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr16_+_67596310_67596353	0.230856	ACAGUAC	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr5_-_132299313_132299334	0.229508	ACAGUAC	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr4_-_7873981_7874044	0.223694	ACAGUAC	ENST00000360265.4|AFAP1|ENSG00000196526.6|actin filament associated protein 1
hg19_v2_chr16_-_10674528_10674555	0.222407	ACAGUAC	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr6_-_53409890_53409927	0.221348	ACAGUAC	ENST00000229416.6|GCLC|ENSG00000001084.6|glutamate-cysteine ligase, catalytic subunit
hg19_v2_chr7_+_115850547_115850626	0.220765	ACAGUAC	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr16_-_70719925_70719989	0.220658	ACAGUAC	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr15_+_96873921_96873946	0.216765	ACAGUAC	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr12_+_111843749_111843763	0.216662	ACAGUAC	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr6_-_99873145_99873207	0.21313	ACAGUAC	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr5_+_139505520_139505523	0.21151	ACAGUAC	ENST00000333305.3|IGIP|ENSG00000182700.3|IgA-inducing protein
hg19_v2_chr9_-_3525968_3526016	0.210619	ACAGUAC	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr1_+_220701456_220701574	0.209952	ACAGUAC	ENST00000366918.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1 	ENST00000402574.1|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr3_+_15247686_15247784	0.205939	ACAGUAC	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chrX_-_114468605_114468640	0.204361	ACAGUAC	ENST00000538422.1|LRCH2|ENSG00000130224.10|leucine-rich repeats and calponin homology (CH) domain containing 2 	ENST00000317135.8|LRCH2|ENSG00000130224.10|leucine-rich repeats and calponin homology (CH) domain containing 2
hg19_v2_chr15_+_39873268_39873294	0.20143	ACAGUAC	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr3_-_129407535_129407575	0.197627	ACAGUAC	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr9_-_98279241_98279339	0.194634	ACAGUAC	ENST00000437951.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000375274.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000430669.2|PTCH1|ENSG00000185920.11|patched 1 	ENST00000468211.2|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr5_+_61602055_61602083	0.192326	ACAGUAC	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chrX_-_109561294_109561467	0.191717	ACAGUAC	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr1_+_229406847_229406935	0.191463	ACAGUAC	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr2_+_220094479_220094618	0.189307	ACAGUAC	ENST00000323348.5|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1 	ENST00000453432.1|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1 	ENST00000409849.1|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1 	ENST00000416565.1|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1 	ENST00000410034.3|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1 	ENST00000447157.1|ANKZF1|ENSG00000163516.9|ankyrin repeat and zinc finger domain containing 1
hg19_v2_chr18_+_13218769_13218792	0.187964	ACAGUAC	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr4_-_170192185_170192256	0.186662	ACAGUAC	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chr3_+_57261743_57261824	0.1854	ACAGUAC	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr6_+_34857019_34857117	0.177871	ACAGUAC	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr16_-_47177874_47177922	0.177487	ACAGUAC	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr20_+_39657454_39657470	0.177137	ACAGUAC	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr3_-_123168551_123168642	0.16895	ACAGUAC	ENST00000462833.1|ADCY5|ENSG00000173175.10|adenylate cyclase 5
hg19_v2_chr3_+_155588300_155588369	0.168538	ACAGUAC	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr13_+_49550015_49550070	0.166011	ACAGUAC	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr2_+_113033164_113033219	0.164079	ACAGUAC	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr9_+_2621798_2621834	0.15942	ACAGUAC	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr1_+_66999799_66999965	0.158756	ACAGUAC	ENST00000371035.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371036.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371037.4|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1
hg19_v2_chr1_-_85725316_85725367	0.158664	ACAGUAC	ENST00000344356.5|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52 	ENST00000471115.1|C1orf52|ENSG00000162642.9|chromosome 1 open reading frame 52
hg19_v2_chr7_+_73442102_73442139	0.157252	ACAGUAC	ENST00000445912.1|ELN|ENSG00000049540.12|elastin 	ENST00000252034.7|ELN|ENSG00000049540.12|elastin
hg19_v2_chr12_-_30848914_30848948	0.156851	ACAGUAC	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr4_+_1795012_1795039	0.147784	ACAGUAC	ENST00000481110.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000340107.4|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000440486.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000412135.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3
hg19_v2_chr2_-_179343268_179343338	0.146592	ACAGUAC	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr2_+_16080659_16080686	0.14657	ACAGUAC	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr8_+_26149007_26149061	0.146067	ACAGUAC	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr4_+_144106080_144106144	0.145758	ACAGUAC	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr1_+_147013182_147013329	0.145176	ACAGUAC	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr4_+_78078304_78078406	0.14413	ACAGUAC	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr8_-_66754172_66754201	0.143325	ACAGUAC	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr17_+_30677136_30677205	0.142694	ACAGUAC	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr2_-_172290482_172290596	0.141883	ACAGUAC	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr1_+_37940153_37940190	0.136988	ACAGUAC	ENST00000373087.6|ZC3H12A|ENSG00000163874.8|zinc finger CCCH-type containing 12A
hg19_v2_chr8_-_95961578_95961639	0.136661	ACAGUAC	ENST00000448464.2|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1 	ENST00000342697.4|TP53INP1|ENSG00000164938.9|tumor protein p53 inducible nuclear protein 1
hg19_v2_chr6_+_4021554_4021656	0.134581	ACAGUAC	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr6_+_28109703_28109716	0.13364	ACAGUAC	ENST00000457389.2|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8 	ENST00000330236.6|ZKSCAN8|ENSG00000198315.6|zinc finger with KRAB and SCAN domains 8
hg19_v2_chr5_-_40798263_40798300	0.13075	ACAGUAC	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr14_-_53619816_53620056	0.130229	ACAGUAC	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr10_-_126849068_126849138	0.127774	ACAGUAC	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr5_+_137688285_137688429	0.127712	ACAGUAC	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr2_-_166930131_166930149	0.126424	ACAGUAC	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr2_+_134877740_134877762	0.126053	ACAGUAC	ENST00000409645.1|MGAT5|ENSG00000152127.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
hg19_v2_chr5_+_172483347_172483407	0.12572	ACAGUAC	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr3_-_105587879_105587892	0.125044	ACAGUAC	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr1_+_200708671_200708744	0.121537	ACAGUAC	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr1_-_154531095_154531119	0.121142	ACAGUAC	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr5_+_86564739_86564791	0.117493	ACAGUAC	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr10_+_93558069_93558154	0.116122	ACAGUAC	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr2_+_128848881_128848908	0.116058	ACAGUAC	ENST00000259253.6|UGGT1|ENSG00000136731.8|UDP-glucose glycoprotein glucosyltransferase 1
hg19_v2_chr13_+_113622810_113622830	0.11603	ACAGUAC	ENST00000397030.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr16_-_69419871_69419927	0.115822	ACAGUAC	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr14_+_75230011_75230120	0.115266	ACAGUAC	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chrX_+_21857717_21857763	0.114589	ACAGUAC	ENST00000379484.5|MBTPS2|ENSG00000012174.7|membrane-bound transcription factor peptidase, site 2
hg19_v2_chr2_-_160472952_160473080	0.114547	ACAGUAC	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr5_+_139027877_139027918	0.114431	ACAGUAC	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr17_-_63557759_63557774	0.113455	ACAGUAC	ENST00000307078.5|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr4_-_114682936_114683083	0.112862	ACAGUAC	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr4_+_8271471_8271504	0.111892	ACAGUAC	ENST00000307358.2|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3 	ENST00000382512.3|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3
hg19_v2_chr5_+_112043186_112043225	0.109757	ACAGUAC	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr5_+_131993856_131993873	0.109253	ACAGUAC	ENST00000304506.3|IL13|ENSG00000169194.5|interleukin 13
hg19_v2_chr12_+_51985001_51985037	0.109011	ACAGUAC	ENST00000354534.6|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chr3_-_171178157_171178225	0.10839	ACAGUAC	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr13_+_20532807_20532841	0.108078	ACAGUAC	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr9_-_74525658_74525658	0.107805	ACAGUAC	ENST00000333421.6|ABHD17B|ENSG00000107362.9|abhydrolase domain containing 17B
hg19_v2_chr10_+_74033672_74033688	0.107387	ACAGUAC	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr11_+_98891797_98891920	0.107325	ACAGUAC	ENST00000527185.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000528682.1|CNTN5|ENSG00000149972.6|contactin 5 	ENST00000524871.1|CNTN5|ENSG00000149972.6|contactin 5
hg19_v2_chr12_+_19592602_19592648	0.104073	ACAGUAC	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr14_+_75745477_75745680	0.103279	ACAGUAC	ENST00000303562.4|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554617.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000554212.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000535987.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog 	ENST00000555242.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr10_+_115674530_115674530	0.102658	ACAGUAC	ENST00000451472.1|AL162407.1|ENSG00000234631.1|CDNA FLJ20147 fis, clone COL07954; HCG1781466; Uncharacterized protein
hg19_v2_chr12_-_118498958_118499021	0.102444	ACAGUAC	ENST00000315436.3|WSB2|ENSG00000176871.4|WD repeat and SOCS box containing 2
hg19_v2_chr2_+_120517174_120517207	0.102231	ACAGUAC	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr2_+_198365122_198365137	0.101798	ACAGUAC	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr2_+_71558858_71558936	0.101513	ACAGUAC	ENST00000437658.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000355812.3|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000377802.2|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000264447.4|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000409544.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000455226.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454278.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000417778.1|ZNF638|ENSG00000075292.14|zinc finger protein 638 	ENST00000454122.1|ZNF638|ENSG00000075292.14|zinc finger protein 638
hg19_v2_chr19_-_33793430_33793470	0.101118	ACAGUAC	ENST00000498907.2|CEBPA|ENSG00000245848.2|CCAAT/enhancer binding protein (C/EBP), alpha
hg19_v2_chr20_-_48729670_48729694	0.101002	ACAGUAC	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chrX_+_123095155_123095179	0.100647	ACAGUAC	ENST00000371160.1|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000435103.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr3_-_141944398_141944465	0.0999204	ACAGUAC	ENST00000544571.1|GK5|ENSG00000175066.11|glycerol kinase 5 (putative) 	ENST00000392993.2|GK5|ENSG00000175066.11|glycerol kinase 5 (putative)
hg19_v2_chr5_-_82373260_82373315	0.099716	ACAGUAC	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr2_-_242447983_242448107	0.0963462	ACAGUAC	ENST00000426941.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000405585.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000420551.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000535007.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000429279.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000442307.1|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000403346.3|STK25|ENSG00000115694.10|serine/threonine kinase 25 	ENST00000316586.4|STK25|ENSG00000115694.10|serine/threonine kinase 25
hg19_v2_chr18_-_45663666_45663732	0.0950779	ACAGUAC	ENST00000535628.2|ZBTB7C|ENSG00000184828.5|zinc finger and BTB domain containing 7C
hg19_v2_chr9_+_4985228_4985245	0.0946218	ACAGUAC	ENST00000381652.3|JAK2|ENSG00000096968.8|Janus kinase 2
hg19_v2_chr8_+_125486939_125487026	0.0934064	ACAGUAC	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr8_-_81787006_81787031	0.0929397	ACAGUAC	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr12_+_56401268_56401443	0.0928917	ACAGUAC	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr2_+_208394616_208394655	0.0923297	ACAGUAC	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr15_-_60690163_60690242	0.0906867	ACAGUAC	ENST00000558998.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560165.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559780.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559467.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559956.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000332680.4|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000396024.3|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000421017.2|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560466.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558132.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559113.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000557906.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558558.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560468.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559370.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558169.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000559725.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558985.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000451270.2|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr1_+_112162381_112162431	0.0905298	ACAGUAC	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr3_-_88108192_88108203	0.0903693	ACAGUAC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr1_-_208417620_208417680	0.0902317	ACAGUAC	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr2_-_201936302_201936416	0.0901578	ACAGUAC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr11_-_95522907_95522989	0.0891366	ACAGUAC	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr8_-_75233563_75233681	0.0886653	ACAGUAC	ENST00000342232.4|JPH1|ENSG00000104369.4|junctophilin 1
hg19_v2_chr15_-_61521495_61521518	0.0884297	ACAGUAC	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr19_+_16435625_16435682	0.0884065	ACAGUAC	ENST00000248071.5|KLF2|ENSG00000127528.5|Kruppel-like factor 2 	ENST00000592003.1|KLF2|ENSG00000127528.5|Kruppel-like factor 2
hg19_v2_chr4_+_144257915_144258009	0.0883176	ACAGUAC	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr8_-_122653630_122653661	0.0875758	ACAGUAC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr20_+_58508817_58508867	0.0862009	ACAGUAC	ENST00000358293.3|FAM217B|ENSG00000196227.6|family with sequence similarity 217, member B
hg19_v2_chr2_+_198380289_198380305	0.0855089	ACAGUAC	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr10_+_63661053_63661079	0.0852745	ACAGUAC	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr4_+_106816592_106816608	0.0850167	ACAGUAC	ENST00000379987.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000453617.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000427316.2|NPNT|ENSG00000168743.8|nephronectin 	ENST00000514622.1|NPNT|ENSG00000168743.8|nephronectin 	ENST00000305572.8|NPNT|ENSG00000168743.8|nephronectin
hg19_v2_chrX_+_70752917_70752933	0.0845912	ACAGUAC	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr10_+_115614370_115614436	0.0844698	ACAGUAC	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr22_-_19109901_19109967	0.0844094	ACAGUAC	ENST00000545799.1|DGCR2|ENSG00000070413.14|DiGeorge syndrome critical region gene 2 	ENST00000537045.1|DGCR2|ENSG00000070413.14|DiGeorge syndrome critical region gene 2 	ENST00000263196.7|DGCR2|ENSG00000070413.14|DiGeorge syndrome critical region gene 2
hg19_v2_chr6_+_7107999_7108054	0.0842727	ACAGUAC	ENST00000491191.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000379938.2|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000471433.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr15_-_82338460_82338496	0.0836693	ACAGUAC	ENST00000558133.1|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B 	ENST00000329713.4|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B
hg19_v2_chr18_-_53255766_53255860	0.0834883	ACAGUAC	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr14_-_82000140_82000229	0.0833707	ACAGUAC	ENST00000555824.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000557372.1|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans) 	ENST00000336735.4|SEL1L|ENSG00000071537.9|sel-1 suppressor of lin-12-like (C. elegans)
hg19_v2_chr6_+_19837592_19837621	0.083066	ACAGUAC	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr3_-_125094093_125094198	0.0822783	ACAGUAC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr10_-_11653753_11653806	0.082069	ACAGUAC	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr18_+_3451646_3451722	0.0817671	ACAGUAC	ENST00000345133.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000330513.5|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000549546.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr18_+_29598335_29598428	0.0816967	ACAGUAC	ENST00000217740.3|RNF125|ENSG00000101695.4|ring finger protein 125, E3 ubiquitin protein ligase
hg19_v2_chr2_+_60983361_60983418	0.0798882	ACAGUAC	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr20_-_48770174_48770243	0.0782964	ACAGUAC	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr5_+_96271141_96271168	0.078291	ACAGUAC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr20_+_39765581_39765646	0.0771561	ACAGUAC	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr22_-_22221900_22221970	0.0769042	ACAGUAC	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr2_+_204192942_204193038	0.0764024	ACAGUAC	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr17_+_16593539_16593639	0.0758145	ACAGUAC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr1_+_64239657_64239724	0.0752759	ACAGUAC	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr16_-_74808710_74808735	0.074661	ACAGUAC	ENST00000219368.3|FA2H|ENSG00000103089.4|fatty acid 2-hydroxylase 	ENST00000544337.1|FA2H|ENSG00000103089.4|fatty acid 2-hydroxylase
hg19_v2_chr1_+_36396677_36396749	0.0741265	ACAGUAC	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr2_-_100106419_100106522	0.0739984	ACAGUAC	ENST00000393445.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed) 	ENST00000258428.3|REV1|ENSG00000135945.5|REV1, polymerase (DNA directed)
hg19_v2_chr6_-_132834184_132834337	0.0737493	ACAGUAC	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr11_-_46722117_46722183	0.0712983	ACAGUAC	ENST00000311956.4|ARHGAP1|ENSG00000175220.7|Rho GTPase activating protein 1
hg19_v2_chr12_+_5019061_5019078	0.0702935	ACAGUAC	ENST00000382545.3|KCNA1|ENSG00000111262.4|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
hg19_v2_chr1_+_203764742_203764834	0.0697248	ACAGUAC	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr2_-_70780770_70780966	0.06963	ACAGUAC	ENST00000444975.1|TGFA|ENSG00000163235.11|transforming growth factor, alpha 	ENST00000445399.1|TGFA|ENSG00000163235.11|transforming growth factor, alpha 	ENST00000418333.2|TGFA|ENSG00000163235.11|transforming growth factor, alpha
hg19_v2_chr1_-_225840747_225840860	0.0695229	ACAGUAC	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr1_+_244816237_244816357	0.0687713	ACAGUAC	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr17_-_58603568_58603610	0.0687021	ACAGUAC	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr11_+_70116779_70116858	0.0680198	ACAGUAC	ENST00000253925.7|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 	ENST00000389547.3|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
hg19_v2_chr10_-_98346801_98346812	0.0674713	ACAGUAC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr13_-_107187462_107187462	0.0656626	ACAGUAC	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr2_-_114036488_114036527	0.0649745	ACAGUAC	ENST00000263335.7|PAX8|ENSG00000125618.12|paired box 8 	ENST00000397647.3|PAX8|ENSG00000125618.12|paired box 8 	ENST00000348715.5|PAX8|ENSG00000125618.12|paired box 8 	ENST00000429538.3|PAX8|ENSG00000125618.12|paired box 8
hg19_v2_chr2_-_216300784_216300895	0.0646612	ACAGUAC	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr6_+_64345698_64345750	0.0642445	ACAGUAC	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr14_+_45431379_45431465	0.0630946	ACAGUAC	ENST00000361577.3|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000361462.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000382233.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B
hg19_v2_chr4_-_71705590_71705662	0.0627201	ACAGUAC	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr2_+_191273052_191273121	0.0625251	ACAGUAC	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr2_+_135676381_135676435	0.0620992	ACAGUAC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chrX_+_44732757_44732860	0.0618185	ACAGUAC	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr4_-_66536057_66536071	0.061513	ACAGUAC	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr15_-_59225844_59225855	0.0614612	ACAGUAC	ENST00000380516.2|SLTM|ENSG00000137776.12|SAFB-like, transcription modulator
hg19_v2_chr1_-_85156216_85156240	0.0608535	ACAGUAC	ENST00000342203.3|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein 	ENST00000370612.4|SSX2IP|ENSG00000117155.12|synovial sarcoma, X breakpoint 2 interacting protein
hg19_v2_chr4_-_129208940_129208976	0.0600794	ACAGUAC	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr11_-_95657231_95657459	0.0593231	ACAGUAC	ENST00000409459.1|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000352297.7|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000393223.3|MTMR2|ENSG00000087053.14|myotubularin related protein 2 	ENST00000346299.5|MTMR2|ENSG00000087053.14|myotubularin related protein 2
hg19_v2_chr16_+_58497567_58497586	0.0591028	ACAGUAC	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chrX_-_51239425_51239453	0.0582537	ACAGUAC	ENST00000375992.3|NUDT11|ENSG00000196368.4|nudix (nucleoside diphosphate linked moiety X)-type motif 11
hg19_v2_chr19_+_32836499_32836625	0.0571135	ACAGUAC	ENST00000311921.4|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000544431.1|ZNF507|ENSG00000168813.12|zinc finger protein 507 	ENST00000355898.5|ZNF507|ENSG00000168813.12|zinc finger protein 507
hg19_v2_chr11_+_129939779_129939801	0.0557925	ACAGUAC	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr4_-_74124502_74124523	0.0547816	ACAGUAC	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr6_+_168227611_168227813	0.0534647	ACAGUAC	ENST00000344191.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000351017.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392108.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000366806.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392112.1|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400824.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000447894.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400822.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
hg19_v2_chr8_-_38239732_38239796	0.0534187	ACAGUAC	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chr15_-_77363513_77363570	0.0508382	ACAGUAC	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr3_-_52713729_52713784	0.0505943	ACAGUAC	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr7_-_148581251_148581347	0.0503018	ACAGUAC	ENST00000478654.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000460911.1|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila) 	ENST00000350995.2|EZH2|ENSG00000106462.6|enhancer of zeste homolog 2 (Drosophila)
hg19_v2_chr4_+_183164574_183164586	0.0502714	ACAGUAC	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr1_+_27022485_27022543	0.0492954	ACAGUAC	ENST00000324856.7|ARID1A|ENSG00000117713.13|AT rich interactive domain 1A (SWI-like)
hg19_v2_chr1_+_199996702_199996732	0.0492549	ACAGUAC	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr15_+_84322827_84322861	0.0487269	ACAGUAC	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr5_+_141488070_141488094	0.0484466	ACAGUAC	ENST00000253814.4|NDFIP1|ENSG00000131507.9|Nedd4 family interacting protein 1
hg19_v2_chr12_-_120806960_120806985	0.0483891	ACAGUAC	ENST00000257552.2|MSI1|ENSG00000135097.2|musashi RNA-binding protein 1
hg19_v2_chr20_+_8112824_8112925	0.046934	ACAGUAC	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr20_-_35274548_35274622	0.0461113	ACAGUAC	ENST00000262866.4|SLA2|ENSG00000101082.9|Src-like-adaptor 2
hg19_v2_chr18_-_29522989_29523104	0.046044	ACAGUAC	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr21_+_37692481_37692558	0.0459364	ACAGUAC	ENST00000400485.1|MORC3|ENSG00000159256.8|MORC family CW-type zinc finger 3
hg19_v2_chr1_-_26232951_26232959	0.0454894	ACAGUAC	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr17_+_54671047_54671075	0.0446074	ACAGUAC	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr1_+_15853308_15853413	0.0444002	ACAGUAC	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr2_+_14772810_14772853	0.0441484	ACAGUAC	ENST00000295092.2|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A 	ENST00000331243.4|FAM84A|ENSG00000162981.12|family with sequence similarity 84, member A
hg19_v2_chr17_-_3461092_3461126	0.0437954	ACAGUAC	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr2_+_196521458_196521491	0.0436646	ACAGUAC	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr1_+_176432298_176432319	0.0434222	ACAGUAC	ENST00000367661.3|PAPPA2|ENSG00000116183.6|pappalysin 2 	ENST00000367662.3|PAPPA2|ENSG00000116183.6|pappalysin 2
hg19_v2_chr8_+_133787586_133787673	0.0428338	ACAGUAC	ENST00000395379.1|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000395386.2|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1 	ENST00000337920.4|PHF20L1|ENSG00000129292.16|PHD finger protein 20-like 1
hg19_v2_chr20_+_32077880_32077951	0.0421124	ACAGUAC	ENST00000342704.6|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000375279.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr10_+_106400859_106400859	0.0420036	ACAGUAC	ENST00000369701.3|SORCS3|ENSG00000156395.8|sortilin-related VPS10 domain containing receptor 3
hg19_v2_chr1_+_113933581_113933611	0.041219	ACAGUAC	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr8_+_73449625_73449668	0.0411669	ACAGUAC	ENST00000523207.1|KCNB2|ENSG00000182674.5|potassium voltage-gated channel, Shab-related subfamily, member 2
hg19_v2_chr7_-_14029515_14029642	0.0406436	ACAGUAC	ENST00000430479.1|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000405218.2|ETV1|ENSG00000006468.9|ets variant 1 	ENST00000343495.5|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr15_-_55881135_55881192	0.0406352	ACAGUAC	ENST00000302000.6|PYGO1|ENSG00000171016.7|pygopus family PHD finger 1
hg19_v2_chr13_+_98605902_98605968	0.0393957	ACAGUAC	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chrX_+_133507327_133507386	0.039045	ACAGUAC	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chrX_-_128657457_128657477	0.0369475	ACAGUAC	ENST00000371121.3|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371123.1|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 	ENST00000371122.4|SMARCA1|ENSG00000102038.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1
hg19_v2_chr3_+_169684553_169684616	0.0361494	ACAGUAC	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr9_-_107690420_107690518	0.034497	ACAGUAC	ENST00000423487.2|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374733.1|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1 	ENST00000374736.3|ABCA1|ENSG00000165029.11|ATP-binding cassette, sub-family A (ABC1), member 1
hg19_v2_chr10_-_32345305_32345376	0.0343837	ACAGUAC	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr5_-_79287060_79287093	0.0335038	ACAGUAC	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr12_-_76478686_76478813	0.0333929	ACAGUAC	ENST00000261182.8|NAP1L1|ENSG00000187109.9|nucleosome assembly protein 1-like 1
hg19_v2_chr16_-_4323015_4323076	0.0330303	ACAGUAC	ENST00000204517.6|TFAP4|ENSG00000090447.7|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v2_chr18_-_21977748_21977823	0.0325592	ACAGUAC	ENST00000399441.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A 	ENST00000319481.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr17_+_61627814_61627871	0.0323721	ACAGUAC	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chr3_+_150321068_150321123	0.0318316	ACAGUAC	ENST00000471696.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000477889.1|SELT|ENSG00000198843.8|Selenoprotein T  	ENST00000485923.1|SELT|ENSG00000198843.8|Selenoprotein T
hg19_v2_chr6_+_71377473_71377520	0.0315051	ACAGUAC	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr5_+_149109825_149109907	0.0311452	ACAGUAC	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr20_-_57617831_57617964	0.0311355	ACAGUAC	ENST00000371033.5|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila) 	ENST00000355937.4|SLMO2|ENSG00000101166.11|slowmo homolog 2 (Drosophila)
hg19_v2_chr3_-_114790179_114790222	0.0307818	ACAGUAC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr21_-_46238034_46238051	0.0295934	ACAGUAC	ENST00000332859.6|SUMO3|ENSG00000184900.11|small ubiquitin-like modifier 3
hg19_v2_chr12_-_57119300_57119331	0.0289269	ACAGUAC	ENST00000546917.1|NACA|ENSG00000196531.6|nascent polypeptide-associated complex alpha subunit 	ENST00000454682.1|NACA|ENSG00000196531.6|nascent polypeptide-associated complex alpha subunit
hg19_v2_chr11_+_121322832_121322912	0.0281133	ACAGUAC	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr6_+_53659746_53659817	0.0279199	ACAGUAC	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr5_+_32585605_32585706	0.0277924	ACAGUAC	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr8_-_30585439_30585494	0.0276704	ACAGUAC	ENST00000221130.5|GSR|ENSG00000104687.8|glutathione reductase
hg19_v2_chr2_-_180129484_180129574	0.0271764	ACAGUAC	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr16_+_69221028_69221092	0.0269107	ACAGUAC	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chrX_+_103411189_103411301	0.026401	ACAGUAC	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr7_-_32931387_32931509	0.0262487	ACAGUAC	ENST00000304056.4|KBTBD2|ENSG00000170852.6|kelch repeat and BTB (POZ) domain containing 2
hg19_v2_chr15_-_79383102_79383127	0.0244029	ACAGUAC	ENST00000558480.2|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1 	ENST00000419573.3|RASGRF1|ENSG00000058335.11|Ras protein-specific guanine nucleotide-releasing factor 1
hg19_v2_chr7_-_44887620_44887710	0.0240432	ACAGUAC	ENST00000349299.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000521529.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000308153.4|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000350771.3|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000222690.6|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000381124.5|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000437072.1|H2AFV|ENSG00000105968.14|H2A histone family, member V 	ENST00000446531.1|H2AFV|ENSG00000105968.14|H2A histone family, member V
hg19_v2_chr6_-_24721054_24721074	0.0235861	ACAGUAC	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr8_-_70747205_70747299	0.0234407	ACAGUAC	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr12_-_31479045_31479074	0.0232866	ACAGUAC	ENST00000539409.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A 	ENST00000395766.1|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr3_-_74570291_74570291	0.0230831	ACAGUAC	ENST00000263665.6|CNTN3|ENSG00000113805.8|contactin 3 (plasmacytoma associated)
hg19_v2_chr1_+_162467595_162467655	0.0220248	ACAGUAC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr16_-_46723066_46723121	0.0218463	ACAGUAC	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr12_+_52203789_52203789	0.0214183	ACAGUAC	ENST00000599343.1|AC068987.1|ENSG00000260415.3|HCG1997999; cDNA FLJ33996 fis, clone DFNES2008881
hg19_v2_chr20_+_19867150_19867175	0.0212799	ACAGUAC	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr16_+_27561449_27561481	0.0211694	ACAGUAC	ENST00000261588.4|KIAA0556|ENSG00000047578.8|KIAA0556
hg19_v2_chr11_-_18765389_18765499	0.0210706	ACAGUAC	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr1_-_150552006_150552093	0.0209813	ACAGUAC	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr3_+_10857885_10857920	0.0207046	ACAGUAC	ENST00000254488.2|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11 	ENST00000454147.1|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11
hg19_v2_chr5_+_139175380_139175431	0.0206918	ACAGUAC	ENST00000274710.3|PSD2|ENSG00000146005.3|pleckstrin and Sec7 domain containing 2
hg19_v2_chr5_+_126112794_126112928	0.0196693	ACAGUAC	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr11_+_85956182_85956289	0.0194874	ACAGUAC	ENST00000327320.4|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000351625.6|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000534595.1|EED|ENSG00000074266.13|embryonic ectoderm development
hg19_v2_chr16_+_88493879_88493879	0.0191926	ACAGUAC	ENST00000565624.1|ZNF469|ENSG00000225614.2|zinc finger protein 469 	ENST00000437464.1|ZNF469|ENSG00000225614.2|zinc finger protein 469
hg19_v2_chr9_-_101471479_101471522	0.0188335	ACAGUAC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chrX_+_146993449_146993498	0.0185482	ACAGUAC	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr18_+_905104_905118	0.0179229	ACAGUAC	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr1_-_217804377_217804446	0.0178127	ACAGUAC	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr6_+_158733692_158733692	0.0168778	ACAGUAC	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr12_+_62860581_62860629	0.0162046	ACAGUAC	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr5_+_82767284_82767310	0.0147942	ACAGUAC	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr10_-_99393242_99393344	0.0146726	ACAGUAC	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr10_+_114206956_114207040	0.0137208	ACAGUAC	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr6_-_42419649_42419789	0.0132867	ACAGUAC	ENST00000372922.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000541110.1|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000372917.4|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chrX_+_118708493_118708506	0.0131214	ACAGUAC	ENST00000371558.2|UBE2A|ENSG00000077721.11|ubiquitin-conjugating enzyme E2A
hg19_v2_chr15_-_83876758_83876770	0.0129165	ACAGUAC	ENST00000299633.4|HDGFRP3|ENSG00000166503.4|Hepatoma-derived growth factor-related protein 3
hg19_v2_chr19_-_47157914_47157980	0.0119911	ACAGUAC	ENST00000300875.4|DACT3|ENSG00000197380.6|dishevelled-binding antagonist of beta-catenin 3
hg19_v2_chr7_+_2671568_2671606	0.0114604	ACAGUAC	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr18_-_18691739_18691812	0.0112402	ACAGUAC	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chrX_-_122866874_122866911	0.0105077	ACAGUAC	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr3_+_19988566_19988648	0.0103709	ACAGUAC	ENST00000273047.4|RAB5A|ENSG00000144566.6|RAB5A, member RAS oncogene family
hg19_v2_chr14_+_57857262_57857334	0.00996359	ACAGUAC	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr11_+_9406169_9406210	0.00989286	ACAGUAC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr7_-_5463175_5463195	0.00975668	ACAGUAC	ENST00000399537.4|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18 	ENST00000430969.1|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18
hg19_v2_chr4_-_54930790_54930857	0.00973902	ACAGUAC	ENST00000263921.3|CHIC2|ENSG00000109220.6|cysteine-rich hydrophobic domain 2
hg19_v2_chr20_-_4982132_4982164	0.00895011	ACAGUAC	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr6_+_160390102_160390147	0.0086419	ACAGUAC	ENST00000356956.1|IGF2R|ENSG00000197081.8|insulin-like growth factor 2 receptor
hg19_v2_chr17_+_35294075_35294102	0.00858344	ACAGUAC	ENST00000254457.5|LHX1|ENSG00000132130.7|LIM homeobox 1
hg19_v2_chrX_+_14547632_14547682	0.00743453	ACAGUAC	ENST00000218075.4|GLRA2|ENSG00000101958.9|glycine receptor, alpha 2
hg19_v2_chr3_+_8775466_8775552	0.00728487	ACAGUAC	ENST00000343849.2|CAV3|ENSG00000182533.6|caveolin 3 	ENST00000397368.2|CAV3|ENSG00000182533.6|caveolin 3
hg19_v2_chr5_-_38595498_38595514	0.00726828	ACAGUAC	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr4_+_72204755_72204778	0.00712292	ACAGUAC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr15_-_68498376_68498417	0.00667353	ACAGUAC	ENST00000540479.1|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000395465.3|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr2_+_160568978_160569064	0.00662653	ACAGUAC	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr8_+_67579807_67579887	0.00656492	ACAGUAC	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr22_+_35936915_35936939	0.00502657	ACAGUAC	ENST00000216127.4|RASD2|ENSG00000100302.6|RASD family, member 2
hg19_v2_chr9_+_78505581_78505621	0.00411828	ACAGUAC	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr20_+_60697480_60697583	0.00390535	ACAGUAC	ENST00000370915.1|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000253001.4|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000400318.2|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279068.6|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279069.7|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr6_-_35464727_35464738	0.00322467	ACAGUAC	ENST00000402886.3|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr4_+_15004165_15004298	0.00237177	ACAGUAC	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr1_-_155532484_155532605	0.00211757	ACAGUAC	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chrX_-_153363188_153363212	0.00061235	ACAGUAC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr8_-_13372395_13372429	8.05941e-06	ACAGUAC	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
