hg19_v2_chr5_-_43313574_43313614	0.277781	AGCCCUU	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr14_+_53019822_53019873	0.188689	AGCCCUU	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr10_-_116286656_116286693	0.180553	AGCCCUU	ENST00000428430.1|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1 	ENST00000369266.3|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1 	ENST00000392952.3|ABLIM1|ENSG00000099204.14|actin binding LIM protein 1
hg19_v2_chrX_-_117250740_117250828	0.168646	AGCCCUU	ENST00000371882.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000540167.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000545703.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr14_-_76127519_76127543	0.16074	AGCCCUU	ENST00000256319.6|C14orf1|ENSG00000133935.6|chromosome 14 open reading frame 1
hg19_v2_chr2_-_180129484_180129574	0.144574	AGCCCUU	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr13_-_108518986_108519083	0.134531	AGCCCUU	ENST00000375915.2|FAM155A|ENSG00000204442.2|family with sequence similarity 155, member A
hg19_v2_chr3_+_32147997_32148009	0.133641	AGCCCUU	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr9_-_74383799_74383818	0.124466	AGCCCUU	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr5_-_100238956_100238994	0.116048	AGCCCUU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr10_+_101419187_101419313	0.100825	AGCCCUU	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chr17_+_61086917_61086921	0.0989025	AGCCCUU	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr5_-_137368708_137368721	0.0979556	AGCCCUU	ENST00000033079.3|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr15_-_83621435_83621495	0.0979026	AGCCCUU	ENST00000450735.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000426485.1|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000399166.2|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila) 	ENST00000304231.8|HOMER2|ENSG00000103942.8|homer homolog 2 (Drosophila)
hg19_v2_chr18_-_74207146_74207183	0.0974971	AGCCCUU	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr1_+_178062855_178062903	0.0960697	AGCCCUU	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr11_-_22851367_22851411	0.094702	AGCCCUU	ENST00000354193.4|SVIP|ENSG00000198168.4|small VCP/p97-interacting protein
hg19_v2_chr4_-_111119804_111119832	0.0940516	AGCCCUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr5_-_38595498_38595514	0.0935769	AGCCCUU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr19_-_41196534_41196568	0.0918222	AGCCCUU	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr8_+_86089460_86089483	0.0915664	AGCCCUU	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr1_+_93913713_93913839	0.0882074	AGCCCUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr12_-_4758159_4758232	0.08382	AGCCCUU	ENST00000545990.2|AKAP3|ENSG00000111254.3|A kinase (PRKA) anchor protein 3
hg19_v2_chr9_+_133971909_133971943	0.0792745	AGCCCUU	ENST00000247291.3|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372302.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372300.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372298.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like
hg19_v2_chr4_-_76439596_76439643	0.0778548	AGCCCUU	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr1_+_61547894_61547980	0.0778502	AGCCCUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr15_-_48470558_48470714	0.0777813	AGCCCUU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr4_-_39640700_39640712	0.0755283	AGCCCUU	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr11_-_105892937_105893130	0.0749897	AGCCCUU	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr10_-_62704005_62704045	0.0745536	AGCCCUU	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr1_-_27816556_27816572	0.0733279	AGCCCUU	ENST00000536657.1|WASF2|ENSG00000158195.6|WAS protein family, member 2
hg19_v2_chr17_+_75136980_75137028	0.0726459	AGCCCUU	ENST00000585618.1|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae) 	ENST00000413679.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr8_-_91658303_91658327	0.0718283	AGCCCUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr8_-_81787006_81787031	0.0708326	AGCCCUU	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr12_-_12419703_12419811	0.0703742	AGCCCUU	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr13_-_49107303_49107369	0.0703533	AGCCCUU	ENST00000344532.3|RCBTB2|ENSG00000136161.8|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
hg19_v2_chr14_-_31676964_31677017	0.0684969	AGCCCUU	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr3_-_141868357_141868393	0.0662835	AGCCCUU	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr15_+_60296421_60296464	0.0657571	AGCCCUU	ENST00000396057.4|FOXB1|ENSG00000171956.5|forkhead box B1
hg19_v2_chr17_+_55333876_55333939	0.0642561	AGCCCUU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chrX_+_144908928_144908928	0.0630554	AGCCCUU	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr2_+_208394616_208394655	0.0629555	AGCCCUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr9_+_37800758_37800822	0.0611405	AGCCCUU	ENST00000242323.7|DCAF10|ENSG00000122741.11|DDB1 and CUL4 associated factor 10
hg19_v2_chr16_+_69599861_69599887	0.0608793	AGCCCUU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr7_+_89841000_89841023	0.0569028	AGCCCUU	ENST00000287908.3|STEAP2|ENSG00000157214.9|STEAP family member 2, metalloreductase
hg19_v2_chr1_+_160370344_160370406	0.0550596	AGCCCUU	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr7_-_132261253_132261323	0.0521722	AGCCCUU	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr3_+_188889737_188889767	0.051473	AGCCCUU	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr11_+_123396528_123396566	0.0511609	AGCCCUU	ENST00000322282.7|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B 	ENST00000529750.1|GRAMD1B|ENSG00000023171.10|GRAM domain containing 1B
hg19_v2_chr9_-_86153218_86153461	0.051097	AGCCCUU	ENST00000304195.3|FRMD3|ENSG00000172159.11|FERM domain containing 3 	ENST00000376438.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr13_-_31736027_31736064	0.0496639	AGCCCUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr16_-_17564738_17564834	0.0495872	AGCCCUU	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr6_-_108279369_108279422	0.0489615	AGCCCUU	ENST00000369002.4|SEC63|ENSG00000025796.9|SEC63 homolog (S. cerevisiae)
hg19_v2_chr2_+_153191706_153191751	0.0481526	AGCCCUU	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr15_-_50978965_50979012	0.0476802	AGCCCUU	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr12_-_49110613_49110681	0.0475367	AGCCCUU	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr5_+_118407053_118407239	0.046757	AGCCCUU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr10_-_33623564_33623603	0.0429077	AGCCCUU	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr11_-_123525289_123525341	0.0425684	AGCCCUU	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr5_+_65018017_65018088	0.0425481	AGCCCUU	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr17_+_46125707_46125746	0.0424949	AGCCCUU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr6_+_147525541_147525566	0.0414984	AGCCCUU	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr6_-_99873145_99873207	0.0402213	AGCCCUU	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr8_+_104152922_104152992	0.0393985	AGCCCUU	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr12_+_56367697_56367893	0.0390219	AGCCCUU	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr16_+_85646763_85646822	0.0389487	AGCCCUU	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr4_-_170533723_170533789	0.0386864	AGCCCUU	ENST00000510533.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000439128.2|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000511633.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000512193.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1 	ENST00000507142.1|NEK1|ENSG00000137601.11|NIMA-related kinase 1
hg19_v2_chr15_+_79724858_79724858	0.0382598	AGCCCUU	ENST00000305428.3|KIAA1024|ENSG00000169330.4|KIAA1024
hg19_v2_chr14_-_45431091_45431175	0.0381707	AGCCCUU	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr4_+_48343339_48343414	0.0364315	AGCCCUU	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chrX_-_13956737_13956808	0.0361317	AGCCCUU	ENST00000454189.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr4_+_6784401_6784510	0.0348034	AGCCCUU	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr16_-_4292071_4292088	0.0346924	AGCCCUU	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr3_+_179370517_179370543	0.0345306	AGCCCUU	ENST00000263966.3|USP13|ENSG00000058056.4|ubiquitin specific peptidase 13 (isopeptidase T-3)
hg19_v2_chr10_+_74451883_74451912	0.0341309	AGCCCUU	ENST00000373053.3|MCU|ENSG00000156026.10|mitochondrial calcium uniporter 	ENST00000357157.6|MCU|ENSG00000156026.10|mitochondrial calcium uniporter
hg19_v2_chr5_+_10353780_10353890	0.0337582	AGCCCUU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr14_+_45553296_45553340	0.0334406	AGCCCUU	ENST00000355765.6|PRPF39|ENSG00000185246.13|pre-mRNA processing factor 39 	ENST00000553605.1|PRPF39|ENSG00000185246.13|pre-mRNA processing factor 39
hg19_v2_chr12_-_81331697_81331733	0.0332223	AGCCCUU	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr12_+_95611516_95611527	0.032719	AGCCCUU	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr13_+_73302047_73302073	0.0324402	AGCCCUU	ENST00000377814.2|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000377815.3|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000390667.5|BORA|ENSG00000136122.11|bora, aurora kinase A activator
hg19_v2_chr10_+_64564469_64564535	0.0323725	AGCCCUU	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr17_+_11924129_11924200	0.0306726	AGCCCUU	ENST00000353533.5|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4 	ENST00000415385.3|MAP2K4|ENSG00000065559.10|mitogen-activated protein kinase kinase 4
hg19_v2_chr8_-_125384927_125384952	0.0303593	AGCCCUU	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr5_-_141704566_141704605	0.0298733	AGCCCUU	ENST00000344120.4|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila) 	ENST00000434127.2|SPRY4|ENSG00000187678.8|sprouty homolog 4 (Drosophila)
hg19_v2_chr14_+_103243813_103243955	0.0298159	AGCCCUU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr10_+_24755416_24755470	0.0290891	AGCCCUU	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr22_+_40390930_40390994	0.0288697	AGCCCUU	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr17_-_53800217_53800231	0.0285787	AGCCCUU	ENST00000424486.2|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr2_+_203499901_203499911	0.0285726	AGCCCUU	ENST00000303116.6|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B 	ENST00000392238.2|FAM117B|ENSG00000138439.10|family with sequence similarity 117, member B
hg19_v2_chr16_+_66878814_66878843	0.0279279	AGCCCUU	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr2_-_27362263_27362283	0.0276623	AGCCCUU	ENST00000432962.1|C2orf53|ENSG00000186143.6|chromosome 2 open reading frame 53 	ENST00000335524.3|C2orf53|ENSG00000186143.6|chromosome 2 open reading frame 53
hg19_v2_chr1_+_51701924_51702001	0.0270742	AGCCCUU	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr3_-_32022733_32022809	0.0267748	AGCCCUU	ENST00000438237.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10 	ENST00000396556.2|OSBPL10|ENSG00000144645.9|oxysterol binding protein-like 10
hg19_v2_chr9_+_129622904_129622956	0.0261812	AGCCCUU	ENST00000319119.4|ZBTB34|ENSG00000177125.5|zinc finger and BTB domain containing 34
hg19_v2_chr6_+_150464155_150464222	0.0260036	AGCCCUU	ENST00000361131.4|PPP1R14C|ENSG00000198729.4|protein phosphatase 1, regulatory (inhibitor) subunit 14C
hg19_v2_chr18_+_9136758_9136852	0.0257202	AGCCCUU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr4_-_90229142_90229217	0.0255805	AGCCCUU	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr12_-_56652111_56652183	0.0253671	AGCCCUU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr1_-_93426998_93427057	0.0248259	AGCCCUU	ENST00000370310.4|FAM69A|ENSG00000154511.7|family with sequence similarity 69, member A
hg19_v2_chr12_+_74931551_74931656	0.0247721	AGCCCUU	ENST00000519948.2|ATXN7L3B|ENSG00000253719.2|ataxin 7-like 3B
hg19_v2_chr12_-_65146636_65146651	0.0246048	AGCCCUU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr13_-_22033392_22033510	0.0245957	AGCCCUU	ENST00000320220.9|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000415724.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000422251.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000382466.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000542645.1|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20 	ENST00000400590.3|ZDHHC20|ENSG00000180776.11|zinc finger, DHHC-type containing 20
hg19_v2_chr1_-_180991978_180992085	0.0244493	AGCCCUU	ENST00000542060.1|STX6|ENSG00000135823.9|syntaxin 6 	ENST00000258301.5|STX6|ENSG00000135823.9|syntaxin 6
hg19_v2_chr1_+_173684047_173684136	0.0239098	AGCCCUU	ENST00000546011.1|KLHL20|ENSG00000076321.6|kelch-like family member 20 	ENST00000209884.4|KLHL20|ENSG00000076321.6|kelch-like family member 20
hg19_v2_chr2_+_178257372_178257523	0.0229167	AGCCCUU	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr6_+_170102210_170102275	0.0227745	AGCCCUU	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr19_+_48898132_48898132	0.0224697	AGCCCUU	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr9_-_80646374_80646374	0.0223327	AGCCCUU	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr15_+_50716576_50716624	0.0221291	AGCCCUU	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr16_+_19535133_19535231	0.0221127	AGCCCUU	ENST00000396212.2|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa 	ENST00000381396.5|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa
hg19_v2_chr19_-_42721819_42721883	0.0219305	AGCCCUU	ENST00000336034.4|DEDD2|ENSG00000160570.9|death effector domain containing 2 	ENST00000598200.1|DEDD2|ENSG00000160570.9|death effector domain containing 2 	ENST00000598727.1|DEDD2|ENSG00000160570.9|death effector domain containing 2 	ENST00000596251.1|DEDD2|ENSG00000160570.9|death effector domain containing 2
hg19_v2_chr9_+_136325089_136325144	0.0218525	AGCCCUU	ENST00000291722.7|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1 	ENST00000316948.4|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1 	ENST00000540581.1|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1
hg19_v2_chr1_-_20812690_20812763	0.0212592	AGCCCUU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr9_-_127952032_127952098	0.0212447	AGCCCUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr7_+_44240520_44240652	0.0203404	AGCCCUU	ENST00000496112.1|YKT6|ENSG00000106636.3|YKT6 v-SNARE homolog (S. cerevisiae) 	ENST00000223369.2|YKT6|ENSG00000106636.3|YKT6 v-SNARE homolog (S. cerevisiae)
hg19_v2_chr3_-_125094093_125094198	0.0201581	AGCCCUU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr11_+_61520075_61520136	0.0199953	AGCCCUU	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr16_-_57513657_57513826	0.0197491	AGCCCUU	ENST00000566936.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000568617.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000567276.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000569548.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000569250.1|DOK4|ENSG00000125170.6|docking protein 4 	ENST00000564378.1|DOK4|ENSG00000125170.6|docking protein 4
hg19_v2_chr1_+_180199393_180199426	0.0194282	AGCCCUU	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr12_+_121837844_121837892	0.0189274	AGCCCUU	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr9_-_72374848_72374894	0.0189148	AGCCCUU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr3_+_196466710_196466824	0.0186669	AGCCCUU	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr4_-_116034979_116035046	0.0186183	AGCCCUU	ENST00000264363.2|NDST4|ENSG00000138653.5|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
hg19_v2_chr13_+_42622781_42622889	0.0185896	AGCCCUU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr7_-_6388537_6388611	0.0184777	AGCCCUU	ENST00000313324.4|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A 	ENST00000530143.1|FAM220A|ENSG00000178397.8|family with sequence similarity 220, member A
hg19_v2_chr6_-_136871957_136872006	0.0184012	AGCCCUU	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr9_+_129567282_129567353	0.0183775	AGCCCUU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr1_+_206557366_206557368	0.0181764	AGCCCUU	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr2_+_113239710_113239753	0.018077	AGCCCUU	ENST00000233336.6|TTL|ENSG00000114999.7|tubulin tyrosine ligase
hg19_v2_chr10_+_97803151_97803348	0.0178299	AGCCCUU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr15_+_63569731_63569783	0.0176925	AGCCCUU	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr6_+_21593972_21594071	0.0174296	AGCCCUU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr14_+_85996471_85996497	0.01722	AGCCCUU	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr2_+_24714729_24714927	0.016756	AGCCCUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr14_+_23775971_23776000	0.0162132	AGCCCUU	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr1_+_205012293_205012326	0.0161496	AGCCCUU	ENST00000331830.4|CNTN2|ENSG00000184144.5|contactin 2 (axonal)
hg19_v2_chr4_+_41937131_41937211	0.0152358	AGCCCUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr14_+_45366472_45366514	0.0152169	AGCCCUU	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr5_+_65222299_65222361	0.0152142	AGCCCUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr18_+_29598335_29598428	0.0149944	AGCCCUU	ENST00000217740.3|RNF125|ENSG00000101695.4|ring finger protein 125, E3 ubiquitin protein ligase
hg19_v2_chr22_+_40573921_40573946	0.0148104	AGCCCUU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr8_-_139509065_139509113	0.0147638	AGCCCUU	ENST00000395297.1|FAM135B|ENSG00000147724.7|family with sequence similarity 135, member B
hg19_v2_chr6_+_37321748_37321819	0.0146429	AGCCCUU	ENST00000373479.4|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase 	ENST00000394443.4|RNF8|ENSG00000112130.12|ring finger protein 8, E3 ubiquitin protein ligase
hg19_v2_chr2_-_230933709_230933720	0.0145234	AGCCCUU	ENST00000436869.1|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14 	ENST00000295190.4|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14
hg19_v2_chr15_-_41408409_41408552	0.0145095	AGCCCUU	ENST00000361937.3|INO80|ENSG00000128908.11|INO80 complex subunit
hg19_v2_chr16_-_2246436_2246526	0.0136958	AGCCCUU	ENST00000343516.6|CASKIN1|ENSG00000167971.14|CASK interacting protein 1
hg19_v2_chr1_+_178694300_178694346	0.013589	AGCCCUU	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr9_+_127624387_127624418	0.0135585	AGCCCUU	ENST00000353214.2|ARPC5L|ENSG00000136950.9|actin related protein 2/3 complex, subunit 5-like
hg19_v2_chr4_+_3768075_3768125	0.013298	AGCCCUU	ENST00000509482.1|ADRA2C|ENSG00000184160.6|adrenoceptor alpha 2C 	ENST00000330055.5|ADRA2C|ENSG00000184160.6|adrenoceptor alpha 2C
hg19_v2_chr13_+_98086445_98086493	0.0132202	AGCCCUU	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr14_-_74253948_74253964	0.0123851	AGCCCUU	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chr1_-_245027833_245027855	0.0123218	AGCCCUU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr11_+_121322832_121322912	0.0122382	AGCCCUU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr11_-_17035943_17035990	0.0120914	AGCCCUU	ENST00000355661.3|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000532079.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000448080.2|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000531066.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7
hg19_v2_chr17_-_58469474_58469511	0.0118377	AGCCCUU	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr14_+_56585048_56585150	0.0112833	AGCCCUU	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr14_+_92588281_92588336	0.0112761	AGCCCUU	ENST00000298875.4|CPSF2|ENSG00000165934.8|cleavage and polyadenylation specific factor 2, 100kDa 	ENST00000553427.1|CPSF2|ENSG00000165934.8|cleavage and polyadenylation specific factor 2, 100kDa
hg19_v2_chr2_-_47168906_47168994	0.0108756	AGCCCUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr13_-_23949671_23949702	0.0103638	AGCCCUU	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr2_+_187558698_187558795	0.0101832	AGCCCUU	ENST00000304698.5|FAM171B|ENSG00000144369.8|family with sequence similarity 171, member B
hg19_v2_chr17_-_38821373_38821440	0.0101113	AGCCCUU	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr17_-_73775839_73775868	0.00996909	AGCCCUU	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr17_-_37607497_37607539	0.00994267	AGCCCUU	ENST00000394287.3|MED1|ENSG00000125686.7|mediator complex subunit 1 	ENST00000300651.6|MED1|ENSG00000125686.7|mediator complex subunit 1
hg19_v2_chr9_+_140772226_140772386	0.00987103	AGCCCUU	ENST00000277551.2|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371372.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000277549.5|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371363.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371357.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371355.4|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit
hg19_v2_chr4_+_38665810_38665827	0.00984903	AGCCCUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr8_-_89339705_89339721	0.00969872	AGCCCUU	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr15_+_44580899_44580947	0.00959448	AGCCCUU	ENST00000559222.1|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4 	ENST00000299957.6|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4
hg19_v2_chr12_+_110338063_110338105	0.00935317	AGCCCUU	ENST00000405876.4|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr20_+_43374421_43374436	0.00934088	AGCCCUU	ENST00000372861.3|KCNK15|ENSG00000124249.5|potassium channel, subfamily K, member 15
hg19_v2_chr14_-_93799360_93799438	0.00911686	AGCCCUU	ENST00000334746.5|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000554565.1|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7 	ENST00000298896.3|BTBD7|ENSG00000011114.10|BTB (POZ) domain containing 7
hg19_v2_chr5_-_41510656_41510713	0.00905496	AGCCCUU	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr6_+_158957431_158957468	0.00883546	AGCCCUU	ENST00000367090.3|TMEM181|ENSG00000146433.8|transmembrane protein 181
hg19_v2_chr20_+_49126881_49126936	0.00872617	AGCCCUU	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr1_-_217804377_217804446	0.00860522	AGCCCUU	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr17_+_5031687_5031687	0.00848064	AGCCCUU	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr11_-_130184555_130184581	0.00846322	AGCCCUU	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr11_-_64612041_64612116	0.0084493	AGCCCUU	ENST00000342711.5|CDC42BPG|ENSG00000171219.8|CDC42 binding protein kinase gamma (DMPK-like)
hg19_v2_chr10_-_98346801_98346812	0.00833081	AGCCCUU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chrX_+_16804544_16804613	0.0083043	AGCCCUU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr21_+_34915337_34915397	0.00830341	AGCCCUU	ENST00000290239.6|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381692.2|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000300278.4|SON|ENSG00000159140.13|SON DNA binding protein 	ENST00000381679.4|SON|ENSG00000159140.13|SON DNA binding protein
hg19_v2_chr6_+_126277842_126277993	0.00827501	AGCCCUU	ENST00000229633.5|HINT3|ENSG00000111911.5|histidine triad nucleotide binding protein 3
hg19_v2_chr15_+_44829255_44829331	0.0082438	AGCCCUU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr17_+_30677136_30677205	0.00796551	AGCCCUU	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr13_-_40177261_40177339	0.00787849	AGCCCUU	ENST00000379589.3|LHFP|ENSG00000183722.7|lipoma HMGIC fusion partner
hg19_v2_chr11_-_117186946_117186981	0.00785362	AGCCCUU	ENST00000313005.6|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1 	ENST00000528053.1|BACE1|ENSG00000186318.12|beta-site APP-cleaving enzyme 1
hg19_v2_chr1_-_220445757_220445819	0.00756441	AGCCCUU	ENST00000358951.2|RAB3GAP2|ENSG00000118873.11|RAB3 GTPase activating protein subunit 2 (non-catalytic)
hg19_v2_chr16_-_20911641_20911720	0.00752475	AGCCCUU	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chr10_+_121410882_121410902	0.00736005	AGCCCUU	ENST00000369085.3|BAG3|ENSG00000151929.5|BCL2-associated athanogene 3
hg19_v2_chr7_+_136553370_136553421	0.00727858	AGCCCUU	ENST00000445907.2|CHRM2|ENSG00000181072.7|cholinergic receptor, muscarinic 2
hg19_v2_chr20_+_30555805_30555984	0.00701786	AGCCCUU	ENST00000562532.2|XKR7|ENSG00000260903.2|XK, Kell blood group complex subunit-related family, member 7
hg19_v2_chr2_-_54087066_54087297	0.00649402	AGCCCUU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr5_-_141257954_141258006	0.00648876	AGCCCUU	ENST00000456271.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000394536.3|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000503492.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000287008.3|PCDH1|ENSG00000156453.9|protocadherin 1
hg19_v2_chr3_-_69101413_69101457	0.00630298	AGCCCUU	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr13_+_108870714_108870780	0.00604452	AGCCCUU	ENST00000375898.3|ABHD13|ENSG00000139826.5|abhydrolase domain containing 13
hg19_v2_chr22_-_31688431_31688520	0.00584492	AGCCCUU	ENST00000402249.3|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000443175.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000215912.5|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000441972.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr9_-_73736511_73736546	0.00579899	AGCCCUU	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr10_-_118764862_118764887	0.00518393	AGCCCUU	ENST00000260777.10|KIAA1598|ENSG00000187164.13|KIAA1598
hg19_v2_chr12_-_56583332_56583369	0.00511475	AGCCCUU	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr4_-_78740511_78740544	0.00508188	AGCCCUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr15_-_73925651_73925773	0.00503844	AGCCCUU	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr5_+_76145920_76145948	0.00492033	AGCCCUU	ENST00000317593.4|S100Z|ENSG00000171643.9|S100 calcium binding protein Z
hg19_v2_chr10_+_72972281_72972336	0.00488232	AGCCCUU	ENST00000335350.6|UNC5B|ENSG00000107731.8|unc-5 homolog B (C. elegans)
hg19_v2_chr5_+_40679584_40679600	0.00483742	AGCCCUU	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr9_-_124989804_124989865	0.00479188	AGCCCUU	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr11_-_3818932_3819022	0.004348	AGCCCUU	ENST00000324932.7|NUP98|ENSG00000110713.11|nucleoporin 98kDa 	ENST00000359171.4|NUP98|ENSG00000110713.11|nucleoporin 98kDa
hg19_v2_chr2_-_128643496_128643496	0.00429917	AGCCCUU	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chr21_+_17102311_17102496	0.00423091	AGCCCUU	ENST00000285679.6|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000351097.5|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000285681.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000400183.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25
hg19_v2_chr1_-_51984908_51984952	0.00398069	AGCCCUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr16_-_15736953_15737025	0.00391103	AGCCCUU	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr1_-_51425902_51425976	0.00377564	AGCCCUU	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr11_+_111807863_111807937	0.00355603	AGCCCUU	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr1_+_77333117_77333139	0.00354915	AGCCCUU	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr2_-_86564776_86564813	0.00352811	AGCCCUU	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr14_+_64932210_64932226	0.00348264	AGCCCUU	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr13_+_25875662_25875782	0.00316811	AGCCCUU	ENST00000381736.3|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000463407.1|NUPL1|ENSG00000139496.11|nucleoporin like 1 	ENST00000381718.3|NUPL1|ENSG00000139496.11|nucleoporin like 1
hg19_v2_chr16_+_28875126_28875195	0.00311403	AGCCCUU	ENST00000359285.5|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1 	ENST00000538342.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr1_+_200708671_200708744	0.00310786	AGCCCUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr5_-_77844974_77844994	0.00309213	AGCCCUU	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr5_+_179921430_179921461	0.00306671	AGCCCUU	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr16_+_28962128_28962335	0.00268175	AGCCCUU	ENST00000564978.1|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein 	ENST00000320805.4|NFATC2IP|ENSG00000176953.6|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
hg19_v2_chr7_+_77469439_77469497	0.00260724	AGCCCUU	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr20_+_33292068_33292164	0.00257435	AGCCCUU	ENST00000374810.3|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000374809.2|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2 	ENST00000451665.1|TP53INP2|ENSG00000078804.8|tumor protein p53 inducible nuclear protein 2
hg19_v2_chr19_+_54466179_54466294	0.00218028	AGCCCUU	ENST00000270458.2|CACNG8|ENSG00000142408.2|calcium channel, voltage-dependent, gamma subunit 8
hg19_v2_chr15_-_56535464_56535521	0.00193775	AGCCCUU	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chr4_+_177241094_177241173	0.00191428	AGCCCUU	ENST00000503362.1|SPCS3|ENSG00000129128.8|signal peptidase complex subunit 3 homolog (S. cerevisiae)
hg19_v2_chr5_-_107006596_107006651	0.00175108	AGCCCUU	ENST00000333274.6|EFNA5|ENSG00000184349.8|ephrin-A5
hg19_v2_chr10_+_114206956_114207040	0.00151222	AGCCCUU	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chrX_-_119077695_119077757	0.00134999	AGCCCUU	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr12_-_48499591_48499663	0.00100848	AGCCCUU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr1_-_211752073_211752084	0.000803644	AGCCCUU	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr15_+_44719394_44719579	0.000543537	AGCCCUU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr10_+_70661014_70661090	0.0005402	AGCCCUU	ENST00000373585.3|DDX50|ENSG00000107625.8|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
hg19_v2_chr1_-_161102421_161102478	9.10658e-05	AGCCCUU	ENST00000490843.2|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000368006.3|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000392188.1|DEDD|ENSG00000158796.12|death effector domain containing 	ENST00000545495.1|DEDD|ENSG00000158796.12|death effector domain containing
hg19_v2_chr4_-_68620053_68620112	6.8521e-05	AGCCCUU	ENST00000420975.2|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor 	ENST00000226413.4|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor
hg19_v2_chr6_+_96463840_96463892	4.74008e-05	AGCCCUU	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
