hg19_v2_chr6_-_29527702_29527702	2.13333	AGCUGCC	ENST00000377050.4|UBD|ENSG00000213886.3|ubiquitin D
hg19_v2_chr8_+_17354587_17354610	1.80622	AGCUGCC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr7_+_73703728_73703807	0.926544	AGCUGCC	ENST00000361545.5|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2 	ENST00000223398.6|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2
hg19_v2_chr1_-_212873267_212873332	0.637161	AGCUGCC	ENST00000243440.1|BATF3|ENSG00000123685.4|basic leucine zipper transcription factor, ATF-like 3
hg19_v2_chr2_-_208030647_208030689	0.608288	AGCUGCC	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr8_-_48651648_48651648	0.589462	AGCUGCC	ENST00000408965.3|CEBPD|ENSG00000221869.4|CCAAT/enhancer binding protein (C/EBP), delta
hg19_v2_chr14_+_70078303_70078321	0.56063	AGCUGCC	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chr11_-_64646086_64646191	0.560618	AGCUGCC	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr8_+_41435696_41435734	0.540779	AGCUGCC	ENST00000396987.3|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6 	ENST00000519853.1|AGPAT6|ENSG00000158669.7|1-acylglycerol-3-phosphate O-acyltransferase 6
hg19_v2_chr2_+_74425689_74425749	0.519218	AGCUGCC	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr10_-_105615164_105615323	0.500203	AGCUGCC	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr16_+_31044812_31044931	0.455229	AGCUGCC	ENST00000313843.3|STX4|ENSG00000103496.10|syntaxin 4
hg19_v2_chr11_-_126870655_126870673	0.448899	AGCUGCC	ENST00000525144.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr3_-_57199397_57199432	0.445199	AGCUGCC	ENST00000296318.7|IL17RD|ENSG00000144730.12|interleukin 17 receptor D
hg19_v2_chr12_-_56652111_56652183	0.4324	AGCUGCC	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr4_-_120550146_120550201	0.42406	AGCUGCC	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr1_-_204380919_204380953	0.383457	AGCUGCC	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr2_-_213403565_213403584	0.379382	AGCUGCC	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr21_+_40177143_40177231	0.378811	AGCUGCC	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr16_+_30935418_30935418	0.365611	AGCUGCC	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr11_-_75062730_75062775	0.362368	AGCUGCC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr16_-_87525651_87525651	0.360155	AGCUGCC	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr5_-_146833485_146833522	0.355188	AGCUGCC	ENST00000398514.3|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr14_+_93897199_93897222	0.329319	AGCUGCC	ENST00000553484.1|UNC79|ENSG00000133958.9|unc-79 homolog (C. elegans)
hg19_v2_chr17_-_36831156_36831187	0.317432	AGCUGCC	ENST00000325814.5|C17orf96|ENSG00000179294.5|chromosome 17 open reading frame 96
hg19_v2_chr9_+_34990219_34990312	0.310993	AGCUGCC	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr20_-_48330377_48330441	0.301073	AGCUGCC	ENST00000371711.4|B4GALT5|ENSG00000158470.5|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
hg19_v2_chr8_+_61591337_61591393	0.29623	AGCUGCC	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr8_+_1449532_1449532	0.293186	AGCUGCC	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr5_-_149492904_149492935	0.289259	AGCUGCC	ENST00000286301.3|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor 	ENST00000511344.1|CSF1R|ENSG00000182578.9|colony stimulating factor 1 receptor
hg19_v2_chr1_+_182992545_182992630	0.284151	AGCUGCC	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr1_-_244013384_244013430	0.278003	AGCUGCC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr1_+_192778161_192778180	0.274189	AGCUGCC	ENST00000235382.5|RGS2|ENSG00000116741.6|regulator of G-protein signaling 2, 24kDa
hg19_v2_chr11_+_118307179_118307228	0.273502	AGCUGCC	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr1_+_25071848_25071944	0.270973	AGCUGCC	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr12_-_50101165_50101259	0.268638	AGCUGCC	ENST00000352151.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000335154.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000293590.5|FMNL3|ENSG00000161791.9|formin-like 3
hg19_v2_chr14_+_33408449_33408525	0.26562	AGCUGCC	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
hg19_v2_chr9_-_117568365_117568406	0.264185	AGCUGCC	ENST00000374045.4|TNFSF15|ENSG00000181634.7|tumor necrosis factor (ligand) superfamily, member 15
hg19_v2_chr1_-_27481401_27481401	0.263625	AGCUGCC	ENST00000263980.3|SLC9A1|ENSG00000090020.6|solute carrier family 9, subfamily A (NHE1, cation proton antiporter 1), member 1
hg19_v2_chr21_-_45660723_45660831	0.252803	AGCUGCC	ENST00000344330.4|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand 	ENST00000407780.3|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand 	ENST00000400379.3|ICOSLG|ENSG00000160223.12|inducible T-cell co-stimulator ligand
hg19_v2_chr4_-_41216619_41216637	0.252317	AGCUGCC	ENST00000508676.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000506352.1|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2 	ENST00000295974.8|APBB2|ENSG00000163697.12|amyloid beta (A4) precursor protein-binding, family B, member 2
hg19_v2_chr16_+_30669720_30669771	0.242574	AGCUGCC	ENST00000356166.6|FBRS|ENSG00000156860.11|fibrosin
hg19_v2_chr17_-_74449252_74449294	0.240134	AGCUGCC	ENST00000319380.7|UBE2O|ENSG00000175931.8|ubiquitin-conjugating enzyme E2O
hg19_v2_chr11_+_58346584_58346607	0.232891	AGCUGCC	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr15_-_74988281_74988392	0.225542	AGCUGCC	ENST00000566828.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000563009.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000568176.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566243.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566219.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000426797.3|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000566119.1|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3 	ENST00000315127.4|EDC3|ENSG00000179151.7|enhancer of mRNA decapping 3
hg19_v2_chr1_+_184356188_184356200	0.222354	AGCUGCC	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr9_-_19786926_19786926	0.216882	AGCUGCC	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr19_+_42746927_42746927	0.210692	AGCUGCC	ENST00000378108.1|AC006486.1|ENSG00000204957.1|AC006486.1
hg19_v2_chr7_-_93204033_93204043	0.202957	AGCUGCC	ENST00000359558.2|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000360249.4|CALCR|ENSG00000004948.9|calcitonin receptor 	ENST00000426151.1|CALCR|ENSG00000004948.9|calcitonin receptor
hg19_v2_chr4_+_184826418_184826522	0.201443	AGCUGCC	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr22_+_38071615_38071652	0.198412	AGCUGCC	ENST00000215909.5|LGALS1|ENSG00000100097.7|lectin, galactoside-binding, soluble, 1
hg19_v2_chr6_+_117996621_117996665	0.196168	AGCUGCC	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr17_-_78009647_78009681	0.192587	AGCUGCC	ENST00000310924.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr4_-_153457197_153457268	0.189865	AGCUGCC	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr6_+_41040678_41040722	0.187994	AGCUGCC	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr20_+_18488137_18488255	0.184699	AGCUGCC	ENST00000450074.1|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000262544.2|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000336714.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae) 	ENST00000377475.3|SEC23B|ENSG00000101310.10|Sec23 homolog B (S. cerevisiae)
hg19_v2_chr17_-_8055747_8055758	0.182674	AGCUGCC	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr1_+_107683644_107683673	0.182152	AGCUGCC	ENST00000370067.1|NTNG1|ENSG00000162631.14|netrin G1
hg19_v2_chr6_-_62996066_62996137	0.179293	AGCUGCC	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr17_+_47074758_47074787	0.175785	AGCUGCC	ENST00000290341.3|IGF2BP1|ENSG00000159217.5|insulin-like growth factor 2 mRNA binding protein 1
hg19_v2_chr11_-_72145669_72145692	0.174536	AGCUGCC	ENST00000543042.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli) 	ENST00000294053.3|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr20_-_3767324_3767443	0.169802	AGCUGCC	ENST00000379751.4|CENPB|ENSG00000125817.7|centromere protein B, 80kDa
hg19_v2_chr22_-_39268308_39268319	0.16741	AGCUGCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr14_-_67982146_67982202	0.166828	AGCUGCC	ENST00000557779.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B 	ENST00000557006.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr12_+_56367697_56367893	0.163574	AGCUGCC	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chr1_+_27561007_27561061	0.16354	AGCUGCC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr6_+_96463840_96463892	0.160005	AGCUGCC	ENST00000302103.5|FUT9|ENSG00000172461.6|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
hg19_v2_chr14_-_104029013_104029168	0.157954	AGCUGCC	ENST00000299204.4|BAG5|ENSG00000166170.9|BCL2-associated athanogene 5 	ENST00000557666.1|BAG5|ENSG00000166170.9|BCL2-associated athanogene 5
hg19_v2_chr11_-_82611448_82611639	0.15786	AGCUGCC	ENST00000393399.2|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C) 	ENST00000313010.3|PRCP|ENSG00000137509.6|prolylcarboxypeptidase (angiotensinase C)
hg19_v2_chr11_-_62494821_62494953	0.157283	AGCUGCC	ENST00000301785.5|HNRNPUL2|ENSG00000214753.2|heterogeneous nuclear ribonucleoprotein U-like 2
hg19_v2_chr3_-_135914615_135914701	0.156802	AGCUGCC	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr9_+_132815985_132816018	0.156699	AGCUGCC	ENST00000372410.3|GPR107|ENSG00000148358.15|G protein-coupled receptor 107
hg19_v2_chr9_+_116207007_116207012	0.154518	AGCUGCC	ENST00000374140.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr1_+_180123969_180124032	0.152427	AGCUGCC	ENST00000367602.3|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1 	ENST00000367600.5|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr19_-_344786_344826	0.14869	AGCUGCC	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr10_+_26986582_26986640	0.146309	AGCUGCC	ENST00000376215.5|PDSS1|ENSG00000148459.11|prenyl (decaprenyl) diphosphate synthase, subunit 1 	ENST00000376203.5|PDSS1|ENSG00000148459.11|prenyl (decaprenyl) diphosphate synthase, subunit 1
hg19_v2_chr2_+_226265364_226265364	0.145906	AGCUGCC	ENST00000272907.6|NYAP2|ENSG00000144460.10|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
hg19_v2_chr1_-_222885770_222885866	0.145624	AGCUGCC	ENST00000355727.2|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated 	ENST00000340020.6|AIDA|ENSG00000186063.8|axin interactor, dorsalization associated
hg19_v2_chr2_-_169104651_169104651	0.145002	AGCUGCC	ENST00000355999.4|STK39|ENSG00000198648.6|serine threonine kinase 39
hg19_v2_chr5_-_142783175_142783297	0.143977	AGCUGCC	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr16_+_31085714_31085783	0.143741	AGCUGCC	ENST00000300850.5|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000564189.1|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000428260.1|ZNF646|ENSG00000167395.10|zinc finger protein 646
hg19_v2_chr1_+_183441600_183441616	0.143584	AGCUGCC	ENST00000367537.3|SMG7|ENSG00000116698.16|SMG7 nonsense mediated mRNA decay factor
hg19_v2_chr2_-_225450013_225450068	0.142537	AGCUGCC	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr15_+_51633826_51633858	0.137653	AGCUGCC	ENST00000335449.6|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr2_+_70142189_70142223	0.137489	AGCUGCC	ENST00000264444.2|MXD1|ENSG00000059728.6|MAX dimerization protein 1
hg19_v2_chr22_+_26879817_26879896	0.137061	AGCUGCC	ENST00000215917.7|SRRD|ENSG00000100104.8|SRR1 domain containing
hg19_v2_chr15_-_75871589_75871676	0.136075	AGCUGCC	ENST00000306726.2|PTPN9|ENSG00000169410.5|protein tyrosine phosphatase, non-receptor type 9
hg19_v2_chr2_-_175113301_175113426	0.134364	AGCUGCC	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr4_-_89205879_89205921	0.134157	AGCUGCC	ENST00000608933.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000315194.4|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K 	ENST00000514204.1|PPM1K|ENSG00000163644.10|protein phosphatase, Mg2+/Mn2+ dependent, 1K
hg19_v2_chr1_-_89357179_89357301	0.133608	AGCUGCC	ENST00000448623.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000418217.1|GTF2B|ENSG00000137947.7|general transcription factor IIB 	ENST00000370500.5|GTF2B|ENSG00000137947.7|general transcription factor IIB
hg19_v2_chr1_-_113249948_113250056	0.128176	AGCUGCC	ENST00000339083.7|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000369642.3|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr1_-_169863016_169863109	0.126283	AGCUGCC	ENST00000367772.4|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae) 	ENST00000367771.6|SCYL3|ENSG00000000457.9|SCY1-like 3 (S. cerevisiae)
hg19_v2_chr3_+_152879985_152880038	0.125808	AGCUGCC	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr12_+_56211703_56211858	0.125478	AGCUGCC	ENST00000243045.5|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000552672.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae) 	ENST00000550836.1|ORMDL2|ENSG00000123353.5|ORM1-like 2 (S. cerevisiae)
hg19_v2_chrX_-_108868390_108868407	0.125104	AGCUGCC	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr1_+_203444887_203444975	0.121803	AGCUGCC	ENST00000343110.2|PRELP|ENSG00000188783.5|proline/arginine-rich end leucine-rich repeat protein
hg19_v2_chr4_-_53525406_53525502	0.121504	AGCUGCC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr21_-_36260980_36261011	0.121223	AGCUGCC	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr2_+_115199876_115199919	0.121219	AGCUGCC	ENST00000436732.1|DPP10|ENSG00000175497.12|dipeptidyl-peptidase 10 (non-functional) 	ENST00000410059.1|DPP10|ENSG00000175497.12|dipeptidyl-peptidase 10 (non-functional)
hg19_v2_chr1_-_17766198_17766232	0.12097	AGCUGCC	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chrX_-_80065146_80065250	0.119401	AGCUGCC	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr2_-_127864577_127864688	0.118553	AGCUGCC	ENST00000376113.2|BIN1|ENSG00000136717.10|bridging integrator 1
hg19_v2_chr7_+_20370746_20370778	0.117952	AGCUGCC	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr9_+_116638562_116638606	0.116773	AGCUGCC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr2_+_166326157_166326216	0.114952	AGCUGCC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr19_+_54705025_54705034	0.113442	AGCUGCC	ENST00000441429.1|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr7_-_44924939_44924993	0.113112	AGCUGCC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr1_+_2985760_2985775	0.112847	AGCUGCC	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr5_+_177540444_177540506	0.11261	AGCUGCC	ENST00000274605.5|N4BP3|ENSG00000145911.5|NEDD4 binding protein 3
hg19_v2_chr17_+_34058639_34058724	0.112596	AGCUGCC	ENST00000268864.3|RASL10B|ENSG00000141150.3|RAS-like, family 10, member B
hg19_v2_chr11_+_65479462_65479517	0.111968	AGCUGCC	ENST00000377046.3|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000352980.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5 	ENST00000341318.4|KAT5|ENSG00000172977.8|K(lysine) acetyltransferase 5
hg19_v2_chr9_+_87284622_87284653	0.111653	AGCUGCC	ENST00000395882.1|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr15_+_44719394_44719579	0.110892	AGCUGCC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr1_-_28415204_28415227	0.10973	AGCUGCC	ENST00000373871.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr1_-_204329013_204329086	0.10906	AGCUGCC	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr22_-_47134077_47134216	0.105411	AGCUGCC	ENST00000541677.1|CERK|ENSG00000100422.9|ceramide kinase 	ENST00000216264.8|CERK|ENSG00000100422.9|ceramide kinase
hg19_v2_chr7_+_128577972_128578047	0.103855	AGCUGCC	ENST00000357234.5|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000477535.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000479582.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000464557.1|IRF5|ENSG00000128604.14|interferon regulatory factor 5 	ENST00000402030.2|IRF5|ENSG00000128604.14|interferon regulatory factor 5
hg19_v2_chr22_-_36236265_36236481	0.103163	AGCUGCC	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr12_+_48166978_48167047	0.101416	AGCUGCC	ENST00000442218.2|SLC48A1|ENSG00000211584.9|solute carrier family 48 (heme transporter), member 1
hg19_v2_chr17_-_3749515_3749551	0.100472	AGCUGCC	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr1_-_8938736_8938756	0.100109	AGCUGCC	ENST00000234590.4|ENO1|ENSG00000074800.9|enolase 1, (alpha)
hg19_v2_chr2_-_128643496_128643496	0.0990822	AGCUGCC	ENST00000272647.5|AMMECR1L|ENSG00000144233.5|AMMECR1-like
hg19_v2_chr15_+_41851211_41851232	0.09839	AGCUGCC	ENST00000263798.3|TYRO3|ENSG00000092445.7|TYRO3 protein tyrosine kinase
hg19_v2_chr4_-_39979576_39979588	0.097835	AGCUGCC	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr10_-_120514720_120514758	0.0971085	AGCUGCC	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr1_-_39339777_39339777	0.0968871	AGCUGCC	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr9_+_101867359_101867376	0.0966853	AGCUGCC	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr10_-_118032697_118032796	0.095815	AGCUGCC	ENST00000439649.3|GFRA1|ENSG00000151892.10|GDNF family receptor alpha 1
hg19_v2_chr5_-_177580777_177580830	0.0953854	AGCUGCC	ENST00000314397.4|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr3_+_11034403_11034492	0.0947483	AGCUGCC	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr2_-_25194963_25194976	0.0947187	AGCUGCC	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr1_-_205912577_205912593	0.0937338	AGCUGCC	ENST00000367135.3|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9 	ENST00000367134.2|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr10_-_3827417_3827473	0.0931364	AGCUGCC	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr1_+_63788730_63788730	0.0920112	AGCUGCC	ENST00000371116.2|FOXD3|ENSG00000187140.4|forkhead box D3
hg19_v2_chr1_-_19283163_19283180	0.0913577	AGCUGCC	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr17_-_16256718_16256813	0.091109	AGCUGCC	ENST00000476243.1|CENPV|ENSG00000166582.5|centromere protein V 	ENST00000299736.4|CENPV|ENSG00000166582.5|centromere protein V
hg19_v2_chrX_+_131157290_131157309	0.0908564	AGCUGCC	ENST00000394334.2|MST4|ENSG00000134602.11|Serine/threonine-protein kinase MST4
hg19_v2_chr20_-_30795511_30795594	0.0906695	AGCUGCC	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr16_+_66878814_66878843	0.08954	AGCUGCC	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr10_-_88281494_88281572	0.0894742	AGCUGCC	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr1_-_162381907_162381939	0.0869688	AGCUGCC	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr8_+_98656336_98656535	0.0859141	AGCUGCC	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr12_+_49372251_49372398	0.0838972	AGCUGCC	ENST00000293549.3|WNT1|ENSG00000125084.7|wingless-type MMTV integration site family, member 1
hg19_v2_chr9_-_132404374_132404450	0.0831521	AGCUGCC	ENST00000277459.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000450050.2|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6 	ENST00000277458.4|ASB6|ENSG00000148331.7|ankyrin repeat and SOCS box containing 6
hg19_v2_chr19_+_46010674_46010772	0.0830352	AGCUGCC	ENST00000245932.6|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein 	ENST00000592139.1|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein 	ENST00000590603.1|VASP|ENSG00000125753.9|vasodilator-stimulated phosphoprotein
hg19_v2_chr3_-_52312636_52312673	0.0825827	AGCUGCC	ENST00000296490.3|WDR82|ENSG00000164091.7|WD repeat domain 82
hg19_v2_chr12_-_31945172_31945178	0.0821789	AGCUGCC	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr16_+_30710462_30710498	0.081964	AGCUGCC	ENST00000262518.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000395059.2|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein 	ENST00000344771.4|SRCAP|ENSG00000080603.12|Snf2-related CREBBP activator protein
hg19_v2_chr9_+_114659046_114659102	0.0815822	AGCUGCC	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr19_-_5680231_5680277	0.0814083	AGCUGCC	ENST00000587950.1|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr9_+_36136700_36136742	0.0808617	AGCUGCC	ENST00000396613.3|GLIPR2|ENSG00000122694.11|GLI pathogenesis-related 2 	ENST00000377959.1|GLIPR2|ENSG00000122694.11|GLI pathogenesis-related 2 	ENST00000377960.4|GLIPR2|ENSG00000122694.11|GLI pathogenesis-related 2
hg19_v2_chr12_+_53574464_53574539	0.0794025	AGCUGCC	ENST00000416904.3|ZNF740|ENSG00000139651.9|zinc finger protein 740
hg19_v2_chr4_+_94750014_94750042	0.0785557	AGCUGCC	ENST00000306011.3|ATOH1|ENSG00000172238.3|atonal homolog 1 (Drosophila)
hg19_v2_chr16_+_24266874_24266917	0.0781516	AGCUGCC	ENST00000005284.3|CACNG3|ENSG00000006116.3|calcium channel, voltage-dependent, gamma subunit 3
hg19_v2_chr2_-_71454185_71454242	0.0773727	AGCUGCC	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr2_+_178077477_178077525	0.0764401	AGCUGCC	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr11_-_118966167_118966182	0.0759856	AGCUGCC	ENST00000530167.1|H2AFX|ENSG00000188486.3|H2A histone family, member X
hg19_v2_chr10_-_99094458_99094500	0.0756169	AGCUGCC	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr3_-_49823941_49823990	0.0717351	AGCUGCC	ENST00000321599.4|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000395238.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000468463.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000460540.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1
hg19_v2_chr11_+_46740730_46740859	0.0712279	AGCUGCC	ENST00000311907.5|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000530231.1|F2|ENSG00000180210.10|coagulation factor II (thrombin) 	ENST00000442468.1|F2|ENSG00000180210.10|coagulation factor II (thrombin)
hg19_v2_chr7_-_72993033_72993121	0.0708943	AGCUGCC	ENST00000305632.5|TBL2|ENSG00000106638.11|transducin (beta)-like 2
hg19_v2_chr1_+_16693578_16693760	0.0690981	AGCUGCC	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr1_+_214161272_214161322	0.0685029	AGCUGCC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr12_-_6809958_6809996	0.0673974	AGCUGCC	ENST00000320591.5|PIANP|ENSG00000139200.9|PILR alpha associated neural protein 	ENST00000534837.1|PIANP|ENSG00000139200.9|PILR alpha associated neural protein
hg19_v2_chr7_-_16505440_16505474	0.067229	AGCUGCC	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr6_-_43478239_43478424	0.0670038	AGCUGCC	ENST00000372441.1|LRRC73|ENSG00000204052.4|leucine rich repeat containing 73
hg19_v2_chr15_-_42749711_42749754	0.0665737	AGCUGCC	ENST00000565611.1|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000263805.4|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000565948.1|ZNF106|ENSG00000103994.12|zinc finger protein 106
hg19_v2_chr1_+_6673745_6673830	0.0637569	AGCUGCC	ENST00000377648.4|PHF13|ENSG00000116273.5|PHD finger protein 13
hg19_v2_chr8_-_101965146_101965236	0.0627611	AGCUGCC	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr1_-_15911510_15911605	0.0627249	AGCUGCC	ENST00000375826.3|AGMAT|ENSG00000116771.5|agmatine ureohydrolase (agmatinase)
hg19_v2_chr1_-_175161890_175161929	0.059566	AGCUGCC	ENST00000545251.2|KIAA0040|ENSG00000235750.5|KIAA0040 	ENST00000423313.1|KIAA0040|ENSG00000235750.5|KIAA0040
hg19_v2_chr4_+_184020398_184020463	0.0593672	AGCUGCC	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr11_+_64948665_64948748	0.0583957	AGCUGCC	ENST00000533820.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr3_+_196295482_196295559	0.0582627	AGCUGCC	ENST00000440469.1|FBXO45|ENSG00000174013.7|F-box protein 45 	ENST00000311630.6|FBXO45|ENSG00000174013.7|F-box protein 45
hg19_v2_chr15_-_72410109_72410161	0.0579931	AGCUGCC	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr1_-_24306798_24306828	0.0573144	AGCUGCC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr3_+_38495333_38495422	0.0565501	AGCUGCC	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr10_+_99205959_99205981	0.0562338	AGCUGCC	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr21_-_28338732_28338832	0.0556964	AGCUGCC	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr15_-_83316254_83316368	0.0543751	AGCUGCC	ENST00000567678.1|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1 	ENST00000450751.2|CPEB1|ENSG00000214575.5|cytoplasmic polyadenylation element binding protein 1
hg19_v2_chr1_+_231297798_231297858	0.0542532	AGCUGCC	ENST00000444294.3|TRIM67|ENSG00000119283.11|tripartite motif containing 67
hg19_v2_chr7_+_2671568_2671606	0.0531667	AGCUGCC	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr4_-_111119804_111119832	0.0525016	AGCUGCC	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr2_+_85766280_85766299	0.052109	AGCUGCC	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr12_-_93835665_93835750	0.0516942	AGCUGCC	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr2_-_71062938_71062952	0.0515198	AGCUGCC	ENST00000410009.3|CD207|ENSG00000116031.7|CD207 molecule, langerin
hg19_v2_chr20_-_3185279_3185343	0.0512473	AGCUGCC	ENST00000354488.3|DDRGK1|ENSG00000198171.8|DDRGK domain containing 1 	ENST00000380201.2|DDRGK1|ENSG00000198171.8|DDRGK domain containing 1
hg19_v2_chr7_-_27170352_27170418	0.0511528	AGCUGCC	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr16_+_10971037_10971076	0.0507488	AGCUGCC	ENST00000324288.8|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator 	ENST00000381835.5|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator
hg19_v2_chr2_-_230933709_230933720	0.0505587	AGCUGCC	ENST00000436869.1|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14 	ENST00000295190.4|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14
hg19_v2_chrX_-_54070607_54070726	0.04941	AGCUGCC	ENST00000338154.6|PHF8|ENSG00000172943.14|PHD finger protein 8 	ENST00000338946.6|PHF8|ENSG00000172943.14|PHD finger protein 8
hg19_v2_chr10_+_72238517_72238595	0.0493612	AGCUGCC	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr5_+_142149955_142150000	0.0491998	AGCUGCC	ENST00000378004.3|ARHGAP26|ENSG00000145819.11|Rho GTPase activating protein 26
hg19_v2_chr16_+_66400533_66400545	0.0491918	AGCUGCC	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr20_+_19997948_19998034	0.048358	AGCUGCC	ENST00000310450.4|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit 	ENST00000398602.2|NAA20|ENSG00000173418.7|N(alpha)-acetyltransferase 20, NatB catalytic subunit
hg19_v2_chr15_-_37390482_37390572	0.0483366	AGCUGCC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr3_+_8775466_8775552	0.0476183	AGCUGCC	ENST00000343849.2|CAV3|ENSG00000182533.6|caveolin 3 	ENST00000397368.2|CAV3|ENSG00000182533.6|caveolin 3
hg19_v2_chr11_-_31839488_31839515	0.047382	AGCUGCC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr6_-_152958521_152958549	0.0470821	AGCUGCC	ENST00000367255.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000265368.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000448038.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000341594.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr1_-_155211017_155211062	0.0467554	AGCUGCC	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr17_+_60536002_60536040	0.0467423	AGCUGCC	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr11_-_115375107_115375283	0.046637	AGCUGCC	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr14_+_71108460_71108508	0.0459353	AGCUGCC	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chrX_+_108780062_108780105	0.0426156	AGCUGCC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr11_-_47788847_47788919	0.0405512	AGCUGCC	ENST00000263773.5|FNBP4|ENSG00000109920.8|formin binding protein 4
hg19_v2_chr8_-_119634141_119634234	0.0404516	AGCUGCC	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr16_-_4664860_4664927	0.0398246	AGCUGCC	ENST00000587615.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000587649.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000590965.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000591401.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000283474.7|UBALD1|ENSG00000153443.8|UBA-like domain containing 1
hg19_v2_chr5_+_56469775_56469837	0.0393818	AGCUGCC	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr17_+_48912744_48912771	0.0390151	AGCUGCC	ENST00000311378.4|WFIKKN2|ENSG00000173714.7|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2
hg19_v2_chr12_+_53774423_53774658	0.0385912	AGCUGCC	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr1_+_114472222_114472377	0.0374413	AGCUGCC	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr1_-_154155595_154155673	0.0369912	AGCUGCC	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr10_+_96162242_96162283	0.0369255	AGCUGCC	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr11_-_88796803_88796827	0.0363556	AGCUGCC	ENST00000418177.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5 	ENST00000455756.2|GRM5|ENSG00000168959.10|glutamate receptor, metabotropic 5
hg19_v2_chr5_-_78809950_78810040	0.0359378	AGCUGCC	ENST00000334082.6|HOMER1|ENSG00000152413.10|homer homolog 1 (Drosophila)
hg19_v2_chr21_-_32931290_32931341	0.0355647	AGCUGCC	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr10_+_78078088_78078092	0.0345576	AGCUGCC	ENST00000496424.2|C10orf11|ENSG00000148655.10|chromosome 10 open reading frame 11
hg19_v2_chr11_+_65339820_65340051	0.0342357	AGCUGCC	ENST00000316409.2|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B 	ENST00000449319.2|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B 	ENST00000530349.1|FAM89B|ENSG00000176973.7|family with sequence similarity 89, member B
hg19_v2_chr7_+_39989611_39989716	0.034201	AGCUGCC	ENST00000181839.4|CDK13|ENSG00000065883.10|cyclin-dependent kinase 13
hg19_v2_chr12_+_8234807_8234855	0.0338982	AGCUGCC	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr6_+_131148538_131148554	0.0334975	AGCUGCC	ENST00000541421.2|SMLR1|ENSG00000256162.2|small leucine-rich protein 1
hg19_v2_chr11_-_27528301_27528336	0.0334207	AGCUGCC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr12_+_56473628_56473680	0.0332549	AGCUGCC	ENST00000549282.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000549061.1|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3 	ENST00000267101.3|ERBB3|ENSG00000065361.10|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
hg19_v2_chr4_+_40058411_40058557	0.0327594	AGCUGCC	ENST00000261435.6|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2 	ENST00000515550.1|N4BP2|ENSG00000078177.9|NEDD4 binding protein 2
hg19_v2_chr3_+_42695176_42695201	0.0310836	AGCUGCC	ENST00000232974.6|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47 	ENST00000457842.3|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47
hg19_v2_chr2_+_153191706_153191751	0.0284264	AGCUGCC	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr21_+_33245548_33245628	0.0275729	AGCUGCC	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chrX_-_19905703_19905724	0.0270314	AGCUGCC	ENST00000397821.3|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr4_+_41937131_41937211	0.0258183	AGCUGCC	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr3_-_48885228_48885327	0.0250684	AGCUGCC	ENST00000454963.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000296446.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000419216.1|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha 	ENST00000265563.8|PRKAR2A|ENSG00000114302.11|protein kinase, cAMP-dependent, regulatory, type II, alpha
hg19_v2_chr1_+_171810606_171810649	0.0241969	AGCUGCC	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr19_-_46234119_46234189	0.0239495	AGCUGCC	ENST00000317683.3|FBXO46|ENSG00000177051.5|F-box protein 46
hg19_v2_chr20_-_39995467_39995482	0.0231349	AGCUGCC	ENST00000332312.3|EMILIN3|ENSG00000183798.4|elastin microfibril interfacer 3
hg19_v2_chr1_-_43424500_43424546	0.0224177	AGCUGCC	ENST00000415851.2|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1 	ENST00000426263.3|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1 	ENST00000372500.3|SLC2A1|ENSG00000117394.15|solute carrier family 2 (facilitated glucose transporter), member 1
hg19_v2_chr2_+_74881355_74881397	0.021907	AGCUGCC	ENST00000357877.2|SEMA4F|ENSG00000135622.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
hg19_v2_chr12_+_113796347_113796404	0.0211204	AGCUGCC	ENST00000545182.2|PLBD2|ENSG00000151176.3|phospholipase B domain containing 2 	ENST00000280800.3|PLBD2|ENSG00000151176.3|phospholipase B domain containing 2
hg19_v2_chr4_+_17616253_17616275	0.0210981	AGCUGCC	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr17_-_7590745_7590856	0.020613	AGCUGCC	ENST00000514944.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000503591.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000455263.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000420246.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000445888.2|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000509690.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000604348.1|TP53|ENSG00000141510.11|tumor protein p53 	ENST00000269305.4|TP53|ENSG00000141510.11|tumor protein p53
hg19_v2_chr5_-_175964366_175964429	0.0204719	AGCUGCC	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr1_-_33502441_33502500	0.0195344	AGCUGCC	ENST00000548033.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000487289.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000373449.2|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000480134.1|AK2|ENSG00000004455.12|adenylate kinase 2 	ENST00000467905.1|AK2|ENSG00000004455.12|adenylate kinase 2
hg19_v2_chr7_+_100797678_100797708	0.0194047	AGCUGCC	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr1_+_181003067_181003149	0.0190514	AGCUGCC	ENST00000434571.2|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367579.3|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000282990.6|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related 	ENST00000367580.5|MR1|ENSG00000153029.10|major histocompatibility complex, class I-related
hg19_v2_chr2_-_25475120_25475180	0.018731	AGCUGCC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr14_+_55738021_55738176	0.0182171	AGCUGCC	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr11_+_9406169_9406210	0.017744	AGCUGCC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr16_-_4292071_4292088	0.0172028	AGCUGCC	ENST00000399609.3|SRL|ENSG00000185739.9|sarcalumenin
hg19_v2_chr20_+_48599506_48599536	0.0164382	AGCUGCC	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr5_-_41510656_41510713	0.0163635	AGCUGCC	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr2_+_232651124_232651176	0.0162837	AGCUGCC	ENST00000350033.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000412591.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000410017.1|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B 	ENST00000373608.3|COPS7B|ENSG00000144524.13|COP9 signalosome subunit 7B
hg19_v2_chr16_+_12995468_12995497	0.0155571	AGCUGCC	ENST00000424107.3|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558583.1|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558318.1|SHISA9|ENSG00000237515.6|shisa family member 9
hg19_v2_chr2_-_47798044_47798132	0.0151587	AGCUGCC	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr13_+_47127293_47127321	0.0151131	AGCUGCC	ENST00000311191.6|LRCH1|ENSG00000136141.10|leucine-rich repeats and calponin homology (CH) domain containing 1
hg19_v2_chr1_-_183604794_183604908	0.0145797	AGCUGCC	ENST00000367534.1|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000359856.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa 	ENST00000294742.6|ARPC5|ENSG00000162704.11|actin related protein 2/3 complex, subunit 5, 16kDa
hg19_v2_chr16_-_58663720_58663790	0.014276	AGCUGCC	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr7_+_30323923_30324060	0.0136458	AGCUGCC	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr5_-_141257954_141258006	0.010546	AGCUGCC	ENST00000456271.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000394536.3|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000503492.1|PCDH1|ENSG00000156453.9|protocadherin 1 	ENST00000287008.3|PCDH1|ENSG00000156453.9|protocadherin 1
hg19_v2_chr1_-_119683251_119683298	0.0105302	AGCUGCC	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr1_-_17445930_17445954	0.0105208	AGCUGCC	ENST00000375486.4|PADI2|ENSG00000117115.8|peptidyl arginine deiminase, type II 	ENST00000375481.1|PADI2|ENSG00000117115.8|peptidyl arginine deiminase, type II 	ENST00000444885.2|PADI2|ENSG00000117115.8|peptidyl arginine deiminase, type II
hg19_v2_chr12_+_103351444_103351464	0.0103558	AGCUGCC	ENST00000266744.3|ASCL1|ENSG00000139352.3|achaete-scute family bHLH transcription factor 1
hg19_v2_chr2_+_44066101_44066124	0.00949108	AGCUGCC	ENST00000272286.2|ABCG8|ENSG00000143921.6|ATP-binding cassette, sub-family G (WHITE), member 8
hg19_v2_chr17_-_617949_618107	0.00914512	AGCUGCC	ENST00000401468.3|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000574029.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000291074.5|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000571805.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000437048.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000446250.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae)
hg19_v2_chr5_-_136834982_136835037	0.00907171	AGCUGCC	ENST00000510689.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 	ENST00000394945.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v2_chr19_+_19303008_19303083	0.00696969	AGCUGCC	ENST00000353145.1|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000421262.3|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000303088.4|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000456252.3|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein 	ENST00000593273.1|RFXANK|ENSG00000064490.9|regulatory factor X-associated ankyrin-containing protein
hg19_v2_chr17_-_61850894_61851135	0.00653609	AGCUGCC	ENST00000403162.3|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000582252.1|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47 	ENST00000225726.5|CCDC47|ENSG00000108588.9|coiled-coil domain containing 47
hg19_v2_chr13_-_28545276_28545276	0.00610756	AGCUGCC	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr15_+_68570062_68570147	0.00602685	AGCUGCC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr7_-_79082867_79082900	0.00569483	AGCUGCC	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr15_-_50978965_50979012	0.00504616	AGCUGCC	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr19_+_49468558_49468567	0.00477247	AGCUGCC	ENST00000331825.6|FTL|ENSG00000087086.9|ferritin, light polypeptide
hg19_v2_chr16_+_1756162_1756241	0.00428749	AGCUGCC	ENST00000250894.4|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3 	ENST00000356010.5|MAPK8IP3|ENSG00000138834.8|mitogen-activated protein kinase 8 interacting protein 3
hg19_v2_chr22_+_41777927_41777971	0.00408667	AGCUGCC	ENST00000266304.4|TEF|ENSG00000167074.10|thyrotrophic embryonic factor
hg19_v2_chr22_-_30901637_30901705	0.00371408	AGCUGCC	ENST00000381982.3|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000255858.7|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000540456.1|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae) 	ENST00000392772.2|SEC14L4|ENSG00000133488.10|SEC14-like 4 (S. cerevisiae)
hg19_v2_chr20_-_43438912_43439165	0.00267614	AGCUGCC	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr1_-_39347255_39347303	0.00213218	AGCUGCC	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr2_+_24714729_24714927	0.00198498	AGCUGCC	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr9_-_101471479_101471522	0.00190654	AGCUGCC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr1_+_202091980_202091991	0.000893582	AGCUGCC	ENST00000367282.5|GPR37L1|ENSG00000170075.8|G protein-coupled receptor 37 like 1
hg19_v2_chrX_-_153363188_153363212	0.000533537	AGCUGCC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chrX_+_24483338_24483573	0.000229395	AGCUGCC	ENST00000379162.4|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3 	ENST00000441463.2|PDK3|ENSG00000067992.8|pyruvate dehydrogenase kinase, isozyme 3
