hg19_v2_chr13_-_72441315_72441454	0.552213	AUAAAGU	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr12_+_27396901_27397108	0.361418	AUAAAGU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr1_+_164528866_164528877	0.348067	AUAAAGU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr1_+_76540386_76540445	0.28352	AUAAAGU	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr12_-_96794143_96794264	0.272316	AUAAAGU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr2_-_160654745_160654764	0.265025	AUAAAGU	ENST00000259053.4|CD302|ENSG00000241399.2|CD302 molecule 	ENST00000429078.2|CD302|ENSG00000241399.2|CD302 molecule
hg19_v2_chr12_-_88974236_88974256	0.265017	AUAAAGU	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr20_+_42544782_42544828	0.260832	AUAAAGU	ENST00000423191.2|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2 	ENST00000372999.1|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2
hg19_v2_chr21_-_28217721_28217735	0.254527	AUAAAGU	ENST00000284984.3|ADAMTS1|ENSG00000154734.10|ADAM metallopeptidase with thrombospondin type 1 motif, 1
hg19_v2_chr4_-_16900217_16900230	0.251715	AUAAAGU	ENST00000441778.2|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr10_+_28966271_28966437	0.250456	AUAAAGU	ENST00000375533.3|BAMBI|ENSG00000095739.7|BMP and activin membrane-bound inhibitor
hg19_v2_chr1_+_214161272_214161322	0.24391	AUAAAGU	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr4_+_55524085_55524110	0.232662	AUAAAGU	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr2_+_46524537_46524553	0.231708	AUAAAGU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr9_+_5450503_5450551	0.19903	AUAAAGU	ENST00000381573.4|CD274|ENSG00000120217.9|CD274 molecule 	ENST00000381577.3|CD274|ENSG00000120217.9|CD274 molecule
hg19_v2_chr2_+_203879568_203879611	0.187784	AUAAAGU	ENST00000449802.1|NBEAL1|ENSG00000144426.14|neurobeachin-like 1
hg19_v2_chr5_+_56111361_56111403	0.185239	AUAAAGU	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr11_-_73309228_73309257	0.181858	AUAAAGU	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr3_-_72496035_72496069	0.180459	AUAAAGU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr4_-_102268628_102268693	0.169711	AUAAAGU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr4_-_152147579_152147750	0.166593	AUAAAGU	ENST00000304527.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000455740.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000424281.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000409598.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr19_+_1752372_1752372	0.163399	AUAAAGU	ENST00000382349.4|ONECUT3|ENSG00000205922.4|one cut homeobox 3
hg19_v2_chr17_+_45973516_45973618	0.160559	AUAAAGU	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr2_+_148778570_148778589	0.159441	AUAAAGU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr1_+_61547894_61547980	0.159336	AUAAAGU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr20_-_4982132_4982164	0.157968	AUAAAGU	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr17_-_62207485_62207511	0.151078	AUAAAGU	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chrX_-_135849484_135849551	0.148952	AUAAAGU	ENST00000370620.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 	ENST00000535227.1|ARHGEF6|ENSG00000129675.11|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
hg19_v2_chr3_+_150126101_150126122	0.147864	AUAAAGU	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr22_+_38597889_38598021	0.147283	AUAAAGU	ENST00000338483.2|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000538320.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000538999.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 	ENST00000441709.1|MAFF|ENSG00000185022.7|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F
hg19_v2_chr1_-_173991434_173991556	0.146847	AUAAAGU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr3_+_110790590_110790603	0.141512	AUAAAGU	ENST00000485303.1|PVRL3|ENSG00000177707.6|poliovirus receptor-related 3
hg19_v2_chr6_-_44265411_44265445	0.140557	AUAAAGU	ENST00000371505.4|TCTE1|ENSG00000146221.8|t-complex-associated-testis-expressed 1
hg19_v2_chr3_+_14860469_14860469	0.139647	AUAAAGU	ENST00000285046.5|FGD5|ENSG00000154783.6|FYVE, RhoGEF and PH domain containing 5
hg19_v2_chr15_+_57210818_57210930	0.136777	AUAAAGU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr8_-_93115445_93115462	0.136441	AUAAAGU	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr2_+_16080659_16080686	0.136262	AUAAAGU	ENST00000281043.3|MYCN|ENSG00000134323.10|v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog
hg19_v2_chr5_-_43313574_43313614	0.13085	AUAAAGU	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr4_+_145567173_145567296	0.130043	AUAAAGU	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chrX_+_77166172_77166261	0.128231	AUAAAGU	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr5_-_90679145_90679176	0.12573	AUAAAGU	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr14_-_53619816_53620056	0.123881	AUAAAGU	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr4_+_141294628_141294821	0.123812	AUAAAGU	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chr15_+_77223960_77223994	0.123311	AUAAAGU	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr8_-_63998590_63998634	0.122471	AUAAAGU	ENST00000260116.4|TTPA|ENSG00000137561.4|tocopherol (alpha) transfer protein
hg19_v2_chr11_+_120207787_120207962	0.120324	AUAAAGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr19_+_34745442_34745502	0.120111	AUAAAGU	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr8_-_48651648_48651648	0.117045	AUAAAGU	ENST00000408965.3|CEBPD|ENSG00000221869.4|CCAAT/enhancer binding protein (C/EBP), delta
hg19_v2_chr3_+_15247686_15247784	0.115149	AUAAAGU	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chrX_-_33146477_33146521	0.112072	AUAAAGU	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr2_+_179059365_179059376	0.110513	AUAAAGU	ENST00000190611.4|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chr10_+_76586348_76586400	0.110076	AUAAAGU	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr10_-_131762105_131762105	0.10885	AUAAAGU	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr17_-_46623441_46623441	0.108439	AUAAAGU	ENST00000330070.4|HOXB2|ENSG00000173917.9|homeobox B2
hg19_v2_chr6_+_15246501_15246527	0.107153	AUAAAGU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr12_+_32655048_32655108	0.105979	AUAAAGU	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr2_+_109335929_109336002	0.104361	AUAAAGU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr5_-_132299313_132299334	0.103826	AUAAAGU	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr16_-_47177874_47177922	0.100186	AUAAAGU	ENST00000562435.1|NETO2|ENSG00000171208.5|neuropilin (NRP) and tolloid (TLL)-like 2
hg19_v2_chr5_+_10353780_10353890	0.0991316	AUAAAGU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr7_+_94139105_94139197	0.097811	AUAAAGU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr3_+_11314099_11314122	0.0975291	AUAAAGU	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr2_+_120517174_120517207	0.0965716	AUAAAGU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr6_-_16761678_16761721	0.0955499	AUAAAGU	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr1_+_116184566_116184633	0.0951023	AUAAAGU	ENST00000355485.2|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1 	ENST00000369510.4|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1
hg19_v2_chr8_-_22550815_22550844	0.0949956	AUAAAGU	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr1_+_87380299_87380475	0.0943001	AUAAAGU	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr14_-_91526922_91527001	0.0937013	AUAAAGU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr3_-_171178157_171178225	0.0933008	AUAAAGU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr10_-_30348439_30348531	0.0927261	AUAAAGU	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr2_-_218808771_218808851	0.0926895	AUAAAGU	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr10_-_52383644_52383743	0.0923602	AUAAAGU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr19_+_8455077_8455083	0.0923299	AUAAAGU	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr19_+_47421933_47421933	0.0920819	AUAAAGU	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr7_-_27213893_27213954	0.0916831	AUAAAGU	ENST00000283921.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr4_+_78078304_78078406	0.0912793	AUAAAGU	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr3_+_43732362_43732408	0.0902631	AUAAAGU	ENST00000458276.2|ABHD5|ENSG00000011198.3|abhydrolase domain containing 5
hg19_v2_chr22_+_25465786_25465936	0.0898298	AUAAAGU	ENST00000401395.1|KIAA1671|ENSG00000197077.8|KIAA1671
hg19_v2_chr1_+_65886262_65886271	0.0895133	AUAAAGU	ENST00000371065.4|LEPROT|ENSG00000213625.4|leptin receptor overlapping transcript
hg19_v2_chr4_-_25864581_25864621	0.0891298	AUAAAGU	ENST00000399878.3|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
hg19_v2_chr12_+_132379160_132379201	0.0879086	AUAAAGU	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr12_-_71031220_71031229	0.0875085	AUAAAGU	ENST00000334414.6|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chrX_-_39956656_39956751	0.0872107	AUAAAGU	ENST00000397354.3|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378444.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr15_-_77363513_77363570	0.0866925	AUAAAGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr2_+_10183651_10183713	0.0863395	AUAAAGU	ENST00000305883.1|KLF11|ENSG00000172059.6|Kruppel-like factor 11
hg19_v2_chr10_+_8096631_8096660	0.0850954	AUAAAGU	ENST00000379328.3|GATA3|ENSG00000107485.11|GATA binding protein 3
hg19_v2_chr12_-_117628333_117628339	0.083343	AUAAAGU	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chr11_-_108093329_108093375	0.0829359	AUAAAGU	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr2_-_19558373_19558414	0.082392	AUAAAGU	ENST00000272223.2|OSR1|ENSG00000143867.5|odd-skipped related transciption factor 1
hg19_v2_chr12_-_76425368_76425384	0.0823352	AUAAAGU	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr2_+_181845298_181845378	0.0810919	AUAAAGU	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr10_-_14590644_14590669	0.080655	AUAAAGU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr5_-_100238956_100238994	0.0788421	AUAAAGU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr10_-_65225722_65225755	0.0782249	AUAAAGU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr2_-_39664405_39664453	0.0778522	AUAAAGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr2_-_220110187_220110200	0.0775055	AUAAAGU	ENST00000295759.7|GLB1L|ENSG00000163521.11|galactosidase, beta 1-like 	ENST00000392089.2|GLB1L|ENSG00000163521.11|galactosidase, beta 1-like
hg19_v2_chr6_+_138188551_138188719	0.0774816	AUAAAGU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr6_-_117923520_117923529	0.0772653	AUAAAGU	ENST00000368498.2|GOPC|ENSG00000047932.9|golgi-associated PDZ and coiled-coil motif containing
hg19_v2_chr18_-_72921303_72921339	0.0756602	AUAAAGU	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr20_+_6748311_6748352	0.0755647	AUAAAGU	ENST00000378827.4|BMP2|ENSG00000125845.6|bone morphogenetic protein 2
hg19_v2_chr8_-_82754427_82754539	0.0739085	AUAAAGU	ENST00000353788.4|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000520618.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000518183.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000396330.2|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000519119.1|SNX16|ENSG00000104497.9|sorting nexin 16 	ENST00000345957.4|SNX16|ENSG00000104497.9|sorting nexin 16
hg19_v2_chr4_-_13629269_13629372	0.0735844	AUAAAGU	ENST00000040738.5|BOD1L1|ENSG00000038219.8|biorientation of chromosomes in cell division 1-like 1
hg19_v2_chr17_+_57784826_57784883	0.0735291	AUAAAGU	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr17_-_62502639_62502849	0.0734248	AUAAAGU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr4_-_141677267_141677291	0.0728265	AUAAAGU	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr10_-_97321112_97321163	0.0716276	AUAAAGU	ENST00000607232.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371227.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371249.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371247.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371246.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000393949.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000353505.5|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000347291.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chrX_-_119694538_119694555	0.0714097	AUAAAGU	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr3_+_179065474_179065530	0.0709555	AUAAAGU	ENST00000471841.1|MFN1|ENSG00000171109.14|mitofusin 1 	ENST00000280653.7|MFN1|ENSG00000171109.14|mitofusin 1
hg19_v2_chr6_+_157099036_157099086	0.0690708	AUAAAGU	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr1_-_109940550_109940573	0.0686751	AUAAAGU	ENST00000256637.6|SORT1|ENSG00000134243.7|sortilin 1
hg19_v2_chr5_-_107006596_107006651	0.0682854	AUAAAGU	ENST00000333274.6|EFNA5|ENSG00000184349.8|ephrin-A5
hg19_v2_chrX_-_41782249_41782287	0.0682049	AUAAAGU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr1_-_231175964_231176016	0.0668047	AUAAAGU	ENST00000366654.4|FAM89A|ENSG00000182118.5|family with sequence similarity 89, member A
hg19_v2_chr18_+_2655692_2655737	0.0637813	AUAAAGU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr3_-_52713729_52713784	0.0624546	AUAAAGU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr15_-_44486632_44486664	0.0614335	AUAAAGU	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr17_+_61086917_61086921	0.0610523	AUAAAGU	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr16_+_69221028_69221092	0.0607358	AUAAAGU	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr15_-_35088340_35088340	0.0598166	AUAAAGU	ENST00000290378.4|ACTC1|ENSG00000159251.6|actin, alpha, cardiac muscle 1
hg19_v2_chr1_-_150552006_150552093	0.0576928	AUAAAGU	ENST00000307940.3|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related) 	ENST00000369026.2|MCL1|ENSG00000143384.8|myeloid cell leukemia sequence 1 (BCL2-related)
hg19_v2_chr18_+_20513782_20513859	0.0567673	AUAAAGU	ENST00000399722.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399725.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399721.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000583594.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr18_-_53255766_53255860	0.0557358	AUAAAGU	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_+_101702417_101702481	0.0550026	AUAAAGU	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr10_+_78078088_78078092	0.0547226	AUAAAGU	ENST00000496424.2|C10orf11|ENSG00000148655.10|chromosome 10 open reading frame 11
hg19_v2_chr8_-_130951940_130952118	0.0538072	AUAAAGU	ENST00000522250.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522941.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522746.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520204.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519070.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520254.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519824.2|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519540.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B
hg19_v2_chr3_+_16216137_16216203	0.0533307	AUAAAGU	ENST00000339732.5|GALNT15|ENSG00000131386.13|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
hg19_v2_chr8_-_53626974_53627032	0.0526583	AUAAAGU	ENST00000435644.2|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000518710.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000025008.5|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000517963.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1
hg19_v2_chr1_-_156051789_156051838	0.052132	AUAAAGU	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr6_+_17281573_17281605	0.0521	AUAAAGU	ENST00000379052.5|RBM24|ENSG00000112183.10|RNA binding motif protein 24
hg19_v2_chr12_-_42632016_42632089	0.0518888	AUAAAGU	ENST00000442791.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000327791.4|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000534854.2|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380788.3|YAF2|ENSG00000015153.10|YY1 associated factor 2 	ENST00000380790.4|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr9_-_126030817_126030906	0.0518157	AUAAAGU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr5_-_693500_693511	0.0517629	AUAAAGU	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr4_+_156680153_156680242	0.0517182	AUAAAGU	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr2_-_183903133_183903210	0.0516234	AUAAAGU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr10_+_27444268_27444301	0.0512517	AUAAAGU	ENST00000375940.4|MASTL|ENSG00000120539.10|microtubule associated serine/threonine kinase-like 	ENST00000342386.6|MASTL|ENSG00000120539.10|microtubule associated serine/threonine kinase-like
hg19_v2_chr1_+_100503643_100503677	0.0512016	AUAAAGU	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr8_+_64081118_64081131	0.0502708	AUAAAGU	ENST00000539294.1|YTHDF3|ENSG00000185728.12|YTH domain family, member 3
hg19_v2_chr14_-_96830207_96830207	0.0500293	AUAAAGU	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr2_+_48010221_48010307	0.0493989	AUAAAGU	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr20_+_4666882_4666996	0.0493819	AUAAAGU	ENST00000379440.4|PRNP|ENSG00000171867.12|prion protein 	ENST00000430350.2|PRNP|ENSG00000171867.12|prion protein
hg19_v2_chr11_+_93517393_93517465	0.0490474	AUAAAGU	ENST00000251871.3|MED17|ENSG00000042429.6|mediator complex subunit 17 	ENST00000530819.1|MED17|ENSG00000042429.6|mediator complex subunit 17
hg19_v2_chr1_+_112162381_112162431	0.0484951	AUAAAGU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr8_-_92053212_92053292	0.0484024	AUAAAGU	ENST00000285419.3|TMEM55A|ENSG00000155099.3|transmembrane protein 55A
hg19_v2_chr16_-_11350036_11350067	0.0477342	AUAAAGU	ENST00000332029.2|SOCS1|ENSG00000185338.4|suppressor of cytokine signaling 1
hg19_v2_chr7_-_143059845_143059866	0.0470981	AUAAAGU	ENST00000443739.2|FAM131B|ENSG00000159784.13|family with sequence similarity 131, member B
hg19_v2_chr3_-_151176497_151176497	0.047029	AUAAAGU	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr7_+_26240776_26240807	0.0467315	AUAAAGU	ENST00000337620.4|CBX3|ENSG00000122565.14|chromobox homolog 3
hg19_v2_chr6_-_111804393_111804436	0.0467159	AUAAAGU	ENST00000368802.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000368805.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr2_+_29204161_29204178	0.0463906	AUAAAGU	ENST00000379558.4|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A 	ENST00000403861.2|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A
hg19_v2_chr3_+_187930719_187930729	0.0448202	AUAAAGU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr5_+_32585605_32585706	0.0447147	AUAAAGU	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr10_+_97515409_97515442	0.0441345	AUAAAGU	ENST00000371207.3|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1 	ENST00000543964.1|ENTPD1|ENSG00000138185.12|ectonucleoside triphosphate diphosphohydrolase 1
hg19_v2_chr7_+_17338239_17338262	0.0434975	AUAAAGU	ENST00000242057.4|AHR|ENSG00000106546.8|aryl hydrocarbon receptor
hg19_v2_chr2_+_170683942_170683972	0.0422199	AUAAAGU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr4_+_147096837_147096912	0.0411546	AUAAAGU	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr17_-_40976266_40976315	0.0411283	AUAAAGU	ENST00000593205.1|BECN1|ENSG00000126581.8|beclin 1, autophagy related 	ENST00000361523.4|BECN1|ENSG00000126581.8|beclin 1, autophagy related 	ENST00000590099.1|BECN1|ENSG00000126581.8|beclin 1, autophagy related 	ENST00000438274.3|BECN1|ENSG00000126581.8|beclin 1, autophagy related
hg19_v2_chr1_-_53018654_53018777	0.0409419	AUAAAGU	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chrX_-_134049262_134049297	0.0407063	AUAAAGU	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chrX_-_109561294_109561467	0.0406263	AUAAAGU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr9_-_111882195_111882255	0.0403836	AUAAAGU	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr13_-_30424821_30424847	0.0402917	AUAAAGU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr13_+_27131887_27131899	0.0400122	AUAAAGU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr1_-_67896095_67896106	0.0399618	AUAAAGU	ENST00000370994.4|SERBP1|ENSG00000142864.10|SERPINE1 mRNA binding protein 1
hg19_v2_chr1_+_16174280_16174365	0.0397599	AUAAAGU	ENST00000375759.3|SPEN|ENSG00000065526.6|spen family transcriptional repressor
hg19_v2_chr16_+_69599861_69599887	0.0395698	AUAAAGU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_-_47184723_47184736	0.0395333	AUAAAGU	ENST00000371933.3|EFCAB14|ENSG00000159658.6|EF-hand calcium binding domain 14
hg19_v2_chr3_-_183735731_183735803	0.0391421	AUAAAGU	ENST00000334444.6|ABCC5|ENSG00000114770.12|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
hg19_v2_chr7_-_71801980_71802013	0.0387014	AUAAAGU	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr6_-_24721054_24721074	0.0384632	AUAAAGU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr3_+_178866199_178866311	0.0382645	AUAAAGU	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr16_+_84733575_84733646	0.0377639	AUAAAGU	ENST00000219473.7|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000563892.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000562283.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000570191.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000569038.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000570053.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10
hg19_v2_chrX_-_80457385_80457441	0.0374851	AUAAAGU	ENST00000451455.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000436386.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000358130.2|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5
hg19_v2_chr21_+_35445827_35445886	0.0373285	AUAAAGU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr14_-_77495007_77495093	0.0372223	AUAAAGU	ENST00000238647.3|IRF2BPL|ENSG00000119669.3|interferon regulatory factor 2 binding protein-like
hg19_v2_chr6_+_50786414_50786439	0.0370276	AUAAAGU	ENST00000344788.3|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 	ENST00000393655.3|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 	ENST00000263046.4|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg19_v2_chr13_+_33160553_33160564	0.0363102	AUAAAGU	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr1_+_203595903_203595934	0.0362575	AUAAAGU	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr17_-_58603568_58603610	0.035582	AUAAAGU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr14_+_90863327_90863356	0.0355331	AUAAAGU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr10_+_89622870_89622870	0.0353762	AUAAAGU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr1_+_33005020_33005077	0.0351358	AUAAAGU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr20_-_36156125_36156250	0.0349967	AUAAAGU	ENST00000397135.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein 	ENST00000397137.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr8_+_91803695_91803778	0.0347769	AUAAAGU	ENST00000417640.2|NECAB1|ENSG00000123119.7|N-terminal EF-hand calcium binding protein 1
hg19_v2_chr3_-_71774516_71774587	0.0347291	AUAAAGU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr2_-_96811170_96811186	0.0347194	AUAAAGU	ENST00000288943.4|DUSP2|ENSG00000158050.4|dual specificity phosphatase 2
hg19_v2_chr9_-_91793675_91793698	0.034317	AUAAAGU	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chr8_+_94712732_94712739	0.0338139	AUAAAGU	ENST00000518322.1|FAM92A1|ENSG00000188343.8|family with sequence similarity 92, member A1
hg19_v2_chr22_-_46933067_46933067	0.0337663	AUAAAGU	ENST00000262738.3|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1 	ENST00000395964.1|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1
hg19_v2_chr6_+_43139037_43139094	0.0335824	AUAAAGU	ENST00000265354.4|SRF|ENSG00000112658.6|serum response factor (c-fos serum response element-binding transcription factor)
hg19_v2_chr3_+_107241783_107241850	0.0334873	AUAAAGU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr9_-_132586378_132586433	0.0321754	AUAAAGU	ENST00000351698.4|TOR1A|ENSG00000136827.11|torsin family 1, member A (torsin A)
hg19_v2_chr3_-_47205457_47205492	0.0319976	AUAAAGU	ENST00000409792.3|SETD2|ENSG00000181555.15|SET domain containing 2
hg19_v2_chr1_+_113933581_113933611	0.0316439	AUAAAGU	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr22_-_50217981_50217981	0.0315803	AUAAAGU	ENST00000457780.2|BRD1|ENSG00000100425.14|bromodomain containing 1
hg19_v2_chr5_+_96271141_96271168	0.0314361	AUAAAGU	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr13_+_46039037_46039126	0.0313854	AUAAAGU	ENST00000349995.5|COG3|ENSG00000136152.10|component of oligomeric golgi complex 3
hg19_v2_chr3_+_57261743_57261824	0.0312616	AUAAAGU	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chrX_-_20284958_20285039	0.0302438	AUAAAGU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr10_+_105726862_105726986	0.0302341	AUAAAGU	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr6_-_79787902_79787958	0.0298984	AUAAAGU	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr3_-_128879875_128879937	0.0298346	AUAAAGU	ENST00000418265.1|ISY1-RAB43|ENSG00000261796.1|ISY1-RAB43 readthrough 	ENST00000393292.3|ISY1|ENSG00000240682.5|ISY1 splicing factor homolog (S. cerevisiae) 	ENST00000273541.8|ISY1|ENSG00000240682.5|ISY1 splicing factor homolog (S. cerevisiae)
hg19_v2_chr11_-_33795893_33796089	0.0297128	AUAAAGU	ENST00000526785.1|FBXO3|ENSG00000110429.9|F-box protein 3 	ENST00000534136.1|FBXO3|ENSG00000110429.9|F-box protein 3 	ENST00000265651.3|FBXO3|ENSG00000110429.9|F-box protein 3 	ENST00000530401.1|FBXO3|ENSG00000110429.9|F-box protein 3 	ENST00000448981.2|FBXO3|ENSG00000110429.9|F-box protein 3
hg19_v2_chr7_-_94285511_94285522	0.0295766	AUAAAGU	ENST00000265735.7|SGCE|ENSG00000127990.11|sarcoglycan, epsilon
hg19_v2_chrX_+_120181457_120181474	0.0294582	AUAAAGU	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr7_-_23510086_23510118	0.0294134	AUAAAGU	ENST00000258729.3|IGF2BP3|ENSG00000136231.9|insulin-like growth factor 2 mRNA binding protein 3
hg19_v2_chr11_-_46940074_46940193	0.0287555	AUAAAGU	ENST00000378623.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4 	ENST00000534404.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4
hg19_v2_chr9_-_16870704_16870841	0.0282581	AUAAAGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr11_+_111473108_111473226	0.0282337	AUAAAGU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr10_-_62704005_62704045	0.0281684	AUAAAGU	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr7_+_24612935_24612980	0.0280119	AUAAAGU	ENST00000222644.5|MPP6|ENSG00000105926.11|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
hg19_v2_chr16_+_53088885_53088961	0.0279331	AUAAAGU	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr1_+_212208919_212209147	0.0272725	AUAAAGU	ENST00000366991.4|DTL|ENSG00000143476.13|denticleless E3 ubiquitin protein ligase homolog (Drosophila) 	ENST00000542077.1|DTL|ENSG00000143476.13|denticleless E3 ubiquitin protein ligase homolog (Drosophila)
hg19_v2_chr7_-_91875358_91875480	0.0272018	AUAAAGU	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr3_+_14444063_14444133	0.0270675	AUAAAGU	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr5_+_173472607_173472732	0.0265966	AUAAAGU	ENST00000303177.3|NSG2|ENSG00000170091.6|Neuron-specific protein family member 2  	ENST00000519867.1|NSG2|ENSG00000170091.6|Neuron-specific protein family member 2
hg19_v2_chrX_+_24167746_24167811	0.0253723	AUAAAGU	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr9_+_82186872_82186898	0.0253553	AUAAAGU	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr4_+_79697495_79697538	0.025222	AUAAAGU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr6_+_149887377_149887430	0.0246744	AUAAAGU	ENST00000367419.5|GINM1|ENSG00000055211.8|glycoprotein integral membrane 1
hg19_v2_chr10_-_64576105_64576133	0.02424	AUAAAGU	ENST00000242480.3|EGR2|ENSG00000122877.9|early growth response 2 	ENST00000411732.1|EGR2|ENSG00000122877.9|early growth response 2
hg19_v2_chr1_+_114472222_114472377	0.0241569	AUAAAGU	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr5_+_102455853_102455961	0.0241075	AUAAAGU	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr1_+_42846443_42846502	0.0240968	AUAAAGU	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr18_-_45456930_45456970	0.0230987	AUAAAGU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr12_-_75905374_75905420	0.0229954	AUAAAGU	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr20_-_33680588_33680618	0.0219938	AUAAAGU	ENST00000451813.2|TRPC4AP|ENSG00000100991.7|transient receptor potential cation channel, subfamily C, member 4 associated protein 	ENST00000432634.2|TRPC4AP|ENSG00000100991.7|transient receptor potential cation channel, subfamily C, member 4 associated protein
hg19_v2_chr3_-_197282821_197282919	0.0219287	AUAAAGU	ENST00000445160.2|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000446746.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000432819.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000392379.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000441275.1|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1 	ENST00000392378.2|BDH1|ENSG00000161267.7|3-hydroxybutyrate dehydrogenase, type 1
hg19_v2_chr13_+_42846272_42846334	0.0218271	AUAAAGU	ENST00000025301.2|AKAP11|ENSG00000023516.7|A kinase (PRKA) anchor protein 11
hg19_v2_chr3_+_158991025_158991083	0.0216934	AUAAAGU	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr14_+_53196872_53196959	0.0213984	AUAAAGU	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr2_+_134877740_134877762	0.0209333	AUAAAGU	ENST00000409645.1|MGAT5|ENSG00000152127.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase
hg19_v2_chr3_+_30648066_30648167	0.020405	AUAAAGU	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr17_-_73179046_73179078	0.020025	AUAAAGU	ENST00000314523.7|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2 	ENST00000420826.2|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2
hg19_v2_chr4_+_183164574_183164586	0.0200054	AUAAAGU	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr7_+_102715315_102715380	0.0199998	AUAAAGU	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr2_+_201676256_201676323	0.0199369	AUAAAGU	ENST00000452206.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000410110.2|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1 	ENST00000409600.1|BZW1|ENSG00000082153.13|basic leucine zipper and W2 domains 1
hg19_v2_chr2_-_54087066_54087297	0.0199362	AUAAAGU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr19_+_17858509_17858529	0.0198908	AUAAAGU	ENST00000594202.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000252771.7|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000389133.4|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr18_-_18691739_18691812	0.0198105	AUAAAGU	ENST00000399799.2|ROCK1|ENSG00000067900.6|Rho-associated, coiled-coil containing protein kinase 1
hg19_v2_chr17_+_54671047_54671075	0.0195383	AUAAAGU	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr5_+_172483347_172483407	0.0192968	AUAAAGU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr3_+_159557637_159557650	0.0191583	AUAAAGU	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr6_-_105585022_105585112	0.0191012	AUAAAGU	ENST00000314641.5|BVES|ENSG00000112276.9|blood vessel epicardial substance
hg19_v2_chrX_-_128788914_128788942	0.0188646	AUAAAGU	ENST00000429967.1|APLN|ENSG00000171388.9|apelin 	ENST00000307484.6|APLN|ENSG00000171388.9|apelin
hg19_v2_chr17_+_67410832_67410871	0.0188437	AUAAAGU	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr1_+_200708671_200708744	0.0187768	AUAAAGU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr1_+_50574585_50574638	0.0184694	AUAAAGU	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr2_-_11484710_11484812	0.0180487	AUAAAGU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr17_+_57642886_57643006	0.0180205	AUAAAGU	ENST00000251241.4|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000451169.2|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000425628.3|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000584385.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40 	ENST00000580030.1|DHX40|ENSG00000108406.5|DEAH (Asp-Glu-Ala-His) box polypeptide 40
hg19_v2_chr2_+_135676381_135676435	0.0177068	AUAAAGU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr12_+_65672423_65672553	0.0176222	AUAAAGU	ENST00000355192.3|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000308259.5|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000540804.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000535664.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3 	ENST00000541189.1|MSRB3|ENSG00000174099.6|methionine sulfoxide reductase B3
hg19_v2_chr3_+_31574189_31574282	0.0173361	AUAAAGU	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr8_-_105601134_105601252	0.0172665	AUAAAGU	ENST00000276654.5|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12 	ENST00000424843.2|LRP12|ENSG00000147650.7|low density lipoprotein receptor-related protein 12
hg19_v2_chrX_+_14891522_14891593	0.0168073	AUAAAGU	ENST00000380492.3|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2 	ENST00000482354.1|MOSPD2|ENSG00000130150.7|motile sperm domain containing 2
hg19_v2_chr5_-_56247935_56247959	0.0164829	AUAAAGU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr1_-_57889687_57889754	0.0156081	AUAAAGU	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr6_+_4021554_4021656	0.0155118	AUAAAGU	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr9_+_77703414_77703479	0.0149731	AUAAAGU	ENST00000346234.6|OSTF1|ENSG00000134996.11|osteoclast stimulating factor 1
hg19_v2_chr4_-_74124502_74124523	0.0146476	AUAAAGU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr5_-_81046922_81047072	0.0145141	AUAAAGU	ENST00000514493.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000320672.4|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr15_+_44719394_44719579	0.0144192	AUAAAGU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr14_-_57735528_57735726	0.0144146	AUAAAGU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr14_+_104182061_104182072	0.0143584	AUAAAGU	ENST00000216602.6|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr12_-_49449107_49449107	0.014288	AUAAAGU	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr16_+_68119440_68119561	0.0142352	AUAAAGU	ENST00000346183.3|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000329524.4|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr4_-_85418103_85418103	0.0139739	AUAAAGU	ENST00000515820.2|NKX6-1|ENSG00000163623.5|NK6 homeobox 1
hg19_v2_chr1_-_208417620_208417680	0.0137799	AUAAAGU	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr11_+_64851666_64851728	0.0137124	AUAAAGU	ENST00000525509.1|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1 	ENST00000294258.3|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1 	ENST00000526334.1|ZFPL1|ENSG00000162300.7|zinc finger protein-like 1
hg19_v2_chr7_+_156931606_156931674	0.0135675	AUAAAGU	ENST00000348165.5|UBE3C|ENSG00000009335.13|ubiquitin protein ligase E3C
hg19_v2_chrX_+_16964794_16964861	0.0131925	AUAAAGU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr5_+_76114758_76114838	0.012817	AUAAAGU	ENST00000514165.1|F2RL1|ENSG00000164251.4|coagulation factor II (thrombin) receptor-like 1 	ENST00000296677.4|F2RL1|ENSG00000164251.4|coagulation factor II (thrombin) receptor-like 1
hg19_v2_chr19_+_8483272_8483300	0.0127098	AUAAAGU	ENST00000602117.1|MARCH2|ENSG00000099785.6|membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
hg19_v2_chr15_+_34517194_34517246	0.0126697	AUAAAGU	ENST00000267750.4|EMC4|ENSG00000128463.8|ER membrane protein complex subunit 4 	ENST00000249209.4|EMC4|ENSG00000128463.8|ER membrane protein complex subunit 4 	ENST00000561372.1|EMC4|ENSG00000128463.8|ER membrane protein complex subunit 4 	ENST00000559078.1|EMC4|ENSG00000128463.8|ER membrane protein complex subunit 4 	ENST00000557879.1|EMC4|ENSG00000128463.8|ER membrane protein complex subunit 4
hg19_v2_chr1_+_20208870_20209006	0.0125975	AUAAAGU	ENST00000375120.3|OTUD3|ENSG00000169914.5|OTU domain containing 3
hg19_v2_chr2_+_187558698_187558795	0.0125766	AUAAAGU	ENST00000304698.5|FAM171B|ENSG00000144369.8|family with sequence similarity 171, member B
hg19_v2_chr3_-_197025447_197025533	0.0125148	AUAAAGU	ENST00000346964.2|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000357674.4|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000314062.3|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000448528.2|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000419553.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chrX_+_103411189_103411301	0.0124768	AUAAAGU	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr1_-_19283163_19283180	0.0124401	AUAAAGU	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr15_-_61521495_61521518	0.0122364	AUAAAGU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr1_+_64239657_64239724	0.0120526	AUAAAGU	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr9_-_136242909_136242953	0.0119175	AUAAAGU	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr2_+_54683419_54683442	0.0115448	AUAAAGU	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr17_-_48072574_48072597	0.0113942	AUAAAGU	ENST00000434704.2|DLX3|ENSG00000064195.7|distal-less homeobox 3
hg19_v2_chr12_+_69633317_69633366	0.011375	AUAAAGU	ENST00000435070.2|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr8_+_30013813_30013872	0.0111995	AUAAAGU	ENST00000221114.3|DCTN6|ENSG00000104671.3|dynactin 6
hg19_v2_chr15_+_52311398_52311461	0.0110138	AUAAAGU	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr9_+_125703282_125703337	0.0109675	AUAAAGU	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr17_-_13505219_13505299	0.0109017	AUAAAGU	ENST00000284110.1|HS3ST3A1|ENSG00000153976.2|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1
hg19_v2_chr5_-_131132614_131132648	0.0107835	AUAAAGU	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr15_-_52861394_52861436	0.0105127	AUAAAGU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr18_+_3247413_3247533	0.0104492	AUAAAGU	ENST00000579226.1|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric 	ENST00000217652.3|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric
hg19_v2_chrX_+_16737718_16737778	0.010374	AUAAAGU	ENST00000380155.3|SYAP1|ENSG00000169895.5|synapse associated protein 1
hg19_v2_chr2_+_95691417_95691429	0.0102241	AUAAAGU	ENST00000309988.4|MAL|ENSG00000172005.6|mal, T-cell differentiation protein
hg19_v2_chr20_-_62601218_62601291	0.0100182	AUAAAGU	ENST00000369888.1|ZNF512B|ENSG00000196700.3|zinc finger protein 512B
hg19_v2_chr20_+_46130601_46130613	0.00987872	AUAAAGU	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr3_-_136471204_136471249	0.0097921	AUAAAGU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr20_+_56884752_56884799	0.00969145	AUAAAGU	ENST00000244040.3|RAB22A|ENSG00000124209.3|RAB22A, member RAS oncogene family
hg19_v2_chr1_-_224033596_224033697	0.00955054	AUAAAGU	ENST00000391878.2|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2 	ENST00000343537.7|TP53BP2|ENSG00000143514.12|tumor protein p53 binding protein, 2
hg19_v2_chr2_-_26101374_26101389	0.00952008	AUAAAGU	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr16_-_84178728_84178809	0.00895321	AUAAAGU	ENST00000562224.1|HSDL1|ENSG00000103160.7|hydroxysteroid dehydrogenase like 1 	ENST00000434463.3|HSDL1|ENSG00000103160.7|hydroxysteroid dehydrogenase like 1 	ENST00000564998.1|HSDL1|ENSG00000103160.7|hydroxysteroid dehydrogenase like 1 	ENST00000219439.4|HSDL1|ENSG00000103160.7|hydroxysteroid dehydrogenase like 1
hg19_v2_chr12_-_92539614_92539673	0.0087857	AUAAAGU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chrX_+_76709648_76709648	0.00872953	AUAAAGU	ENST00000439435.1|FGF16|ENSG00000196468.5|fibroblast growth factor 16
hg19_v2_chr7_+_116139424_116139444	0.00872161	AUAAAGU	ENST00000222693.4|CAV2|ENSG00000105971.10|caveolin 2
hg19_v2_chr1_+_161736072_161736093	0.0085787	AUAAAGU	ENST00000367942.3|ATF6|ENSG00000118217.5|activating transcription factor 6
hg19_v2_chr10_-_99052382_99052413	0.00850777	AUAAAGU	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr8_-_60031762_60031803	0.00850089	AUAAAGU	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chr8_+_87354945_87355012	0.00842707	AUAAAGU	ENST00000517970.1|WWP1|ENSG00000123124.9|WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr8_-_103668114_103668134	0.0081302	AUAAAGU	ENST00000285407.6|KLF10|ENSG00000155090.10|Kruppel-like factor 10
hg19_v2_chr2_-_197457335_197457421	0.00812416	AUAAAGU	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr5_-_134788086_134788121	0.00771319	AUAAAGU	ENST00000537858.1|TIFAB|ENSG00000255833.1|TRAF-interacting protein with forkhead-associated domain, family member B
hg19_v2_chr1_+_159141397_159141549	0.00760876	AUAAAGU	ENST00000368124.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000368125.4|CADM3|ENSG00000162706.8|cell adhesion molecule 3 	ENST00000416746.1|CADM3|ENSG00000162706.8|cell adhesion molecule 3
hg19_v2_chr1_+_101361626_101361698	0.00743293	AUAAAGU	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr3_-_53916202_53916229	0.00730767	AUAAAGU	ENST00000335754.3|ACTR8|ENSG00000113812.9|ARP8 actin-related protein 8 homolog (yeast)
hg19_v2_chr11_-_77532050_77532066	0.00723076	AUAAAGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr1_+_150980889_150980965	0.00713513	AUAAAGU	ENST00000450884.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000271620.3|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000271619.8|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000368937.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000431193.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase 	ENST00000368936.1|PRUNE|ENSG00000143363.11|prune exopolyphosphatase
hg19_v2_chr10_-_70287231_70287290	0.00706804	AUAAAGU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr10_+_3109695_3109749	0.00700565	AUAAAGU	ENST00000381125.4|PFKP|ENSG00000067057.12|phosphofructokinase, platelet
hg19_v2_chr15_+_66161871_66161893	0.00671451	AUAAAGU	ENST00000569896.1|RAB11A|ENSG00000103769.5|RAB11A, member RAS oncogene family
hg19_v2_chrX_-_14047996_14048042	0.0066021	AUAAAGU	ENST00000380523.4|GEMIN8|ENSG00000046647.9|gem (nuclear organelle) associated protein 8 	ENST00000398355.3|GEMIN8|ENSG00000046647.9|gem (nuclear organelle) associated protein 8
hg19_v2_chr11_-_17035943_17035990	0.00649225	AUAAAGU	ENST00000355661.3|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000532079.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000448080.2|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7 	ENST00000531066.1|PLEKHA7|ENSG00000166689.10|pleckstrin homology domain containing, family A member 7
hg19_v2_chr6_+_163835669_163835693	0.00643231	AUAAAGU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chrX_-_77150985_77151090	0.00640403	AUAAAGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr9_+_128509624_128509658	0.00535238	AUAAAGU	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr16_+_22217577_22217667	0.0052297	AUAAAGU	ENST00000263026.5|EEF2K|ENSG00000103319.7|eukaryotic elongation factor-2 kinase
hg19_v2_chr11_-_63439013_63439091	0.00519729	AUAAAGU	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr9_+_95087766_95087950	0.00512755	AUAAAGU	ENST00000375587.3|CENPP|ENSG00000188312.9|centromere protein P
hg19_v2_chr4_+_72204755_72204778	0.00504776	AUAAAGU	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr15_-_72410109_72410161	0.00482404	AUAAAGU	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr22_-_44708731_44708746	0.00480073	AUAAAGU	ENST00000381176.4|KIAA1644|ENSG00000138944.7|KIAA1644
hg19_v2_chr4_+_89513574_89513670	0.00479169	AUAAAGU	ENST00000402738.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000431413.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000422770.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3 	ENST00000407637.1|HERC3|ENSG00000138641.11|HECT and RLD domain containing E3 ubiquitin protein ligase 3
hg19_v2_chr19_-_10305752_10305811	0.00460906	AUAAAGU	ENST00000540357.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000359526.4|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000340748.4|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr1_-_10003372_10003465	0.00460394	AUAAAGU	ENST00000377223.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000541052.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing 	ENST00000377213.1|LZIC|ENSG00000162441.7|leucine zipper and CTNNBIP1 domain containing
hg19_v2_chr20_+_33814457_33814506	0.00448678	AUAAAGU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr15_+_63481668_63481812	0.00448275	AUAAAGU	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr8_-_23712312_23712328	0.0044324	AUAAAGU	ENST00000290271.2|STC1|ENSG00000159167.7|stanniocalcin 1
hg19_v2_chr10_+_7860460_7860497	0.00415916	AUAAAGU	ENST00000344293.5|TAF3|ENSG00000165632.7|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa
hg19_v2_chr17_-_36981556_36981734	0.00406656	AUAAAGU	ENST00000536127.1|CWC25|ENSG00000108296.7|CWC25 spliceosome-associated protein homolog (S. cerevisiae) 	ENST00000225428.5|CWC25|ENSG00000108296.7|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v2_chr4_-_184580353_184580378	0.00389637	AUAAAGU	ENST00000326397.5|RWDD4|ENSG00000182552.10|RWD domain containing 4
hg19_v2_chr22_+_38093005_38093067	0.00386754	AUAAAGU	ENST00000406386.3|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr12_-_95467356_95467479	0.0035303	AUAAAGU	ENST00000393101.3|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1 	ENST00000333003.5|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1
hg19_v2_chr18_+_29598335_29598428	0.00340062	AUAAAGU	ENST00000217740.3|RNF125|ENSG00000101695.4|ring finger protein 125, E3 ubiquitin protein ligase
hg19_v2_chr3_-_114790179_114790222	0.00322377	AUAAAGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr12_-_66524482_66524548	0.00304284	AUAAAGU	ENST00000446587.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia) 	ENST00000266604.2|LLPH|ENSG00000139233.2|LLP homolog, long-term synaptic facilitation (Aplysia)
hg19_v2_chr4_-_71705590_71705662	0.0030122	AUAAAGU	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr12_+_64798095_64798162	0.00284027	AUAAAGU	ENST00000332707.5|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr9_+_140772226_140772386	0.00267789	AUAAAGU	ENST00000277551.2|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371372.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000277549.5|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371363.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371357.1|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit 	ENST00000371355.4|CACNA1B|ENSG00000148408.8|calcium channel, voltage-dependent, N type, alpha 1B subunit
hg19_v2_chr10_+_75757863_75757897	0.00238732	AUAAAGU	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr1_-_38019878_38019905	0.00231582	AUAAAGU	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr10_+_124768482_124768542	0.00220246	AUAAAGU	ENST00000368869.4|ACADSB|ENSG00000196177.8|acyl-CoA dehydrogenase, short/branched chain 	ENST00000358776.4|ACADSB|ENSG00000196177.8|acyl-CoA dehydrogenase, short/branched chain
hg19_v2_chr12_+_103351444_103351464	0.00170507	AUAAAGU	ENST00000266744.3|ASCL1|ENSG00000139352.3|achaete-scute family bHLH transcription factor 1
hg19_v2_chr12_-_108955070_108955176	0.00164072	AUAAAGU	ENST00000228284.3|SART3|ENSG00000075856.7|squamous cell carcinoma antigen recognized by T cells 3 	ENST00000546611.1|SART3|ENSG00000075856.7|squamous cell carcinoma antigen recognized by T cells 3
hg19_v2_chr3_+_139654018_139654039	0.00151574	AUAAAGU	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr6_-_55443975_55444012	0.00143128	AUAAAGU	ENST00000308161.4|HMGCLL1|ENSG00000146151.8|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 	ENST00000398661.2|HMGCLL1|ENSG00000146151.8|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 	ENST00000274901.4|HMGCLL1|ENSG00000146151.8|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1
hg19_v2_chr6_-_90121938_90122025	0.00123921	AUAAAGU	ENST00000369415.4|RRAGD|ENSG00000025039.10|Ras-related GTP binding D
hg19_v2_chr15_-_45815005_45815032	0.00114102	AUAAAGU	ENST00000261867.4|SLC30A4|ENSG00000104154.5|solute carrier family 30 (zinc transporter), member 4
hg19_v2_chr14_+_64932210_64932226	0.000927086	AUAAAGU	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr6_-_117086873_117086906	0.000905667	AUAAAGU	ENST00000368557.4|FAM162B|ENSG00000183807.6|family with sequence similarity 162, member B
hg19_v2_chr14_-_92506371_92506418	0.000745508	AUAAAGU	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr1_-_245027833_245027855	0.000600654	AUAAAGU	ENST00000444376.2|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr12_+_53848505_53848532	0.000590289	AUAAAGU	ENST00000552819.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000455667.3|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr11_-_31839488_31839515	0.000444124	AUAAAGU	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr1_+_93544791_93544807	0.000250003	AUAAAGU	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr2_+_187454749_187454808	0.000231112	AUAAAGU	ENST00000261023.3|ITGAV|ENSG00000138448.7|integrin, alpha V 	ENST00000374907.3|ITGAV|ENSG00000138448.7|integrin, alpha V
hg19_v2_chr13_-_23949671_23949702	0.000205727	AUAAAGU	ENST00000402364.1|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr10_+_111967345_111967442	0.000198924	AUAAAGU	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr10_+_70091812_70091832	2.18446e-05	AUAAAGU	ENST00000265866.7|HNRNPH3|ENSG00000096746.13|heterogeneous nuclear ribonucleoprotein H3 (2H9)
