hg19_v2_chr9_-_123691047_123691188	0.102227	CACCUCC	ENST00000373887.3|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chr11_+_73087309_73087452	0.043111	CACCUCC	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr11_-_45687128_45687214	0.0312036	CACCUCC	ENST00000308064.2|CHST1|ENSG00000175264.3|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
hg19_v2_chr6_+_30539153_30539255	0.0213212	CACCUCC	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr11_-_65430251_65430399	0.0204283	CACCUCC	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr13_-_44735393_44735393	0.0188846	CACCUCC	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr8_+_11141925_11141937	0.0158988	CACCUCC	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr15_+_64680003_64680063	0.0149269	CACCUCC	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr8_+_61591337_61591393	0.01471	CACCUCC	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr22_-_39268308_39268319	0.0142988	CACCUCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr5_+_175792459_175792513	0.0141379	CACCUCC	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr2_-_25475120_25475180	0.0138475	CACCUCC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr2_-_153574480_153574552	0.013807	CACCUCC	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr7_-_20826504_20826526	0.0137654	CACCUCC	ENST00000418710.2|SP8|ENSG00000164651.12|Sp8 transcription factor 	ENST00000361443.4|SP8|ENSG00000164651.12|Sp8 transcription factor
hg19_v2_chr9_-_130829588_130829636	0.0129441	CACCUCC	ENST00000373078.4|NAIF1|ENSG00000171169.8|nuclear apoptosis inducing factor 1
hg19_v2_chr3_-_45017609_45017687	0.0125864	CACCUCC	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr14_+_23775971_23776000	0.0123631	CACCUCC	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr16_+_30935418_30935418	0.012293	CACCUCC	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr14_+_23776024_23776105	0.00966401	CACCUCC	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr14_+_23790655_23790680	0.0077898	CACCUCC	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr1_+_46972668_46972669	0.00676786	CACCUCC	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr8_+_56014949_56015048	0.0058162	CACCUCC	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr6_-_30524951_30524957	0.00455956	CACCUCC	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr17_+_55333876_55333939	0.00443564	CACCUCC	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr9_-_101471479_101471522	0.00417782	CACCUCC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr14_-_23755297_23755350	0.00396185	CACCUCC	ENST00000357460.5|HOMEZ|ENSG00000215271.6|homeobox and leucine zipper encoding
hg19_v2_chr15_+_90544532_90544624	0.00230797	CACCUCC	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr15_-_73661605_73661605	0.00215064	CACCUCC	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chrX_-_53449593_53449677	0.00166207	CACCUCC	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr2_-_169104651_169104651	0.0015666	CACCUCC	ENST00000355999.4|STK39|ENSG00000198648.6|serine threonine kinase 39
hg19_v2_chr22_-_44708731_44708746	0.000885194	CACCUCC	ENST00000381176.4|KIAA1644|ENSG00000138944.7|KIAA1644
hg19_v2_chr20_+_42875887_42875921	0.000447902	CACCUCC	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
