hg19_v2_chr1_-_205782304_205782332	1.46716	GLI2	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr12_+_113354341_113354422	1.06334	GLI2	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr17_+_41158742_41158822	0.953386	GLI2	ENST00000415816.2|IFI35|ENSG00000068079.3|interferon-induced protein 35 	ENST00000438323.2|IFI35|ENSG00000068079.3|interferon-induced protein 35
hg19_v2_chr1_-_47407097_47407107	0.768011	GLI2	ENST00000457840.2|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr5_+_131409476_131409492	0.737715	GLI2	ENST00000296871.2|CSF2|ENSG00000164400.4|colony stimulating factor 2 (granulocyte-macrophage)
hg19_v2_chr7_-_47579188_47579231	0.6698	GLI2	ENST00000398879.1|TNS3|ENSG00000136205.12|tensin 3 	ENST00000355730.3|TNS3|ENSG00000136205.12|tensin 3 	ENST00000442536.2|TNS3|ENSG00000136205.12|tensin 3 	ENST00000458317.2|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr19_+_44084696_44084790	0.663478	GLI2	ENST00000562255.1|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing 	ENST00000569031.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr19_-_7939319_7939358	0.656164	GLI2	ENST00000539422.1|CTD-3193O13.9|ENSG00000183248.7|Protein FLJ22184
hg19_v2_chr15_-_78526855_78526916	0.62841	GLI2	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr11_+_13690249_13690274	0.573817	GLI2	ENST00000532701.1|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr8_+_31497271_31497285	0.564917	GLI2	ENST00000520407.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr17_+_39388700_39388715	0.50512	GLI2	ENST00000411528.2|KRTAP9-3|ENSG00000204873.3|keratin associated protein 9-3
hg19_v2_chr11_-_19262486_19262512	0.489963	GLI2	ENST00000250024.4|E2F8|ENSG00000129173.8|E2F transcription factor 8
hg19_v2_chr3_-_107809816_107809885	0.478374	GLI2	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr15_+_59063478_59063561	0.469639	GLI2	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr17_+_77030267_77030391	0.450544	GLI2	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr20_+_23168759_23168765	0.435997	GLI2	ENST00000411595.1|RP4-737E23.2|ENSG00000230387.1|RP4-737E23.2
hg19_v2_chr16_+_88872176_88872176	0.420724	GLI2	ENST00000569140.1|CDT1|ENSG00000167513.4|chromatin licensing and DNA replication factor 1
hg19_v2_chr17_-_3819751_3819794	0.416299	GLI2	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chr14_-_52535712_52535753	0.414846	GLI2	ENST00000216286.5|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen) 	ENST00000541773.1|NID2|ENSG00000087303.12|nidogen 2 (osteonidogen)
hg19_v2_chr12_+_4671352_4671390	0.403854	GLI2	ENST00000542744.1|DYRK4|ENSG00000010219.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
hg19_v2_chr9_+_126118449_126118539	0.39594	GLI2	ENST00000359999.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila) 	ENST00000373631.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr20_-_55100981_55100981	0.387306	GLI2	ENST00000243913.4|GCNT7|ENSG00000124091.5|glucosaminyl (N-acetyl) transferase family member 7
hg19_v2_chr14_+_94393605_94393731	0.381398	GLI2	ENST00000556222.1|FAM181A|ENSG00000140067.6|family with sequence similarity 181, member A 	ENST00000554404.1|FAM181A|ENSG00000140067.6|family with sequence similarity 181, member A 	ENST00000557000.2|FAM181A|ENSG00000140067.6|family with sequence similarity 181, member A
hg19_v2_chr19_+_44085189_44085189	0.376525	GLI2	ENST00000562365.2|PINLYP|ENSG00000234465.6|phospholipase A2 inhibitor and LY6/PLAUR domain containing
hg19_v2_chr9_+_126131131_126131168	0.37127	GLI2	ENST00000373629.2|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr10_-_49701686_49701697	0.363542	GLI2	ENST00000417247.2|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr16_+_2880296_2880310	0.354305	GLI2	ENST00000571723.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr1_-_45308616_45308735	0.353497	GLI2	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr5_-_150460914_150460997	0.352549	GLI2	ENST00000389378.2|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr5_-_172036436_172036436	0.351536	GLI2	ENST00000601856.1|AC027309.1|ENSG00000268553.1|AC027309.1
hg19_v2_chr5_-_95297534_95297563	0.350936	GLI2	ENST00000513343.1|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2 	ENST00000431061.2|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr1_-_21948906_21949075	0.350863	GLI2	ENST00000374761.2|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000599760.1|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr16_+_2880254_2880278	0.345176	GLI2	ENST00000570670.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr14_+_71108460_71108508	0.344513	GLI2	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr5_-_58571935_58571951	0.343051	GLI2	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr16_-_11681023_11681145	0.339987	GLI2	ENST00000570904.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000574701.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr15_+_67430339_67430366	0.332801	GLI2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr2_-_100759037_100759058	0.329764	GLI2	ENST00000317233.4|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000423966.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000416492.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr7_-_23053693_23053715	0.322323	GLI2	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr7_-_151511911_151511962	0.320911	GLI2	ENST00000392801.2|PRKAG2|ENSG00000106617.9|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
hg19_v2_chr19_-_10464570_10464754	0.315403	GLI2	ENST00000529739.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr14_+_94577074_94577161	0.313887	GLI2	ENST00000444961.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000448882.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557098.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000554800.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000556544.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000298902.5|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555819.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557634.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555744.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27
hg19_v2_chr16_-_30022293_30022401	0.311724	GLI2	ENST00000565273.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000567332.2|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000350119.4|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chr2_+_11295624_11295735	0.299992	GLI2	ENST00000402361.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3 	ENST00000428481.1|PQLC3|ENSG00000162976.8|PQ loop repeat containing 3
hg19_v2_chr19_-_49015050_49015111	0.296953	GLI2	ENST00000600059.1|LMTK3|ENSG00000142235.4|lemur tyrosine kinase 3
hg19_v2_chr5_-_9546180_9546195	0.293458	GLI2	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr14_+_96342729_96342790	0.289706	GLI2	ENST00000504119.1|LINC00617|ENSG00000250366.2|long intergenic non-protein coding RNA 617
hg19_v2_chr2_+_241564655_241564668	0.288925	GLI2	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr7_-_23053719_23053767	0.288145	GLI2	ENST00000432176.2|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000440481.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr12_-_110883346_110883392	0.288136	GLI2	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr17_+_29248953_29248978	0.28712	GLI2	ENST00000581285.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr3_+_32993065_32993074	0.286597	GLI2	ENST00000330953.5|CCR4|ENSG00000183813.6|chemokine (C-C motif) receptor 4
hg19_v2_chr3_+_88108381_88108450	0.283965	GLI2	ENST00000473136.1|RP11-159G9.5|ENSG00000229729.3|Uncharacterized protein
hg19_v2_chr14_-_24615523_24615569	0.28384	GLI2	ENST00000559056.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr6_+_163148973_163149044	0.277118	GLI2	ENST00000366888.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr12_-_132690337_132690347	0.276496	GLI2	ENST00000541995.1|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9) 	ENST00000542942.1|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)
hg19_v2_chr12_+_77158021_77158045	0.275929	GLI2	ENST00000550876.1|ZDHHC17|ENSG00000186908.10|zinc finger, DHHC-type containing 17
hg19_v2_chr19_+_45445524_45445537	0.2756	GLI2	ENST00000591600.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV
hg19_v2_chr16_-_74700737_74700804	0.275131	GLI2	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr19_-_40791211_40791269	0.275101	GLI2	ENST00000579047.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr14_-_24615805_24615834	0.275008	GLI2	ENST00000560410.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr16_+_2521500_2521514	0.273002	GLI2	ENST00000293973.1|NTN3|ENSG00000162068.1|netrin 3
hg19_v2_chr3_+_42727011_42727034	0.272818	GLI2	ENST00000287777.4|KLHL40|ENSG00000157119.11|kelch-like family member 40
hg19_v2_chr16_+_89686991_89687015	0.269627	GLI2	ENST00000393092.3|DPEP1|ENSG00000015413.5|dipeptidase 1 (renal)
hg19_v2_chr19_-_11039188_11039204	0.267603	GLI2	ENST00000588347.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr8_+_1922024_1922069	0.264617	GLI2	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr1_-_153013588_153013605	0.263411	GLI2	ENST00000360379.3|SPRR2D|ENSG00000163216.6|small proline-rich protein 2D
hg19_v2_chr1_-_21978312_21978363	0.262502	GLI2	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr19_+_48824711_48824766	0.258881	GLI2	ENST00000599704.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr12_+_7079944_7079999	0.258702	GLI2	ENST00000261406.6|EMG1|ENSG00000126749.10|EMG1 N1-specific pseudouridine methyltransferase
hg19_v2_chr20_-_30310656_30310685	0.258504	GLI2	ENST00000376055.4|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr16_+_57653989_57654022	0.257076	GLI2	ENST00000567835.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000569372.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000563548.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562003.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr14_-_71107921_71108085	0.256101	GLI2	ENST00000553982.1|CTD-2540L5.5|ENSG00000259115.1|CTD-2540L5.5	ENST00000500016.1|CTD-2540L5.6|ENSG00000245466.1|CTD-2540L5.6
hg19_v2_chr6_-_163148700_163148740	0.254331	GLI2	ENST00000366894.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000338468.3|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase
hg19_v2_chr16_+_57653854_57653968	0.250111	GLI2	ENST00000568908.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568909.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566778.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000561988.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr20_+_48599506_48599536	0.247306	GLI2	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr16_+_67062996_67063019	0.245707	GLI2	ENST00000561924.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr8_+_42010464_42010662	0.243739	GLI2	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr20_-_30310693_30310719	0.24293	GLI2	ENST00000307677.4|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420653.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr18_+_56807096_56807175	0.240777	GLI2	ENST00000588875.1|SEC11C|ENSG00000166562.4|SEC11 homolog C (S. cerevisiae)
hg19_v2_chr19_+_48828582_48828637	0.23978	GLI2	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr2_+_186603545_186603622	0.237816	GLI2	ENST00000424728.1|FSIP2|ENSG00000188738.9|fibrous sheath interacting protein 2
hg19_v2_chrX_+_152086373_152086414	0.237785	GLI2	ENST00000318529.8|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain)
hg19_v2_chr1_+_165796753_165796776	0.237669	GLI2	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr20_+_44746939_44746962	0.237032	GLI2	ENST00000372276.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr11_+_18416133_18416251	0.235065	GLI2	ENST00000227157.4|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000478970.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000495052.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr17_+_56270084_56270098	0.233305	GLI2	ENST00000225371.5|EPX|ENSG00000121053.5|eosinophil peroxidase
hg19_v2_chr2_+_37571845_37571874	0.232125	GLI2	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr11_+_18416103_18416118	0.230102	GLI2	ENST00000543445.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000430553.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000396222.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000535451.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr3_-_179169330_179169384	0.228175	GLI2	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr12_-_89920030_89920039	0.225158	GLI2	ENST00000413530.1|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4) 	ENST00000547474.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr21_-_45079341_45079400	0.225019	GLI2	ENST00000443485.1|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein 	ENST00000291560.2|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein
hg19_v2_chr2_+_37571717_37571779	0.223648	GLI2	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chrX_-_15332665_15332693	0.222115	GLI2	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chrX_-_48271344_48271344	0.220905	GLI2	ENST00000376884.2|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B 	ENST00000396928.1|SSX4B|ENSG00000198946.3|synovial sarcoma, X breakpoint 4B
hg19_v2_chr6_+_43739697_43739752	0.220426	GLI2	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr1_-_241520385_241520457	0.220404	GLI2	ENST00000366564.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr3_+_179280668_179280769	0.219926	GLI2	ENST00000429709.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000450518.2|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000392662.1|ACTL6A|ENSG00000136518.12|actin-like 6A 	ENST00000490364.1|ACTL6A|ENSG00000136518.12|actin-like 6A
hg19_v2_chr7_-_27170352_27170418	0.219869	GLI2	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr16_+_56385290_56385353	0.21983	GLI2	ENST00000564727.1|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr1_-_241520525_241520536	0.218818	GLI2	ENST00000366565.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chrX_-_52683950_52683950	0.218747	GLI2	ENST00000298181.5|SSX7|ENSG00000187754.8|synovial sarcoma, X breakpoint 7
hg19_v2_chr10_+_71389983_71390040	0.218506	GLI2	ENST00000373279.4|C10orf35|ENSG00000171224.7|chromosome 10 open reading frame 35
hg19_v2_chr19_+_10563567_10563617	0.216779	GLI2	ENST00000344979.3|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr16_+_2880369_2880430	0.215609	GLI2	ENST00000572863.1|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr19_+_45417921_45417970	0.215423	GLI2	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr1_+_70876891_70876917	0.213058	GLI2	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr3_-_192635943_192635955	0.211107	GLI2	ENST00000392452.2|MB21D2|ENSG00000180611.6|Mab-21 domain containing 2
hg19_v2_chr12_+_112563335_112563371	0.210591	GLI2	ENST00000549358.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000257604.5|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000548092.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1 	ENST00000552896.1|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1
hg19_v2_chr8_+_134203303_134203380	0.207494	GLI2	ENST00000519433.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000517423.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000377863.2|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000220856.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr4_+_95128996_95129056	0.20698	GLI2	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr7_-_994302_994333	0.206398	GLI2	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr14_-_106068065_106068065	0.206337	GLI2	ENST00000390541.2|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr8_+_11627148_11627197	0.205548	GLI2	ENST00000436750.3|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli)
hg19_v2_chr22_+_39378375_39378428	0.205546	GLI2	ENST00000402182.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B 	ENST00000333467.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr22_+_39378346_39378366	0.204088	GLI2	ENST00000407298.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr3_-_45957088_45957112	0.203636	GLI2	ENST00000539217.1|LZTFL1|ENSG00000163818.12|leucine zipper transcription factor-like 1
hg19_v2_chr4_+_95129061_95129198	0.20269	GLI2	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr18_+_12948000_12948057	0.202626	GLI2	ENST00000585730.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000399892.2|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000589446.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000587761.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae)
hg19_v2_chr11_-_18765389_18765499	0.200752	GLI2	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr1_+_35220613_35220718	0.19933	GLI2	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr15_+_98503922_98503964	0.197082	GLI2	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr8_+_11627205_11627288	0.196971	GLI2	ENST00000455213.2|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000403422.3|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000528323.1|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli) 	ENST00000284503.6|NEIL2|ENSG00000154328.11|nei endonuclease VIII-like 2 (E. coli)
hg19_v2_chr16_+_28996114_28996166	0.19611	GLI2	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr16_+_2880157_2880210	0.195196	GLI2	ENST00000382280.3|ZG16B|ENSG00000162078.7|zymogen granule protein 16B
hg19_v2_chr3_+_153839149_153839251	0.192946	GLI2	ENST00000465093.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26 	ENST00000465817.1|ARHGEF26|ENSG00000114790.8|Rho guanine nucleotide exchange factor (GEF) 26
hg19_v2_chr11_+_62495541_62495617	0.192164	GLI2	ENST00000530625.1|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C 	ENST00000513247.2|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr10_+_115438920_115438963	0.190726	GLI2	ENST00000429617.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000369331.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr20_+_44746885_44746914	0.19017	GLI2	ENST00000372285.3|CD40|ENSG00000101017.9|CD40 molecule, TNF receptor superfamily member 5
hg19_v2_chr6_-_168479839_168479904	0.189613	GLI2	ENST00000283309.6|FRMD1|ENSG00000153303.12|FERM domain containing 1
hg19_v2_chr7_+_5919458_5919458	0.189253	GLI2	ENST00000416608.1|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr5_+_113769205_113769227	0.188577	GLI2	ENST00000503706.1|KCNN2|ENSG00000080709.10|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
hg19_v2_chr3_-_50336548_50336742	0.18821	GLI2	ENST00000450489.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000513170.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000450982.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3
hg19_v2_chr2_-_43266680_43266701	0.188079	GLI2	ENST00000425212.1|AC016735.2|ENSG00000231826.1|AC016735.2	ENST00000422351.1|AC016735.2|ENSG00000231826.1|AC016735.2	ENST00000449766.1|AC016735.2|ENSG00000231826.1|AC016735.2
hg19_v2_chr9_-_130742792_130742821	0.187075	GLI2	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr19_-_54567159_54567226	0.186005	GLI2	ENST00000338372.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1 	ENST00000376626.1|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1
hg19_v2_chr12_-_93323013_93323112	0.185572	GLI2	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr5_+_98109322_98109350	0.185011	GLI2	ENST00000513185.1|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr2_+_65215604_65215625	0.184354	GLI2	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chr1_-_243418621_243418648	0.183971	GLI2	ENST00000366544.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000366543.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr13_-_30169807_30169839	0.183746	GLI2	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr1_+_70876926_70877066	0.182571	GLI2	ENST00000370938.3|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase) 	ENST00000346806.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr4_+_38511367_38511408	0.182258	GLI2	ENST00000507056.1|RP11-213G21.1|ENSG00000249667.1|RP11-213G21.1
hg19_v2_chr17_+_73629500_73629532	0.182084	GLI2	ENST00000375215.3|SMIM5|ENSG00000204323.5|small integral membrane protein 5
hg19_v2_chr12_+_101673872_101673912	0.180107	GLI2	ENST00000261637.4|UTP20|ENSG00000120800.4|UTP20, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr17_-_77925806_77925817	0.178154	GLI2	ENST00000574241.2|TBC1D16|ENSG00000167291.11|TBC1 domain family, member 16
hg19_v2_chr9_+_4839762_4839779	0.177479	GLI2	ENST00000448872.2|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1 	ENST00000441844.1|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1
hg19_v2_chr14_-_51297197_51297327	0.17734	GLI2	ENST00000382043.4|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr1_+_154966058_154966066	0.176079	GLI2	ENST00000392487.1|LENEP|ENSG00000163352.5|lens epithelial protein
hg19_v2_chr5_-_95297678_95297775	0.176067	GLI2	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr1_-_52499443_52499499	0.176019	GLI2	ENST00000371614.1|KTI12|ENSG00000198841.3|KTI12 homolog, chromatin associated (S. cerevisiae)
hg19_v2_chr5_-_89705537_89705610	0.175961	GLI2	ENST00000522864.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522083.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522565.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522842.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000283122.3|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3
hg19_v2_chr9_+_841690_841702	0.175843	GLI2	ENST00000382276.3|DMRT1|ENSG00000137090.7|doublesex and mab-3 related transcription factor 1
hg19_v2_chr19_+_55795493_55795534	0.175693	GLI2	ENST00000309383.1|BRSK1|ENSG00000160469.12|BR serine/threonine kinase 1
hg19_v2_chr10_+_70320413_70320413	0.175022	GLI2	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr5_-_60458179_60458310	0.173101	GLI2	ENST00000507416.1|SMIM15|ENSG00000188725.3|small integral membrane protein 15 	ENST00000339020.3|SMIM15|ENSG00000188725.3|small integral membrane protein 15
hg19_v2_chr2_+_128180842_128180878	0.171798	GLI2	ENST00000402125.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr14_+_24605389_24605446	0.171627	GLI2	ENST00000382708.3|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000561435.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr19_+_10381769_10381803	0.171159	GLI2	ENST00000423829.2|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1 	ENST00000588645.1|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1
hg19_v2_chr5_+_161494770_161494787	0.170947	GLI2	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr3_-_184870751_184870872	0.170308	GLI2	ENST00000335012.2|C3orf70|ENSG00000187068.2|chromosome 3 open reading frame 70
hg19_v2_chr16_-_11681316_11681419	0.170214	GLI2	ENST00000571688.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr7_-_131241361_131241398	0.168964	GLI2	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr22_-_50964849_50964903	0.168321	GLI2	ENST00000543927.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein 	ENST00000423348.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein
hg19_v2_chr21_-_28338732_28338832	0.167613	GLI2	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr15_+_49447947_49448036	0.166585	GLI2	ENST00000327171.3|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560654.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr12_-_89919765_89919849	0.166495	GLI2	ENST00000541909.1|POC1B|ENSG00000139323.9|POC1 centriolar protein B 	ENST00000313546.3|POC1B|ENSG00000139323.9|POC1 centriolar protein B
hg19_v2_chr12_+_57853918_57853934	0.166178	GLI2	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr20_-_61051026_61051057	0.166014	GLI2	ENST00000252997.2|GATA5|ENSG00000130700.6|GATA binding protein 5
hg19_v2_chr16_+_67063262_67063364	0.165169	GLI2	ENST00000565389.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr19_+_3539152_3539177	0.164114	GLI2	ENST00000329493.5|C19orf71|ENSG00000183397.5|chromosome 19 open reading frame 71
hg19_v2_chr4_-_57687847_57687911	0.163615	GLI2	ENST00000504762.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000248701.4|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) 	ENST00000506738.1|SPINK2|ENSG00000128040.6|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)
hg19_v2_chr10_-_99258135_99258195	0.162914	GLI2	ENST00000327238.10|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000327277.7|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000355839.6|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000437002.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000422685.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae)
hg19_v2_chr10_+_75936444_75936537	0.161068	GLI2	ENST00000372734.3|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000541550.1|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr17_+_7483761_7483825	0.160682	GLI2	ENST00000584180.1|CD68|ENSG00000129226.9|CD68 molecule
hg19_v2_chr3_-_126236605_126236621	0.16046	GLI2	ENST00000290868.2|UROC1|ENSG00000159650.4|urocanate hydratase 1
hg19_v2_chr1_-_38273840_38273888	0.160316	GLI2	ENST00000373044.2|YRDC|ENSG00000196449.3|yrdC N(6)-threonylcarbamoyltransferase domain containing
hg19_v2_chr5_+_89770664_89770688	0.160045	GLI2	ENST00000503973.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000399107.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr12_+_112563303_112563317	0.159225	GLI2	ENST00000412615.2|TRAFD1|ENSG00000135148.7|TRAF-type zinc finger domain containing 1
hg19_v2_chr11_+_65819802_65819871	0.158624	GLI2	ENST00000528302.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000322535.6|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000524627.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000533595.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa 	ENST00000530322.1|SF3B2|ENSG00000087365.10|splicing factor 3b, subunit 2, 145kDa
hg19_v2_chr16_+_67063036_67063088	0.15834	GLI2	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr17_-_46799872_46799887	0.156799	GLI2	ENST00000290294.3|PRAC1|ENSG00000159182.3|prostate cancer susceptibility candidate 1
hg19_v2_chr17_-_42019836_42019844	0.156583	GLI2	ENST00000225992.3|PPY|ENSG00000108849.3|pancreatic polypeptide
hg19_v2_chr1_-_41487415_41487426	0.156104	GLI2	ENST00000372611.1|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr20_-_18447667_18447829	0.154217	GLI2	ENST00000262547.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000329494.5|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1 	ENST00000357236.4|DZANK1|ENSG00000089091.12|double zinc ribbon and ankyrin repeat domains 1
hg19_v2_chr16_-_3285144_3285191	0.153414	GLI2	ENST00000431561.3|ZNF200|ENSG00000010539.7|zinc finger protein 200 	ENST00000396870.4|ZNF200|ENSG00000010539.7|zinc finger protein 200
hg19_v2_chr19_+_36157715_36157715	0.153031	GLI2	ENST00000379013.2|UPK1A|ENSG00000105668.3|uroplakin 1A 	ENST00000222275.2|UPK1A|ENSG00000105668.3|uroplakin 1A
hg19_v2_chrX_+_70503433_70503517	0.152995	GLI2	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr11_+_60467047_60467063	0.15256	GLI2	ENST00000300226.2|MS4A8|ENSG00000166959.3|membrane-spanning 4-domains, subfamily A, member 8
hg19_v2_chr5_+_89770696_89770727	0.152168	GLI2	ENST00000504930.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000514483.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr8_-_67525524_67525543	0.150442	GLI2	ENST00000517885.1|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr1_-_41487383_41487402	0.150258	GLI2	ENST00000302946.8|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000372613.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000439569.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000397197.2|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr20_-_61885826_61885892	0.150078	GLI2	ENST00000370316.3|NKAIN4|ENSG00000101198.10|Na+/K+ transporting ATPase interacting 4
hg19_v2_chr5_+_7869217_7869352	0.149809	GLI2	ENST00000264668.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000514220.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000341013.6|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000440940.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000502550.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000506877.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase
hg19_v2_chr7_-_127032363_127032420	0.149485	GLI2	ENST00000393312.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr15_-_31453359_31453476	0.149347	GLI2	ENST00000542188.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr9_+_15553000_15553054	0.149067	GLI2	ENST00000297641.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr5_+_149340282_149340336	0.14901	GLI2	ENST00000286298.4|SLC26A2|ENSG00000155850.7|solute carrier family 26 (anion exchanger), member 2
hg19_v2_chr1_+_47799446_47799493	0.147232	GLI2	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr22_+_32149927_32150081	0.146833	GLI2	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chr17_+_80332153_80332153	0.14681	GLI2	ENST00000313135.2|UTS2R|ENSG00000181408.2|urotensin 2 receptor
hg19_v2_chrX_+_12809463_12809607	0.146737	GLI2	ENST00000380663.3|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000380668.5|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000398491.2|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000489404.1|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2
hg19_v2_chr3_+_105085734_105085760	0.146627	GLI2	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr2_-_224702201_224702256	0.146517	GLI2	ENST00000446015.2|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr9_+_131218336_131218366	0.146413	GLI2	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr8_-_133493200_133493352	0.146129	GLI2	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chr8_+_74888417_74888485	0.145634	GLI2	ENST00000517439.1|TMEM70|ENSG00000175606.6|transmembrane protein 70 	ENST00000312184.5|TMEM70|ENSG00000175606.6|transmembrane protein 70
hg19_v2_chr4_+_95128748_95128794	0.145367	GLI2	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr9_-_35958151_35958151	0.145286	GLI2	ENST00000341959.2|OR2S2|ENSG00000122718.4|olfactory receptor, family 2, subfamily S, member 2
hg19_v2_chr17_+_42923686_42923721	0.145032	GLI2	ENST00000591513.1|HIGD1B|ENSG00000131097.2|HIG1 hypoxia inducible domain family, member 1B
hg19_v2_chr14_-_60632162_60632211	0.145027	GLI2	ENST00000557185.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr16_+_25228242_25228273	0.144961	GLI2	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr1_+_156123318_156123358	0.144632	GLI2	ENST00000368285.3|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr2_-_224702257_224702266	0.143424	GLI2	ENST00000409375.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr16_-_28303360_28303393	0.142934	GLI2	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr11_+_62495997_62496011	0.142909	GLI2	ENST00000316461.4|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr8_-_144897549_144897549	0.142613	GLI2	ENST00000356994.2|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein 	ENST00000320476.3|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein
hg19_v2_chr16_-_75300679_75300808	0.141785	GLI2	ENST00000420641.3|BCAR1|ENSG00000050820.12|breast cancer anti-estrogen resistance 1
hg19_v2_chr3_+_46598888_46598888	0.141379	GLI2	ENST00000599511.1|LUZPP1|ENSG00000268324.1|HCG1777807; Leucine zipper protein 3; Uncharacterized protein
hg19_v2_chr2_+_220379052_220379131	0.141306	GLI2	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chr15_+_81589254_81589272	0.141087	GLI2	ENST00000394652.2|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr17_+_7487146_7487211	0.140817	GLI2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr4_-_39529049_39529067	0.140057	GLI2	ENST00000501493.2|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase 	ENST00000509391.1|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase 	ENST00000507089.1|UGDH|ENSG00000109814.7|UDP-glucose 6-dehydrogenase
hg19_v2_chr2_-_175869936_175869954	0.139789	GLI2	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr8_-_90996837_90996944	0.139721	GLI2	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr4_+_166794862_166794896	0.139527	GLI2	ENST00000513213.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr5_+_172332220_172332371	0.138727	GLI2	ENST00000518247.1|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 	ENST00000326654.2|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chr17_-_63556414_63556442	0.138675	GLI2	ENST00000585045.1|AXIN2|ENSG00000168646.8|axin 2
hg19_v2_chr17_+_42219267_42219329	0.137922	GLI2	ENST00000319977.4|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53 	ENST00000585683.1|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr2_-_172290482_172290596	0.137099	GLI2	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr1_+_3388181_3388194	0.135955	GLI2	ENST00000418137.1|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16 	ENST00000413250.2|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16
hg19_v2_chr7_-_92465868_92465922	0.135909	GLI2	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr1_+_156123359_156123398	0.135115	GLI2	ENST00000368284.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000368286.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 	ENST00000438830.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr17_+_36861735_36861795	0.134973	GLI2	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr6_+_26240561_26240628	0.134673	GLI2	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr6_-_29648887_29648944	0.134323	GLI2	ENST00000376883.1|ZFP57|ENSG00000204644.5|ZFP57 zinc finger protein
hg19_v2_chrX_-_48056199_48056233	0.133961	GLI2	ENST00000311798.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5 	ENST00000347757.1|SSX5|ENSG00000165583.9|synovial sarcoma, X breakpoint 5
hg19_v2_chr1_+_231473743_231473807	0.133663	GLI2	ENST00000295050.7|SPRTN|ENSG00000010072.11|SprT-like N-terminal domain
hg19_v2_chr18_+_45778672_45778672	0.133243	GLI2	ENST00000600091.1|AC091150.1|ENSG00000268960.1|HCG1818186; Uncharacterized protein
hg19_v2_chr22_-_20255212_20255212	0.132814	GLI2	ENST00000416372.1|RTN4R|ENSG00000040608.9|reticulon 4 receptor
hg19_v2_chr10_-_35379241_35379294	0.132756	GLI2	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr4_+_57843876_57843937	0.132753	GLI2	ENST00000450656.1|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000381227.1|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chrX_+_48242863_48242939	0.132747	GLI2	ENST00000376886.2|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4 	ENST00000375517.3|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4
hg19_v2_chr11_+_64009072_64009220	0.132742	GLI2	ENST00000535135.1|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa 	ENST00000394540.3|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr20_-_50808290_50808328	0.132707	GLI2	ENST00000346617.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein 	ENST00000371515.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein 	ENST00000371518.2|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr3_-_46759314_46759340	0.132607	GLI2	ENST00000315170.7|PRSS50|ENSG00000206549.8|protease, serine, 50
hg19_v2_chr1_+_154947148_154947175	0.132015	GLI2	ENST00000368436.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B 	ENST00000308987.5|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr3_+_160939050_160939116	0.131334	GLI2	ENST00000493066.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000351193.2|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000472947.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000463518.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor
hg19_v2_chr7_+_149412094_149412148	0.131186	GLI2	ENST00000255992.10|KRBA1|ENSG00000133619.13|KRAB-A domain containing 1 	ENST00000319551.8|KRBA1|ENSG00000133619.13|KRAB-A domain containing 1
hg19_v2_chr2_-_70475586_70475646	0.131151	GLI2	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr17_+_18996287_18996287	0.131011	GLI2	ENST00000399091.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000443876.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042  	ENST00000428928.1|AC007952.5|ENSG00000228157.2|Uncharacterized protein ENSP00000382042
hg19_v2_chr13_-_60737898_60737910	0.130746	GLI2	ENST00000377908.2|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400319.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400320.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000267215.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chrX_+_64887512_64887537	0.130656	GLI2	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr5_-_102455801_102455855	0.130462	GLI2	ENST00000508629.1|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1 	ENST00000399004.2|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1
hg19_v2_chr14_+_102027688_102027833	0.130423	GLI2	ENST00000510508.4|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III 	ENST00000359323.3|DIO3|ENSG00000197406.6|deiodinase, iodothyronine, type III
hg19_v2_chr2_+_220492287_220492338	0.129666	GLI2	ENST00000273063.6|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3 	ENST00000373762.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr12_-_82152420_82152441	0.128342	GLI2	ENST00000552948.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000548586.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr14_-_39572279_39572340	0.128116	GLI2	ENST00000536508.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr5_+_149877334_149877354	0.128049	GLI2	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr1_-_32403370_32403387	0.127746	GLI2	ENST00000534796.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr4_+_8271471_8271504	0.127655	GLI2	ENST00000307358.2|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3 	ENST00000382512.3|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3
hg19_v2_chr1_+_154947126_154947147	0.127514	GLI2	ENST00000368439.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr19_-_10491130_10491220	0.127447	GLI2	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr6_+_27925019_27925019	0.127417	GLI2	ENST00000244623.1|OR2B6|ENSG00000124657.1|olfactory receptor, family 2, subfamily B, member 6
hg19_v2_chr7_+_87257854_87257931	0.126964	GLI2	ENST00000394654.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr2_-_169746878_169746970	0.126379	GLI2	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr8_-_124253576_124253638	0.125477	GLI2	ENST00000276704.4|C8orf76|ENSG00000189376.7|chromosome 8 open reading frame 76
hg19_v2_chr10_+_35894338_35894370	0.125416	GLI2	ENST00000321660.1|GJD4|ENSG00000177291.3|gap junction protein, delta 4, 40.1kDa
hg19_v2_chr6_+_72596406_72596454	0.125146	GLI2	ENST00000491071.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_43735678_43735696	0.125087	GLI2	ENST00000432792.2|TMEM125|ENSG00000179178.6|transmembrane protein 125
hg19_v2_chr20_+_36932521_36932532	0.124958	GLI2	ENST00000262865.4|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr17_-_79827808_79827882	0.124413	GLI2	ENST00000580685.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr22_-_46373004_46373016	0.124369	GLI2	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr16_+_1306093_1306134	0.123172	GLI2	ENST00000211076.3|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr14_-_91976488_91976661	0.122863	GLI2	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr19_-_37263693_37263716	0.122814	GLI2	ENST00000591344.1|ZNF850|ENSG00000267041.1|zinc finger protein 850
hg19_v2_chr20_-_23969416_23969416	0.122281	GLI2	ENST00000335694.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1
hg19_v2_chr1_+_43735646_43735665	0.122155	GLI2	ENST00000439858.1|TMEM125|ENSG00000179178.6|transmembrane protein 125
hg19_v2_chr1_-_16563641_16563709	0.121419	GLI2	ENST00000375599.3|RSG1|ENSG00000132881.7|REM2 and RAB-like small GTPase 1
hg19_v2_chr1_+_244998918_244998975	0.121146	GLI2	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr16_+_67063142_67063153	0.12081	GLI2	ENST00000412916.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr16_-_11680791_11680813	0.120722	GLI2	ENST00000571976.1|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor 	ENST00000413364.2|LITAF|ENSG00000189067.8|lipopolysaccharide-induced TNF factor
hg19_v2_chr3_-_38691119_38691203	0.120654	GLI2	ENST00000333535.4|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000413689.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000443581.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000425664.1|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit 	ENST00000451551.2|SCN5A|ENSG00000183873.11|sodium channel, voltage-gated, type V, alpha subunit
hg19_v2_chrX_-_15402498_15402515	0.119721	GLI2	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr2_+_172290707_172290764	0.119473	GLI2	ENST00000375255.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17 	ENST00000539783.1|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr19_+_19174795_19174833	0.118838	GLI2	ENST00000318596.7|SLC25A42|ENSG00000181035.9|solute carrier family 25, member 42
hg19_v2_chr3_+_156008809_156008839	0.11867	GLI2	ENST00000302490.8|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr20_+_35202909_35203075	0.118485	GLI2	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr4_+_107236722_107236767	0.11777	GLI2	ENST00000442366.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr3_+_54157480_54157547	0.117534	GLI2	ENST00000490478.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr12_-_9885702_9885717	0.117527	GLI2	ENST00000542530.1|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr1_-_153433120_153433177	0.117402	GLI2	ENST00000368723.3|S100A7|ENSG00000143556.4|S100 calcium binding protein A7
hg19_v2_chr22_-_24384240_24384255	0.116898	GLI2	ENST00000439996.2|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1 	ENST00000417870.1|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1
hg19_v2_chr19_-_40562063_40562143	0.116736	GLI2	ENST00000598845.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000593605.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000221355.6|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000434248.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B
hg19_v2_chr16_-_53537105_53537163	0.116511	GLI2	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr7_-_91875109_91875260	0.115473	GLI2	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr4_-_168155417_168155483	0.115144	GLI2	ENST00000511269.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000506697.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512042.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr2_+_241544834_241544862	0.114918	GLI2	ENST00000319838.5|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000403859.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000438013.2|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr12_+_57984965_57985059	0.114468	GLI2	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr1_+_179262905_179262986	0.11439	GLI2	ENST00000539888.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000540564.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000535686.1|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1 	ENST00000367619.3|SOAT1|ENSG00000057252.8|sterol O-acyltransferase 1
hg19_v2_chr19_-_35981358_35981433	0.114311	GLI2	ENST00000484218.2|KRTDAP|ENSG00000188508.6|keratinocyte differentiation-associated protein 	ENST00000338897.3|KRTDAP|ENSG00000188508.6|keratinocyte differentiation-associated protein
hg19_v2_chr22_-_24384260_24384284	0.1141	GLI2	ENST00000248935.5|GSTT1|ENSG00000184674.8|glutathione S-transferase theta 1
hg19_v2_chr17_-_3794021_3794042	0.113313	GLI2	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr7_-_141673573_141673573	0.112453	GLI2	ENST00000547270.1|TAS2R38|ENSG00000257138.1|taste receptor, type 2, member 38
hg19_v2_chr20_-_25062767_25062779	0.111893	GLI2	ENST00000429762.3|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000444511.2|VSX1|ENSG00000100987.10|visual system homeobox 1 	ENST00000376707.3|VSX1|ENSG00000100987.10|visual system homeobox 1
hg19_v2_chr14_-_39572345_39572453	0.111028	GLI2	ENST00000548032.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000556092.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000557280.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000545328.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000553970.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr1_-_204654481_204654512	0.111024	GLI2	ENST00000367176.3|LRRN2|ENSG00000170382.7|leucine rich repeat neuronal 2
hg19_v2_chr14_-_37051798_37051831	0.11101	GLI2	ENST00000258829.5|NKX2-8|ENSG00000136327.6|NK2 homeobox 8
hg19_v2_chr11_-_13484713_13484850	0.110435	GLI2	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr19_+_45417812_45417869	0.110263	GLI2	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr14_+_24605361_24605381	0.109942	GLI2	ENST00000206451.6|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) 	ENST00000559123.1|PSME1|ENSG00000092010.10|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
hg19_v2_chr19_-_51512804_51512837	0.109915	GLI2	ENST00000594211.1|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9 	ENST00000376832.4|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9
hg19_v2_chr9_+_15553055_15553101	0.109886	GLI2	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr11_-_64815333_64815409	0.10984	GLI2	ENST00000533842.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000532802.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000530139.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1 	ENST00000526516.1|NAALADL1|ENSG00000168060.10|N-acetylated alpha-linked acidic dipeptidase-like 1
hg19_v2_chr1_+_153600869_153600940	0.109703	GLI2	ENST00000292169.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000368696.3|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000436839.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1
hg19_v2_chr16_-_89883015_89883088	0.109649	GLI2	ENST00000563673.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389301.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000568369.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000534992.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389302.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000543736.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A
hg19_v2_chr9_+_131219179_131219198	0.109616	GLI2	ENST00000372791.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr17_-_30185971_30186093	0.109232	GLI2	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr5_+_80597419_80597448	0.109097	GLI2	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr5_+_82373379_82373444	0.108867	GLI2	ENST00000396027.4|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000511817.1|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr4_+_76649797_76650004	0.108714	GLI2	ENST00000538159.1|USO1|ENSG00000138768.10|USO1 vesicle transport factor 	ENST00000514213.2|USO1|ENSG00000138768.10|USO1 vesicle transport factor
hg19_v2_chr19_-_10491234_10491352	0.108305	GLI2	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr12_+_50355647_50355661	0.108227	GLI2	ENST00000293599.6|AQP5|ENSG00000161798.6|aquaporin 5
hg19_v2_chr19_+_45445491_45445513	0.107868	GLI2	ENST00000592954.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000419266.2|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000589057.1|APOC4-APOC2|ENSG00000224916.4|APOC4-APOC2 readthrough (NMD candidate)
hg19_v2_chr1_+_210111570_210111603	0.107442	GLI2	ENST00000367019.1|SYT14|ENSG00000143469.12|synaptotagmin XIV 	ENST00000472886.1|SYT14|ENSG00000143469.12|synaptotagmin XIV
hg19_v2_chr2_+_32502952_32503025	0.107362	GLI2	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr1_-_85358850_85358906	0.107187	GLI2	ENST00000370611.3|LPAR3|ENSG00000171517.5|lysophosphatidic acid receptor 3
hg19_v2_chr20_+_43514320_43514425	0.10704	GLI2	ENST00000372839.3|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 	ENST00000428262.1|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 	ENST00000445830.1|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr9_+_140149625_140149674	0.10695	GLI2	ENST00000343053.4|NELFB|ENSG00000188986.4|negative elongation factor complex member B
hg19_v2_chr7_-_44180673_44180687	0.106849	GLI2	ENST00000457314.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000447951.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000431007.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr8_-_134115118_134115298	0.106359	GLI2	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr9_+_33265011_33265059	0.106356	GLI2	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr22_+_20193905_20193930	0.106266	GLI2	ENST00000609602.1|LINC00896|ENSG00000236499.2|long intergenic non-protein coding RNA 896
hg19_v2_chr6_+_26204825_26204858	0.106242	GLI2	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr4_-_156298087_156298127	0.105529	GLI2	ENST00000311277.4|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr8_-_37457350_37457382	0.105185	GLI2	ENST00000519691.1|RP11-150O12.3|ENSG00000254290.1|RP11-150O12.3
hg19_v2_chr2_+_128175997_128176020	0.105022	GLI2	ENST00000234071.3|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000429925.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000442644.1|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa) 	ENST00000453608.2|PROC|ENSG00000115718.13|protein C (inactivator of coagulation factors Va and VIIIa)
hg19_v2_chr20_-_62475273_62475273	0.104904	GLI2	ENST00000596861.1|AL158091.1|ENSG00000269223.1|Protein LOC100509861
hg19_v2_chrX_+_129040122_129040174	0.104481	GLI2	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr6_+_158402860_158403070	0.10446	GLI2	ENST00000367122.2|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367121.3|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000355585.4|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367113.4|SYNJ2|ENSG00000078269.9|synaptojanin 2
hg19_v2_chr1_-_40042416_40042470	0.104393	GLI2	ENST00000372857.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000372856.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000531243.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000451091.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v2_chrX_-_152989798_152990152	0.10435	GLI2	ENST00000441714.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000442093.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000429550.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000345046.6|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr17_+_42219383_42219424	0.104155	GLI2	ENST00000245382.6|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr19_+_44220162_44220214	0.104032	GLI2	ENST00000244314.5|IRGC|ENSG00000124449.6|immunity-related GTPase family, cinema
hg19_v2_chr5_+_64920543_64920592	0.103861	GLI2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr3_-_155524049_155524140	0.10382	GLI2	ENST00000534941.1|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33 	ENST00000340171.2|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33
hg19_v2_chr3_-_56717246_56717324	0.10367	GLI2	ENST00000355628.5|FAM208A|ENSG00000163946.9|family with sequence similarity 208, member A
hg19_v2_chr11_+_117103441_117103452	0.103615	GLI2	ENST00000531287.1|RNF214|ENSG00000167257.6|ring finger protein 214 	ENST00000531452.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr16_-_3767551_3767598	0.103402	GLI2	ENST00000246957.5|TRAP1|ENSG00000126602.6|TNF receptor-associated protein 1
hg19_v2_chr14_-_94856951_94856979	0.103243	GLI2	ENST00000553327.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000556955.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000557118.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000440909.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chrX_+_24072833_24072907	0.103087	GLI2	ENST00000253039.4|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chr17_-_30186328_30186356	0.102777	GLI2	ENST00000302362.6|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr6_-_99963252_99963264	0.102219	GLI2	ENST00000392738.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000327681.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000472914.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr9_-_136242909_136242953	0.10168	GLI2	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr11_+_67776012_67776048	0.101498	GLI2	ENST00000539229.1|ALDH3B1|ENSG00000006534.11|aldehyde dehydrogenase 3 family, member B1
hg19_v2_chr14_+_29236269_29236287	0.101344	GLI2	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chrX_-_52546033_52546033	0.101243	GLI2	ENST00000375567.3|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr9_-_37785037_37785079	0.100831	GLI2	ENST00000327304.5|EXOSC3|ENSG00000107371.8|exosome component 3 	ENST00000396521.3|EXOSC3|ENSG00000107371.8|exosome component 3
hg19_v2_chr3_-_49066811_49066851	0.100749	GLI2	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr16_-_850723_850741	0.0999158	GLI2	ENST00000248150.4|GNG13|ENSG00000127588.4|guanine nucleotide binding protein (G protein), gamma 13
hg19_v2_chr16_+_88493879_88493879	0.0998042	GLI2	ENST00000565624.1|ZNF469|ENSG00000225614.2|zinc finger protein 469 	ENST00000437464.1|ZNF469|ENSG00000225614.2|zinc finger protein 469
hg19_v2_chr4_+_72052964_72053013	0.0997958	GLI2	ENST00000264485.5|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000425175.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chrX_-_129402857_129402880	0.0997764	GLI2	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr4_+_107237660_107237685	0.0997357	GLI2	ENST00000394701.4|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr17_+_74723031_74723047	0.099549	GLI2	ENST00000586200.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr1_-_165414414_165414433	0.0992946	GLI2	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chr1_+_162531294_162531332	0.0989809	GLI2	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr13_-_108867101_108867130	0.0989143	GLI2	ENST00000356922.4|LIG4|ENSG00000174405.9|ligase IV, DNA, ATP-dependent
hg19_v2_chr16_+_1306060_1306088	0.0987236	GLI2	ENST00000397534.2|TPSD1|ENSG00000095917.9|tryptase delta 1
hg19_v2_chr10_-_101380121_101380235	0.09872	GLI2	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr10_-_120938303_120938345	0.0981291	GLI2	ENST00000356951.3|PRDX3|ENSG00000165672.5|peroxiredoxin 3 	ENST00000298510.2|PRDX3|ENSG00000165672.5|peroxiredoxin 3
hg19_v2_chrX_+_51075658_51075686	0.0974696	GLI2	ENST00000356450.2|NUDT10|ENSG00000122824.6|nudix (nucleoside diphosphate linked moiety X)-type motif 10
hg19_v2_chr19_-_38397228_38397266	0.0972622	GLI2	ENST00000447313.2|WDR87|ENSG00000171804.5|WD repeat domain 87
hg19_v2_chr1_-_53608289_53608315	0.0971932	GLI2	ENST00000371491.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr19_+_45417504_45417589	0.0971446	GLI2	ENST00000588750.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000588802.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr13_+_97928395_97928458	0.0963458	GLI2	ENST00000445661.2|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr5_-_89770582_89770603	0.0962153	GLI2	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr19_+_14444525_14444559	0.0959421	GLI2	ENST00000588275.1|CTC-548K16.1|ENSG00000267147.1|CTC-548K16.1
hg19_v2_chr12_-_7904201_7904218	0.0958015	GLI2	ENST00000354629.5|CLEC4C|ENSG00000198178.6|C-type lectin domain family 4, member C
hg19_v2_chr12_+_51633061_51633095	0.0949729	GLI2	ENST00000551313.1|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr4_+_107236847_107236876	0.0947031	GLI2	ENST00000358008.3|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr5_+_82373317_82373375	0.0944666	GLI2	ENST00000282268.3|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000338635.6|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr1_+_41707996_41708045	0.0943573	GLI2	ENST00000425554.1|RP11-399E6.1|ENSG00000235358.1|RP11-399E6.1
hg19_v2_chr1_-_161207875_161207901	0.0942406	GLI2	ENST00000512372.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000437437.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000442691.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000412844.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000428574.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000505005.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508740.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508387.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000504010.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511676.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000502985.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367981.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000515621.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511944.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511748.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367984.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367985.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr19_-_10530784_10530827	0.0942382	GLI2	ENST00000593124.1|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr14_+_96968707_96968788	0.0935357	GLI2	ENST00000216277.8|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557320.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000557471.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr9_+_88556036_88556101	0.0932144	GLI2	ENST00000361671.5|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENST00000416045.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr10_+_135043750_135043778	0.093039	GLI2	ENST00000304477.2|UTF1|ENSG00000171794.3|undifferentiated embryonic cell transcription factor 1
hg19_v2_chr12_-_110318263_110318320	0.092863	GLI2	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr8_+_27183033_27183088	0.0927042	GLI2	ENST00000420218.2|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr20_+_42295745_42295797	0.0918753	GLI2	ENST00000396863.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2 	ENST00000217026.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2
hg19_v2_chr17_-_46691990_46692066	0.0918209	GLI2	ENST00000576562.1|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr16_-_71842941_71843016	0.0918082	GLI2	ENST00000423132.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000433195.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569748.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000570017.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr19_+_50180409_50180501	0.0916964	GLI2	ENST00000391851.4|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr20_+_814349_814375	0.0916539	GLI2	ENST00000381941.3|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr16_+_28834303_28834467	0.091584	GLI2	ENST00000340394.8|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000325215.6|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000395547.2|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000336783.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000382686.4|ATXN2L|ENSG00000168488.14|ataxin 2-like 	ENST00000564304.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chr6_-_53213587_53213772	0.0907693	GLI2	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr16_+_89989687_89989774	0.0906164	GLI2	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr1_-_231473578_231473619	0.090341	GLI2	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr1_+_160121356_160121363	0.090252	GLI2	ENST00000368081.4|ATP1A4|ENSG00000132681.12|ATPase, Na+/K+ transporting, alpha 4 polypeptide
hg19_v2_chr1_-_47407136_47407154	0.0901593	GLI2	ENST00000462347.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000371905.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000310638.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr2_+_220492373_220492391	0.0898908	GLI2	ENST00000317151.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr19_-_6424783_6424805	0.0897087	GLI2	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr20_+_30639991_30640001	0.0894152	GLI2	ENST00000534862.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000538448.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375862.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr12_-_2944184_2944209	0.089318	GLI2	ENST00000337508.4|NRIP2|ENSG00000053702.10|nuclear receptor interacting protein 2
hg19_v2_chr8_+_38965048_38965292	0.0888583	GLI2	ENST00000399831.3|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000437682.2|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000519315.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000379907.4|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000522506.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32
hg19_v2_chr8_+_11561660_11561751	0.0888153	GLI2	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr14_-_94857004_94857030	0.0887027	GLI2	ENST00000557492.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000448921.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000437397.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000355814.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000393088.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr12_+_52281744_52281902	0.0885628	GLI2	ENST00000301190.6|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33 	ENST00000538991.1|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33
hg19_v2_chr17_-_19062424_19062424	0.08811	GLI2	ENST00000399083.1|AC007952.6|ENSG00000197665.5|Uncharacterized protein
hg19_v2_chr6_+_33422343_33422394	0.0878945	GLI2	ENST00000395064.2|ZBTB9|ENSG00000213588.4|zinc finger and BTB domain containing 9
hg19_v2_chrX_-_152989531_152989568	0.0877377	GLI2	ENST00000458587.2|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000416815.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr3_-_88108192_88108203	0.0870207	GLI2	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr4_+_62067860_62067900	0.0870001	GLI2	ENST00000514591.1|LPHN3|ENSG00000150471.11|latrophilin 3
hg19_v2_chr4_+_166128735_166128813	0.0862687	GLI2	ENST00000226725.6|KLHL2|ENSG00000109466.9|kelch-like family member 2
hg19_v2_chr20_+_30640004_30640091	0.0860045	GLI2	ENST00000520553.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000518730.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375852.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr4_-_5894777_5894799	0.0858307	GLI2	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr3_+_54156664_54156694	0.0855144	GLI2	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr3_+_124355944_124356002	0.0853221	GLI2	ENST00000459915.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr22_-_37505588_37505607	0.0851585	GLI2	ENST00000406856.1|TMPRSS6|ENSG00000187045.12|transmembrane protease, serine 6
hg19_v2_chr19_-_58874112_58874214	0.0850034	GLI2	ENST00000311044.3|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000595763.1|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000425453.3|ZNF497|ENSG00000174586.6|zinc finger protein 497
hg19_v2_chr15_+_27112948_27113033	0.0849523	GLI2	ENST00000555060.1|GABRA5|ENSG00000186297.7|gamma-aminobutyric acid (GABA) A receptor, alpha 5
hg19_v2_chrX_-_7066159_7066231	0.0849266	GLI2	ENST00000486446.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000412827.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000424830.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000381077.5|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000540122.1|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1
hg19_v2_chr11_+_64358686_64358700	0.0844571	GLI2	ENST00000473690.1|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr6_-_128222103_128222226	0.0840752	GLI2	ENST00000434358.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000543064.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000368248.2|THEMIS|ENSG00000172673.6|thymocyte selection associated
hg19_v2_chr20_+_49348081_49348096	0.0837086	GLI2	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr13_+_25670268_25670315	0.0836414	GLI2	ENST00000281589.3|PABPC3|ENSG00000151846.7|poly(A) binding protein, cytoplasmic 3
hg19_v2_chr17_+_40274756_40274831	0.0835943	GLI2	ENST00000355067.3|HSPB9|ENSG00000197723.3|heat shock protein, alpha-crystallin-related, B9
hg19_v2_chr20_+_43514315_43514319	0.083589	GLI2	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr6_-_53530474_53530508	0.0835699	GLI2	ENST00000370905.3|KLHL31|ENSG00000124743.5|kelch-like family member 31
hg19_v2_chrX_-_135056106_135056128	0.0833234	GLI2	ENST00000433339.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr12_+_132568814_132569025	0.0831867	GLI2	ENST00000454179.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000389560.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000443539.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000392352.1|EP400NL|ENSG00000185684.8|EP400 N-terminal like
hg19_v2_chr5_+_161495038_161495056	0.0830638	GLI2	ENST00000393933.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr14_+_96968802_96968895	0.0827777	GLI2	ENST00000556619.1|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha 	ENST00000392990.2|PAPOLA|ENSG00000090060.13|poly(A) polymerase alpha
hg19_v2_chr20_-_50722183_50722217	0.082764	GLI2	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr3_+_112930387_112930431	0.08276	GLI2	ENST00000485230.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr3_+_138067666_138067745	0.0827594	GLI2	ENST00000475711.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog 	ENST00000464896.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr12_-_43945724_43945724	0.0827451	GLI2	ENST00000389420.3|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20 	ENST00000553158.1|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20
hg19_v2_chr22_-_46450024_46450110	0.0826682	GLI2	ENST00000396008.2|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26 	ENST00000333761.1|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26
hg19_v2_chr1_+_3614591_3614622	0.0825188	GLI2	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr7_+_100612904_100612904	0.0820346	GLI2	ENST00000379442.3|MUC12|ENSG00000205277.5|mucin 12, cell surface associated 	ENST00000536621.1|MUC12|ENSG00000205277.5|mucin 12, cell surface associated
hg19_v2_chr12_-_122985067_122985268	0.0820143	GLI2	ENST00000540586.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8 	ENST00000543897.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr22_-_24622080_24622080	0.0819833	GLI2	ENST00000425408.1|GGT5|ENSG00000099998.13|gamma-glutamyltransferase 5
hg19_v2_chr22_-_21482352_21482352	0.0816227	GLI2	ENST00000329949.3|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr17_+_6554971_6554995	0.0809395	GLI2	ENST00000391428.2|C17orf100|ENSG00000212734.4|chromosome 17 open reading frame 100
hg19_v2_chr14_+_21467414_21467463	0.0806551	GLI2	ENST00000554422.1|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2 	ENST00000298681.4|SLC39A2|ENSG00000165794.5|solute carrier family 39 (zinc transporter), member 2
hg19_v2_chr19_+_50180507_50180551	0.0802619	GLI2	ENST00000454376.2|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1 	ENST00000524771.1|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr3_+_44626446_44626477	0.0802594	GLI2	ENST00000441021.1|ZNF660|ENSG00000144792.5|zinc finger protein 660 	ENST00000322734.2|ZNF660|ENSG00000144792.5|zinc finger protein 660
hg19_v2_chr16_+_84224740_84224746	0.080133	GLI2	ENST00000268624.3|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr7_+_87257701_87257770	0.0801012	GLI2	ENST00000338056.3|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B 	ENST00000493037.1|RUNDC3B|ENSG00000105784.11|RUN domain containing 3B
hg19_v2_chr9_+_103189536_103189601	0.0798716	GLI2	ENST00000374885.1|MSANTD3|ENSG00000066697.10|Myb/SANT-like DNA-binding domain containing 3
hg19_v2_chr9_+_117092149_117092152	0.0797391	GLI2	ENST00000431067.2|ORM2|ENSG00000228278.2|orosomucoid 2 	ENST00000412657.1|ORM2|ENSG00000228278.2|orosomucoid 2
hg19_v2_chr16_+_84224780_84224791	0.0792328	GLI2	ENST00000315906.5|ADAD2|ENSG00000140955.6|adenosine deaminase domain containing 2
hg19_v2_chr1_-_40105617_40105617	0.0784528	GLI2	ENST00000372852.3|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr12_+_3000037_3000067	0.0781522	GLI2	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr8_+_96146168_96146304	0.0779633	GLI2	ENST00000519516.1|PLEKHF2|ENSG00000175895.3|pleckstrin homology domain containing, family F (with FYVE domain) member 2
hg19_v2_chr12_-_112819896_112819896	0.0772342	GLI2	ENST00000377560.5|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000430131.2|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550722.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4 	ENST00000550724.1|HECTD4|ENSG00000173064.6|HECT domain containing E3 ubiquitin protein ligase 4
hg19_v2_chr17_-_73149921_73149971	0.0770828	GLI2	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr4_+_107236692_107236709	0.0767926	GLI2	ENST00000510207.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr6_+_43968306_43968377	0.0767925	GLI2	ENST00000442114.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000336600.5|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000439969.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223
hg19_v2_chr1_-_46089639_46089714	0.0766662	GLI2	ENST00000445048.2|CCDC17|ENSG00000159588.10|coiled-coil domain containing 17
hg19_v2_chr19_-_40791302_40791443	0.0762871	GLI2	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr19_+_23299777_23299844	0.0762029	GLI2	ENST00000597761.2|ZNF730|ENSG00000183850.9|zinc finger protein 730
hg19_v2_chr3_+_15468862_15468909	0.0761963	GLI2	ENST00000396842.2|EAF1|ENSG00000144597.9|ELL associated factor 1
hg19_v2_chr19_-_54567035_54567060	0.0761897	GLI2	ENST00000366170.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1 	ENST00000425006.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1
hg19_v2_chrX_-_148669116_148669116	0.0760119	GLI2	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chr19_+_572543_572579	0.0759264	GLI2	ENST00000333511.3|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000573216.1|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000353555.4|BSG|ENSG00000172270.14|basigin (Ok blood group)
hg19_v2_chr4_-_7069760_7069924	0.0758551	GLI2	ENST00000264954.4|GRPEL1|ENSG00000109519.8|GrpE-like 1, mitochondrial (E. coli)
hg19_v2_chr3_-_169899504_169899542	0.0757866	GLI2	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr14_+_105886150_105886229	0.0751113	GLI2	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr10_-_103454876_103455016	0.0750727	GLI2	ENST00000331272.7|FBXW4|ENSG00000107829.9|F-box and WD repeat domain containing 4
hg19_v2_chr6_+_27356497_27356557	0.0747319	GLI2	ENST00000244576.4|ZNF391|ENSG00000124613.4|zinc finger protein 391
hg19_v2_chr9_-_113800341_113800373	0.0746839	GLI2	ENST00000358883.4|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr6_+_30615167_30615213	0.0742685	GLI2	ENST00000446773.2|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136
hg19_v2_chr17_+_39261584_39261584	0.0742104	GLI2	ENST00000391415.1|KRTAP4-9|ENSG00000212722.6|keratin associated protein 4-9
hg19_v2_chr2_+_131369054_131369054	0.0738891	GLI2	ENST00000409602.1|POTEJ|ENSG00000222038.3|POTE ankyrin domain family, member J
hg19_v2_chr21_+_15588499_15588515	0.0737535	GLI2	ENST00000400577.3|RBM11|ENSG00000185272.9|RNA binding motif protein 11
hg19_v2_chr3_+_11196206_11196220	0.0735008	GLI2	ENST00000431010.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chrX_+_148863584_148863612	0.0734628	GLI2	ENST00000439010.2|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000298974.5|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000522429.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9 	ENST00000519822.1|MAGEA9|ENSG00000166008.5|melanoma antigen family A, 9
hg19_v2_chr11_-_119187826_119187847	0.0731613	GLI2	ENST00000264036.4|MCAM|ENSG00000076706.10|melanoma cell adhesion molecule
hg19_v2_chr6_-_99963286_99963365	0.0729628	GLI2	ENST00000369233.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000500704.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000329966.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr19_+_16178317_16178354	0.0727378	GLI2	ENST00000344824.6|TPM4|ENSG00000167460.10|tropomyosin 4 	ENST00000538887.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr1_-_156918806_156918806	0.0726922	GLI2	ENST00000315174.8|ARHGEF11|ENSG00000132694.14|Rho guanine nucleotide exchange factor (GEF) 11
hg19_v2_chr11_-_63439013_63439091	0.0725294	GLI2	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr7_+_5465382_5465401	0.0724864	GLI2	ENST00000609130.1|RP11-1275H24.2|ENSG00000272953.1|RP11-1275H24.2
hg19_v2_chr16_+_30075783_30075818	0.0720706	GLI2	ENST00000412304.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr3_-_118753626_118753650	0.0720158	GLI2	ENST00000489689.1|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chr11_+_34938119_34938204	0.0717139	GLI2	ENST00000227868.4|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000430469.2|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000533262.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr2_+_220492116_220492137	0.0716992	GLI2	ENST00000373760.2|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr11_-_34937858_34937944	0.0715896	GLI2	ENST00000278359.5|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr7_-_91875358_91875480	0.0713932	GLI2	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr14_-_91976794_91976871	0.071372	GLI2	ENST00000555462.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr12_+_6881678_6881707	0.0712511	GLI2	ENST00000441671.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3 	ENST00000203629.2|LAG3|ENSG00000089692.4|lymphocyte-activation gene 3
hg19_v2_chr22_+_48027423_48027466	0.0710291	GLI2	ENST00000423737.1|RP11-191L9.4|ENSG00000224271.1|RP11-191L9.4
hg19_v2_chr9_-_122131696_122131745	0.0710104	GLI2	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr1_-_2718286_2718286	0.0708803	GLI2	ENST00000401094.6|TTC34|ENSG00000215912.7|tetratricopeptide repeat domain 34
hg19_v2_chr19_+_859425_859481	0.0707926	GLI2	ENST00000327726.6|CFD|ENSG00000197766.3|complement factor D (adipsin)
hg19_v2_chr3_+_112930306_112930338	0.0705033	GLI2	ENST00000495514.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr2_-_74710078_74710142	0.0704426	GLI2	ENST00000290418.4|CCDC142|ENSG00000135637.9|coiled-coil domain containing 142
hg19_v2_chr1_-_182573514_182573543	0.0703852	GLI2	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr18_+_21594384_21594539	0.0703328	GLI2	ENST00000584250.1|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr5_-_132113036_132113061	0.070271	GLI2	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr19_+_11039391_11039409	0.0702447	GLI2	ENST00000270502.6|C19orf52|ENSG00000142444.6|chromosome 19 open reading frame 52
hg19_v2_chr19_+_45418067_45418126	0.0701539	GLI2	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr6_+_30614779_30614850	0.0700031	GLI2	ENST00000293604.6|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136 	ENST00000376473.5|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136
hg19_v2_chr2_-_172750733_172750762	0.0699689	GLI2	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr3_-_119278376_119278403	0.0699549	GLI2	ENST00000478182.1|CD80|ENSG00000121594.7|CD80 molecule
hg19_v2_chr11_-_128392085_128392232	0.0697875	GLI2	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr19_-_58220517_58220583	0.0697217	GLI2	ENST00000512439.2|ZNF154|ENSG00000179909.11|zinc finger protein 154 	ENST00000426889.1|ZNF154|ENSG00000179909.11|zinc finger protein 154
hg19_v2_chrX_+_90689810_90689826	0.0696539	GLI2	ENST00000312600.3|PABPC5|ENSG00000174740.7|poly(A) binding protein, cytoplasmic 5
hg19_v2_chr2_-_85895295_85895331	0.0694372	GLI2	ENST00000428225.1|SFTPB|ENSG00000168878.12|surfactant protein B 	ENST00000519937.2|SFTPB|ENSG00000168878.12|surfactant protein B
hg19_v2_chr19_+_17186577_17186637	0.0693923	GLI2	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chrX_-_30326445_30326605	0.0693535	GLI2	ENST00000378963.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr9_+_4490394_4490446	0.0693468	GLI2	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr6_+_142468383_142468421	0.0687001	GLI2	ENST00000367621.1|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1 	ENST00000452973.2|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr3_-_63849571_63849582	0.0684541	GLI2	ENST00000295899.5|THOC7|ENSG00000163634.7|THO complex 7 homolog (Drosophila)
hg19_v2_chr5_+_67088974_67089048	0.0682621	GLI2	ENST00000513234.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1	ENST00000504068.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1	ENST00000515227.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1
hg19_v2_chr11_-_3078616_3078667	0.0682404	GLI2	ENST00000401769.3|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000278224.9|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000397114.3|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000380525.4|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase
hg19_v2_chr3_+_54156570_54156627	0.068189	GLI2	ENST00000415676.2|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr1_-_161207953_161207975	0.0680427	GLI2	ENST00000367982.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr22_+_18834324_18834324	0.0680262	GLI2	ENST00000342005.4|AC008132.13|ENSG00000161103.7|Uncharacterized protein
hg19_v2_chr11_-_3400442_3400453	0.0679218	GLI2	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr19_-_53757941_53758088	0.0677484	GLI2	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr19_+_13080296_13080395	0.0675196	GLI2	ENST00000317060.2|DAND5|ENSG00000179284.4|DAN domain family member 5, BMP antagonist
hg19_v2_chr5_-_132112921_132112960	0.0671445	GLI2	ENST00000378721.4|SEPT8|ENSG00000164402.9|septin 8 	ENST00000378701.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr14_+_79745682_79745704	0.067139	GLI2	ENST00000557594.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr2_-_224702740_224702761	0.067133	GLI2	ENST00000444408.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr5_-_132113559_132113579	0.0669712	GLI2	ENST00000448933.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr8_+_94929110_94929167	0.0668427	GLI2	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr1_-_161014731_161014788	0.0667397	GLI2	ENST00000368020.1|USF1|ENSG00000158773.10|upstream transcription factor 1
hg19_v2_chr4_+_83351791_83351802	0.0664471	GLI2	ENST00000509635.1|ENOPH1|ENSG00000145293.10|enolase-phosphatase 1
hg19_v2_chr5_+_161275320_161275450	0.0664022	GLI2	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr5_-_64920115_64920174	0.0662265	GLI2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr22_+_39410088_39410088	0.0661258	GLI2	ENST00000361441.4|APOBEC3C|ENSG00000244509.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v2_chrX_+_47082408_47082460	0.0659586	GLI2	ENST00000518022.1|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16 	ENST00000276052.6|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16
hg19_v2_chr3_+_184279566_184279583	0.0656316	GLI2	ENST00000330394.2|EPHB3|ENSG00000182580.2|EPH receptor B3
hg19_v2_chr17_+_7323634_7323679	0.065357	GLI2	ENST00000323675.3|SPEM1|ENSG00000181323.7|spermatid maturation 1
hg19_v2_chr11_-_116662593_116662620	0.0653242	GLI2	ENST00000227665.4|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr4_-_82393009_82393044	0.0651497	GLI2	ENST00000436139.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr8_-_145642267_145642279	0.0651017	GLI2	ENST00000301305.3|SLC39A4|ENSG00000147804.5|solute carrier family 39 (zinc transporter), member 4
hg19_v2_chrX_-_107334750_107334780	0.0648353	GLI2	ENST00000340200.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372296.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000372295.1|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 	ENST00000361815.5|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr11_-_34938039_34938050	0.06482	GLI2	ENST00000395787.3|APIP|ENSG00000149089.8|APAF1 interacting protein
hg19_v2_chr22_+_24115000_24115020	0.0644972	GLI2	ENST00000215743.3|MMP11|ENSG00000099953.5|matrix metallopeptidase 11 (stromelysin 3)
hg19_v2_chr12_-_9885888_9885895	0.0644275	GLI2	ENST00000327839.3|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr17_-_3496171_3496171	0.0643746	GLI2	ENST00000399756.4|TRPV1|ENSG00000196689.6|transient receptor potential cation channel, subfamily V, member 1
hg19_v2_chr1_-_10856694_10856715	0.0641885	GLI2	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr17_+_4710391_4710500	0.0641194	GLI2	ENST00000263088.6|PLD2|ENSG00000129219.9|phospholipase D2 	ENST00000572940.1|PLD2|ENSG00000129219.9|phospholipase D2
hg19_v2_chr4_+_72053017_72053044	0.0640993	GLI2	ENST00000351898.6|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr15_+_52311398_52311461	0.0639924	GLI2	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr11_-_111383064_111383092	0.0638542	GLI2	ENST00000525791.1|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000456861.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4 	ENST00000356018.2|BTG4|ENSG00000137707.9|B-cell translocation gene 4
hg19_v2_chr19_+_58125580_58125639	0.0638318	GLI2	ENST00000600344.1|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000396161.5|ZNF134|ENSG00000213762.6|zinc finger protein 134 	ENST00000600883.1|ZNF134|ENSG00000213762.6|zinc finger protein 134
hg19_v2_chr17_+_6544078_6544125	0.0637405	GLI2	ENST00000250101.5|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr12_+_51632638_51632665	0.0636954	GLI2	ENST00000549732.2|DAZAP2|ENSG00000183283.11|DAZ associated protein 2
hg19_v2_chr17_-_60005365_60005377	0.0636767	GLI2	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr3_-_118753716_118753735	0.0634792	GLI2	ENST00000393775.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chr21_-_40720974_40720994	0.063031	GLI2	ENST00000380748.1|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr13_+_113760098_113760121	0.0629199	GLI2	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr4_-_77069533_77069563	0.0628175	GLI2	ENST00000514987.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000458189.2|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000514901.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000342467.6|NUP54|ENSG00000138750.10|nucleoporin 54kDa
hg19_v2_chr4_-_71705590_71705662	0.0627561	GLI2	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr14_-_74417096_74417117	0.0618459	GLI2	ENST00000286544.3|FAM161B|ENSG00000156050.4|family with sequence similarity 161, member B
hg19_v2_chr1_+_26737253_26737269	0.0617165	GLI2	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr19_-_11039261_11039357	0.0615904	GLI2	ENST00000590329.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000587943.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000585858.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586748.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000586575.1|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2 	ENST00000253031.2|YIPF2|ENSG00000130733.6|Yip1 domain family, member 2
hg19_v2_chr11_+_64008525_64008628	0.0613325	GLI2	ENST00000449942.2|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr17_-_56769382_56769417	0.0611956	GLI2	ENST00000240361.8|TEX14|ENSG00000121101.11|testis expressed 14 	ENST00000349033.5|TEX14|ENSG00000121101.11|testis expressed 14 	ENST00000389934.3|TEX14|ENSG00000121101.11|testis expressed 14
hg19_v2_chr2_+_183989083_183989151	0.0611192	GLI2	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr17_+_43238438_43238461	0.061102	GLI2	ENST00000593138.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000586681.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr3_+_35681081_35681099	0.0609085	GLI2	ENST00000428373.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr19_+_4304585_4304627	0.0607986	GLI2	ENST00000221856.6|FSD1|ENSG00000105255.6|fibronectin type III and SPRY domain containing 1
hg19_v2_chr15_+_40531621_40531719	0.0604406	GLI2	ENST00000560346.1|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr2_-_18741882_18741968	0.0602464	GLI2	ENST00000381249.3|RDH14|ENSG00000240857.1|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
hg19_v2_chr17_+_6544356_6544363	0.059941	GLI2	ENST00000574838.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr10_+_105314881_105314989	0.0598165	GLI2	ENST00000437579.1|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr4_-_187476721_187476721	0.0597242	GLI2	ENST00000307161.5|MTNR1A|ENSG00000168412.6|melatonin receptor 1A
hg19_v2_chr6_+_26273144_26273175	0.0596813	GLI2	ENST00000377733.2|HIST1H2BI|ENSG00000168242.3|histone cluster 1, H2bi
hg19_v2_chr1_-_172413195_172413225	0.0595868	GLI2	ENST00000344529.4|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr8_+_146052849_146053003	0.0595043	GLI2	ENST00000532777.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325241.6|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000446747.2|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000525266.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000544249.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000325217.5|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000533314.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000527218.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000529819.1|ZNF7|ENSG00000147789.11|zinc finger protein 7 	ENST00000528372.1|ZNF7|ENSG00000147789.11|zinc finger protein 7
hg19_v2_chr1_+_201159914_201159958	0.0591459	GLI2	ENST00000335211.4|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000451870.2|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000295591.8|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1
hg19_v2_chr1_+_26737292_26737322	0.0591343	GLI2	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr3_-_23958506_23958556	0.0590675	GLI2	ENST00000425478.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1
hg19_v2_chr3_-_49449350_49449464	0.0587089	GLI2	ENST00000454011.2|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000445425.1|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000422781.1|RHOA|ENSG00000067560.6|ras homolog family member A
hg19_v2_chr19_+_3585471_3585551	0.058579	GLI2	ENST00000322315.5|GIPC3|ENSG00000179855.5|GIPC PDZ domain containing family, member 3
hg19_v2_chr1_-_161208013_161208092	0.0584609	GLI2	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr12_+_69202975_69203013	0.0583987	GLI2	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr11_-_14380664_14380739	0.0583037	GLI2	ENST00000545643.1|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2 	ENST00000256196.4|RRAS2|ENSG00000133818.8|related RAS viral (r-ras) oncogene homolog 2
hg19_v2_chr11_-_86383370_86383441	0.0582126	GLI2	ENST00000526834.1|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial 	ENST00000359636.2|ME3|ENSG00000151376.12|malic enzyme 3, NADP(+)-dependent, mitochondrial
hg19_v2_chr11_+_64358110_64358116	0.0580193	GLI2	ENST00000377567.2|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr10_+_94451574_94451612	0.057632	GLI2	ENST00000492654.2|HHEX|ENSG00000152804.6|hematopoietically expressed homeobox
hg19_v2_chr12_+_65563329_65563373	0.057622	GLI2	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr16_+_56691838_56691862	0.0574754	GLI2	ENST00000394501.2|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr4_-_140477353_140477400	0.0573575	GLI2	ENST00000406354.1|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7 	ENST00000506866.2|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr16_+_30075595_30075636	0.0573235	GLI2	ENST00000563060.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr4_-_46391367_46391436	0.057135	GLI2	ENST00000503806.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000356504.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000514090.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000506961.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2
hg19_v2_chr1_-_172413226_172413248	0.0570542	GLI2	ENST00000367728.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C 	ENST00000258324.1|PIGC|ENSG00000135845.5|phosphatidylinositol glycan anchor biosynthesis, class C
hg19_v2_chr19_-_46142637_46142678	0.0569921	GLI2	ENST00000590043.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000589876.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr19_-_23941680_23941704	0.0566042	GLI2	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr12_+_110338323_110338414	0.056477	GLI2	ENST00000312777.5|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding 	ENST00000536408.2|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr12_+_53645870_53645897	0.0563758	GLI2	ENST00000329548.4|MFSD5|ENSG00000182544.8|major facilitator superfamily domain containing 5
hg19_v2_chr12_+_110338063_110338105	0.0563246	GLI2	ENST00000405876.4|TCHP|ENSG00000139437.13|trichoplein, keratin filament binding
hg19_v2_chr1_+_6105974_6105985	0.0561772	GLI2	ENST00000378083.3|KCNAB2|ENSG00000069424.10|potassium voltage-gated channel, shaker-related subfamily, beta member 2
hg19_v2_chr19_-_44285401_44285446	0.0553618	GLI2	ENST00000262888.3|KCNN4|ENSG00000104783.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
hg19_v2_chr6_+_116892530_116892592	0.0553353	GLI2	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr2_+_183989157_183989179	0.0552892	GLI2	ENST00000541912.1|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr10_-_46970474_46970515	0.0551668	GLI2	ENST00000503753.1|SYT15|ENSG00000204176.9|synaptotagmin XV 	ENST00000374321.4|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr19_-_10450328_10450499	0.0550052	GLI2	ENST00000160262.5|ICAM3|ENSG00000076662.5|intercellular adhesion molecule 3
hg19_v2_chr1_+_244998602_244998646	0.0547077	GLI2	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr18_-_77793891_77793953	0.0543016	GLI2	ENST00000592957.1|TXNL4A|ENSG00000141759.10|thioredoxin-like 4A 	ENST00000585474.1|TXNL4A|ENSG00000141759.10|thioredoxin-like 4A
hg19_v2_chr16_+_56691606_56691719	0.0541484	GLI2	ENST00000334350.6|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr11_+_16760161_16760231	0.0540285	GLI2	ENST00000524439.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000422258.2|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000528634.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58 	ENST00000525684.1|C11orf58|ENSG00000110696.5|chromosome 11 open reading frame 58
hg19_v2_chr14_-_94856987_94857000	0.0539472	GLI2	ENST00000449399.3|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000404814.4|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr16_+_56691911_56691929	0.0538274	GLI2	ENST00000568475.1|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr17_+_6544328_6544342	0.0537751	GLI2	ENST00000570330.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr21_-_40720995_40721126	0.0536812	GLI2	ENST00000380749.5|HMGN1|ENSG00000205581.6|high mobility group nucleosome binding domain 1
hg19_v2_chr12_+_65174519_65174589	0.0536114	GLI2	ENST00000229088.6|TBC1D30|ENSG00000111490.8|TBC1 domain family, member 30
hg19_v2_chr17_-_74582191_74582210	0.0535922	GLI2	ENST00000225276.5|ST6GALNAC2|ENSG00000070731.5|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
hg19_v2_chr5_+_76506706_76506787	0.0533487	GLI2	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr5_-_132112907_132112918	0.0532578	GLI2	ENST00000458488.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr12_+_52282001_52282021	0.0531459	GLI2	ENST00000340970.4|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33
hg19_v2_chr1_-_161207986_161208000	0.0531033	GLI2	ENST00000506209.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367980.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr7_-_112726393_112726567	0.0530287	GLI2	ENST00000449591.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000449735.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000438062.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000424100.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr14_+_79746249_79746291	0.0530252	GLI2	ENST00000428277.2|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr17_+_1944790_1944828	0.0529562	GLI2	ENST00000575162.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr18_+_70536215_70536275	0.0525893	GLI2	ENST00000578967.1|RP11-676J15.1|ENSG00000263958.1|RP11-676J15.1
hg19_v2_chr19_+_4969116_4969143	0.0523278	GLI2	ENST00000588337.1|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000159111.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B 	ENST00000381759.4|KDM4B|ENSG00000127663.10|lysine (K)-specific demethylase 4B
hg19_v2_chr3_-_23958402_23958488	0.0522328	GLI2	ENST00000415901.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000416026.2|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000412028.1|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000388759.3|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1 	ENST00000437230.1|NKIRAS1|ENSG00000197885.6|NFKB inhibitor interacting Ras-like 1
hg19_v2_chr19_+_56915668_56915732	0.0521	GLI2	ENST00000333201.9|ZNF583|ENSG00000198440.5|zinc finger protein 583 	ENST00000391778.3|ZNF583|ENSG00000198440.5|zinc finger protein 583
hg19_v2_chr3_-_128902759_128902770	0.0520399	GLI2	ENST00000422453.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000504813.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000512338.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr11_+_2398524_2398551	0.0519386	GLI2	ENST00000263645.5|CD81|ENSG00000110651.7|CD81 molecule
hg19_v2_chr10_-_45496336_45496379	0.0519009	GLI2	ENST00000298298.1|C10orf25|ENSG00000165511.4|chromosome 10 open reading frame 25
hg19_v2_chr2_+_48541776_48541874	0.0516164	GLI2	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr5_+_148724993_148725102	0.0514813	GLI2	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr11_+_64008443_64008477	0.0513455	GLI2	ENST00000309366.4|FKBP2|ENSG00000173486.8|FK506 binding protein 2, 13kDa
hg19_v2_chr14_+_101908402_101908413	0.0513211	GLI2	ENST00000555725.1|RP11-168L7.3|ENSG00000259082.1|RP11-168L7.3
hg19_v2_chr3_-_185542817_185542844	0.0512762	GLI2	ENST00000382199.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr11_-_66103932_66104000	0.0512462	GLI2	ENST00000311320.4|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr11_-_62783276_62783295	0.0507786	GLI2	ENST00000535878.1|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8 	ENST00000545207.1|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8
hg19_v2_chr14_-_64108537_64108597	0.0505829	GLI2	ENST00000554717.1|WDR89|ENSG00000140006.7|WD repeat domain 89 	ENST00000394942.2|WDR89|ENSG00000140006.7|WD repeat domain 89
hg19_v2_chr22_+_22764088_22764105	0.0504485	GLI2	ENST00000390299.2|IGLV1-40|ENSG00000211653.2|immunoglobulin lambda variable 1-40
hg19_v2_chrX_-_107019181_107019488	0.0503129	GLI2	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr1_-_154193091_154193119	0.050285	GLI2	ENST00000362076.4|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43 	ENST00000350592.3|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43 	ENST00000368516.1|C1orf43|ENSG00000143612.14|chromosome 1 open reading frame 43
hg19_v2_chr5_+_176237478_176237496	0.050247	GLI2	ENST00000329542.4|UNC5A|ENSG00000113763.6|unc-5 homolog A (C. elegans)
hg19_v2_chr1_-_38397384_38397429	0.0502205	GLI2	ENST00000373027.1|INPP5B|ENSG00000204084.8|inositol polyphosphate-5-phosphatase, 75kDa
hg19_v2_chrX_-_119603138_119603220	0.0502149	GLI2	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr1_-_2343951_2344018	0.050168	GLI2	ENST00000288774.3|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000507596.1|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000447513.2|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10
hg19_v2_chr1_+_220267429_220267510	0.0500827	GLI2	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr20_-_13619550_13619587	0.0497193	GLI2	ENST00000455532.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000544472.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000539805.1|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1 	ENST00000337743.4|TASP1|ENSG00000089123.11|taspase, threonine aspartase, 1
hg19_v2_chr3_+_184080387_184080403	0.0496797	GLI2	ENST00000455712.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr1_-_155948218_155948289	0.0494741	GLI2	ENST00000313667.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr1_+_93646238_93646298	0.0493448	GLI2	ENST00000448243.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18 	ENST00000370276.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr19_+_37407212_37407280	0.0492561	GLI2	ENST00000427117.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000587130.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000333987.7|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000415168.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000444991.1|ZNF568|ENSG00000198453.8|zinc finger protein 568
hg19_v2_chr1_-_11115877_11115914	0.0490319	GLI2	ENST00000490101.1|SRM|ENSG00000116649.5|spermidine synthase
hg19_v2_chr3_+_184081175_184081208	0.0489951	GLI2	ENST00000452961.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H 	ENST00000296223.3|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr11_+_64052692_64052747	0.0488838	GLI2	ENST00000377702.4|GPR137|ENSG00000173264.9|G protein-coupled receptor 137
hg19_v2_chr11_+_537494_537537	0.0488802	GLI2	ENST00000270115.7|LRRC56|ENSG00000161328.10|leucine rich repeat containing 56
hg19_v2_chr21_-_46330545_46330741	0.0487522	GLI2	ENST00000320216.6|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000397852.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr11_-_77122928_77123045	0.0480288	GLI2	ENST00000528203.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000528592.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000528633.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1 	ENST00000529248.1|PAK1|ENSG00000149269.5|p21 protein (Cdc42/Rac)-activated kinase 1
hg19_v2_chr1_-_42801540_42801562	0.0479484	GLI2	ENST00000372573.1|FOXJ3|ENSG00000198815.4|forkhead box J3
hg19_v2_chr20_+_2795609_2795620	0.0476394	GLI2	ENST00000554164.1|TMEM239|ENSG00000198326.8|transmembrane protein 239 	ENST00000380593.4|TMEM239|ENSG00000241690.3|CDNA FLJ26142 fis, clone TST04526; Transmembrane protein 239; Uncharacterized protein
hg19_v2_chr22_-_21905750_21905750	0.0476231	GLI2	ENST00000433039.1|RIMBP3C|ENSG00000183246.6|RIMS binding protein 3C
hg19_v2_chr3_+_184081213_184081224	0.0473587	GLI2	ENST00000429568.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr16_+_55690002_55690023	0.0473263	GLI2	ENST00000414754.3|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr8_-_145331153_145331153	0.047149	GLI2	ENST00000377412.4|KM-PA-2|ENSG00000204775.4|KM-PA-2 protein; Uncharacterized protein
hg19_v2_chr19_-_55668093_55668174	0.0469462	GLI2	ENST00000588882.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac) 	ENST00000586858.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac)
hg19_v2_chrX_+_103411189_103411301	0.0469195	GLI2	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr10_-_46970573_46970610	0.0466548	GLI2	ENST00000374325.3|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr1_-_160549235_160549306	0.0466163	GLI2	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr11_+_89764274_89764274	0.0465725	GLI2	ENST00000448984.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C 	ENST00000432771.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C
hg19_v2_chr11_+_20409070_20409164	0.0463718	GLI2	ENST00000331079.6|PRMT3|ENSG00000185238.8|protein arginine methyltransferase 3
hg19_v2_chr1_-_34630820_34630875	0.0463044	GLI2	ENST00000373381.4|CSMD2|ENSG00000121904.13|CUB and Sushi multiple domains 2
hg19_v2_chr9_-_131709858_131709919	0.0459385	GLI2	ENST00000372586.3|DOLK|ENSG00000175283.7|dolichol kinase
hg19_v2_chr15_-_98417780_98417780	0.0457086	GLI2	ENST00000503874.3|LINC00923|ENSG00000251209.3|long intergenic non-protein coding RNA 923
hg19_v2_chr17_+_79213039_79213106	0.0450594	GLI2	ENST00000431388.2|C17orf89|ENSG00000224877.3|chromosome 17 open reading frame 89
hg19_v2_chrX_-_2418936_2419024	0.0449528	GLI2	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr1_-_40157345_40157375	0.0449163	GLI2	ENST00000372844.3|HPCAL4|ENSG00000116983.8|hippocalcin like 4
hg19_v2_chr3_-_128902729_128902753	0.0448496	GLI2	ENST00000451728.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000446936.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000502976.1|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000500450.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein 	ENST00000441626.2|CNBP|ENSG00000169714.12|CCHC-type zinc finger, nucleic acid binding protein
hg19_v2_chr10_+_105315102_105315137	0.0448206	GLI2	ENST00000369777.2|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr16_-_11945370_11945442	0.0446639	GLI2	ENST00000573251.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000355674.5|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000542106.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1 	ENST00000571133.1|RSL1D1|ENSG00000171490.8|ribosomal L1 domain containing 1
hg19_v2_chr2_+_192110199_192110254	0.0445097	GLI2	ENST00000304164.4|MYO1B|ENSG00000128641.13|myosin IB
hg19_v2_chr16_-_67190152_67190152	0.0443021	GLI2	ENST00000486556.1|TRADD|ENSG00000102871.11|TNFRSF1A-associated via death domain
hg19_v2_chr2_+_48010221_48010307	0.0440303	GLI2	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr12_+_48099858_48099877	0.04397	GLI2	ENST00000547799.1|RP1-197B17.3|ENSG00000257433.1|RP1-197B17.3
hg19_v2_chr6_-_34073743_34073761	0.0439066	GLI2	ENST00000609222.1|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr7_+_23145884_23145917	0.0438229	GLI2	ENST00000409689.1|KLHL7|ENSG00000122550.13|kelch-like family member 7 	ENST00000410047.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chrX_+_26156460_26156460	0.043718	GLI2	ENST00000325250.1|MAGEB18|ENSG00000176774.5|melanoma antigen family B, 18
hg19_v2_chr10_-_75910789_75910821	0.0435922	GLI2	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr11_+_14665373_14665380	0.0435874	GLI2	ENST00000455098.2|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr7_-_151107106_151107129	0.0435866	GLI2	ENST00000334493.6|WDR86|ENSG00000187260.11|WD repeat domain 86
hg19_v2_chr1_+_152881014_152881031	0.0435384	GLI2	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr11_+_57308979_57308979	0.043531	GLI2	ENST00000457912.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr11_-_64527425_64527461	0.0425896	GLI2	ENST00000377432.3|PYGM|ENSG00000068976.9|phosphorylase, glycogen, muscle
hg19_v2_chr19_+_40973049_40973126	0.0425884	GLI2	ENST00000598249.1|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000338932.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000344104.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4
hg19_v2_chr17_-_39538550_39538655	0.0423132	GLI2	ENST00000394001.1|KRT34|ENSG00000131737.5|keratin 34
hg19_v2_chr9_+_131218698_131218750	0.042283	GLI2	ENST00000434106.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000546203.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000446274.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000421776.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000432065.2|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr9_+_87285539_87285575	0.0422743	GLI2	ENST00000359847.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chrX_-_107334790_107334848	0.0420832	GLI2	ENST00000217958.3|PSMD10|ENSG00000101843.14|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10
hg19_v2_chr19_-_6502590_6502613	0.0418381	GLI2	ENST00000264071.2|TUBB4A|ENSG00000104833.6|tubulin, beta 4A class IVa
hg19_v2_chr4_-_84376953_84377040	0.0415225	GLI2	ENST00000510985.1|HELQ|ENSG00000163312.6|helicase, POLQ-like 	ENST00000295488.3|HELQ|ENSG00000163312.6|helicase, POLQ-like
hg19_v2_chr1_-_157108130_157108173	0.0414357	GLI2	ENST00000368192.4|ETV3|ENSG00000117036.7|ets variant 3
hg19_v2_chr7_+_150498610_150498659	0.0411841	GLI2	ENST00000461345.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr9_+_135754263_135754338	0.0410288	GLI2	ENST00000356311.5|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9 	ENST00000350499.6|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9
hg19_v2_chr1_+_21877753_21877788	0.0410196	GLI2	ENST00000374832.1|ALPL|ENSG00000162551.9|alkaline phosphatase, liver/bone/kidney
hg19_v2_chr10_+_104474207_104474297	0.0409142	GLI2	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr13_-_60738003_60738121	0.0407503	GLI2	ENST00000400330.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400324.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr19_-_55954230_55954230	0.0406987	GLI2	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr12_-_8814669_8814767	0.0405593	GLI2	ENST00000535411.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000540087.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr7_-_105319536_105319611	0.0405058	GLI2	ENST00000477775.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr7_+_99971068_99971128	0.0402989	GLI2	ENST00000198536.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000453419.1|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr16_+_28834531_28834588	0.040257	GLI2	ENST00000570200.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chr4_+_158142750_158142836	0.0402283	GLI2	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr2_+_219283815_219283853	0.0397204	GLI2	ENST00000248444.5|VIL1|ENSG00000127831.6|villin 1 	ENST00000454069.1|VIL1|ENSG00000127831.6|villin 1 	ENST00000392114.2|VIL1|ENSG00000127831.6|villin 1
hg19_v2_chr16_+_23194033_23194045	0.0396997	GLI2	ENST00000300061.2|SCNN1G|ENSG00000166828.2|sodium channel, non-voltage-gated 1, gamma subunit
hg19_v2_chr19_-_53758094_53758147	0.039514	GLI2	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr9_+_131218408_131218487	0.0393941	GLI2	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr17_-_6554877_6554954	0.0393923	GLI2	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr18_-_60987220_60987386	0.03931	GLI2	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_+_44215603_44215666	0.0392613	GLI2	ENST00000371554.1|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr5_-_132299313_132299334	0.0391403	GLI2	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr3_-_185542761_185542813	0.0390611	GLI2	ENST00000457616.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2 	ENST00000346192.3|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr19_+_17638059_17638113	0.0390286	GLI2	ENST00000599164.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000449408.2|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000600871.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000599124.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr17_+_12569306_12569344	0.0389119	GLI2	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr19_-_35625765_35625776	0.0388577	GLI2	ENST00000591633.1|LGI4|ENSG00000153902.9|leucine-rich repeat LGI family, member 4
hg19_v2_chr16_+_71660079_71660102	0.0383501	GLI2	ENST00000565261.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000268485.3|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000299952.4|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr7_-_73153178_73153197	0.0382519	GLI2	ENST00000437775.2|ABHD11|ENSG00000106077.14|abhydrolase domain containing 11 	ENST00000222800.3|ABHD11|ENSG00000106077.14|abhydrolase domain containing 11
hg19_v2_chr12_-_110888103_110888212	0.0382241	GLI2	ENST00000426440.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa 	ENST00000228825.7|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr12_-_56101647_56101699	0.0382206	GLI2	ENST00000347027.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257879.6|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000257880.7|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394230.2|ITGA7|ENSG00000135424.11|integrin, alpha 7 	ENST00000394229.2|ITGA7|ENSG00000135424.11|integrin, alpha 7
hg19_v2_chr19_+_45281118_45281181	0.0381914	GLI2	ENST00000270279.3|CBLC|ENSG00000142273.6|Cbl proto-oncogene C, E3 ubiquitin protein ligase 	ENST00000341505.4|CBLC|ENSG00000142273.6|Cbl proto-oncogene C, E3 ubiquitin protein ligase
hg19_v2_chr2_+_48010312_48010328	0.0380441	GLI2	ENST00000540021.1|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr6_-_20212630_20212726	0.0377849	GLI2	ENST00000324607.7|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000541730.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000536798.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1
hg19_v2_chr20_-_58508702_58508728	0.0375726	GLI2	ENST00000357552.3|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2 	ENST00000425931.1|SYCP2|ENSG00000196074.8|synaptonemal complex protein 2
hg19_v2_chr12_-_122018346_122018389	0.0374828	GLI2	ENST00000377069.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr22_-_19419205_19419280	0.0373799	GLI2	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr12_+_120740119_120740124	0.0370468	GLI2	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr16_-_4817129_4817219	0.0368729	GLI2	ENST00000545009.1|ZNF500|ENSG00000103199.9|zinc finger protein 500 	ENST00000219478.6|ZNF500|ENSG00000103199.9|zinc finger protein 500
hg19_v2_chr9_+_135937365_135937365	0.0367964	GLI2	ENST00000372080.4|CEL|ENSG00000170835.10|carboxyl ester lipase 	ENST00000351304.7|CEL|ENSG00000170835.10|carboxyl ester lipase
hg19_v2_chr1_+_33546714_33546769	0.036716	GLI2	ENST00000294517.6|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000358680.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000373443.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000398167.1|ADC|ENSG00000142920.12|arginine decarboxylase
hg19_v2_chr7_-_141401951_141401985	0.0366381	GLI2	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr11_+_13690200_13690244	0.0365951	GLI2	ENST00000354817.3|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr19_+_18794470_18794512	0.0365555	GLI2	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chrX_+_107334895_107334934	0.0364431	GLI2	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr19_+_17858509_17858529	0.0360991	GLI2	ENST00000594202.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000252771.7|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000389133.4|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr11_-_65430251_65430399	0.0359207	GLI2	ENST00000534283.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000527749.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000533187.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000525693.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000534558.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532879.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A 	ENST00000532999.1|RELA|ENSG00000173039.14|v-rel avian reticuloendotheliosis viral oncogene homolog A
hg19_v2_chr15_-_49447771_49447822	0.0358428	GLI2	ENST00000558843.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000542928.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000561248.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr19_+_7069690_7069726	0.0355986	GLI2	ENST00000439035.2|ZNF557|ENSG00000130544.7|zinc finger protein 557
hg19_v2_chr17_-_73851285_73851501	0.0355168	GLI2	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr20_-_9819674_9819728	0.0354124	GLI2	ENST00000378429.3|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr22_+_39410287_39410368	0.0352275	GLI2	ENST00000381568.4|APOBEC3D|ENSG00000243811.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
hg19_v2_chr14_-_105262016_105262054	0.035208	GLI2	ENST00000407796.2|AKT1|ENSG00000142208.11|v-akt murine thymoma viral oncogene homolog 1
hg19_v2_chr20_-_896960_896978	0.0350922	GLI2	ENST00000381922.3|ANGPT4|ENSG00000101280.6|angiopoietin 4 	ENST00000546022.1|ANGPT4|ENSG00000101280.6|angiopoietin 4
hg19_v2_chr17_-_26684473_26684571	0.0347646	GLI2	ENST00000540200.1|POLDIP2|ENSG00000004142.7|polymerase (DNA-directed), delta interacting protein 2
hg19_v2_chr1_-_47407111_47407128	0.0347168	GLI2	ENST00000371904.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr15_-_63449663_63449698	0.0343646	GLI2	ENST00000439025.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr3_-_50336278_50336323	0.0343259	GLI2	ENST00000359051.3|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000417393.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000442620.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000452674.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related)
hg19_v2_chr5_-_141060389_141060439	0.0343067	GLI2	ENST00000504448.1|ARAP3|ENSG00000120318.11|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
hg19_v2_chr14_+_74417192_74417227	0.0342641	GLI2	ENST00000554320.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr19_-_16284286_16284336	0.0338354	GLI2	ENST00000379859.3|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3 	ENST00000269878.4|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3
hg19_v2_chr19_+_35820064_35820115	0.0337919	GLI2	ENST00000341773.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600131.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000270311.6|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000595780.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000597916.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000593867.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000600424.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000599811.1|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000536635.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000085219.5|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000544992.2|CD22|ENSG00000012124.10|CD22 molecule 	ENST00000419549.2|CD22|ENSG00000012124.10|CD22 molecule
hg19_v2_chr19_+_19144384_19144473	0.0337662	GLI2	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chrX_+_23685653_23685681	0.0337627	GLI2	ENST00000379331.3|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr9_+_117085336_117085377	0.0334125	GLI2	ENST00000259396.8|ORM1|ENSG00000229314.4|orosomucoid 1 	ENST00000538816.1|ORM1|ENSG00000229314.4|orosomucoid 1
hg19_v2_chr3_-_52868931_52869042	0.033384	GLI2	ENST00000486659.1|MUSTN1|ENSG00000272573.1|musculoskeletal, embryonic nuclear protein 1
hg19_v2_chr16_-_4897266_4897343	0.0332608	GLI2	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v2_chr15_-_27018884_27018935	0.0331929	GLI2	ENST00000299267.4|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr9_+_139743176_139743256	0.0330644	GLI2	ENST00000371661.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1 	ENST00000545326.1|PHPT1|ENSG00000054148.13|phosphohistidine phosphatase 1
hg19_v2_chr16_-_89556942_89557020	0.0329584	GLI2	ENST00000301030.4|ANKRD11|ENSG00000167522.10|ankyrin repeat domain 11
hg19_v2_chr9_+_132427883_132427951	0.0329464	GLI2	ENST00000372469.4|PRRX2|ENSG00000167157.9|paired related homeobox 2
hg19_v2_chr16_+_75252878_75252898	0.0329067	GLI2	ENST00000361017.4|CTRB1|ENSG00000168925.6|chymotrypsinogen B1
hg19_v2_chr10_+_112327425_112327516	0.0328784	GLI2	ENST00000361804.4|SMC3|ENSG00000108055.9|structural maintenance of chromosomes 3
hg19_v2_chr16_+_30064444_30064528	0.0328143	GLI2	ENST00000395248.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000566897.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000568435.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr8_-_145060593_145060634	0.0327409	GLI2	ENST00000313059.5|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000524918.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000313028.7|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000525773.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10
hg19_v2_chr12_-_10282681_10282741	0.0321753	GLI2	ENST00000533022.1|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr17_+_26698677_26698732	0.0318774	GLI2	ENST00000457710.3|SARM1|ENSG00000004139.9|sterile alpha and TIR motif containing 1
hg19_v2_chr14_-_105262055_105262107	0.0318289	GLI2	ENST00000349310.3|AKT1|ENSG00000142208.11|v-akt murine thymoma viral oncogene homolog 1
hg19_v2_chr19_-_2256405_2256428	0.0317712	GLI2	ENST00000300961.6|JSRP1|ENSG00000167476.6|junctional sarcoplasmic reticulum protein 1
hg19_v2_chr9_-_139658965_139658975	0.0316983	GLI2	ENST00000316144.5|LCN15|ENSG00000177984.6|lipocalin 15
hg19_v2_chr1_-_229478714_229478815	0.0316796	GLI2	ENST00000284617.2|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr15_-_75918023_75918090	0.0313066	GLI2	ENST00000564644.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000371091.5|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000564675.1|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr20_+_2821340_2821365	0.0311593	GLI2	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr22_+_23248512_23248512	0.0310638	GLI2	ENST00000390325.2|IGLC3|ENSG00000211679.2|immunoglobulin lambda constant 3 (Kern-Oz+ marker)
hg19_v2_chr11_-_57103327_57103372	0.0310035	GLI2	ENST00000529002.1|SSRP1|ENSG00000149136.3|structure specific recognition protein 1 	ENST00000278412.2|SSRP1|ENSG00000149136.3|structure specific recognition protein 1
hg19_v2_chr1_-_26232951_26232959	0.0307983	GLI2	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr10_+_76970509_76970606	0.030533	GLI2	ENST00000332211.6|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000535553.1|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000313132.4|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2
hg19_v2_chr14_-_94759595_94759613	0.0303906	GLI2	ENST00000261994.4|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr16_+_610407_610429	0.0303327	GLI2	ENST00000409413.3|C16orf11|ENSG00000161992.5|chromosome 16 open reading frame 11
hg19_v2_chr10_+_75910960_75910989	0.0302719	GLI2	ENST00000539909.1|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000286621.2|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr11_-_6640585_6640692	0.0302467	GLI2	ENST00000533371.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000528657.1|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000436873.2|TPP1|ENSG00000166340.10|tripeptidyl peptidase I 	ENST00000299427.6|TPP1|ENSG00000166340.10|tripeptidyl peptidase I
hg19_v2_chr4_-_168155730_168155740	0.0302289	GLI2	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr11_-_65686496_65686555	0.0300415	GLI2	ENST00000449692.3|C11orf68|ENSG00000175573.6|chromosome 11 open reading frame 68
hg19_v2_chr12_-_48744554_48744733	0.0300217	GLI2	ENST00000544117.2|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000548932.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000549125.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000301042.3|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000547026.1|ZNF641|ENSG00000167528.8|zinc finger protein 641
hg19_v2_chr16_+_55690205_55690352	0.029812	GLI2	ENST00000379906.2|SLC6A2|ENSG00000103546.14|solute carrier family 6 (neurotransmitter transporter), member 2
hg19_v2_chr3_+_184081137_184081155	0.029536	GLI2	ENST00000443489.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr2_+_201450591_201450680	0.0293667	GLI2	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr5_+_126112794_126112928	0.0290027	GLI2	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr7_-_111202511_111202573	0.0289474	GLI2	ENST00000452895.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000452753.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000331762.3|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr12_+_72148614_72148699	0.0287378	GLI2	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chrX_+_70364667_70364721	0.0287231	GLI2	ENST00000536169.1|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000395855.2|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000374051.3|NLGN3|ENSG00000196338.8|neuroligin 3 	ENST00000358741.3|NLGN3|ENSG00000196338.8|neuroligin 3
hg19_v2_chrX_-_104465358_104465358	0.028474	GLI2	ENST00000372578.3|TEX13A|ENSG00000133149.5|testis expressed 13A 	ENST00000372575.1|TEX13A|ENSG00000133149.5|testis expressed 13A 	ENST00000413579.1|TEX13A|ENSG00000133149.5|testis expressed 13A
hg19_v2_chr16_-_71843047_71843104	0.0284432	GLI2	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr22_+_29279552_29279586	0.0283283	GLI2	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr5_-_150284351_150284443	0.0282642	GLI2	ENST00000427179.1|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr10_-_127408011_127408135	0.0281944	GLI2	ENST00000531977.1|RP11-383C5.4|ENSG00000224023.6|RP11-383C5.4	ENST00000527483.1|RP11-383C5.4|ENSG00000224023.6|RP11-383C5.4	ENST00000525909.1|RP11-383C5.4|ENSG00000224023.6|RP11-383C5.4	ENST00000528844.1|RP11-383C5.4|ENSG00000224023.6|RP11-383C5.4	ENST00000423178.2|RP11-383C5.4|ENSG00000224023.6|RP11-383C5.4
hg19_v2_chrX_-_54384425_54384495	0.0278084	GLI2	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr2_+_178977143_178977211	0.0274451	GLI2	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chrX_+_19373700_19373845	0.0274107	GLI2	ENST00000379804.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr2_-_97304105_97304116	0.0273907	GLI2	ENST00000599854.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000441706.2|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr1_+_22964073_22964132	0.0272965	GLI2	ENST00000402322.1|C1QA|ENSG00000173372.12|complement component 1, q subcomponent, A chain
hg19_v2_chr6_+_44214824_44214841	0.0272644	GLI2	ENST00000371646.5|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1 	ENST00000353801.3|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr19_+_17638041_17638055	0.0272579	GLI2	ENST00000601861.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr19_-_43709817_43709926	0.0272076	GLI2	ENST00000433626.2|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4 	ENST00000405312.3|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr14_-_94759408_94759434	0.0270104	GLI2	ENST00000554723.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr15_-_75918109_75918156	0.0269842	GLI2	ENST00000567134.1|SNUPN|ENSG00000169371.9|snurportin 1 	ENST00000308588.5|SNUPN|ENSG00000169371.9|snurportin 1
hg19_v2_chr1_-_9131776_9131791	0.0269833	GLI2	ENST00000484798.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr13_+_115000521_115000536	0.0269717	GLI2	ENST00000252457.5|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375308.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr17_-_27038063_27038117	0.0268399	GLI2	ENST00000439862.3|PROCA1|ENSG00000167525.9|protein interacting with cyclin A1
hg19_v2_chr14_-_94759361_94759403	0.0268371	GLI2	ENST00000393096.1|SERPINA10|ENSG00000140093.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
hg19_v2_chr22_+_51176624_51176663	0.0266851	GLI2	ENST00000216139.5|ACR|ENSG00000100312.6|acrosin 	ENST00000529621.1|ACR|ENSG00000100312.6|acrosin
hg19_v2_chr2_-_241759622_241759725	0.0266713	GLI2	ENST00000320389.7|KIF1A|ENSG00000130294.10|kinesin family member 1A 	ENST00000498729.2|KIF1A|ENSG00000130294.10|kinesin family member 1A
hg19_v2_chr17_+_29248918_29248950	0.0266423	GLI2	ENST00000581548.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2 	ENST00000580525.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr17_-_4545170_4545230	0.0266022	GLI2	ENST00000576394.1|ALOX15|ENSG00000161905.8|arachidonate 15-lipoxygenase 	ENST00000574640.1|ALOX15|ENSG00000161905.8|arachidonate 15-lipoxygenase
hg19_v2_chr3_+_49591881_49591940	0.0265197	GLI2	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr5_-_150284532_150284549	0.0265104	GLI2	ENST00000394226.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000446148.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000274599.5|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000418587.2|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chrX_+_115567767_115567790	0.0259464	GLI2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr20_-_32891151_32891168	0.0258871	GLI2	ENST00000217426.2|AHCY|ENSG00000101444.8|adenosylhomocysteinase
hg19_v2_chr3_+_184032419_184032445	0.0256809	GLI2	ENST00000352767.3|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1 	ENST00000427141.2|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1
hg19_v2_chr1_+_225117350_225117409	0.0255174	GLI2	ENST00000413949.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000430092.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366850.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000400952.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366849.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr2_+_85132749_85132788	0.0253506	GLI2	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr17_+_73089382_73089451	0.0252976	GLI2	ENST00000538213.2|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5 	ENST00000584118.1|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5
hg19_v2_chr20_+_44637526_44637554	0.0252363	GLI2	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chrX_-_130037198_130037234	0.024976	GLI2	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr8_+_94929077_94929106	0.0247495	GLI2	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr19_-_49314169_49314194	0.0241551	GLI2	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr10_-_113943447_113943536	0.0241426	GLI2	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr1_+_36554470_36554519	0.0238363	GLI2	ENST00000373178.4|ADPRHL2|ENSG00000116863.10|ADP-ribosylhydrolase like 2
hg19_v2_chr10_-_112064665_112064737	0.0237691	GLI2	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr13_-_36871886_36872023	0.0235894	GLI2	ENST00000491049.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000503173.1|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000239860.6|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000379862.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000239859.7|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000379864.2|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000510088.1|CCDC169|ENSG00000242715.3|coiled-coil domain containing 169 	ENST00000554962.1|SOHLH2|ENSG00000120669.11|spermatogenesis and oogenesis specific basic helix-loop-helix 2 	ENST00000511166.1|CCDC169-SOHLH2|ENSG00000250709.1|CCDC169-SOHLH2 readthrough
hg19_v2_chr22_-_37608325_37608362	0.0235274	GLI2	ENST00000328544.3|SSTR3|ENSG00000183473.5|somatostatin receptor 3
hg19_v2_chrX_+_23682379_23682401	0.0235181	GLI2	ENST00000379349.1|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr15_+_90792760_90792767	0.0235027	GLI2	ENST00000339615.5|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13 	ENST00000438251.1|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13
hg19_v2_chr1_-_112531777_112531801	0.0234796	GLI2	ENST00000315987.2|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3 	ENST00000302127.4|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3
hg19_v2_chr19_+_57946684_57946723	0.0231991	GLI2	ENST00000334181.4|ZNF749|ENSG00000186230.6|zinc finger protein 749 	ENST00000415248.1|ZNF749|ENSG00000186230.6|zinc finger protein 749
hg19_v2_chr1_+_207669573_207669606	0.0223486	GLI2	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr16_+_30064411_30064428	0.0219975	GLI2	ENST00000338110.5|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chrX_-_134305322_134305322	0.02193	GLI2	ENST00000276241.6|CXorf48|ENSG00000169551.8|cancer/testis antigen 55 	ENST00000344129.2|CXorf48|ENSG00000169551.8|cancer/testis antigen 55
hg19_v2_chr8_+_94929168_94929235	0.0216866	GLI2	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr2_-_97304009_97304074	0.0214944	GLI2	ENST00000431828.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000435669.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000440133.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3 	ENST00000448075.1|KANSL3|ENSG00000114982.13|KAT8 regulatory NSL complex subunit 3
hg19_v2_chr5_-_178054014_178054096	0.021312	GLI2	ENST00000520957.1|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chr16_-_67997947_67997968	0.0212482	GLI2	ENST00000537830.2|SLC12A4|ENSG00000124067.12|solute carrier family 12 (potassium/chloride transporter), member 4
hg19_v2_chr13_+_115000384_115000458	0.0212236	GLI2	ENST00000356221.3|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375310.1|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr5_-_156569754_156569786	0.0212067	GLI2	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr13_+_114145310_114145436	0.0210784	GLI2	ENST00000434316.2|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3 	ENST00000375391.1|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3
hg19_v2_chr9_-_98079965_98080008	0.0206723	GLI2	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr20_+_61867235_61867246	0.0206428	GLI2	ENST00000342412.6|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7 	ENST00000217169.3|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7
hg19_v2_chr17_-_39203519_39203568	0.0205262	GLI2	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr12_-_48099754_48099769	0.0203328	GLI2	ENST00000380650.4|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chr8_-_41655107_41655159	0.0202447	GLI2	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr6_-_121655552_121655592	0.0202378	GLI2	ENST00000275159.6|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr1_-_153522562_153522612	0.0201971	GLI2	ENST00000368714.1|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr1_-_229478236_229478308	0.0200903	GLI2	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr7_+_99971129_99971167	0.0200081	GLI2	ENST00000394000.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000350573.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr14_-_51561784_51561854	0.0199464	GLI2	ENST00000360392.4|TRIM9|ENSG00000100505.9|tripartite motif containing 9
hg19_v2_chr1_+_86934526_86934578	0.0195473	GLI2	ENST00000394711.1|CLCA1|ENSG00000016490.11|chloride channel accessory 1
hg19_v2_chr19_-_49314269_49314293	0.0193183	GLI2	ENST00000545387.2|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000316273.6|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000402551.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000598162.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000599246.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr12_-_90024360_90024531	0.0192947	GLI2	ENST00000393164.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr8_+_7705398_7705621	0.0191976	GLI2	ENST00000400125.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000434307.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000326558.5|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000351436.4|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000528033.1|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A
hg19_v2_chr5_+_80597453_80597475	0.0191039	GLI2	ENST00000438268.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr2_+_223536428_223536505	0.0190804	GLI2	ENST00000446656.3|MOGAT1|ENSG00000124003.9|monoacylglycerol O-acyltransferase 1
hg19_v2_chr2_-_71047727_71047733	0.0190574	GLI2	ENST00000272367.2|CLEC4F|ENSG00000152672.3|C-type lectin domain family 4, member F
hg19_v2_chr10_+_133918175_133918175	0.0188403	GLI2	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr20_+_33814457_33814506	0.0188375	GLI2	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr1_+_1950763_1950815	0.0186888	GLI2	ENST00000378585.4|GABRD|ENSG00000187730.6|gamma-aminobutyric acid (GABA) A receptor, delta
hg19_v2_chr16_-_75241050_75241083	0.0186609	GLI2	ENST00000303037.8|CTRB2|ENSG00000168928.8|chymotrypsinogen B2
hg19_v2_chr19_-_55791540_55791549	0.0185144	GLI2	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr22_+_29168652_29168770	0.0182072	GLI2	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr14_+_105147464_105147523	0.0179271	GLI2	ENST00000540171.2|RP11-982M15.6|ENSG00000256050.2|RP11-982M15.6
hg19_v2_chr19_+_49617609_49617681	0.0178062	GLI2	ENST00000221459.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans) 	ENST00000486217.2|LIN7B|ENSG00000104863.7|lin-7 homolog B (C. elegans)
hg19_v2_chr1_+_156756667_156756721	0.0176511	GLI2	ENST00000526188.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated) 	ENST00000454659.1|PRCC|ENSG00000143294.10|papillary renal cell carcinoma (translocation-associated)
hg19_v2_chr1_-_9132311_9132325	0.0175602	GLI2	ENST00000474145.1|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr14_+_78870030_78870098	0.0175258	GLI2	ENST00000553631.1|NRXN3|ENSG00000021645.13|neurexin 3 	ENST00000554719.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr10_-_38265517_38265591	0.0175214	GLI2	ENST00000302609.7|ZNF25|ENSG00000175395.11|zinc finger protein 25
hg19_v2_chr10_-_43904235_43904330	0.017492	GLI2	ENST00000356053.3|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr14_+_50359773_50359850	0.0174436	GLI2	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr3_-_27410847_27410951	0.0172568	GLI2	ENST00000429845.2|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000341435.5|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000435750.1|NEK10|ENSG00000163491.12|NIMA-related kinase 10
hg19_v2_chr16_-_84538218_84538364	0.0171937	GLI2	ENST00000562447.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000565765.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000535580.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000343629.6|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1
hg19_v2_chr19_-_45873642_45873876	0.0171466	GLI2	ENST00000485403.2|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586856.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000586131.1|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391940.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000221481.6|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391944.3|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2 	ENST00000391945.4|ERCC2|ENSG00000104884.10|excision repair cross-complementing rodent repair deficiency, complementation group 2
hg19_v2_chr1_+_27114589_27114712	0.0170959	GLI2	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr9_+_33817461_33817565	0.0167758	GLI2	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr18_+_21269404_21269427	0.0165508	GLI2	ENST00000313654.9|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr7_+_64363625_64363667	0.0164873	GLI2	ENST00000476120.1|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000319636.5|ZNF273|ENSG00000198039.7|zinc finger protein 273 	ENST00000545510.1|ZNF273|ENSG00000198039.7|zinc finger protein 273
hg19_v2_chr17_-_42298201_42298284	0.0164441	GLI2	ENST00000527034.1|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr17_+_33288549_33288598	0.0161497	GLI2	ENST00000361952.3|ZNF830|ENSG00000198783.4|zinc finger protein 830
hg19_v2_chr3_+_16926441_16926463	0.016124	GLI2	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr10_+_72238517_72238595	0.0159086	GLI2	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr16_+_10479906_10479925	0.0158547	GLI2	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr5_+_150226085_150226085	0.0157804	GLI2	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr5_+_140180635_140180783	0.0157636	GLI2	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr16_+_2079501_2079528	0.015642	GLI2	ENST00000563587.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr17_+_76164639_76164699	0.0154595	GLI2	ENST00000225777.3|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000585591.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000589711.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000588282.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2 	ENST00000589168.1|SYNGR2|ENSG00000108639.3|synaptogyrin 2
hg19_v2_chr19_-_12941215_12941230	0.0154266	GLI2	ENST00000458671.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr12_-_82152444_82152475	0.0153888	GLI2	ENST00000549325.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000550584.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr16_-_18801582_18801630	0.0151747	GLI2	ENST00000565420.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr7_+_150498783_150498890	0.0149329	GLI2	ENST00000475536.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A 	ENST00000468689.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr19_+_16338416_16338504	0.0148816	GLI2	ENST00000586543.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chrX_-_106960285_106960365	0.0147424	GLI2	ENST00000503515.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372397.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr10_-_94333784_94333860	0.0145747	GLI2	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr3_-_197476560_197476577	0.0144787	GLI2	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr6_+_116892641_116892726	0.0143944	GLI2	ENST00000487832.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000518117.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr10_+_127512106_127512130	0.0142911	GLI2	ENST00000278100.6|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000299130.3|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000368759.5|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000429863.2|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein
hg19_v2_chr17_-_30185946_30185970	0.0141038	GLI2	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr11_+_95523823_95523845	0.0140942	GLI2	ENST00000538658.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr19_-_6481776_6481819	0.0140696	GLI2	ENST00000543576.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000590173.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000381480.2|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C
hg19_v2_chrX_-_102348017_102348157	0.0137217	GLI2	ENST00000425644.1|NXF3|ENSG00000147206.12|nuclear RNA export factor 3 	ENST00000395065.3|NXF3|ENSG00000147206.12|nuclear RNA export factor 3 	ENST00000425463.2|NXF3|ENSG00000147206.12|nuclear RNA export factor 3
hg19_v2_chr15_-_72490114_72490145	0.0136951	GLI2	ENST00000309731.7|GRAMD2|ENSG00000175318.7|GRAM domain containing 2
hg19_v2_chr19_-_13030071_13030115	0.0136772	GLI2	ENST00000293695.7|SYCE2|ENSG00000161860.7|synaptonemal complex central element protein 2
hg19_v2_chr20_+_32782375_32782385	0.0134937	GLI2	ENST00000568305.1|ASIP|ENSG00000101440.5|agouti signaling protein
hg19_v2_chr22_+_23243156_23243156	0.0134393	GLI2	ENST00000390323.2|IGLC2|ENSG00000211677.2|immunoglobulin lambda constant 2 (Kern-Oz- marker)
hg19_v2_chr5_-_850676_850720	0.0133833	GLI2	ENST00000424784.2|ZDHHC11|ENSG00000188818.8|zinc finger, DHHC-type containing 11
hg19_v2_chr1_+_171060018_171060060	0.01309	GLI2	ENST00000367755.4|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000392085.2|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000542847.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000538429.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000479749.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3
hg19_v2_chr14_+_64932210_64932226	0.0130614	GLI2	ENST00000394718.4|AKAP5|ENSG00000179841.8|A kinase (PRKA) anchor protein 5
hg19_v2_chr19_-_55791431_55791508	0.0130539	GLI2	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_+_50059125_50059180	0.0130087	GLI2	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr19_+_47105309_47105329	0.0129602	GLI2	ENST00000599839.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000596362.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr4_+_155702496_155702657	0.0128608	GLI2	ENST00000510397.1|RBM46|ENSG00000151962.3|RNA binding motif protein 46
hg19_v2_chr6_+_88182643_88182722	0.0128355	GLI2	ENST00000369556.3|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000544441.1|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369552.4|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1 	ENST00000369557.5|SLC35A1|ENSG00000164414.12|solute carrier family 35 (CMP-sialic acid transporter), member A1
hg19_v2_chr6_-_33756867_33756950	0.0127588	GLI2	ENST00000293760.5|LEMD2|ENSG00000161904.7|LEM domain containing 2
hg19_v2_chr1_-_85040090_85040168	0.0127064	GLI2	ENST00000370630.5|CTBS|ENSG00000117151.8|chitobiase, di-N-acetyl-
hg19_v2_chr12_-_108991812_108991924	0.0126522	GLI2	ENST00000392806.3|TMEM119|ENSG00000183160.8|transmembrane protein 119 	ENST00000547567.1|TMEM119|ENSG00000183160.8|transmembrane protein 119
hg19_v2_chr19_+_17858547_17858582	0.0125891	GLI2	ENST00000600676.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000600209.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596309.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598539.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000597474.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593385.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598067.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593833.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr18_+_11752040_11752117	0.0125367	GLI2	ENST00000423027.3|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr12_+_57388230_57388282	0.0123442	GLI2	ENST00000300098.1|GPR182|ENSG00000166856.1|G protein-coupled receptor 182
hg19_v2_chr10_-_101989315_101989376	0.0122821	GLI2	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr14_-_36990354_36990397	0.0121129	GLI2	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chrX_+_135618258_135618354	0.0120508	GLI2	ENST00000440515.1|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila) 	ENST00000456412.1|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila)
hg19_v2_chr2_+_26467762_26467817	0.01196	GLI2	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr17_+_58677539_58677610	0.011936	GLI2	ENST00000305921.3|PPM1D|ENSG00000170836.7|protein phosphatase, Mg2+/Mn2+ dependent, 1D
hg19_v2_chr8_-_67525473_67525518	0.0118544	GLI2	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr12_-_56122426_56122458	0.0117147	GLI2	ENST00000551173.1|CD63|ENSG00000135404.7|CD63 molecule
hg19_v2_chrX_-_120090454_120090454	0.0116913	GLI2	ENST00000434883.2|CT47A7|ENSG00000228517.2|cancer/testis antigen family 47, member A7
hg19_v2_chr3_-_88108212_88108223	0.0115904	GLI2	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr22_-_43040515_43040645	0.0114238	GLI2	ENST00000361740.4|CYB5R3|ENSG00000100243.16|cytochrome b5 reductase 3
hg19_v2_chr3_+_11314099_11314122	0.01142	GLI2	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr17_-_7137582_7137637	0.0112794	GLI2	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr7_-_73668692_73668774	0.0110779	GLI2	ENST00000352131.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa 	ENST00000055077.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa
hg19_v2_chr17_-_7307358_7307456	0.0109721	GLI2	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr14_-_23058063_23058175	0.0109207	GLI2	ENST00000538631.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000543337.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000250498.4|DAD1|ENSG00000129562.6|defender against cell death 1
hg19_v2_chr11_-_8986474_8986558	0.010853	GLI2	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr1_+_27114418_27114518	0.0107064	GLI2	ENST00000078527.4|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr5_-_179050066_179050170	0.010614	GLI2	ENST00000329433.6|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510411.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr19_+_56989485_56989565	0.0104643	GLI2	ENST00000585445.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000586091.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000594783.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000592146.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000588158.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000299997.4|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000591797.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr20_+_57466461_57466482	0.0103987	GLI2	ENST00000306090.10|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr13_+_100258907_100258953	0.0103771	GLI2	ENST00000376355.3|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376360.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000444838.2|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000376354.1|CLYBL|ENSG00000125246.11|citrate lyase beta like 	ENST00000339105.4|CLYBL|ENSG00000125246.11|citrate lyase beta like
hg19_v2_chr22_-_41258074_41258130	0.0103164	GLI2	ENST00000307221.4|DNAJB7|ENSG00000172404.4|DnaJ (Hsp40) homolog, subfamily B, member 7
hg19_v2_chr3_+_133118839_133118925	0.0099699	GLI2	ENST00000302334.2|BFSP2|ENSG00000170819.4|beaded filament structural protein 2, phakinin
hg19_v2_chr2_+_26467825_26467847	0.00994822	GLI2	ENST00000545822.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000425035.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr13_+_115000339_115000380	0.00954012	GLI2	ENST00000360383.3|CDC16|ENSG00000130177.10|cell division cycle 16 	ENST00000375312.3|CDC16|ENSG00000130177.10|cell division cycle 16
hg19_v2_chr19_-_49540073_49540152	0.00945692	GLI2	ENST00000301407.7|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1 	ENST00000604577.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000591656.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000601167.1|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1
hg19_v2_chr17_-_7155274_7155400	0.00920151	GLI2	ENST00000318988.6|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1 	ENST00000575783.1|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1 	ENST00000573600.1|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1
hg19_v2_chr5_-_89825328_89825422	0.00906221	GLI2	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr16_-_69368774_69368774	0.00891096	GLI2	ENST00000562949.1|RP11-343C2.12|ENSG00000272617.1|Conserved oligomeric Golgi complex subunit 8
hg19_v2_chr6_+_142468361_142468382	0.00886675	GLI2	ENST00000367630.4|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr17_+_80009741_80009834	0.00856261	GLI2	ENST00000578552.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000320548.4|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581578.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583885.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583641.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581418.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000355130.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000306823.6|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000392358.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr13_-_114103443_114103592	0.00846555	GLI2	ENST00000356501.4|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1 	ENST00000413169.2|ADPRHL1|ENSG00000153531.8|ADP-ribosylhydrolase like 1
hg19_v2_chr1_-_20834586_20834656	0.0083532	GLI2	ENST00000264198.3|MUL1|ENSG00000090432.5|mitochondrial E3 ubiquitin protein ligase 1
hg19_v2_chr11_-_113345842_113345994	0.00830538	GLI2	ENST00000346454.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr7_-_4923259_4923310	0.00829691	GLI2	ENST00000536091.1|RADIL|ENSG00000157927.12|Ras association and DIL domains
hg19_v2_chr19_-_51472031_51472047	0.00827377	GLI2	ENST00000391808.1|KLK6|ENSG00000167755.9|kallikrein-related peptidase 6
hg19_v2_chr10_+_32735030_32735110	0.008257	GLI2	ENST00000277657.6|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7 	ENST00000362006.5|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr2_+_233390863_233390878	0.0082452	GLI2	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chrX_-_52546189_52546197	0.0081539	GLI2	ENST00000375570.1|XAGE1E|ENSG00000204375.5|X antigen family, member 1E 	ENST00000429372.2|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr11_+_17741111_17741124	0.00805891	GLI2	ENST00000250003.3|MYOD1|ENSG00000129152.3|myogenic differentiation 1
hg19_v2_chr1_+_150521876_150521901	0.00805782	GLI2	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr17_-_62050278_62050278	0.00801593	GLI2	ENST00000578147.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit 	ENST00000435607.1|SCN4A|ENSG00000007314.7|sodium channel, voltage-gated, type IV, alpha subunit
hg19_v2_chr9_-_116061476_116061476	0.00781312	GLI2	ENST00000441031.3|RNF183|ENSG00000165188.9|ring finger protein 183
hg19_v2_chr17_-_7297519_7297593	0.00766707	GLI2	ENST00000576362.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000571078.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr1_-_182369751_182369777	0.00754463	GLI2	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr14_-_55369525_55369570	0.00736741	GLI2	ENST00000543643.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000536224.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000395514.1|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000491895.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1
hg19_v2_chr1_-_110283138_110283138	0.00720903	GLI2	ENST00000256594.3|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr7_+_128349106_128349128	0.00704156	GLI2	ENST00000485070.1|FAM71F1|ENSG00000135248.11|family with sequence similarity 71, member F1
hg19_v2_chr4_+_81951957_81952119	0.00657339	GLI2	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr11_-_73720276_73720286	0.00657072	GLI2	ENST00000348534.4|UCP3|ENSG00000175564.8|uncoupling protein 3 (mitochondrial, proton carrier)
hg19_v2_chr1_-_1141927_1141985	0.00651504	GLI2	ENST00000328596.6|TNFRSF18|ENSG00000186891.9|tumor necrosis factor receptor superfamily, member 18 	ENST00000379265.5|TNFRSF18|ENSG00000186891.9|tumor necrosis factor receptor superfamily, member 18
hg19_v2_chr19_+_46806856_46806883	0.00647921	GLI2	ENST00000300862.3|HIF3A|ENSG00000124440.11|hypoxia inducible factor 3, alpha subunit
hg19_v2_chr10_+_124030819_124030827	0.00646833	GLI2	ENST00000260723.4|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16 	ENST00000368994.2|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16
hg19_v2_chr19_+_41117770_41117817	0.00644705	GLI2	ENST00000601032.1|LTBP4|ENSG00000090006.13|latent transforming growth factor beta binding protein 4
hg19_v2_chr1_+_207226574_207226656	0.00636194	GLI2	ENST00000367080.3|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENST00000367079.2|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
hg19_v2_chr17_+_40761660_40761748	0.00629151	GLI2	ENST00000251413.3|TUBG1|ENSG00000131462.3|tubulin, gamma 1 	ENST00000591509.1|TUBG1|ENSG00000131462.3|tubulin, gamma 1
hg19_v2_chr14_+_22309368_22309422	0.0062169	GLI2	ENST00000390433.1|TRAV12-1|ENSG00000211785.1|T cell receptor alpha variable 12-1
hg19_v2_chr16_+_86229728_86229787	0.00619469	GLI2	ENST00000601250.1|LINC01082|ENSG00000269186.1|long intergenic non-protein coding RNA 1082
hg19_v2_chrX_+_52511761_52511769	0.00603088	GLI2	ENST00000399795.3|XAGE1C|ENSG00000183461.12|X antigen family, member 1C 	ENST00000375589.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr20_+_36974759_36974892	0.00602463	GLI2	ENST00000217407.2|LBP|ENSG00000129988.5|lipopolysaccharide binding protein
hg19_v2_chr11_+_2482661_2482675	0.00584979	GLI2	ENST00000335475.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr10_-_49459800_49459841	0.00584371	GLI2	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr14_+_85996471_85996497	0.00569101	GLI2	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr11_+_69931519_69931528	0.00539604	GLI2	ENST00000316296.5|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel 	ENST00000530676.1|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr17_-_9929581_9929626	0.0053776	GLI2	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr11_+_61735266_61735453	0.00520109	GLI2	ENST00000601917.1|AP003733.1|ENSG00000269089.1|Uncharacterized protein; cDNA FLJ36460 fis, clone THYMU2014801
hg19_v2_chr11_+_76777979_76778027	0.00513658	GLI2	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr20_+_18568537_18568585	0.00513476	GLI2	ENST00000377452.3|DTD1|ENSG00000125821.7|D-tyrosyl-tRNA deacylase 1
hg19_v2_chr11_+_66059339_66059348	0.0050813	GLI2	ENST00000327259.4|TMEM151A|ENSG00000179292.4|transmembrane protein 151A
hg19_v2_chrX_-_52260355_52260363	0.00454555	GLI2	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr11_-_8985927_8986008	0.00441511	GLI2	ENST00000528117.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B 	ENST00000309134.5|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr11_+_95523621_95523710	0.00440771	GLI2	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr7_-_112430427_112430478	0.00435311	GLI2	ENST00000449743.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000441474.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000454074.1|TMEM168|ENSG00000146802.8|transmembrane protein 168 	ENST00000447395.1|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr20_-_45318230_45318418	0.00424182	GLI2	ENST00000372114.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr6_+_147091575_147091715	0.00398459	GLI2	ENST00000326916.8|ADGB|ENSG00000118492.12|androglobin 	ENST00000470716.2|ADGB|ENSG00000118492.12|androglobin 	ENST00000367488.1|ADGB|ENSG00000118492.12|androglobin
hg19_v2_chr15_-_39486510_39486531	0.00385484	GLI2	ENST00000560743.1|RP11-265N7.1|ENSG00000259450.1|RP11-265N7.1
hg19_v2_chr1_-_200379180_200379191	0.00369715	GLI2	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr12_-_82153087_82153138	0.00366864	GLI2	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr22_+_41258250_41258269	0.00354852	GLI2	ENST00000544094.1|XPNPEP3|ENSG00000196236.8|X-prolyl aminopeptidase (aminopeptidase P) 3, putative
hg19_v2_chr17_+_6899366_6899384	0.00347532	GLI2	ENST00000251535.6|ALOX12|ENSG00000108839.7|arachidonate 12-lipoxygenase
hg19_v2_chr19_-_39466396_39466550	0.00343365	GLI2	ENST00000292852.4|FBXO17|ENSG00000269190.1|F-box protein 17
hg19_v2_chr16_+_72088376_72088537	0.00340347	GLI2	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr19_-_55791563_55791749	0.00337853	GLI2	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr14_-_94854926_94855002	0.00317597	GLI2	ENST00000402629.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000556091.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000554720.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr17_-_73761222_73761317	0.00301777	GLI2	ENST00000437911.1|GALK1|ENSG00000108479.7|galactokinase 1 	ENST00000225614.2|GALK1|ENSG00000108479.7|galactokinase 1
hg19_v2_chr6_-_8064567_8064652	0.00291404	GLI2	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr15_-_49447835_49447858	0.00289137	GLI2	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr11_-_113346111_113346125	0.00288527	GLI2	ENST00000362072.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr9_+_93589734_93589770	0.00277673	GLI2	ENST00000375746.1|SYK|ENSG00000165025.10|spleen tyrosine kinase
hg19_v2_chr3_-_25824872_25824913	0.00276344	GLI2	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr17_-_17140436_17140510	0.00274426	GLI2	ENST00000285071.4|FLCN|ENSG00000154803.8|folliculin 	ENST00000389169.5|FLCN|ENSG00000154803.8|folliculin 	ENST00000417064.1|FLCN|ENSG00000154803.8|folliculin
hg19_v2_chr3_-_195538728_195538754	0.00267505	GLI2	ENST00000349607.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated 	ENST00000346145.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr1_-_26233423_26233482	0.00264263	GLI2	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr3_-_25824925_25825042	0.00226891	GLI2	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr17_+_46184911_46184951	0.00220583	GLI2	ENST00000580219.1|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000452859.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000393405.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000439357.2|SNX11|ENSG00000002919.10|sorting nexin 11 	ENST00000359238.2|SNX11|ENSG00000002919.10|sorting nexin 11
hg19_v2_chrX_-_52736211_52736239	0.00198711	GLI2	ENST00000336777.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2 	ENST00000337502.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2
hg19_v2_chr5_+_118407053_118407239	0.00163958	GLI2	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr3_+_127317066_127317066	0.00149501	GLI2	ENST00000265056.7|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr19_+_3708376_3708501	0.00144162	GLI2	ENST00000539908.2|TJP3|ENSG00000105289.10|tight junction protein 3
hg19_v2_chr5_-_131347583_131347870	0.00113136	GLI2	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr6_-_28367481_28367508	0.00102443	GLI2	ENST00000396827.3|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr1_+_210001309_210001411	0.000974289	GLI2	ENST00000491415.2|DIEXF|ENSG00000117597.13|digestive organ expansion factor homolog (zebrafish)
hg19_v2_chr19_+_58962971_58963014	0.000917564	GLI2	ENST00000336614.4|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000545523.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599194.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000598244.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599193.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000594214.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000391696.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B
hg19_v2_chr14_+_74416989_74417041	0.000843879	GLI2	ENST00000334571.2|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase 	ENST00000554920.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr11_+_46366918_46366992	0.000811022	GLI2	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr19_-_2702681_2702707	0.000749818	GLI2	ENST00000382159.3|GNG7|ENSG00000176533.8|guanine nucleotide binding protein (G protein), gamma 7
hg19_v2_chr9_+_136215044_136215086	0.000544743	GLI2	ENST00000323345.6|RPL7A|ENSG00000148303.12|ribosomal protein L7a
hg19_v2_chr10_-_116164239_116164268	0.000417102	GLI2	ENST00000419268.1|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2 	ENST00000304129.4|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2 	ENST00000545353.1|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2
hg19_v2_chr1_+_203097407_203097476	0.000234535	GLI2	ENST00000367235.1|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr9_+_139871948_139871968	0.000216463	GLI2	ENST00000224167.2|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000457950.1|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371625.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371623.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain)
hg19_v2_chr16_+_68119324_68119364	0.000115984	GLI2	ENST00000349223.5|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr9_-_139652678_139652699	5.34126e-06	GLI2	ENST00000371688.3|LCN8|ENSG00000204001.5|lipocalin 8
