hg19_v2_chr2_-_43453734_43453751	0.703109	GUAGUGU	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr21_-_44846999_44847017	0.423658	GUAGUGU	ENST00000270162.6|SIK1|ENSG00000142178.7|salt-inducible kinase 1
hg19_v2_chr6_-_30585009_30585028	0.380242	GUAGUGU	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr4_+_87856129_87856186	0.370296	GUAGUGU	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr14_-_31676964_31677017	0.360777	GUAGUGU	ENST00000553700.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr3_+_20081515_20081570	0.355177	GUAGUGU	ENST00000263754.4|KAT2B|ENSG00000114166.7|K(lysine) acetyltransferase 2B
hg19_v2_chr10_+_5726764_5726911	0.347208	GUAGUGU	ENST00000328090.5|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B 	ENST00000496681.1|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B
hg19_v2_chr17_-_8534067_8534088	0.342954	GUAGUGU	ENST00000360416.3|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle 	ENST00000269243.4|MYH10|ENSG00000133026.8|myosin, heavy chain 10, non-muscle
hg19_v2_chr9_-_80646374_80646374	0.3246	GUAGUGU	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr14_+_53019822_53019873	0.309579	GUAGUGU	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr10_-_81205373_81205429	0.301394	GUAGUGU	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chr1_+_94883931_94883980	0.28872	GUAGUGU	ENST00000394233.2|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3 	ENST00000454898.2|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3 	ENST00000536817.1|ABCD3|ENSG00000117528.7|ATP-binding cassette, sub-family D (ALD), member 3
hg19_v2_chr12_-_44200052_44200136	0.282003	GUAGUGU	ENST00000548315.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000552521.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546662.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000548403.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1 	ENST00000546506.1|TWF1|ENSG00000151239.9|twinfilin actin-binding protein 1
hg19_v2_chr4_+_144257915_144258009	0.271086	GUAGUGU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr10_-_65225722_65225755	0.266829	GUAGUGU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr9_-_14314066_14314075	0.257018	GUAGUGU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr17_+_47865917_47866068	0.253208	GUAGUGU	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr4_+_52709229_52709345	0.246792	GUAGUGU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr21_+_30671189_30671207	0.244896	GUAGUGU	ENST00000286800.3|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr8_-_28243934_28243993	0.243937	GUAGUGU	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr13_+_49550015_49550070	0.231054	GUAGUGU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr1_+_7831323_7831414	0.22022	GUAGUGU	ENST00000054666.6|VAMP3|ENSG00000049245.8|vesicle-associated membrane protein 3
hg19_v2_chr17_-_4806369_4806394	0.217781	GUAGUGU	ENST00000293780.4|CHRNE|ENSG00000108556.7|cholinergic receptor, nicotinic, epsilon (muscle)
hg19_v2_chr6_+_53659746_53659817	0.208367	GUAGUGU	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr1_-_184723942_184724047	0.204465	GUAGUGU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr14_+_57735614_57735629	0.196417	GUAGUGU	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr9_+_101867359_101867376	0.195015	GUAGUGU	ENST00000374994.4|TGFBR1|ENSG00000106799.8|transforming growth factor, beta receptor 1
hg19_v2_chr6_-_136610911_136610990	0.194752	GUAGUGU	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr4_-_102268628_102268693	0.192049	GUAGUGU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr19_+_16187085_16187119	0.183303	GUAGUGU	ENST00000300933.4|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr10_+_31608054_31608156	0.167775	GUAGUGU	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr7_-_123389104_123389161	0.167562	GUAGUGU	ENST00000223023.4|WASL|ENSG00000106299.7|Wiskott-Aldrich syndrome-like
hg19_v2_chr19_-_17356697_17356762	0.157518	GUAGUGU	ENST00000291442.3|NR2F6|ENSG00000160113.5|nuclear receptor subfamily 2, group F, member 6
hg19_v2_chr8_+_81397876_81397902	0.156726	GUAGUGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr20_-_30310336_30310400	0.156294	GUAGUGU	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr1_+_25071848_25071944	0.149869	GUAGUGU	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr16_-_4166186_4166186	0.144171	GUAGUGU	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr3_+_47422485_47422562	0.144135	GUAGUGU	ENST00000431726.1|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23 	ENST00000456221.1|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23 	ENST00000265562.4|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23
hg19_v2_chr17_-_8770956_8771027	0.138964	GUAGUGU	ENST00000311434.9|PIK3R6|ENSG00000174083.13|phosphoinositide-3-kinase, regulatory subunit 6
hg19_v2_chr5_+_95066823_95066879	0.137218	GUAGUGU	ENST00000506817.1|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3 	ENST00000379982.3|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3
hg19_v2_chr14_-_35182994_35183034	0.133563	GUAGUGU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr6_-_30712313_30712332	0.132863	GUAGUGU	ENST00000376377.2|IER3|ENSG00000137331.11|immediate early response 3 	ENST00000259874.5|IER3|ENSG00000137331.11|immediate early response 3
hg19_v2_chr9_-_27573392_27573451	0.131214	GUAGUGU	ENST00000380003.3|C9orf72|ENSG00000147894.10|chromosome 9 open reading frame 72
hg19_v2_chr4_+_113066552_113066563	0.131042	GUAGUGU	ENST00000309733.5|C4orf32|ENSG00000174749.5|chromosome 4 open reading frame 32
hg19_v2_chr3_+_187930719_187930729	0.130565	GUAGUGU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_+_66797687_66797884	0.128882	GUAGUGU	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chrX_-_41782249_41782287	0.126001	GUAGUGU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr1_-_226924980_226925159	0.125299	GUAGUGU	ENST00000272117.3|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B
hg19_v2_chr5_-_32444828_32444872	0.122752	GUAGUGU	ENST00000265069.8|ZFR|ENSG00000056097.11|zinc finger RNA binding protein
hg19_v2_chr14_+_65453432_65453465	0.122472	GUAGUGU	ENST00000246166.2|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta
hg19_v2_chr2_-_11484710_11484812	0.120227	GUAGUGU	ENST00000315872.6|ROCK2|ENSG00000134318.9|Rho-associated, coiled-coil containing protein kinase 2
hg19_v2_chr5_+_42423872_42424026	0.119617	GUAGUGU	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chr10_-_61666267_61666414	0.114104	GUAGUGU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr3_+_23986748_23986761	0.113849	GUAGUGU	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr12_+_8850471_8850534	0.113073	GUAGUGU	ENST00000535829.1|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B 	ENST00000357529.3|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B
hg19_v2_chr10_-_32345305_32345376	0.111174	GUAGUGU	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr3_+_128968437_128968505	0.107594	GUAGUGU	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chr21_-_39870339_39870443	0.10631	GUAGUGU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr1_+_214161272_214161322	0.105554	GUAGUGU	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr15_-_52821247_52821295	0.0982814	GUAGUGU	ENST00000399231.3|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin) 	ENST00000399233.2|MYO5A|ENSG00000197535.10|myosin VA (heavy chain 12, myoxin)
hg19_v2_chr19_-_11450249_11450350	0.0982532	GUAGUGU	ENST00000222120.3|RAB3D|ENSG00000105514.3|RAB3D, member RAS oncogene family
hg19_v2_chr1_-_91487013_91487070	0.0974672	GUAGUGU	ENST00000347275.5|ZNF644|ENSG00000122482.16|zinc finger protein 644 	ENST00000370440.1|ZNF644|ENSG00000122482.16|zinc finger protein 644
hg19_v2_chr11_+_12695944_12695989	0.096404	GUAGUGU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr9_-_16870704_16870841	0.093496	GUAGUGU	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr3_+_152552685_152552736	0.0933748	GUAGUGU	ENST00000305097.3|P2RY1|ENSG00000169860.4|purinergic receptor P2Y, G-protein coupled, 1
hg19_v2_chr16_-_18937726_18937776	0.0924061	GUAGUGU	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr5_-_53606396_53606431	0.0923568	GUAGUGU	ENST00000504924.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000507646.2|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000502271.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15
hg19_v2_chr5_-_39074479_39074515	0.0917859	GUAGUGU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr4_+_145567173_145567296	0.0915087	GUAGUGU	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr2_+_42396472_42396563	0.0903585	GUAGUGU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr6_+_34857019_34857117	0.0896862	GUAGUGU	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr2_+_9346892_9346948	0.0895113	GUAGUGU	ENST00000281419.3|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 	ENST00000315273.4|ASAP2|ENSG00000151693.5|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
hg19_v2_chr1_-_155942086_155942145	0.0893293	GUAGUGU	ENST00000368315.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr18_-_33647487_33647547	0.0888495	GUAGUGU	ENST00000590898.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000357384.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000319040.6|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000588737.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000399022.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A
hg19_v2_chr2_+_153191706_153191751	0.0875895	GUAGUGU	ENST00000288670.9|FMNL2|ENSG00000157827.15|formin-like 2
hg19_v2_chr10_+_63661053_63661079	0.0874015	GUAGUGU	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr12_-_117628333_117628339	0.0832829	GUAGUGU	ENST00000427718.2|FBXO21|ENSG00000135108.10|F-box protein 21
hg19_v2_chrX_-_134186144_134186228	0.082767	GUAGUGU	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr5_+_134181625_134181713	0.0821953	GUAGUGU	ENST00000394976.3|C5orf24|ENSG00000181904.8|chromosome 5 open reading frame 24
hg19_v2_chr20_-_5591626_5591677	0.0799688	GUAGUGU	ENST00000379019.4|GPCPD1|ENSG00000125772.8|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
hg19_v2_chr17_+_27717415_27717618	0.0783655	GUAGUGU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr11_+_57520715_57520776	0.0780332	GUAGUGU	ENST00000524630.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529919.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399039.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533189.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr6_-_88411911_88411928	0.0755491	GUAGUGU	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr2_-_39664405_39664453	0.0754482	GUAGUGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chrX_+_134166333_134166371	0.0747899	GUAGUGU	ENST00000257013.7|FAM127A|ENSG00000134590.9|family with sequence similarity 127, member A
hg19_v2_chr17_+_55333876_55333939	0.07407	GUAGUGU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr10_+_134351319_134351353	0.0728306	GUAGUGU	ENST00000368594.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa 	ENST00000368593.3|INPP5A|ENSG00000068383.14|inositol polyphosphate-5-phosphatase, 40kDa
hg19_v2_chrX_+_70316005_70316047	0.0720757	GUAGUGU	ENST00000374259.3|FOXO4|ENSG00000184481.12|forkhead box O4
hg19_v2_chr1_+_114472222_114472377	0.0704428	GUAGUGU	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chrX_+_44732757_44732860	0.0701197	GUAGUGU	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr11_-_76381781_76381798	0.066836	GUAGUGU	ENST00000260061.5|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32 	ENST00000404995.1|LRRC32|ENSG00000137507.7|leucine rich repeat containing 32
hg19_v2_chr8_+_61429416_61429502	0.0660659	GUAGUGU	ENST00000262646.7|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family 	ENST00000531289.1|RAB2A|ENSG00000104388.10|RAB2A, member RAS oncogene family
hg19_v2_chr10_-_11653753_11653806	0.06572	GUAGUGU	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chrX_+_37208521_37208539	0.0642345	GUAGUGU	ENST00000378628.4|PRRG1|ENSG00000130962.13|proline rich Gla (G-carboxyglutamic acid) 1
hg19_v2_chr18_-_23670546_23670605	0.0625758	GUAGUGU	ENST00000542743.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000545952.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000539849.1|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18 	ENST00000415083.2|SS18|ENSG00000141380.9|synovial sarcoma translocation, chromosome 18
hg19_v2_chr10_+_101292684_101292706	0.0622838	GUAGUGU	ENST00000344586.7|NKX2-3|ENSG00000119919.9|NK2 homeobox 3
hg19_v2_chr3_+_122513642_122513664	0.0608441	GUAGUGU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr13_-_31038370_31038509	0.0594522	GUAGUGU	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr5_+_112043186_112043225	0.0585234	GUAGUGU	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr18_+_67956135_67956144	0.0584565	GUAGUGU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr19_+_54694119_54694214	0.056012	GUAGUGU	ENST00000456872.1|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000302937.4|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit 	ENST00000429671.2|TSEN34|ENSG00000170892.6|TSEN34 tRNA splicing endonuclease subunit
hg19_v2_chr1_+_78245303_78245351	0.0528273	GUAGUGU	ENST00000370791.3|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A 	ENST00000443751.2|FAM73A|ENSG00000180488.10|family with sequence similarity 73, member A
hg19_v2_chr9_-_36400213_36400296	0.0528258	GUAGUGU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr20_+_8112824_8112925	0.052028	GUAGUGU	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr21_-_39288743_39288765	0.0502599	GUAGUGU	ENST00000609713.1|KCNJ6|ENSG00000157542.8|potassium inwardly-rectifying channel, subfamily J, member 6
hg19_v2_chr10_-_27529716_27529756	0.0479979	GUAGUGU	ENST00000375897.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5 	ENST00000396271.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr1_+_93913713_93913839	0.0477605	GUAGUGU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr20_-_45984401_45984514	0.0471942	GUAGUGU	ENST00000311275.7|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr6_-_33267101_33267170	0.0436478	GUAGUGU	ENST00000497454.1|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr1_-_204380919_204380953	0.0431875	GUAGUGU	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr11_+_120207787_120207962	0.0423493	GUAGUGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr12_+_14518598_14518663	0.0422947	GUAGUGU	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr15_+_66161871_66161893	0.041893	GUAGUGU	ENST00000569896.1|RAB11A|ENSG00000103769.5|RAB11A, member RAS oncogene family
hg19_v2_chr7_-_105752651_105752777	0.0414579	GUAGUGU	ENST00000470347.1|SYPL1|ENSG00000008282.3|synaptophysin-like 1 	ENST00000455385.2|SYPL1|ENSG00000008282.3|synaptophysin-like 1
hg19_v2_chr1_+_87170247_87170276	0.0410802	GUAGUGU	ENST00000370558.4|SH3GLB1|ENSG00000097033.10|SH3-domain GRB2-like endophilin B1
hg19_v2_chr1_-_179198702_179198741	0.0405194	GUAGUGU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr22_-_36236265_36236481	0.0400162	GUAGUGU	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr11_-_85780086_85780161	0.038329	GUAGUGU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr2_-_86948245_86948245	0.0380659	GUAGUGU	ENST00000439940.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000604011.1|RNF103-CHMP3|ENSG00000249884.4|RNF103-CHMP3 readthrough
hg19_v2_chr5_-_90679145_90679176	0.0378108	GUAGUGU	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr2_-_86790593_86790614	0.0375497	GUAGUGU	ENST00000263856.4|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000409225.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3
hg19_v2_chr12_+_110719032_110719113	0.0361541	GUAGUGU	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr17_+_2699697_2699776	0.0360903	GUAGUGU	ENST00000254695.8|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000366401.4|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2 	ENST00000542807.1|RAP1GAP2|ENSG00000132359.9|RAP1 GTPase activating protein 2
hg19_v2_chr6_-_132834184_132834337	0.0348967	GUAGUGU	ENST00000367941.2|STX7|ENSG00000079950.9|syntaxin 7 	ENST00000367937.4|STX7|ENSG00000079950.9|syntaxin 7
hg19_v2_chr11_-_796197_796361	0.0346271	GUAGUGU	ENST00000530360.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000528606.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000320230.5|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr1_-_86622421_86622460	0.0342629	GUAGUGU	ENST00000370571.2|COL24A1|ENSG00000171502.10|collagen, type XXIV, alpha 1
hg19_v2_chr14_+_65381079_65381212	0.0340536	GUAGUGU	ENST00000549115.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000607599.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000548752.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000359118.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000552002.2|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551947.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000551093.1|CHURC1|ENSG00000258289.3|churchill domain containing 1 	ENST00000542227.1|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000447296.2|FNTB|ENSG00000257365.3|farnesyltransferase, CAAX box, beta 	ENST00000549987.1|CHURC1-FNTB|ENSG00000125954.8|CHURC1-FNTB readthrough
hg19_v2_chr22_-_36784035_36784063	0.0328675	GUAGUGU	ENST00000216181.5|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr9_-_115095883_115095947	0.0326223	GUAGUGU	ENST00000450374.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374255.2|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000334318.6|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3 	ENST00000374257.1|PTBP3|ENSG00000119314.11|polypyrimidine tract binding protein 3
hg19_v2_chr17_-_4167142_4167281	0.0314466	GUAGUGU	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr16_+_28875126_28875195	0.0288558	GUAGUGU	ENST00000359285.5|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1 	ENST00000538342.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr11_+_126152954_126152999	0.0286649	GUAGUGU	ENST00000392679.1|TIRAP|ENSG00000150455.9|toll-interleukin 1 receptor (TIR) domain containing adaptor protein
hg19_v2_chr16_+_640055_640118	0.0283154	GUAGUGU	ENST00000568586.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000538492.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000248139.3|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chr16_-_87525651_87525651	0.0267899	GUAGUGU	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr15_+_38544476_38544574	0.0266513	GUAGUGU	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr3_-_52931557_52931623	0.0265483	GUAGUGU	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr12_+_57916466_57916527	0.0254113	GUAGUGU	ENST00000355673.3|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr7_-_6523755_6523873	0.0241062	GUAGUGU	ENST00000436575.1|DAGLB|ENSG00000164535.10|diacylglycerol lipase, beta 	ENST00000258739.4|KDELR2|ENSG00000136240.5|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2
hg19_v2_chr17_+_30771279_30771536	0.0237758	GUAGUGU	ENST00000261712.3|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000578213.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000457654.2|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 	ENST00000579451.1|PSMD11|ENSG00000108671.5|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
hg19_v2_chr16_+_10971037_10971076	0.0236442	GUAGUGU	ENST00000324288.8|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator 	ENST00000381835.5|CIITA|ENSG00000179583.13|class II, major histocompatibility complex, transactivator
hg19_v2_chr5_+_140625147_140625147	0.0233517	GUAGUGU	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr15_+_79165151_79165218	0.023345	GUAGUGU	ENST00000331268.5|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr17_+_67410832_67410871	0.0231059	GUAGUGU	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr15_+_31619013_31619095	0.0230126	GUAGUGU	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr2_+_204192942_204193038	0.0215921	GUAGUGU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr9_-_127703333_127703398	0.020414	GUAGUGU	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr12_+_122516626_122516645	0.0200069	GUAGUGU	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chrX_-_102942961_102943011	0.019834	GUAGUGU	ENST00000434230.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000418819.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000360458.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr7_-_5463175_5463195	0.0194749	GUAGUGU	ENST00000399537.4|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18 	ENST00000430969.1|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18
hg19_v2_chr11_-_77532050_77532066	0.0189134	GUAGUGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr2_+_210444142_210444194	0.0177686	GUAGUGU	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr5_+_53813536_53813613	0.0176647	GUAGUGU	ENST00000343017.6|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000381410.4|SNX18|ENSG00000178996.8|sorting nexin 18 	ENST00000326277.3|SNX18|ENSG00000178996.8|sorting nexin 18
hg19_v2_chr8_-_38239732_38239796	0.0154225	GUAGUGU	ENST00000534155.1|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000433384.2|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000317025.8|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1 	ENST00000316985.3|WHSC1L1|ENSG00000147548.12|Wolf-Hirschhorn syndrome candidate 1-like 1
hg19_v2_chrX_+_28605516_28605608	0.0147768	GUAGUGU	ENST00000378993.1|IL1RAPL1|ENSG00000169306.5|interleukin 1 receptor accessory protein-like 1
hg19_v2_chr7_-_151217001_151217019	0.0146638	GUAGUGU	ENST00000262187.5|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr11_+_111473108_111473226	0.012679	GUAGUGU	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr6_-_74363803_74363878	0.0123925	GUAGUGU	ENST00000355773.5|SLC17A5|ENSG00000119899.11|solute carrier family 17 (acidic sugar transporter), member 5
hg19_v2_chr12_-_54582655_54582780	0.0106837	GUAGUGU	ENST00000504338.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514685.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000504797.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000513838.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000505128.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000337581.3|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000503306.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000243112.5|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000514196.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000506169.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000507904.1|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1 	ENST00000508394.2|SMUG1|ENSG00000123415.10|single-strand-selective monofunctional uracil-DNA glycosylase 1
hg19_v2_chr6_+_163835669_163835693	0.0100367	GUAGUGU	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr17_+_73521763_73521870	0.00914721	GUAGUGU	ENST00000167462.5|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000375227.4|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000392550.3|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000578363.1|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000579392.1|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila)
hg19_v2_chr2_-_153032484_153032537	0.00881369	GUAGUGU	ENST00000263904.4|STAM2|ENSG00000115145.5|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg19_v2_chr10_+_97803151_97803348	0.00867644	GUAGUGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr17_-_42992856_42992920	0.00854737	GUAGUGU	ENST00000588316.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000435360.2|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000586793.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000588735.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000588037.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000592320.1|GFAP|ENSG00000131095.7|glial fibrillary acidic protein 	ENST00000253408.5|GFAP|ENSG00000131095.7|glial fibrillary acidic protein
hg19_v2_chr18_+_43753974_43754019	0.00807274	GUAGUGU	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr14_-_23504087_23504118	0.00759105	GUAGUGU	ENST00000493471.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5 	ENST00000460922.2|PSMB5|ENSG00000100804.14|proteasome (prosome, macropain) subunit, beta type, 5
hg19_v2_chr11_+_102188272_102188294	0.00716414	GUAGUGU	ENST00000532808.1|BIRC3|ENSG00000023445.9|baculoviral IAP repeat containing 3
hg19_v2_chr2_+_135676381_135676435	0.00714685	GUAGUGU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr11_+_13299186_13299432	0.00688048	GUAGUGU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr1_+_116184566_116184633	0.00654592	GUAGUGU	ENST00000355485.2|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1 	ENST00000369510.4|VANGL1|ENSG00000173218.10|VANGL planar cell polarity protein 1
hg19_v2_chr13_-_41240717_41240735	0.00644211	GUAGUGU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr8_+_9413410_9413451	0.00628718	GUAGUGU	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr3_-_176914238_176914277	0.00592431	GUAGUGU	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr1_+_218519577_218519594	0.00403415	GUAGUGU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr2_+_198365122_198365137	0.00327422	GUAGUGU	ENST00000604458.1|HSPE1-MOB4|ENSG00000270757.1|HSPE1-MOB4 readthrough
hg19_v2_chr17_-_62340581_62340671	0.00310708	GUAGUGU	ENST00000258991.3|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000583738.1|TEX2|ENSG00000136478.3|testis expressed 2 	ENST00000584379.1|TEX2|ENSG00000136478.3|testis expressed 2
hg19_v2_chr16_-_74700737_74700804	0.00245601	GUAGUGU	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr8_+_99439214_99439250	0.00217113	GUAGUGU	ENST00000287042.4|KCNS2|ENSG00000156486.7|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2
hg19_v2_chr12_-_101801505_101801598	0.000668459	GUAGUGU	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr4_-_16077741_16077760	0.000269446	GUAGUGU	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr5_-_114961858_114961876	4.92491e-05	GUAGUGU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
