hg19_v2_chr12_+_113354341_113354422	4.13772	HOXC12_HOXD12	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr21_-_46012386_46012386	2.96162	HOXC12_HOXD12	ENST00000400368.1|KRTAP10-6|ENSG00000188155.8|keratin associated protein 10-6
hg19_v2_chr7_-_41742697_41742714	2.55032	HOXC12_HOXD12	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr15_-_99789736_99789820	1.83792	HOXC12_HOXD12	ENST00000560235.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394132.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560860.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558078.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394136.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000262074.4|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558613.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394130.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560772.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr13_+_53030107_53030147	1.74146	HOXC12_HOXD12	ENST00000490903.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000480747.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr7_-_27183263_27183287	1.51846	HOXC12_HOXD12	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr3_-_112127981_112128034	1.38836	HOXC12_HOXD12	ENST00000486726.2|RP11-231E6.1|ENSG00000243081.2|RP11-231E6.1
hg19_v2_chr11_+_7618413_7618427	1.34771	HOXC12_HOXD12	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr7_-_27219849_27219880	1.32531	HOXC12_HOXD12	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr1_+_158975744_158975769	1.21723	HOXC12_HOXD12	ENST00000426592.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr19_-_48752812_48752925	1.17861	HOXC12_HOXD12	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr11_-_107328527_107328572	1.17353	HOXC12_HOXD12	ENST00000282251.5|CWF19L2|ENSG00000152404.11|CWF19-like 2, cell cycle control (S. pombe) 	ENST00000433523.1|CWF19L2|ENSG00000152404.11|CWF19-like 2, cell cycle control (S. pombe)
hg19_v2_chr19_-_48753104_48753123	1.15342	HOXC12_HOXD12	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr7_-_27169801_27169844	1.12962	HOXC12_HOXD12	ENST00000511914.1|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr19_-_23941680_23941704	1.12781	HOXC12_HOXD12	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr18_+_3466248_3466312	1.10527	HOXC12_HOXD12	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr1_-_47407097_47407107	1.08791	HOXC12_HOXD12	ENST00000457840.2|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr7_+_138145145_138145209	1.07278	HOXC12_HOXD12	ENST00000415680.2|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr3_+_132036243_132036268	0.999745	HOXC12_HOXD12	ENST00000475741.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000351273.7|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr12_-_30887948_30887997	0.991834	HOXC12_HOXD12	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr13_+_53029564_53029650	0.977242	HOXC12_HOXD12	ENST00000468284.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378034.3|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000258607.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378037.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr10_-_52383644_52383743	0.972033	HOXC12_HOXD12	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr1_+_158900568_158900586	0.876951	HOXC12_HOXD12	ENST00000458222.1|PYHIN1|ENSG00000163564.10|pyrin and HIN domain family, member 1
hg19_v2_chrY_+_2709527_2709653	0.84449	HOXC12_HOXD12	ENST00000250784.8|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr7_+_138145076_138145116	0.839818	HOXC12_HOXD12	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr10_-_90712520_90712536	0.838103	HOXC12_HOXD12	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr21_-_31859755_31859755	0.836652	HOXC12_HOXD12	ENST00000334055.3|KRTAP19-2|ENSG00000186965.3|keratin associated protein 19-2
hg19_v2_chr1_+_63989004_63989077	0.819163	HOXC12_HOXD12	ENST00000371088.4|EFCAB7|ENSG00000203965.8|EF-hand calcium binding domain 7
hg19_v2_chr11_+_22696314_22696332	0.81043	HOXC12_HOXD12	ENST00000532398.1|GAS2|ENSG00000148935.6|growth arrest-specific 2 	ENST00000433790.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr10_-_113943447_113943536	0.803227	HOXC12_HOXD12	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr4_-_123843597_123843766	0.801142	HOXC12_HOXD12	ENST00000510735.1|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6 	ENST00000304430.5|NUDT6|ENSG00000170917.9|nudix (nucleoside diphosphate linked moiety X)-type motif 6
hg19_v2_chr19_-_44905741_44905797	0.798694	HOXC12_HOXD12	ENST00000591679.1|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000544719.2|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000330997.4|ZNF285|ENSG00000267508.1|zinc finger protein 285 	ENST00000588212.1|CTC-512J12.6|ENSG00000267173.1|Uncharacterized protein  	ENST00000585868.1|ZNF285|ENSG00000267508.1|zinc finger protein 285
hg19_v2_chr12_+_6603253_6603303	0.794795	HOXC12_HOXD12	ENST00000382457.4|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2 	ENST00000545962.1|NCAPD2|ENSG00000010292.8|non-SMC condensin I complex, subunit D2
hg19_v2_chr7_+_90339169_90339182	0.792804	HOXC12_HOXD12	ENST00000436577.2|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr11_-_102668879_102668898	0.777491	HOXC12_HOXD12	ENST00000315274.6|MMP1|ENSG00000196611.4|matrix metallopeptidase 1 (interstitial collagenase)
hg19_v2_chr3_-_18466026_18466065	0.760842	HOXC12_HOXD12	ENST00000417717.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr4_-_148605265_148605381	0.756598	HOXC12_HOXD12	ENST00000541232.1|PRMT10|ENSG00000164169.8|protein arginine methyltransferase 10 (putative) 	ENST00000322396.6|PRMT10|ENSG00000164169.8|protein arginine methyltransferase 10 (putative)
hg19_v2_chr1_-_15735925_15735938	0.75596	HOXC12_HOXD12	ENST00000427824.1|RP3-467K16.4|ENSG00000228140.1|RP3-467K16.4
hg19_v2_chrY_+_26997726_26997726	0.750148	HOXC12_HOXD12	ENST00000382296.2|DAZ4|ENSG00000205916.6|deleted in azoospermia 4
hg19_v2_chr2_+_74056066_74056135	0.734475	HOXC12_HOXD12	ENST00000339566.3|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000409707.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000452725.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000432295.2|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000424659.1|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000394073.1|STAMBP|ENSG00000124356.11|STAM binding protein
hg19_v2_chr16_-_28303360_28303393	0.7327	HOXC12_HOXD12	ENST00000501520.1|RP11-57A19.2|ENSG00000246465.1|RP11-57A19.2
hg19_v2_chr8_-_93029865_93029904	0.732471	HOXC12_HOXD12	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr5_+_159656437_159656517	0.724948	HOXC12_HOXD12	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr17_+_56769924_56770000	0.718591	HOXC12_HOXD12	ENST00000461271.1|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000583539.1|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000337432.4|RAD51C|ENSG00000108384.10|RAD51 paralog C 	ENST00000421782.2|RAD51C|ENSG00000108384.10|RAD51 paralog C
hg19_v2_chr9_-_124976154_124976177	0.714752	HOXC12_HOXD12	ENST00000482062.1|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr9_-_124976185_124976212	0.709932	HOXC12_HOXD12	ENST00000464484.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr3_+_32737027_32737048	0.67595	HOXC12_HOXD12	ENST00000454516.2|CNOT10|ENSG00000182973.14|CCR4-NOT transcription complex, subunit 10
hg19_v2_chr5_+_169010638_169010799	0.670461	HOXC12_HOXD12	ENST00000265295.4|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000506574.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000515224.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000508247.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1 	ENST00000513941.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr2_-_170430366_170430390	0.669906	HOXC12_HOXD12	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr3_+_143690640_143690675	0.669523	HOXC12_HOXD12	ENST00000315691.3|C3orf58|ENSG00000181744.4|chromosome 3 open reading frame 58
hg19_v2_chr9_+_137979506_137979585	0.659576	HOXC12_HOXD12	ENST00000539529.1|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000392991.4|OLFM1|ENSG00000130558.14|olfactomedin 1 	ENST00000371793.3|OLFM1|ENSG00000130558.14|olfactomedin 1
hg19_v2_chr19_-_48759119_48759203	0.630501	HOXC12_HOXD12	ENST00000522889.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000520753.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000519940.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000519332.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000521437.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000520007.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000521613.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr10_-_70287231_70287290	0.624487	HOXC12_HOXD12	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr13_+_50570019_50570028	0.601689	HOXC12_HOXD12	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr8_+_107738240_107738340	0.600458	HOXC12_HOXD12	ENST00000449762.2|OXR1|ENSG00000164830.13|oxidation resistance 1 	ENST00000297447.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr1_+_219347203_219347233	0.593348	HOXC12_HOXD12	ENST00000366927.3|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr19_+_42212501_42212521	0.58189	HOXC12_HOXD12	ENST00000398599.4|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5
hg19_v2_chr13_-_79233314_79233331	0.580683	HOXC12_HOXD12	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr21_-_15918618_15918671	0.572979	HOXC12_HOXD12	ENST00000400564.1|SAMSN1|ENSG00000155307.13|SAM domain, SH3 domain and nuclear localization signals 1 	ENST00000400566.1|SAMSN1|ENSG00000155307.13|SAM domain, SH3 domain and nuclear localization signals 1
hg19_v2_chr8_+_118147498_118147567	0.567241	HOXC12_HOXD12	ENST00000519688.1|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8 	ENST00000456015.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr2_+_190541153_190541177	0.557945	HOXC12_HOXD12	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr12_-_10007448_10007448	0.557059	HOXC12_HOXD12	ENST00000538152.1|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr1_+_202431859_202431871	0.555024	HOXC12_HOXD12	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr2_+_67624430_67624479	0.550263	HOXC12_HOXD12	ENST00000272342.5|ETAA1|ENSG00000143971.7|Ewing tumor-associated antigen 1
hg19_v2_chr6_+_71122974_71123011	0.545833	HOXC12_HOXD12	ENST00000418814.2|FAM135A|ENSG00000082269.12|family with sequence similarity 135, member A
hg19_v2_chr2_-_177502254_177502360	0.537539	HOXC12_HOXD12	ENST00000339037.3|AC017048.3|ENSG00000163364.5|long intergenic non-protein coding RNA 1116
hg19_v2_chr13_+_34392200_34392221	0.53077	HOXC12_HOXD12	ENST00000434425.1|RFC3|ENSG00000133119.8|replication factor C (activator 1) 3, 38kDa
hg19_v2_chr11_+_111896090_111896207	0.517596	HOXC12_HOXD12	ENST00000393051.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase
hg19_v2_chr2_-_211179883_211179914	0.512795	HOXC12_HOXD12	ENST00000352451.3|MYL1|ENSG00000168530.11|myosin, light chain 1, alkali; skeletal, fast
hg19_v2_chr6_-_166796461_166796496	0.488098	HOXC12_HOXD12	ENST00000360961.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1 	ENST00000341756.6|MPC1|ENSG00000060762.14|mitochondrial pyruvate carrier 1
hg19_v2_chr8_-_13134045_13134063	0.486404	HOXC12_HOXD12	ENST00000512044.2|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr13_-_46543805_46543881	0.482663	HOXC12_HOXD12	ENST00000378921.2|ZC3H13|ENSG00000123200.12|zinc finger CCCH-type containing 13
hg19_v2_chr1_-_101491319_101491355	0.480379	HOXC12_HOXD12	ENST00000342173.7|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000488176.1|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5 	ENST00000370109.3|DPH5|ENSG00000117543.15|diphthamide biosynthesis 5
hg19_v2_chr12_-_31743901_31743956	0.471386	HOXC12_HOXD12	ENST00000354285.4|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr13_+_53602894_53602924	0.46035	HOXC12_HOXD12	ENST00000219022.2|OLFM4|ENSG00000102837.6|olfactomedin 4
hg19_v2_chr19_-_48753028_48753043	0.458101	HOXC12_HOXD12	ENST00000522431.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr8_-_92053212_92053292	0.456666	HOXC12_HOXD12	ENST00000285419.3|TMEM55A|ENSG00000155099.3|transmembrane protein 55A
hg19_v2_chr6_-_51952418_51952428	0.445286	HOXC12_HOXD12	ENST00000371117.3|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr19_+_21264980_21265026	0.441976	HOXC12_HOXD12	ENST00000596053.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000597086.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596143.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596367.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000601416.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr2_+_101869262_101869279	0.440093	HOXC12_HOXD12	ENST00000289382.3|CNOT11|ENSG00000158435.3|CCR4-NOT transcription complex, subunit 11
hg19_v2_chr2_+_61372226_61372273	0.439551	HOXC12_HOXD12	ENST00000426997.1|C2orf74|ENSG00000237651.2|chromosome 2 open reading frame 74
hg19_v2_chr19_-_48753064_48753095	0.432052	HOXC12_HOXD12	ENST00000520153.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000357778.5|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000520015.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr20_+_36946029_36946057	0.429485	HOXC12_HOXD12	ENST00000417318.1|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr9_-_130533615_130533717	0.429381	HOXC12_HOXD12	ENST00000373277.4|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr2_+_37571845_37571874	0.4266	HOXC12_HOXD12	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr2_+_37571717_37571779	0.418976	HOXC12_HOXD12	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr2_-_201753717_201753748	0.413267	HOXC12_HOXD12	ENST00000409264.2|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr4_+_39460620_39460656	0.412624	HOXC12_HOXD12	ENST00000340169.2|LIAS|ENSG00000121897.9|lipoic acid synthetase 	ENST00000261434.3|LIAS|ENSG00000121897.9|lipoic acid synthetase
hg19_v2_chr12_-_95945246_95945270	0.411787	HOXC12_HOXD12	ENST00000258499.3|USP44|ENSG00000136014.7|ubiquitin specific peptidase 44
hg19_v2_chr14_-_22005343_22005364	0.40895	HOXC12_HOXD12	ENST00000327430.3|SALL2|ENSG00000165821.7|spalt-like transcription factor 2
hg19_v2_chr7_+_64838786_64838809	0.40643	HOXC12_HOXD12	ENST00000450302.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr19_+_21106081_21106207	0.404051	HOXC12_HOXD12	ENST00000300540.3|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000595854.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000601284.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000328178.8|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000599885.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000596476.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000345030.6|ZNF85|ENSG00000105750.10|zinc finger protein 85
hg19_v2_chrX_-_133792480_133792522	0.403798	HOXC12_HOXD12	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chr3_+_148508845_148508889	0.40297	HOXC12_HOXD12	ENST00000491148.1|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue)
hg19_v2_chr1_+_171750776_171750870	0.399974	HOXC12_HOXD12	ENST00000458517.1|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000362019.3|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000367737.5|METTL13|ENSG00000010165.15|methyltransferase like 13 	ENST00000361735.3|METTL13|ENSG00000010165.15|methyltransferase like 13
hg19_v2_chr12_-_11287243_11287243	0.391791	HOXC12_HOXD12	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr19_+_37342547_37342561	0.38368	HOXC12_HOXD12	ENST00000331800.4|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000586646.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr11_+_101785727_101785767	0.38187	HOXC12_HOXD12	ENST00000263468.8|KIAA1377|ENSG00000110318.9|KIAA1377
hg19_v2_chr2_-_201753980_201754026	0.375016	HOXC12_HOXD12	ENST00000443398.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000286175.8|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000409449.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr7_+_149535455_149535555	0.370411	HOXC12_HOXD12	ENST00000223210.4|ZNF862|ENSG00000106479.6|zinc finger protein 862 	ENST00000460379.1|ZNF862|ENSG00000106479.6|zinc finger protein 862
hg19_v2_chr3_-_56502375_56502428	0.36899	HOXC12_HOXD12	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr13_-_47471155_47471214	0.368021	HOXC12_HOXD12	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr20_+_36932521_36932532	0.361022	HOXC12_HOXD12	ENST00000262865.4|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr3_+_16306837_16306973	0.360881	HOXC12_HOXD12	ENST00000606098.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chrY_+_2709906_2709961	0.359826	HOXC12_HOXD12	ENST00000430575.1|RPS4Y1|ENSG00000129824.11|ribosomal protein S4, Y-linked 1
hg19_v2_chr9_+_2029019_2029164	0.35884	HOXC12_HOXD12	ENST00000382194.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr10_-_1071796_1071801	0.357484	HOXC12_HOXD12	ENST00000277517.1|IDI2|ENSG00000148377.5|isopentenyl-diphosphate delta isomerase 2
hg19_v2_chr12_-_88535747_88535841	0.355167	HOXC12_HOXD12	ENST00000309041.7|CEP290|ENSG00000198707.10|centrosomal protein 290kDa
hg19_v2_chr7_+_64838712_64838778	0.354871	HOXC12_HOXD12	ENST00000328747.7|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000431504.1|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000357512.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr2_-_201753859_201753888	0.35143	HOXC12_HOXD12	ENST00000409361.1|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3 	ENST00000392283.4|PPIL3|ENSG00000240344.4|peptidylprolyl isomerase (cyclophilin)-like 3
hg19_v2_chr2_+_74056147_74056159	0.345484	HOXC12_HOXD12	ENST00000394070.2|STAMBP|ENSG00000124356.11|STAM binding protein 	ENST00000536064.1|STAMBP|ENSG00000124356.11|STAM binding protein
hg19_v2_chr14_-_39901618_39901704	0.344498	HOXC12_HOXD12	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr14_+_90422239_90422381	0.340765	HOXC12_HOXD12	ENST00000393452.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000554180.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000393454.2|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553617.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000335725.4|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000357382.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000556867.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553527.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1
hg19_v2_chr1_+_219347186_219347197	0.336397	HOXC12_HOXD12	ENST00000366928.5|LYPLAL1|ENSG00000143353.7|lysophospholipase-like 1
hg19_v2_chr10_-_74856608_74856732	0.332214	HOXC12_HOXD12	ENST00000307116.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000373008.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000412021.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000394890.2|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000263556.3|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I 	ENST00000440381.1|P4HA1|ENSG00000122884.8|prolyl 4-hydroxylase, alpha polypeptide I
hg19_v2_chr22_-_36925186_36925231	0.326323	HOXC12_HOXD12	ENST00000541106.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000455547.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000432675.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr22_-_36924944_36925044	0.323295	HOXC12_HOXD12	ENST00000405442.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D 	ENST00000402116.1|EIF3D|ENSG00000100353.13|eukaryotic translation initiation factor 3, subunit D
hg19_v2_chr19_-_23869970_23869991	0.323192	HOXC12_HOXD12	ENST00000601010.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr2_+_201754050_201754130	0.321021	HOXC12_HOXD12	ENST00000426253.1|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 	ENST00000416651.1|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 	ENST00000454952.1|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 	ENST00000409020.1|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 	ENST00000359683.4|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
hg19_v2_chr1_-_11986442_11986502	0.319776	HOXC12_HOXD12	ENST00000376572.3|KIAA2013|ENSG00000116685.11|KIAA2013 	ENST00000376576.3|KIAA2013|ENSG00000116685.11|KIAA2013
hg19_v2_chr19_+_21579958_21579975	0.3192	HOXC12_HOXD12	ENST00000339914.6|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000599461.1|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr14_+_57046530_57046602	0.3164	HOXC12_HOXD12	ENST00000536419.1|TMEM260|ENSG00000070269.9|transmembrane protein 260 	ENST00000538838.1|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr9_-_98269481_98269691	0.315418	HOXC12_HOXD12	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr3_+_137906109_137906153	0.310796	HOXC12_HOXD12	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr19_+_21579908_21579949	0.307887	HOXC12_HOXD12	ENST00000596302.1|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000392288.2|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000594390.1|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000355504.4|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr17_-_36904437_36904631	0.307733	HOXC12_HOXD12	ENST00000585100.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000360797.2|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000578109.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2 	ENST00000579882.1|PCGF2|ENSG00000056661.9|polycomb group ring finger 2
hg19_v2_chr10_-_99052382_99052413	0.306411	HOXC12_HOXD12	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr2_+_138721850_138721890	0.301814	HOXC12_HOXD12	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr9_+_115513003_115513137	0.301193	HOXC12_HOXD12	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr8_+_17013515_17013540	0.299428	HOXC12_HOXD12	ENST00000262096.8|ZDHHC2|ENSG00000104219.8|zinc finger, DHHC-type containing 2
hg19_v2_chr10_-_70287172_70287183	0.298909	HOXC12_HOXD12	ENST00000539557.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr5_+_135468516_135468621	0.298765	HOXC12_HOXD12	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chrX_-_100548045_100548059	0.292432	HOXC12_HOXD12	ENST00000372907.3|TAF7L|ENSG00000102387.11|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa 	ENST00000372905.2|TAF7L|ENSG00000102387.11|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
hg19_v2_chr16_+_67906919_67906937	0.292191	HOXC12_HOXD12	ENST00000358933.5|EDC4|ENSG00000038358.10|enhancer of mRNA decapping 4
hg19_v2_chr7_+_152456904_152456915	0.291429	HOXC12_HOXD12	ENST00000537264.1|ACTR3B|ENSG00000133627.13|ARP3 actin-related protein 3 homolog B (yeast)
hg19_v2_chr2_-_100721923_100722045	0.289122	HOXC12_HOXD12	ENST00000356421.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr17_-_29624343_29624429	0.287621	HOXC12_HOXD12	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr12_+_120105558_120105694	0.285617	HOXC12_HOXD12	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr14_-_68000442_68000456	0.283621	HOXC12_HOXD12	ENST00000554278.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr7_+_57509877_57509895	0.278301	HOXC12_HOXD12	ENST00000420713.1|ZNF716|ENSG00000182111.8|zinc finger protein 716
hg19_v2_chr7_-_112758665_112758672	0.278038	HOXC12_HOXD12	ENST00000397764.3|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr4_+_6202448_6202488	0.277423	HOXC12_HOXD12	ENST00000508601.1|RP11-586D19.1|ENSG00000249896.1|RP11-586D19.1
hg19_v2_chr7_+_90012986_90013035	0.276047	HOXC12_HOXD12	ENST00000416322.1|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr21_+_46359907_46359962	0.275032	HOXC12_HOXD12	ENST00000291634.6|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A 	ENST00000397826.3|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A 	ENST00000458015.1|FAM207A|ENSG00000160256.8|family with sequence similarity 207, member A
hg19_v2_chr7_-_121944491_121944705	0.272427	HOXC12_HOXD12	ENST00000331178.4|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000427185.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1 	ENST00000442488.2|FEZF1|ENSG00000128610.7|FEZ family zinc finger 1
hg19_v2_chr5_+_140254884_140255058	0.26913	HOXC12_HOXD12	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr11_+_111896320_111896332	0.268282	HOXC12_HOXD12	ENST00000531306.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase 	ENST00000537636.1|DLAT|ENSG00000150768.11|dihydrolipoamide S-acetyltransferase
hg19_v2_chr7_-_99149715_99149757	0.266961	HOXC12_HOXD12	ENST00000449309.1|FAM200A|ENSG00000221909.2|family with sequence similarity 200, member A
hg19_v2_chr4_-_16085340_16085358	0.264082	HOXC12_HOXD12	ENST00000508167.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr5_+_140535577_140535577	0.259104	HOXC12_HOXD12	ENST00000539533.1|PCDHB17|ENSG00000255622.1|Protocadherin-psi1; Uncharacterized protein
hg19_v2_chr19_+_21265028_21265056	0.256102	HOXC12_HOXD12	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr2_+_201754135_201754170	0.254238	HOXC12_HOXD12	ENST00000409357.1|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) 	ENST00000409129.2|NIF3L1|ENSG00000196290.10|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
hg19_v2_chr1_+_117297007_117297099	0.253676	HOXC12_HOXD12	ENST00000369478.3|CD2|ENSG00000116824.4|CD2 molecule 	ENST00000369477.1|CD2|ENSG00000116824.4|CD2 molecule
hg19_v2_chr17_+_18759612_18759689	0.253409	HOXC12_HOXD12	ENST00000432893.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000414602.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000574522.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000570450.1|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2 	ENST00000419071.2|PRPSAP2|ENSG00000141127.10|phosphoribosyl pyrophosphate synthetase-associated protein 2
hg19_v2_chr14_+_21387508_21387523	0.25225	HOXC12_HOXD12	ENST00000555624.1|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr17_-_7232585_7232712	0.25176	HOXC12_HOXD12	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr20_-_17539456_17539605	0.247989	HOXC12_HOXD12	ENST00000544874.1|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin 	ENST00000377868.2|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin
hg19_v2_chr14_+_57046500_57046529	0.247762	HOXC12_HOXD12	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr17_-_73127778_73127821	0.246506	HOXC12_HOXD12	ENST00000578407.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr1_-_23504176_23504301	0.246472	HOXC12_HOXD12	ENST00000302291.4|LUZP1|ENSG00000169641.9|leucine zipper protein 1
hg19_v2_chr4_-_682960_683060	0.245234	HOXC12_HOXD12	ENST00000512249.1|MFSD7|ENSG00000169026.8|major facilitator superfamily domain containing 7 	ENST00000515118.1|MFSD7|ENSG00000169026.8|major facilitator superfamily domain containing 7 	ENST00000347950.5|MFSD7|ENSG00000169026.8|major facilitator superfamily domain containing 7
hg19_v2_chr19_-_38085633_38085706	0.240935	HOXC12_HOXD12	ENST00000593133.1|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000590751.1|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000358744.3|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000328550.2|ZNF571|ENSG00000180479.9|zinc finger protein 571 	ENST00000451802.2|ZNF571|ENSG00000180479.9|zinc finger protein 571
hg19_v2_chr14_+_55494323_55494345	0.240363	HOXC12_HOXD12	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr1_-_23886285_23886336	0.240253	HOXC12_HOXD12	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr5_+_140514782_140514851	0.239545	HOXC12_HOXD12	ENST00000231134.5|PCDHB5|ENSG00000113209.6|protocadherin beta 5
hg19_v2_chr4_-_16085314_16085334	0.237898	HOXC12_HOXD12	ENST00000510224.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr12_-_6602955_6603022	0.237459	HOXC12_HOXD12	ENST00000543703.1|MRPL51|ENSG00000111639.3|mitochondrial ribosomal protein L51
hg19_v2_chr1_-_161015752_161015778	0.237141	HOXC12_HOXD12	ENST00000435396.1|USF1|ENSG00000158773.10|upstream transcription factor 1 	ENST00000368021.3|USF1|ENSG00000158773.10|upstream transcription factor 1
hg19_v2_chr3_+_179322481_179322494	0.236826	HOXC12_HOXD12	ENST00000259037.3|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr3_-_165555200_165555260	0.236496	HOXC12_HOXD12	ENST00000479451.1|BCHE|ENSG00000114200.5|butyrylcholinesterase 	ENST00000540653.1|BCHE|ENSG00000114200.5|butyrylcholinesterase 	ENST00000488954.1|BCHE|ENSG00000114200.5|butyrylcholinesterase 	ENST00000264381.3|BCHE|ENSG00000114200.5|butyrylcholinesterase
hg19_v2_chr17_-_73127826_73127890	0.234219	HOXC12_HOXD12	ENST00000582170.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000245552.2|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr18_-_19994830_19994830	0.234012	HOXC12_HOXD12	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr4_-_153601136_153601317	0.233776	HOXC12_HOXD12	ENST00000504064.1|TMEM154|ENSG00000170006.7|transmembrane protein 154 	ENST00000304385.3|TMEM154|ENSG00000170006.7|transmembrane protein 154
hg19_v2_chr2_-_27435125_27435182	0.233288	HOXC12_HOXD12	ENST00000414408.1|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6 	ENST00000310574.3|SLC5A6|ENSG00000138074.10|solute carrier family 5 (sodium/multivitamin and iodide cotransporter), member 6
hg19_v2_chr6_-_116601044_116601106	0.233137	HOXC12_HOXD12	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr1_+_151584544_151584558	0.231143	HOXC12_HOXD12	ENST00000458013.2|SNX27|ENSG00000143376.8|sorting nexin family member 27 	ENST00000368843.3|SNX27|ENSG00000143376.8|sorting nexin family member 27
hg19_v2_chr4_-_95264008_95264035	0.229985	HOXC12_HOXD12	ENST00000295256.5|HPGDS|ENSG00000163106.6|hematopoietic prostaglandin D synthase
hg19_v2_chr10_+_6625733_6625767	0.229436	HOXC12_HOXD12	ENST00000607982.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1 	ENST00000608526.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1
hg19_v2_chr8_+_16884740_16884804	0.229202	HOXC12_HOXD12	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr1_+_149230680_149230716	0.22846	HOXC12_HOXD12	ENST00000443018.1|RP11-403I13.5|ENSG00000232721.1|RP11-403I13.5
hg19_v2_chr19_-_58326267_58326292	0.227821	HOXC12_HOXD12	ENST00000391701.1|ZNF552|ENSG00000178935.5|zinc finger protein 552
hg19_v2_chr11_+_35160709_35160853	0.225303	HOXC12_HOXD12	ENST00000415148.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000433354.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000449691.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000437706.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000360158.4|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000428726.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000526669.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000433892.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000278386.6|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000434472.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000352818.4|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000442151.2|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr7_+_76090993_76091044	0.222544	HOXC12_HOXD12	ENST00000425780.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000456590.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000451769.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000324432.5|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000307569.8|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000457529.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000446600.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000413936.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000423646.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000438930.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000430490.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr11_+_36616044_36616121	0.222406	HOXC12_HOXD12	ENST00000334307.5|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000531554.1|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000347206.4|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000534635.1|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000446510.2|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000530697.1|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74 	ENST00000527108.1|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74
hg19_v2_chr19_-_23869999_23870022	0.222114	HOXC12_HOXD12	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr12_-_76879852_76879888	0.221858	HOXC12_HOXD12	ENST00000548341.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr7_-_130080977_130081078	0.221788	HOXC12_HOXD12	ENST00000223208.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr14_+_21387491_21387506	0.218633	HOXC12_HOXD12	ENST00000258817.2|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr14_-_50319758_50319921	0.21407	HOXC12_HOXD12	ENST00000298310.5|NEMF|ENSG00000165525.13|nuclear export mediator factor
hg19_v2_chr17_-_71228357_71228533	0.213715	HOXC12_HOXD12	ENST00000583024.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000403627.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000405159.3|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000581110.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr4_+_110354928_110355030	0.210806	HOXC12_HOXD12	ENST00000504968.2|SEC24B|ENSG00000138802.7|SEC24 family member B 	ENST00000399100.2|SEC24B|ENSG00000138802.7|SEC24 family member B 	ENST00000265175.5|SEC24B|ENSG00000138802.7|SEC24 family member B
hg19_v2_chrX_+_118425471_118425492	0.21031	HOXC12_HOXD12	ENST00000428222.1|RP5-1139I1.1|ENSG00000230392.1|RP5-1139I1.1
hg19_v2_chr22_+_23134974_23134990	0.21007	HOXC12_HOXD12	ENST00000390314.2|IGLV2-11|ENSG00000211668.2|immunoglobulin lambda variable 2-11
hg19_v2_chr5_+_140227048_140227048	0.208711	HOXC12_HOXD12	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr13_+_78315466_78315519	0.206093	HOXC12_HOXD12	ENST00000314070.5|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1 	ENST00000462234.1|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr14_-_50319482_50319564	0.203131	HOXC12_HOXD12	ENST00000546046.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000555970.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000554626.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000545773.1|NEMF|ENSG00000165525.13|nuclear export mediator factor 	ENST00000556672.1|NEMF|ENSG00000165525.13|nuclear export mediator factor
hg19_v2_chr5_+_140213815_140213969	0.201004	HOXC12_HOXD12	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr18_-_5544241_5544280	0.200077	HOXC12_HOXD12	ENST00000341928.2|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3 	ENST00000540638.2|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr4_-_83765613_83765662	0.200006	HOXC12_HOXD12	ENST00000503937.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr20_-_48782639_48782743	0.197668	HOXC12_HOXD12	ENST00000435301.2|RP11-112L6.3|ENSG00000237595.2|RP11-112L6.3
hg19_v2_chr3_-_19975665_19975719	0.196832	HOXC12_HOXD12	ENST00000295824.9|EFHB|ENSG00000163576.13|EF-hand domain family, member B 	ENST00000389256.4|EFHB|ENSG00000163576.13|EF-hand domain family, member B
hg19_v2_chr1_+_36396677_36396749	0.196773	HOXC12_HOXD12	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr7_-_112758589_112758619	0.195969	HOXC12_HOXD12	ENST00000413744.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000439551.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000441359.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr6_+_13272904_13272989	0.194366	HOXC12_HOXD12	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr12_+_60083118_60083157	0.194291	HOXC12_HOXD12	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr14_-_82089405_82089428	0.192339	HOXC12_HOXD12	ENST00000554211.1|RP11-799P8.1|ENSG00000258977.1|RP11-799P8.1
hg19_v2_chr7_+_2443202_2443260	0.19183	HOXC12_HOXD12	ENST00000258711.6|CHST12|ENSG00000136213.7|carbohydrate (chondroitin 4) sulfotransferase 12
hg19_v2_chr1_+_59775752_59775763	0.190172	HOXC12_HOXD12	ENST00000371212.1|FGGY|ENSG00000172456.12|FGGY carbohydrate kinase domain containing
hg19_v2_chr3_+_4535025_4535040	0.189092	HOXC12_HOXD12	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr4_-_39367949_39368020	0.188443	HOXC12_HOXD12	ENST00000503784.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000349703.2|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000381897.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa
hg19_v2_chr1_+_178694300_178694346	0.186501	HOXC12_HOXD12	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr14_+_24702127_24702154	0.183089	HOXC12_HOXD12	ENST00000557854.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000348719.7|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559104.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000456667.3|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr7_-_132261223_132261236	0.181139	HOXC12_HOXD12	ENST00000423507.2|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr10_+_6625605_6625641	0.180835	HOXC12_HOXD12	ENST00000414894.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1 	ENST00000449648.1|PRKCQ-AS1|ENSG00000237943.2|PRKCQ antisense RNA 1
hg19_v2_chr7_+_141811539_141811557	0.180703	HOXC12_HOXD12	ENST00000550469.2|RP11-1220K2.2|ENSG00000257743.4|Putative inactive maltase-glucoamylase-like protein LOC93432  	ENST00000477922.3|RP11-1220K2.2|ENSG00000257743.4|Putative inactive maltase-glucoamylase-like protein LOC93432
hg19_v2_chr17_-_34890732_34890754	0.177914	HOXC12_HOXD12	ENST00000268852.9|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr12_-_122751002_122751068	0.17523	HOXC12_HOXD12	ENST00000267199.4|VPS33A|ENSG00000139719.5|vacuolar protein sorting 33 homolog A (S. cerevisiae)
hg19_v2_chr6_-_51952367_51952416	0.171882	HOXC12_HOXD12	ENST00000340994.4|PKHD1|ENSG00000170927.10|polycystic kidney and hepatic disease 1 (autosomal recessive)
hg19_v2_chr19_-_22018966_22019010	0.169431	HOXC12_HOXD12	ENST00000599906.1|ZNF43|ENSG00000198521.7|zinc finger protein 43 	ENST00000354959.4|ZNF43|ENSG00000198521.7|zinc finger protein 43
hg19_v2_chr1_-_7913089_7913096	0.165521	HOXC12_HOXD12	ENST00000361696.5|UTS2|ENSG00000049247.9|urotensin 2
hg19_v2_chr20_-_44540686_44540804	0.164946	HOXC12_HOXD12	ENST00000477313.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000542937.1|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000372431.3|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000354050.4|PLTP|ENSG00000100979.10|phospholipid transfer protein 	ENST00000420868.2|PLTP|ENSG00000100979.10|phospholipid transfer protein
hg19_v2_chr3_-_14166316_14166383	0.163164	HOXC12_HOXD12	ENST00000396914.3|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4 	ENST00000295767.5|CHCHD4|ENSG00000163528.8|coiled-coil-helix-coiled-coil-helix domain containing 4
hg19_v2_chr1_-_247697141_247697141	0.162278	HOXC12_HOXD12	ENST00000366487.3|OR2C3|ENSG00000196242.6|olfactory receptor, family 2, subfamily C, member 3
hg19_v2_chr1_+_199996702_199996732	0.15987	HOXC12_HOXD12	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr9_+_125703282_125703337	0.158802	HOXC12_HOXD12	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr3_+_132036207_132036218	0.158774	HOXC12_HOXD12	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr6_-_110011718_110011873	0.1554	HOXC12_HOXD12	ENST00000532976.1|AK9|ENSG00000155085.11|adenylate kinase 9
hg19_v2_chr8_-_60031762_60031803	0.154732	HOXC12_HOXD12	ENST00000361421.1|TOX|ENSG00000198846.5|thymocyte selection-associated high mobility group box
hg19_v2_chr15_-_41836441_41836475	0.152712	HOXC12_HOXD12	ENST00000567866.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000561603.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000304330.4|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1 	ENST00000566863.1|RPAP1|ENSG00000103932.7|RNA polymerase II associated protein 1
hg19_v2_chr19_-_49496557_49496573	0.151789	HOXC12_HOXD12	ENST00000323798.3|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000541188.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000544287.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000540532.1|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle) 	ENST00000263276.6|GYS1|ENSG00000104812.10|glycogen synthase 1 (muscle)
hg19_v2_chr7_-_156433195_156433348	0.1514	HOXC12_HOXD12	ENST00000333319.6|C7orf13|ENSG00000244291.1|chromosome 7 open reading frame 13
hg19_v2_chr14_+_24701628_24701730	0.151334	HOXC12_HOXD12	ENST00000355299.4|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559836.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr16_-_29499154_29499154	0.151168	HOXC12_HOXD12	ENST00000354563.5|RP11-231C14.4|ENSG00000169203.12|Uncharacterized protein
hg19_v2_chr15_+_79166065_79166163	0.150804	HOXC12_HOXD12	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr2_+_217277137_217277266	0.150736	HOXC12_HOXD12	ENST00000430374.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000357276.4|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 	ENST00000444508.1|SMARCAL1|ENSG00000138375.8|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
hg19_v2_chr1_-_154458520_154458520	0.14835	HOXC12_HOXD12	ENST00000486773.1|SHE|ENSG00000169291.5|Src homology 2 domain containing E
hg19_v2_chr8_-_120605194_120605248	0.147735	HOXC12_HOXD12	ENST00000522167.1|ENPP2|ENSG00000136960.8|ectonucleotide pyrophosphatase/phosphodiesterase 2
hg19_v2_chr2_+_135596106_135596137	0.147441	HOXC12_HOXD12	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr7_+_107110488_107110515	0.146859	HOXC12_HOXD12	ENST00000304402.4|GPR22|ENSG00000172209.4|G protein-coupled receptor 22
hg19_v2_chr7_+_141490017_141490017	0.14581	HOXC12_HOXD12	ENST00000247883.4|TAS2R5|ENSG00000127366.4|taste receptor, type 2, member 5
hg19_v2_chr17_-_73127353_73127633	0.144157	HOXC12_HOXD12	ENST00000580423.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000578337.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic 	ENST00000582160.1|NT5C|ENSG00000125458.2|5', 3'-nucleotidase, cytosolic
hg19_v2_chr11_+_46366918_46366992	0.143038	HOXC12_HOXD12	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr2_-_86564776_86564813	0.142988	HOXC12_HOXD12	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr18_-_19283649_19283830	0.142099	HOXC12_HOXD12	ENST00000584464.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3 	ENST00000578270.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3
hg19_v2_chr17_+_11501816_11501834	0.140799	HOXC12_HOXD12	ENST00000454412.2|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr4_-_74088800_74088844	0.139904	HOXC12_HOXD12	ENST00000509867.2|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr4_-_114682364_114682379	0.139875	HOXC12_HOXD12	ENST00000511664.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr4_+_119199904_119199923	0.1398	HOXC12_HOXD12	ENST00000602483.1|SNHG8|ENSG00000269893.2|small nucleolar RNA host gene 8 (non-protein coding) 	ENST00000602819.1|SNHG8|ENSG00000269893.2|small nucleolar RNA host gene 8 (non-protein coding)
hg19_v2_chr2_+_119981384_119981446	0.136865	HOXC12_HOXD12	ENST00000393108.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000354888.5|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000450943.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393110.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393106.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000409811.1|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase 	ENST00000393107.2|STEAP3|ENSG00000115107.15|STEAP family member 3, metalloreductase
hg19_v2_chr4_-_114682224_114682309	0.135949	HOXC12_HOXD12	ENST00000342666.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000515496.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000514328.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000508738.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000379773.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr2_+_201450591_201450680	0.13491	HOXC12_HOXD12	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr1_+_199996733_199996781	0.134596	HOXC12_HOXD12	ENST00000236914.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr15_+_72410629_72410648	0.134575	HOXC12_HOXD12	ENST00000340912.4|SENP8|ENSG00000166192.10|SUMO/sentrin specific peptidase family member 8 	ENST00000544171.1|SENP8|ENSG00000166192.10|SUMO/sentrin specific peptidase family member 8
hg19_v2_chr5_+_93954039_93954052	0.133912	HOXC12_HOXD12	ENST00000265140.5|ANKRD32|ENSG00000133302.8|ankyrin repeat domain 32
hg19_v2_chr3_-_108672742_108672763	0.13352	HOXC12_HOXD12	ENST00000261047.3|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C
hg19_v2_chr12_+_67663056_67663067	0.132954	HOXC12_HOXD12	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr4_-_17513702_17513720	0.131691	HOXC12_HOXD12	ENST00000428702.2|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase 	ENST00000508623.1|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase 	ENST00000513615.1|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr15_-_55657428_55657474	0.131685	HOXC12_HOXD12	ENST00000568543.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr1_-_158656488_158656511	0.130961	HOXC12_HOXD12	ENST00000368147.4|SPTA1|ENSG00000163554.7|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)
hg19_v2_chr14_+_24702099_24702124	0.130142	HOXC12_HOXD12	ENST00000420554.2|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr12_-_71182695_71182762	0.129788	HOXC12_HOXD12	ENST00000342084.4|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr9_+_133569108_133569193	0.129433	HOXC12_HOXD12	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
hg19_v2_chr6_+_19837592_19837621	0.128487	HOXC12_HOXD12	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr14_+_24701819_24701869	0.126253	HOXC12_HOXD12	ENST00000560139.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559910.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr17_-_26127525_26127556	0.124199	HOXC12_HOXD12	ENST00000313735.6|NOS2|ENSG00000007171.12|nitric oxide synthase 2, inducible
hg19_v2_chr22_+_23101182_23101198	0.123038	HOXC12_HOXD12	ENST00000390312.2|IGLV2-14|ENSG00000211666.2|immunoglobulin lambda variable 2-14
hg19_v2_chr14_+_31028348_31028516	0.122876	HOXC12_HOXD12	ENST00000550944.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase 	ENST00000438909.2|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase 	ENST00000553504.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase
hg19_v2_chr16_+_20818020_20818066	0.122376	HOXC12_HOXD12	ENST00000564274.1|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp  	ENST00000563068.1|AC004381.6|ENSG00000005189.15|Putative RNA exonuclease NEF-sp
hg19_v2_chr5_-_43397184_43397366	0.122178	HOXC12_HOXD12	ENST00000513525.1|CCL28|ENSG00000151882.7|chemokine (C-C motif) ligand 28
hg19_v2_chr17_-_8286484_8286531	0.120446	HOXC12_HOXD12	ENST00000582556.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000584164.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000293842.5|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000584343.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000578812.1|RPL26|ENSG00000161970.8|ribosomal protein L26 	ENST00000583011.1|RPL26|ENSG00000161970.8|ribosomal protein L26
hg19_v2_chr19_+_42212526_42212576	0.117082	HOXC12_HOXD12	ENST00000598976.1|CEA|ENSG00000267881.1|Uncharacterized protein  	ENST00000221992.6|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000405816.1|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000435837.2|CEA|ENSG00000267881.1|Uncharacterized protein
hg19_v2_chr2_+_39103103_39103209	0.11654	HOXC12_HOXD12	ENST00000340556.6|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000410014.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409665.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409077.2|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409131.2|MORN2|ENSG00000188010.8|MORN repeat containing 2
hg19_v2_chr16_+_67143880_67144050	0.116284	HOXC12_HOXD12	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr17_+_11501748_11501806	0.114132	HOXC12_HOXD12	ENST00000262442.4|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9 	ENST00000579828.1|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr13_-_28545276_28545276	0.113944	HOXC12_HOXD12	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr19_+_49496782_49496873	0.112594	HOXC12_HOXD12	ENST00000601968.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2 	ENST00000596837.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr14_+_24702073_24702082	0.110987	HOXC12_HOXD12	ENST00000399440.2|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr15_-_90222642_90222658	0.110123	HOXC12_HOXD12	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr19_-_52408257_52408278	0.110114	HOXC12_HOXD12	ENST00000354957.3|ZNF649|ENSG00000198093.6|zinc finger protein 649 	ENST00000600738.1|ZNF649|ENSG00000198093.6|zinc finger protein 649 	ENST00000595418.1|ZNF649|ENSG00000198093.6|zinc finger protein 649 	ENST00000599530.1|ZNF649|ENSG00000198093.6|zinc finger protein 649
hg19_v2_chr2_-_70475701_70475717	0.109908	HOXC12_HOXD12	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr19_-_43708378_43708403	0.108681	HOXC12_HOXD12	ENST00000599746.1|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr3_+_40566369_40566400	0.108678	HOXC12_HOXD12	ENST00000403205.2|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000310898.1|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000339296.5|ZNF621|ENSG00000172888.7|zinc finger protein 621 	ENST00000431278.1|ZNF621|ENSG00000172888.7|zinc finger protein 621
hg19_v2_chr4_+_78829479_78829479	0.108133	HOXC12_HOXD12	ENST00000504901.1|MRPL1|ENSG00000169288.13|mitochondrial ribosomal protein L1
hg19_v2_chr15_-_90222610_90222634	0.105996	HOXC12_HOXD12	ENST00000300055.5|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr1_-_202896310_202896406	0.105377	HOXC12_HOXD12	ENST00000367261.3|KLHL12|ENSG00000117153.11|kelch-like family member 12
hg19_v2_chr1_-_153113927_153113972	0.103927	HOXC12_HOXD12	ENST00000368752.4|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr8_-_27850141_27850179	0.097534	HOXC12_HOXD12	ENST00000524352.1|SCARA5|ENSG00000168079.12|scavenger receptor class A, member 5 (putative)
hg19_v2_chr3_+_138327417_138327451	0.0975038	HOXC12_HOXD12	ENST00000338446.4|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr8_-_21669826_21669869	0.0947065	HOXC12_HOXD12	ENST00000517328.1|GFRA2|ENSG00000168546.6|GDNF family receptor alpha 2
hg19_v2_chr3_-_108672609_108672636	0.0932127	HOXC12_HOXD12	ENST00000393963.3|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C 	ENST00000471108.1|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C
hg19_v2_chrX_+_105412290_105412313	0.0915044	HOXC12_HOXD12	ENST00000357175.2|MUM1L1|ENSG00000157502.8|melanoma associated antigen (mutated) 1-like 1 	ENST00000337685.2|MUM1L1|ENSG00000157502.8|melanoma associated antigen (mutated) 1-like 1
hg19_v2_chr17_+_71228740_71228776	0.0913071	HOXC12_HOXD12	ENST00000268942.8|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000359042.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr12_+_59989918_59989965	0.0911217	HOXC12_HOXD12	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr2_-_70475730_70475798	0.0902716	HOXC12_HOXD12	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr17_-_39526052_39526052	0.0896484	HOXC12_HOXD12	ENST00000251646.3|KRT33B|ENSG00000131738.5|keratin 33B
hg19_v2_chr8_-_38008783_38008783	0.0894059	HOXC12_HOXD12	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr4_+_48833234_48833245	0.0889329	HOXC12_HOXD12	ENST00000510824.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000425583.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr4_+_119199864_119199890	0.0889146	HOXC12_HOXD12	ENST00000602414.1|SNHG8|ENSG00000269893.2|small nucleolar RNA host gene 8 (non-protein coding) 	ENST00000602520.1|SNHG8|ENSG00000269893.2|small nucleolar RNA host gene 8 (non-protein coding)
hg19_v2_chr17_-_34890759_34890815	0.0885983	HOXC12_HOXD12	ENST00000431794.3|MYO19|ENSG00000141140.12|myosin XIX
hg19_v2_chr17_+_3379284_3379345	0.0875149	HOXC12_HOXD12	ENST00000263080.2|ASPA|ENSG00000108381.6|aspartoacylase
hg19_v2_chr3_+_138327542_138327693	0.0859324	HOXC12_HOXD12	ENST00000360570.3|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule 	ENST00000393035.2|FAIM|ENSG00000158234.8|Fas apoptotic inhibitory molecule
hg19_v2_chr8_+_1993152_1993168	0.0858825	HOXC12_HOXD12	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr15_+_77223960_77223994	0.0846634	HOXC12_HOXD12	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr3_+_118905564_118905595	0.082782	HOXC12_HOXD12	ENST00000460625.1|UPK1B|ENSG00000114638.3|uroplakin 1B
hg19_v2_chr12_+_54402790_54402832	0.0823811	HOXC12_HOXD12	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr2_-_225362533_225362546	0.0821655	HOXC12_HOXD12	ENST00000451538.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr3_-_51909600_51909619	0.0812836	HOXC12_HOXD12	ENST00000446461.1|IQCF5|ENSG00000214681.3|IQ motif containing F5
hg19_v2_chr6_-_34855773_34855866	0.0804755	HOXC12_HOXD12	ENST00000420584.2|TAF11|ENSG00000064995.12|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa 	ENST00000361288.4|TAF11|ENSG00000064995.12|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa
hg19_v2_chr11_-_796197_796361	0.0799737	HOXC12_HOXD12	ENST00000530360.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000528606.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000320230.5|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr11_-_3400442_3400453	0.0782	HOXC12_HOXD12	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr15_-_66797172_66797221	0.0780435	HOXC12_HOXD12	ENST00000569438.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000569696.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000307961.6|RPL4|ENSG00000174444.10|ribosomal protein L4
hg19_v2_chr8_+_117963190_117963224	0.0779747	HOXC12_HOXD12	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr18_+_12703002_12703066	0.0754929	HOXC12_HOXD12	ENST00000590217.1|PSMG2|ENSG00000128789.16|proteasome (prosome, macropain) assembly chaperone 2
hg19_v2_chr2_+_131769256_131769328	0.0752682	HOXC12_HOXD12	ENST00000355771.3|ARHGEF4|ENSG00000136002.12|Rho guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr16_+_66914264_66914516	0.0751616	HOXC12_HOXD12	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr12_-_15114191_15114233	0.0739061	HOXC12_HOXD12	ENST00000541380.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr5_-_180670370_180670382	0.0734738	HOXC12_HOXD12	ENST00000502844.1|GNB2L1|ENSG00000204628.7|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1
hg19_v2_chr7_-_32529973_32530030	0.0729292	HOXC12_HOXD12	ENST00000410044.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409987.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000409782.1|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000450169.2|LSM5|ENSG00000106355.5|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr10_+_124913930_124913946	0.0728843	HOXC12_HOXD12	ENST00000368858.5|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr4_-_100140331_100140409	0.0722197	HOXC12_HOXD12	ENST00000407820.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394897.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000508558.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394899.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V)
hg19_v2_chr11_+_71900572_71900602	0.0714891	HOXC12_HOXD12	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr17_+_35732955_35732985	0.0711598	HOXC12_HOXD12	ENST00000300618.4|C17orf78|ENSG00000167230.6|chromosome 17 open reading frame 78
hg19_v2_chr3_-_196911002_196911116	0.0711118	HOXC12_HOXD12	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr15_+_77224045_77224121	0.0702093	HOXC12_HOXD12	ENST00000320963.5|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain 	ENST00000394883.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr9_-_88896977_88897023	0.06883	HOXC12_HOXD12	ENST00000311534.6|ISCA1|ENSG00000135070.9|iron-sulfur cluster assembly 1
hg19_v2_chr17_-_46667594_46667619	0.0688078	HOXC12_HOXD12	ENST00000476342.1|HOXB3|ENSG00000120093.7|homeobox B3 	ENST00000460160.1|HOXB3|ENSG00000120093.7|homeobox B3 	ENST00000472863.1|HOXB3|ENSG00000120093.7|homeobox B3
hg19_v2_chr10_-_27529486_27529497	0.0678947	HOXC12_HOXD12	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr12_-_91573132_91573245	0.0672683	HOXC12_HOXD12	ENST00000550563.1|DCN|ENSG00000011465.12|decorin 	ENST00000546370.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr6_-_127840021_127840047	0.0669195	HOXC12_HOXD12	ENST00000465909.2|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr8_+_1993173_1993199	0.0667437	HOXC12_HOXD12	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr4_+_106631966_106632003	0.0660637	HOXC12_HOXD12	ENST00000360505.5|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000510865.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000509336.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr16_-_20364122_20364200	0.0652195	HOXC12_HOXD12	ENST00000396138.4|UMOD|ENSG00000169344.11|uromodulin 	ENST00000577168.1|UMOD|ENSG00000169344.11|uromodulin
hg19_v2_chr1_+_16083154_16083168	0.0651804	HOXC12_HOXD12	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr19_+_49497121_49497166	0.0635253	HOXC12_HOXD12	ENST00000413176.2|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chrX_+_99899180_99899215	0.0633474	HOXC12_HOXD12	ENST00000373004.3|SRPX2|ENSG00000102359.5|sushi-repeat containing protein, X-linked 2
hg19_v2_chr10_+_124670121_124670217	0.0590083	HOXC12_HOXD12	ENST00000368894.1|FAM24A|ENSG00000203795.2|family with sequence similarity 24, member A
hg19_v2_chr4_-_17513851_17513862	0.0585792	HOXC12_HOXD12	ENST00000281243.5|QDPR|ENSG00000151552.7|quinoid dihydropteridine reductase
hg19_v2_chr17_-_39637392_39637404	0.0581688	HOXC12_HOXD12	ENST00000246639.2|KRT35|ENSG00000197079.4|keratin 35 	ENST00000393989.1|KRT35|ENSG00000197079.4|keratin 35
hg19_v2_chr1_-_53686261_53686329	0.0577171	HOXC12_HOXD12	ENST00000294360.4|C1orf123|ENSG00000162384.9|chromosome 1 open reading frame 123
hg19_v2_chr4_-_156298087_156298127	0.0573081	HOXC12_HOXD12	ENST00000311277.4|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr6_-_27782548_27782607	0.0561197	HOXC12_HOXD12	ENST00000333151.3|HIST1H2AJ|ENSG00000182611.3|histone cluster 1, H2aj
hg19_v2_chrX_-_48958043_48958059	0.0560155	HOXC12_HOXD12	ENST00000356463.3|WDR45|ENSG00000196998.11|WD repeat domain 45
hg19_v2_chr7_+_100551239_100551256	0.0551939	HOXC12_HOXD12	ENST00000319509.7|MUC3A|ENSG00000169894.13|mucin 3A, cell surface associated
hg19_v2_chr2_+_27434860_27434964	0.0548447	HOXC12_HOXD12	ENST00000380171.3|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor
hg19_v2_chr17_-_46667628_46667642	0.0534976	HOXC12_HOXD12	ENST00000498678.1|HOXB3|ENSG00000120093.7|homeobox B3
hg19_v2_chr12_-_30848914_30848948	0.0533061	HOXC12_HOXD12	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr7_-_71868354_71868431	0.0529344	HOXC12_HOXD12	ENST00000412588.1|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr10_-_12238071_12238154	0.052835	HOXC12_HOXD12	ENST00000491614.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5 	ENST00000537776.1|NUDT5|ENSG00000165609.8|nudix (nucleoside diphosphate linked moiety X)-type motif 5
hg19_v2_chr2_-_136594740_136594760	0.0528034	HOXC12_HOXD12	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr12_-_13248562_13248596	0.0527547	HOXC12_HOXD12	ENST00000457134.2|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000537302.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr19_+_49496705_49496776	0.0523104	HOXC12_HOXD12	ENST00000595090.1|RUVBL2|ENSG00000183207.8|RuvB-like AAA ATPase 2
hg19_v2_chr6_+_52930237_52930257	0.0518025	HOXC12_HOXD12	ENST00000323557.7|FBXO9|ENSG00000112146.12|F-box protein 9
hg19_v2_chr2_+_234545148_234545161	0.0514585	HOXC12_HOXD12	ENST00000373445.1|UGT1A10|ENSG00000242515.1|UDP glucuronosyltransferase 1 family, polypeptide A10
hg19_v2_chr12_-_13248705_13248710	0.0513829	HOXC12_HOXD12	ENST00000396310.2|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr12_+_14956506_14956636	0.0513388	HOXC12_HOXD12	ENST00000330828.2|C12orf60|ENSG00000182993.3|chromosome 12 open reading frame 60
hg19_v2_chr5_+_140227357_140227357	0.0511091	HOXC12_HOXD12	ENST00000378122.3|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr12_-_13248732_13248744	0.050961	HOXC12_HOXD12	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr4_-_68749699_68749725	0.0505401	HOXC12_HOXD12	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr15_-_34331243_34331429	0.0502537	HOXC12_HOXD12	ENST00000306730.3|AVEN|ENSG00000169857.3|apoptosis, caspase activation inhibitor
hg19_v2_chr9_+_134065506_134065509	0.0498572	HOXC12_HOXD12	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr7_+_23338819_23338973	0.0490564	HOXC12_HOXD12	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr4_-_69111401_69111438	0.0484883	HOXC12_HOXD12	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr12_-_59175485_59175529	0.0479243	HOXC12_HOXD12	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr3_-_131221790_131221835	0.0478843	HOXC12_HOXD12	ENST00000512877.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000264995.3|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000511168.1|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3 	ENST00000425847.2|MRPL3|ENSG00000114686.4|mitochondrial ribosomal protein L3
hg19_v2_chr14_+_66975213_66975239	0.0475625	HOXC12_HOXD12	ENST00000543237.1|GPHN|ENSG00000171723.11|gephyrin 	ENST00000305960.9|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr14_-_106494587_106494603	0.0474547	HOXC12_HOXD12	ENST00000390597.2|IGHV2-5|ENSG00000211937.2|immunoglobulin heavy variable 2-5
hg19_v2_chr19_-_5680202_5680220	0.0473341	HOXC12_HOXD12	ENST00000590389.1|C19orf70|ENSG00000174917.4|chromosome 19 open reading frame 70
hg19_v2_chr11_-_3400330_3400422	0.0472434	HOXC12_HOXD12	ENST00000427810.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000005082.9|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000534569.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000438262.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528796.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528410.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000529678.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000354599.6|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000526601.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000525502.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000533036.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000399602.4|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr12_-_15114603_15114631	0.0468931	HOXC12_HOXD12	ENST00000228945.4|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr12_+_4758264_4758314	0.0462074	HOXC12_HOXD12	ENST00000266544.5|NDUFA9|ENSG00000139180.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
hg19_v2_chr4_-_111119804_111119832	0.0448946	HOXC12_HOXD12	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr16_-_12897642_12897874	0.0439993	HOXC12_HOXD12	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr2_+_138722028_138722057	0.0434245	HOXC12_HOXD12	ENST00000280096.5|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr11_-_5255861_5255888	0.0432446	HOXC12_HOXD12	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr2_-_85645545_85645560	0.0430729	HOXC12_HOXD12	ENST00000409275.1|CAPG|ENSG00000042493.11|capping protein (actin filament), gelsolin-like
hg19_v2_chr1_+_171060018_171060060	0.0429405	HOXC12_HOXD12	ENST00000367755.4|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000392085.2|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000542847.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000538429.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000479749.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3
hg19_v2_chr17_+_17685422_17685446	0.0425428	HOXC12_HOXD12	ENST00000395774.1|RAI1|ENSG00000108557.13|retinoic acid induced 1
hg19_v2_chr10_-_51371321_51371321	0.0421465	HOXC12_HOXD12	ENST00000602930.1|AGAP8|ENSG00000174194.11|ArfGAP with GTPase domain, ankyrin repeat and PH domain 8
hg19_v2_chr11_+_63449045_63449099	0.0409976	HOXC12_HOXD12	ENST00000354497.4|RTN3|ENSG00000133318.9|reticulon 3
hg19_v2_chr9_-_124855885_124855885	0.0406852	HOXC12_HOXD12	ENST00000321582.5|TTLL11|ENSG00000175764.10|tubulin tyrosine ligase-like family, member 11 	ENST00000373776.3|TTLL11|ENSG00000175764.10|tubulin tyrosine ligase-like family, member 11
hg19_v2_chr6_-_106773491_106773559	0.0404905	HOXC12_HOXD12	ENST00000360666.4|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr4_+_146539415_146539415	0.0404259	HOXC12_HOXD12	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr2_+_169312350_169312372	0.0401497	HOXC12_HOXD12	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr6_-_112080256_112080334	0.0397197	HOXC12_HOXD12	ENST00000462856.2|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES 	ENST00000229471.4|FYN|ENSG00000010810.13|FYN oncogene related to SRC, FGR, YES
hg19_v2_chr2_+_27435179_27435240	0.0385652	HOXC12_HOXD12	ENST00000606999.1|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor 	ENST00000405489.3|ATRAID|ENSG00000138085.12|all-trans retinoic acid-induced differentiation factor
hg19_v2_chr4_+_70894130_70894188	0.0384615	HOXC12_HOXD12	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chr1_+_166958504_166958525	0.0377564	HOXC12_HOXD12	ENST00000447624.1|MAEL|ENSG00000143194.8|maelstrom spermatogenic transposon silencer
hg19_v2_chr14_-_77889860_77889878	0.0372742	HOXC12_HOXD12	ENST00000555603.1|NOXRED1|ENSG00000165555.5|NADP-dependent oxidoreductase domain containing 1
hg19_v2_chr2_+_55746746_55746872	0.0369871	HOXC12_HOXD12	ENST00000406691.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000349456.4|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000407816.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000403007.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104
hg19_v2_chr2_-_152589670_152589705	0.035837	HOXC12_HOXD12	ENST00000604864.1|NEB|ENSG00000183091.15|nebulin 	ENST00000603639.1|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr2_-_89521942_89521942	0.0343935	HOXC12_HOXD12	ENST00000482769.1|IGKV2-28|ENSG00000244116.1|immunoglobulin kappa variable 2-28
hg19_v2_chr1_-_67266939_67266939	0.0342199	HOXC12_HOXD12	ENST00000304526.2|INSL5|ENSG00000172410.4|insulin-like 5
hg19_v2_chr3_+_179322573_179322614	0.0339793	HOXC12_HOXD12	ENST00000493866.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000472629.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000482604.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr16_-_18908196_18908278	0.0324393	HOXC12_HOXD12	ENST00000565324.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000561947.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr19_-_55453077_55453120	0.0318846	HOXC12_HOXD12	ENST00000328092.5|NLRP7|ENSG00000167634.8|NLR family, pyrin domain containing 7 	ENST00000590030.1|NLRP7|ENSG00000167634.8|NLR family, pyrin domain containing 7
hg19_v2_chr10_-_75226166_75226169	0.0312261	HOXC12_HOXD12	ENST00000544628.1|PPP3CB|ENSG00000107758.11|protein phosphatase 3, catalytic subunit, beta isozyme
hg19_v2_chr1_-_169680745_169680839	0.0302933	HOXC12_HOXD12	ENST00000236147.4|SELL|ENSG00000188404.4|selectin L
hg19_v2_chr7_+_80275621_80275648	0.0299219	HOXC12_HOXD12	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr1_+_24117627_24117659	0.0289768	HOXC12_HOXD12	ENST00000400061.1|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr18_+_61223393_61223393	0.0288607	HOXC12_HOXD12	ENST00000269491.1|SERPINB12|ENSG00000166634.2|serpin peptidase inhibitor, clade B (ovalbumin), member 12 	ENST00000382768.1|SERPINB12|ENSG00000166634.2|serpin peptidase inhibitor, clade B (ovalbumin), member 12
hg19_v2_chr17_+_10600894_10600974	0.0283894	HOXC12_HOXD12	ENST00000379774.4|ADPRM|ENSG00000170222.11|ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
hg19_v2_chr14_-_70826438_70826453	0.0281168	HOXC12_HOXD12	ENST00000389912.6|COX16|ENSG00000133983.10|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
hg19_v2_chr9_+_131062367_131062367	0.028032	HOXC12_HOXD12	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr4_-_68749745_68749756	0.0279832	HOXC12_HOXD12	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr6_-_137365402_137365416	0.0275599	HOXC12_HOXD12	ENST00000541547.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr4_-_70080449_70080449	0.0274822	HOXC12_HOXD12	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr19_+_44331493_44331552	0.0273064	HOXC12_HOXD12	ENST00000588797.1|ZNF283|ENSG00000167637.12|zinc finger protein 283
hg19_v2_chr5_-_33297946_33298016	0.0268566	HOXC12_HOXD12	ENST00000510327.1|CTD-2066L21.3|ENSG00000250697.1|CTD-2066L21.3
hg19_v2_chr12_-_15114492_15114565	0.0267161	HOXC12_HOXD12	ENST00000541546.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chr18_-_53253112_53253199	0.0267142	HOXC12_HOXD12	ENST00000568673.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000562847.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000568147.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr11_-_19223523_19223589	0.0265907	HOXC12_HOXD12	ENST00000265968.3|CSRP3|ENSG00000129170.4|cysteine and glycine-rich protein 3 (cardiac LIM protein)
hg19_v2_chr19_+_45409011_45409069	0.0265528	HOXC12_HOXD12	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr6_+_34725263_34725331	0.0259481	HOXC12_HOXD12	ENST00000374018.1|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C 	ENST00000374017.3|SNRPC|ENSG00000124562.5|small nuclear ribonucleoprotein polypeptide C
hg19_v2_chr8_-_101718991_101719023	0.025863	HOXC12_HOXD12	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr6_+_20534672_20534745	0.0258607	HOXC12_HOXD12	ENST00000274695.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1 	ENST00000378624.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1
hg19_v2_chr12_+_32832134_32832196	0.0246375	HOXC12_HOXD12	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr2_-_70475586_70475646	0.0245864	HOXC12_HOXD12	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr5_-_156569754_156569786	0.0232055	HOXC12_HOXD12	ENST00000420343.1|MED7|ENSG00000155868.7|mediator complex subunit 7
hg19_v2_chr17_+_37856214_37856250	0.0223486	HOXC12_HOXD12	ENST00000445658.2|ERBB2|ENSG00000141736.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2
hg19_v2_chr7_-_31380502_31380515	0.0223218	HOXC12_HOXD12	ENST00000297142.3|NEUROD6|ENSG00000164600.4|neuronal differentiation 6
hg19_v2_chr11_+_63606373_63606418	0.0222889	HOXC12_HOXD12	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr3_+_26735991_26736046	0.0212717	HOXC12_HOXD12	ENST00000456208.2|LRRC3B|ENSG00000179796.7|leucine rich repeat containing 3B
hg19_v2_chr6_+_132455118_132455176	0.0199018	HOXC12_HOXD12	ENST00000458028.1|LINC01013|ENSG00000228495.1|long intergenic non-protein coding RNA 1013
hg19_v2_chr7_+_138915102_138915102	0.0184591	HOXC12_HOXD12	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr18_-_53253323_53253359	0.0183106	HOXC12_HOXD12	ENST00000540999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000563888.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr1_-_47407136_47407154	0.0180899	HOXC12_HOXD12	ENST00000462347.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000371905.1|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11 	ENST00000310638.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr19_+_37341752_37341816	0.0166679	HOXC12_HOXD12	ENST00000586933.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000532141.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000420450.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000526123.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr1_+_166958497_166958501	0.0154688	HOXC12_HOXD12	ENST00000367870.2|MAEL|ENSG00000143194.8|maelstrom spermatogenic transposon silencer
hg19_v2_chr5_+_8839844_8839877	0.0154372	HOXC12_HOXD12	ENST00000510229.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3	ENST00000506655.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3	ENST00000510067.1|RP11-143A12.3|ENSG00000250198.1|RP11-143A12.3
hg19_v2_chr8_+_107738343_107738413	0.0153052	HOXC12_HOXD12	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr14_-_24701539_24701660	0.0145143	HOXC12_HOXD12	ENST00000534348.1|NEDD8-MDP1|ENSG00000255526.2|NEDD8-MDP1 readthrough 	ENST00000524927.1|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8 	ENST00000250495.5|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8
hg19_v2_chr6_+_57182400_57182440	0.0134519	HOXC12_HOXD12	ENST00000607273.1|PRIM2|ENSG00000146143.13|primase, DNA, polypeptide 2 (58kDa)
hg19_v2_chr17_+_37856253_37856296	0.0133016	HOXC12_HOXD12	ENST00000540147.1|ERBB2|ENSG00000141736.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2 	ENST00000584450.1|ERBB2|ENSG00000141736.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 2
hg19_v2_chr11_+_30252549_30252565	0.0130858	HOXC12_HOXD12	ENST00000254122.3|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide 	ENST00000417547.1|FSHB|ENSG00000131808.6|follicle stimulating hormone, beta polypeptide
hg19_v2_chr9_-_26892765_26892822	0.0127814	HOXC12_HOXD12	ENST00000520187.1|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1 	ENST00000333916.5|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1
hg19_v2_chr10_+_124913793_124913927	0.0113138	HOXC12_HOXD12	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr7_-_27702455_27702632	0.0110508	HOXC12_HOXD12	ENST00000265395.2|HIBADH|ENSG00000106049.4|3-hydroxyisobutyrate dehydrogenase
hg19_v2_chr12_+_104697504_104697585	0.0109598	HOXC12_HOXD12	ENST00000527879.1|EID3|ENSG00000255150.1|EP300 interacting inhibitor of differentiation 3
hg19_v2_chr1_-_216978709_216978728	0.0109292	HOXC12_HOXD12	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr12_+_119419294_119419308	0.0107414	HOXC12_HOXD12	ENST00000267260.4|SRRM4|ENSG00000139767.4|serine/arginine repetitive matrix 4
hg19_v2_chr19_-_39523165_39523236	0.0101319	HOXC12_HOXD12	ENST00000509137.2|FBXO27|ENSG00000161243.4|F-box protein 27 	ENST00000292853.4|FBXO27|ENSG00000161243.4|F-box protein 27
hg19_v2_chr5_-_39274617_39274636	0.00958312	HOXC12_HOXD12	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr2_-_228582709_228582754	0.00911175	HOXC12_HOXD12	ENST00000541617.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409456.2|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409287.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000258403.3|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3
hg19_v2_chr12_-_10875831_10876025	0.00899938	HOXC12_HOXD12	ENST00000279550.7|YBX3|ENSG00000060138.8|Y box binding protein 3 	ENST00000228251.4|YBX3|ENSG00000060138.8|Y box binding protein 3
hg19_v2_chr6_-_28554977_28555112	0.00808944	HOXC12_HOXD12	ENST00000452236.2|SCAND3|ENSG00000232040.2|SCAN domain containing 3
hg19_v2_chr19_+_2785458_2785548	0.00714619	HOXC12_HOXD12	ENST00000307741.6|THOP1|ENSG00000172009.10|thimet oligopeptidase 1 	ENST00000585338.1|THOP1|ENSG00000172009.10|thimet oligopeptidase 1
hg19_v2_chr16_-_3450963_3451065	0.00680852	HOXC12_HOXD12	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chr2_+_11674213_11674242	0.00652575	HOXC12_HOXD12	ENST00000381486.2|GREB1|ENSG00000196208.9|growth regulation by estrogen in breast cancer 1
hg19_v2_chr1_-_151254362_151254405	0.00534554	HOXC12_HOXD12	ENST00000447795.2|RP11-126K1.2|ENSG00000232671.2|Uncharacterized protein
hg19_v2_chr3_-_196242233_196242240	0.00393188	HOXC12_HOXD12	ENST00000397537.2|SMCO1|ENSG00000214097.4|single-pass membrane protein with coiled-coil domains 1
hg19_v2_chr3_+_63638339_63638365	0.00326153	HOXC12_HOXD12	ENST00000343837.3|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein 	ENST00000469440.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chrX_-_138724677_138724887	0.00295914	HOXC12_HOXD12	ENST00000370573.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000338585.6|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence 	ENST00000370576.4|MCF2|ENSG00000101977.15|MCF.2 cell line derived transforming sequence
hg19_v2_chr4_+_122722466_122722556	0.00113842	HOXC12_HOXD12	ENST00000243498.5|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000379663.3|EXOSC9|ENSG00000123737.8|exosome component 9 	ENST00000509800.1|EXOSC9|ENSG00000123737.8|exosome component 9
hg19_v2_chr3_+_50606901_50606967	0.000760454	HOXC12_HOXD12	ENST00000455834.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
