hg19_v2_chr4_+_86525299_86525314	1.80558	HOXD11_HOXA11	ENST00000512201.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr17_-_39646116_39646164	1.58235	HOXD11_HOXA11	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr6_+_32812568_32812631	1.57128	HOXD11_HOXA11	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr21_-_31869451_31869451	1.30252	HOXD11_HOXA11	ENST00000334058.2|KRTAP19-4|ENSG00000186967.6|keratin associated protein 19-4
hg19_v2_chr3_-_79816965_79817094	0.869387	HOXD11_HOXA11	ENST00000464233.1|ROBO1|ENSG00000169855.15|roundabout, axon guidance receptor, homolog 1 (Drosophila)
hg19_v2_chr4_-_76957214_76957350	0.81625	HOXD11_HOXA11	ENST00000306621.3|CXCL11|ENSG00000169248.8|chemokine (C-X-C motif) ligand 11
hg19_v2_chr10_-_24770632_24770632	0.799842	HOXD11_HOXA11	ENST00000596413.1|AL353583.1|ENSG00000269879.1|AL353583.1
hg19_v2_chr7_-_41742697_41742714	0.760121	HOXD11_HOXA11	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr21_-_31859755_31859755	0.752903	HOXD11_HOXA11	ENST00000334055.3|KRTAP19-2|ENSG00000186965.3|keratin associated protein 19-2
hg19_v2_chr8_+_66955648_66955712	0.72051	HOXD11_HOXA11	ENST00000522619.1|DNAJC5B|ENSG00000147570.5|DnaJ (Hsp40) homolog, subfamily C, member 5 beta
hg19_v2_chr10_+_102222798_102222798	0.682156	HOXD11_HOXA11	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr11_+_34663913_34663945	0.622322	HOXD11_HOXA11	ENST00000532302.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr7_+_35756092_35756105	0.618422	HOXD11_HOXA11	ENST00000458087.3|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr7_+_35756186_35756202	0.614485	HOXD11_HOXA11	ENST00000430518.1|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr11_+_120039685_120039685	0.599463	HOXD11_HOXA11	ENST00000530303.1|AP000679.2|ENSG00000176984.2|Uncharacterized protein  	ENST00000319763.1|AP000679.2|ENSG00000176984.2|Uncharacterized protein
hg19_v2_chr8_+_118147498_118147567	0.576882	HOXD11_HOXA11	ENST00000519688.1|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8 	ENST00000456015.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr1_+_62439037_62439047	0.556993	HOXD11_HOXA11	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr8_+_125985531_125985571	0.547196	HOXD11_HOXA11	ENST00000319286.5|ZNF572|ENSG00000180938.5|zinc finger protein 572
hg19_v2_chr1_+_79086088_79086182	0.525204	HOXD11_HOXA11	ENST00000370751.5|IFI44L|ENSG00000137959.11|interferon-induced protein 44-like 	ENST00000342282.3|IFI44L|ENSG00000137959.11|interferon-induced protein 44-like
hg19_v2_chr11_-_51412448_51412448	0.521758	HOXD11_HOXA11	ENST00000319760.6|OR4A5|ENSG00000221840.2|olfactory receptor, family 4, subfamily A, member 5
hg19_v2_chr10_-_115904361_115904375	0.51834	HOXD11_HOXA11	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr17_+_42785976_42786039	0.495559	HOXD11_HOXA11	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr3_-_156534754_156534851	0.485555	HOXD11_HOXA11	ENST00000472943.1|LINC00886|ENSG00000240875.1|long intergenic non-protein coding RNA 886 	ENST00000473352.1|LINC00886|ENSG00000240875.1|long intergenic non-protein coding RNA 886
hg19_v2_chr2_+_67624430_67624479	0.483235	HOXD11_HOXA11	ENST00000272342.5|ETAA1|ENSG00000143971.7|Ewing tumor-associated antigen 1
hg19_v2_chr5_-_135290705_135290723	0.463814	HOXD11_HOXA11	ENST00000274507.1|LECT2|ENSG00000145826.4|leukocyte cell-derived chemotaxin 2
hg19_v2_chr3_+_151531810_151531849	0.463426	HOXD11_HOXA11	ENST00000232892.7|AADAC|ENSG00000114771.9|arylacetamide deacetylase
hg19_v2_chr1_+_6640108_6640148	0.457858	HOXD11_HOXA11	ENST00000377674.4|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48 	ENST00000488936.1|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48
hg19_v2_chr10_+_24755416_24755470	0.455852	HOXD11_HOXA11	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr3_+_101546827_101546847	0.450028	HOXD11_HOXA11	ENST00000461724.1|NFKBIZ|ENSG00000144802.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 	ENST00000483180.1|NFKBIZ|ENSG00000144802.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 	ENST00000394054.2|NFKBIZ|ENSG00000144802.7|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta
hg19_v2_chr2_-_216878305_216878363	0.440269	HOXD11_HOXA11	ENST00000263268.6|MREG|ENSG00000118242.11|melanoregulin
hg19_v2_chr11_+_19798964_19799013	0.43876	HOXD11_HOXA11	ENST00000527559.2|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr11_-_796197_796361	0.433574	HOXD11_HOXA11	ENST00000530360.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000528606.1|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22 	ENST00000320230.5|SLC25A22|ENSG00000177542.6|solute carrier family 25 (mitochondrial carrier: glutamate), member 22
hg19_v2_chr15_-_58571445_58571478	0.424086	HOXD11_HOXA11	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr10_-_90712520_90712536	0.404823	HOXD11_HOXA11	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr4_+_146539415_146539415	0.404276	HOXD11_HOXA11	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr11_-_5173599_5173599	0.39942	HOXD11_HOXA11	ENST00000328942.1|OR52A1|ENSG00000182070.4|olfactory receptor, family 52, subfamily A, member 1
hg19_v2_chr3_-_46068969_46068986	0.389152	HOXD11_HOXA11	ENST00000542109.1|XCR1|ENSG00000173578.6|chemokine (C motif) receptor 1 	ENST00000395946.2|XCR1|ENSG00000173578.6|chemokine (C motif) receptor 1
hg19_v2_chr5_-_41261540_41261575	0.385305	HOXD11_HOXA11	ENST00000263413.3|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr8_+_94241867_94241867	0.382627	HOXD11_HOXA11	ENST00000598428.1|AC016885.1|ENSG00000268080.1|Uncharacterized protein
hg19_v2_chr3_+_16306837_16306973	0.376473	HOXD11_HOXA11	ENST00000606098.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chr19_+_46367518_46367567	0.376426	HOXD11_HOXA11	ENST00000302177.2|FOXA3|ENSG00000170608.2|forkhead box A3
hg19_v2_chr6_+_12290586_12290600	0.374337	HOXD11_HOXA11	ENST00000379375.5|EDN1|ENSG00000078401.6|endothelin 1
hg19_v2_chr4_+_71458012_71458019	0.372543	HOXD11_HOXA11	ENST00000449493.2|AMBN|ENSG00000178522.10|ameloblastin (enamel matrix protein)
hg19_v2_chr17_-_39684550_39684567	0.368163	HOXD11_HOXA11	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr2_-_214013353_214013517	0.358663	HOXD11_HOXA11	ENST00000451136.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000421754.2|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000374327.4|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios) 	ENST00000413091.3|IKZF2|ENSG00000030419.12|IKAROS family zinc finger 2 (Helios)
hg19_v2_chr9_-_133814455_133814520	0.358609	HOXD11_HOXA11	ENST00000448616.1|FIBCD1|ENSG00000130720.8|fibrinogen C domain containing 1
hg19_v2_chr8_-_116504448_116504481	0.352138	HOXD11_HOXA11	ENST00000518018.1|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr1_+_171107241_171107241	0.351957	HOXD11_HOXA11	ENST00000236166.3|FMO6P|ENSG00000117507.4|flavin containing monooxygenase 6 pseudogene
hg19_v2_chrX_+_16668278_16668282	0.349067	HOXD11_HOXA11	ENST00000380200.3|S100G|ENSG00000169906.5|S100 calcium binding protein G
hg19_v2_chr7_-_36634181_36634262	0.346685	HOXD11_HOXA11	ENST00000538464.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr11_-_3663212_3663227	0.342156	HOXD11_HOXA11	ENST00000397067.3|ART5|ENSG00000167311.9|ADP-ribosyltransferase 5
hg19_v2_chr15_-_80263506_80263553	0.327436	HOXD11_HOXA11	ENST00000335661.6|BCL2A1|ENSG00000140379.7|BCL2-related protein A1
hg19_v2_chr2_-_136678123_136678165	0.32615	HOXD11_HOXA11	ENST00000422708.1|DARS|ENSG00000115866.6|aspartyl-tRNA synthetase
hg19_v2_chr4_+_88754113_88754139	0.325462	HOXD11_HOXA11	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr4_-_76928641_76928668	0.323628	HOXD11_HOXA11	ENST00000264888.5|CXCL9|ENSG00000138755.5|chemokine (C-X-C motif) ligand 9
hg19_v2_chr5_+_148521381_148521388	0.312895	HOXD11_HOXA11	ENST00000504238.1|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr7_+_141811539_141811557	0.311984	HOXD11_HOXA11	ENST00000550469.2|RP11-1220K2.2|ENSG00000257743.4|Putative inactive maltase-glucoamylase-like protein LOC93432  	ENST00000477922.3|RP11-1220K2.2|ENSG00000257743.4|Putative inactive maltase-glucoamylase-like protein LOC93432
hg19_v2_chr17_-_39306054_39306077	0.30992	HOXD11_HOXA11	ENST00000343246.4|KRTAP4-5|ENSG00000198271.3|keratin associated protein 4-5
hg19_v2_chr12_-_18243075_18243091	0.302809	HOXD11_HOXA11	ENST00000536890.1|RERGL|ENSG00000111404.2|RERG/RAS-like
hg19_v2_chr12_+_6833437_6833472	0.292866	HOXD11_HOXA11	ENST00000534947.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000541866.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000534877.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000538753.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A
hg19_v2_chr6_+_127898312_127898326	0.290892	HOXD11_HOXA11	ENST00000329722.7|C6orf58|ENSG00000184530.8|chromosome 6 open reading frame 58
hg19_v2_chr19_-_10420459_10420556	0.290205	HOXD11_HOXA11	ENST00000403352.1|ZGLP1|ENSG00000220201.3|zinc finger, GATA-like protein 1 	ENST00000403903.3|ZGLP1|ENSG00000220201.3|zinc finger, GATA-like protein 1
hg19_v2_chr8_+_77318769_77318889	0.289542	HOXD11_HOXA11	ENST00000518732.1|RP11-706J10.1|ENSG00000254300.1|long intergenic non-protein coding RNA 1111
hg19_v2_chr6_-_82462425_82462491	0.289028	HOXD11_HOXA11	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr12_+_6833237_6833248	0.28848	HOXD11_HOXA11	ENST00000229251.3|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000539735.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000538410.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A
hg19_v2_chr15_+_93749295_93749295	0.287801	HOXD11_HOXA11	ENST00000599897.1|AC112693.2|ENSG00000269360.1|AC112693.2
hg19_v2_chr22_+_21133469_21133469	0.286513	HOXD11_HOXA11	ENST00000406799.1|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr19_-_53636125_53636178	0.285757	HOXD11_HOXA11	ENST00000601493.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000599261.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000597503.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000500065.4|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000243643.4|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000594011.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000455735.2|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000595193.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000448501.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000421033.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000440291.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000595813.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000600574.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000596051.1|ZNF415|ENSG00000170954.7|zinc finger protein 415 	ENST00000601110.1|ZNF415|ENSG00000170954.7|zinc finger protein 415
hg19_v2_chr6_+_42584847_42584878	0.285043	HOXD11_HOXA11	ENST00000372883.3|UBR2|ENSG00000024048.6|ubiquitin protein ligase E3 component n-recognin 2
hg19_v2_chr18_+_29769978_29769989	0.283582	HOXD11_HOXA11	ENST00000269202.6|MEP1B|ENSG00000141434.7|meprin A, beta 	ENST00000581447.1|MEP1B|ENSG00000141434.7|meprin A, beta
hg19_v2_chr8_-_124749609_124749658	0.281486	HOXD11_HOXA11	ENST00000262219.6|ANXA13|ENSG00000104537.12|annexin A13 	ENST00000419625.1|ANXA13|ENSG00000104537.12|annexin A13
hg19_v2_chr17_-_55911970_55912121	0.280082	HOXD11_HOXA11	ENST00000581805.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3	ENST00000580960.1|RP11-60A24.3|ENSG00000265542.1|RP11-60A24.3
hg19_v2_chr18_-_19994830_19994830	0.279273	HOXD11_HOXA11	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr7_-_75401513_75401575	0.278687	HOXD11_HOXA11	ENST00000005180.4|CCL26|ENSG00000006606.4|chemokine (C-C motif) ligand 26
hg19_v2_chr3_-_150690471_150690520	0.278326	HOXD11_HOXA11	ENST00000468836.1|CLRN1|ENSG00000163646.6|clarin 1 	ENST00000328863.4|CLRN1|ENSG00000163646.6|clarin 1
hg19_v2_chr10_-_90751038_90751147	0.276216	HOXD11_HOXA11	ENST00000458159.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta 	ENST00000415557.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta 	ENST00000458208.1|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr13_-_47471155_47471214	0.275625	HOXD11_HOXA11	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr1_-_182369751_182369777	0.274323	HOXD11_HOXA11	ENST00000367565.1|TEDDM1|ENSG00000203730.2|transmembrane epididymal protein 1
hg19_v2_chr4_-_74964904_74965010	0.273553	HOXD11_HOXA11	ENST00000508487.2|CXCL2|ENSG00000081041.8|chemokine (C-X-C motif) ligand 2
hg19_v2_chr9_-_95640218_95640345	0.270946	HOXD11_HOXA11	ENST00000395506.3|ZNF484|ENSG00000127081.9|zinc finger protein 484 	ENST00000375495.3|ZNF484|ENSG00000127081.9|zinc finger protein 484 	ENST00000332591.6|ZNF484|ENSG00000127081.9|zinc finger protein 484
hg19_v2_chr20_+_37554955_37555067	0.267622	HOXD11_HOXA11	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr6_+_12007963_12008103	0.266814	HOXD11_HOXA11	ENST00000607445.1|RP11-456H18.2|ENSG00000229896.2|RP11-456H18.2
hg19_v2_chr9_-_114521783_114521822	0.264164	HOXD11_HOXA11	ENST00000394779.3|C9orf84|ENSG00000165181.12|chromosome 9 open reading frame 84 	ENST00000394777.4|C9orf84|ENSG00000165181.12|chromosome 9 open reading frame 84
hg19_v2_chrX_+_78003204_78003248	0.263449	HOXD11_HOXA11	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr18_+_45778672_45778672	0.26163	HOXD11_HOXA11	ENST00000600091.1|AC091150.1|ENSG00000268960.1|HCG1818186; Uncharacterized protein
hg19_v2_chr5_-_20575959_20575997	0.258815	HOXD11_HOXA11	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr1_-_89664595_89664636	0.258455	HOXD11_HOXA11	ENST00000355754.6|GBP4|ENSG00000162654.8|guanylate binding protein 4
hg19_v2_chr7_-_69062391_69062434	0.257725	HOXD11_HOXA11	ENST00000436600.2|RP5-942I16.1|ENSG00000234215.2|RP5-942I16.1
hg19_v2_chr5_+_67586465_67586534	0.256371	HOXD11_HOXA11	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr22_-_39190116_39190203	0.250811	HOXD11_HOXA11	ENST00000406622.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000216068.4|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4 	ENST00000406199.3|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4
hg19_v2_chr17_+_51900239_51900312	0.250434	HOXD11_HOXA11	ENST00000268919.4|KIF2B|ENSG00000141200.6|kinesin family member 2B
hg19_v2_chr9_+_125132803_125132835	0.248992	HOXD11_HOXA11	ENST00000540753.1|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr10_+_85933494_85933568	0.246681	HOXD11_HOXA11	ENST00000372126.3|C10orf99|ENSG00000188373.4|chromosome 10 open reading frame 99
hg19_v2_chr11_-_117748138_117748201	0.246312	HOXD11_HOXA11	ENST00000527717.1|FXYD6|ENSG00000137726.11|FXYD domain containing ion transport regulator 6
hg19_v2_chr3_-_151034734_151034745	0.241494	HOXD11_HOXA11	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr11_-_5207612_5207612	0.23426	HOXD11_HOXA11	ENST00000380367.1|OR52A1|ENSG00000182070.4|olfactory receptor, family 52, subfamily A, member 1
hg19_v2_chr12_+_12878829_12878871	0.23419	HOXD11_HOXA11	ENST00000326765.6|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr9_-_130829588_130829636	0.23404	HOXD11_HOXA11	ENST00000373078.4|NAIF1|ENSG00000171169.8|nuclear apoptosis inducing factor 1
hg19_v2_chr14_-_21567009_21567173	0.232354	HOXD11_HOXA11	ENST00000556174.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000554478.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000553980.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000421093.2|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr8_+_31497271_31497285	0.231972	HOXD11_HOXA11	ENST00000520407.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr10_+_91087651_91087732	0.231697	HOXD11_HOXA11	ENST00000371818.4|IFIT3|ENSG00000119917.9|interferon-induced protein with tetratricopeptide repeats 3
hg19_v2_chr7_+_141695633_141695642	0.231623	HOXD11_HOXA11	ENST00000549489.2|MGAM|ENSG00000257335.4|maltase-glucoamylase (alpha-glucosidase)
hg19_v2_chr7_+_141695671_141695688	0.231174	HOXD11_HOXA11	ENST00000497673.1|MGAM|ENSG00000257335.4|maltase-glucoamylase (alpha-glucosidase) 	ENST00000475668.2|MGAM|ENSG00000257335.4|maltase-glucoamylase (alpha-glucosidase)
hg19_v2_chr15_-_85197501_85197566	0.229985	HOXD11_HOXA11	ENST00000434634.2|WDR73|ENSG00000177082.8|WD repeat domain 73
hg19_v2_chr4_-_95264008_95264035	0.229734	HOXD11_HOXA11	ENST00000295256.5|HPGDS|ENSG00000163106.6|hematopoietic prostaglandin D synthase
hg19_v2_chr22_-_30642782_30642840	0.227819	HOXD11_HOXA11	ENST00000249075.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr10_+_24497704_24497743	0.226088	HOXD11_HOXA11	ENST00000376456.4|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000458595.1|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr2_+_89986318_89986323	0.224771	HOXD11_HOXA11	ENST00000491977.1|IGKV2D-29|ENSG00000243264.1|immunoglobulin kappa variable 2D-29
hg19_v2_chr6_-_119031228_119031261	0.22228	HOXD11_HOXA11	ENST00000392500.3|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like 	ENST00000368488.5|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like 	ENST00000434604.1|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like
hg19_v2_chr8_+_124084899_124085018	0.220679	HOXD11_HOXA11	ENST00000287380.1|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000309336.3|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000519418.1|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000327098.5|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000522420.1|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000521676.1|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31 	ENST00000378080.2|TBC1D31|ENSG00000156787.12|TBC1 domain family, member 31
hg19_v2_chr16_+_57653989_57654022	0.220621	HOXD11_HOXA11	ENST00000567835.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000569372.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000563548.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562003.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr7_-_36764004_36764059	0.219463	HOXD11_HOXA11	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr15_-_98417780_98417780	0.218598	HOXD11_HOXA11	ENST00000503874.3|LINC00923|ENSG00000251209.3|long intergenic non-protein coding RNA 923
hg19_v2_chr16_+_57653854_57653968	0.215523	HOXD11_HOXA11	ENST00000568908.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000568909.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566778.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000561988.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr14_-_61748550_61748559	0.214114	HOXD11_HOXA11	ENST00000555868.1|TMEM30B|ENSG00000182107.5|transmembrane protein 30B
hg19_v2_chr10_-_129691195_129691212	0.210273	HOXD11_HOXA11	ENST00000368671.3|CLRN3|ENSG00000180745.4|clarin 3
hg19_v2_chr4_+_119810134_119810192	0.208581	HOXD11_HOXA11	ENST00000434046.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr1_+_120254510_120254571	0.208115	HOXD11_HOXA11	ENST00000369409.4|PHGDH|ENSG00000092621.7|phosphoglycerate dehydrogenase
hg19_v2_chr15_-_54025300_54025380	0.206388	HOXD11_HOXA11	ENST00000559418.1|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr4_+_71457970_71457974	0.205475	HOXD11_HOXA11	ENST00000322937.6|AMBN|ENSG00000178522.10|ameloblastin (enamel matrix protein)
hg19_v2_chr3_-_57326704_57326721	0.204932	HOXD11_HOXA11	ENST00000487349.1|ASB14|ENSG00000239388.4|ankyrin repeat and SOCS box containing 14 	ENST00000389601.3|ASB14|ENSG00000239388.4|ankyrin repeat and SOCS box containing 14
hg19_v2_chr3_-_108672742_108672763	0.204721	HOXD11_HOXA11	ENST00000261047.3|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C
hg19_v2_chr8_-_13372253_13372282	0.204078	HOXD11_HOXA11	ENST00000316609.5|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr17_-_39203519_39203568	0.203886	HOXD11_HOXA11	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr4_-_47983519_47983583	0.197071	HOXD11_HOXA11	ENST00000358519.4|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000544810.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000402813.3|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr1_+_153004800_153004822	0.196469	HOXD11_HOXA11	ENST00000392661.3|SPRR1B|ENSG00000169469.7|small proline-rich protein 1B
hg19_v2_chr15_-_99789736_99789820	0.196142	HOXD11_HOXA11	ENST00000560235.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394132.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560860.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558078.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394136.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000262074.4|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558613.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394130.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560772.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr12_-_95941987_95942048	0.193898	HOXD11_HOXA11	ENST00000537435.2|USP44|ENSG00000136014.7|ubiquitin specific peptidase 44
hg19_v2_chr3_-_108672609_108672636	0.193144	HOXD11_HOXA11	ENST00000393963.3|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C 	ENST00000471108.1|GUCA1C|ENSG00000138472.6|guanylate cyclase activator 1C
hg19_v2_chr19_-_19626838_19626991	0.189926	HOXD11_HOXA11	ENST00000360913.3|TSSK6|ENSG00000178093.12|testis-specific serine kinase 6
hg19_v2_chr5_-_75008244_75008286	0.189351	HOXD11_HOXA11	ENST00000510798.1|POC5|ENSG00000152359.10|POC5 centriolar protein 	ENST00000446329.2|POC5|ENSG00000152359.10|POC5 centriolar protein
hg19_v2_chr9_-_21305312_21305312	0.188462	HOXD11_HOXA11	ENST00000259555.4|IFNA5|ENSG00000147873.4|interferon, alpha 5
hg19_v2_chr17_-_28257080_28257294	0.187967	HOXD11_HOXA11	ENST00000579954.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000540801.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000269033.3|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000590153.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000582084.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2
hg19_v2_chr17_+_41132564_41132600	0.187704	HOXD11_HOXA11	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr3_+_173116225_173116242	0.187306	HOXD11_HOXA11	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr11_-_3663502_3663546	0.186644	HOXD11_HOXA11	ENST00000359918.4|ART5|ENSG00000167311.9|ADP-ribosyltransferase 5
hg19_v2_chr8_-_72274095_72274116	0.184934	HOXD11_HOXA11	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr6_+_12717892_12717903	0.184447	HOXD11_HOXA11	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr3_+_155838337_155838382	0.183988	HOXD11_HOXA11	ENST00000490337.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1 	ENST00000389636.5|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
hg19_v2_chr10_-_14050522_14050584	0.182335	HOXD11_HOXA11	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr11_-_5345582_5345582	0.18091	HOXD11_HOXA11	ENST00000328813.2|OR51B2|ENSG00000184881.2|olfactory receptor, family 51, subfamily B, member 2
hg19_v2_chr11_-_3663480_3663487	0.180037	HOXD11_HOXA11	ENST00000397068.3|ART5|ENSG00000167311.9|ADP-ribosyltransferase 5
hg19_v2_chr10_+_90750493_90750634	0.179716	HOXD11_HOXA11	ENST00000357339.2|FAS|ENSG00000026103.15|Fas cell surface death receptor 	ENST00000355279.2|FAS|ENSG00000026103.15|Fas cell surface death receptor
hg19_v2_chr6_-_26189304_26189346	0.179214	HOXD11_HOXA11	ENST00000340756.2|HIST1H4D|ENSG00000188987.2|histone cluster 1, H4d
hg19_v2_chr11_+_45825616_45825645	0.179075	HOXD11_HOXA11	ENST00000442528.2|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1 	ENST00000456334.1|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1 	ENST00000526817.1|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr2_+_133874577_133874577	0.178686	HOXD11_HOXA11	ENST00000596384.1|AC011755.1|ENSG00000269686.1|HCG2006742; Protein LOC100996685
hg19_v2_chr5_-_160279207_160279247	0.178064	HOXD11_HOXA11	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr11_+_35201826_35201855	0.176924	HOXD11_HOXA11	ENST00000531873.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr9_+_77112244_77112281	0.174356	HOXD11_HOXA11	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr22_-_32651326_32651340	0.174079	HOXD11_HOXA11	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr7_-_5553369_5553445	0.173192	HOXD11_HOXA11	ENST00000453700.3|FBXL18|ENSG00000155034.14|F-box and leucine-rich repeat protein 18 	ENST00000382368.3|FBXL18|ENSG00000155034.14|F-box and leucine-rich repeat protein 18
hg19_v2_chr19_+_41281282_41281363	0.172675	HOXD11_HOXA11	ENST00000263369.3|MIA|ENSG00000261857.2|melanoma inhibitory activity
hg19_v2_chr19_+_1440838_1440838	0.172529	HOXD11_HOXA11	ENST00000594262.1|AC027307.3|ENSG00000268798.1|Uncharacterized protein
hg19_v2_chr6_-_87804815_87804830	0.172349	HOXD11_HOXA11	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chrX_+_144908928_144908928	0.170974	HOXD11_HOXA11	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chrX_+_37865804_37865842	0.169746	HOXD11_HOXA11	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr1_-_106161540_106161580	0.169173	HOXD11_HOXA11	ENST00000420901.1|RP11-251P6.1|ENSG00000230768.3|RP11-251P6.1	ENST00000610126.1|RP11-251P6.1|ENSG00000230768.3|RP11-251P6.1	ENST00000435253.2|RP11-251P6.1|ENSG00000230768.3|RP11-251P6.1
hg19_v2_chr18_-_74728998_74729051	0.167874	HOXD11_HOXA11	ENST00000359645.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397875.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397869.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578193.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578873.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397866.4|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000528160.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000527041.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000526111.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397865.5|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000382582.3|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr2_+_69201705_69201776	0.167647	HOXD11_HOXA11	ENST00000377938.2|GKN1|ENSG00000169605.5|gastrokine 1
hg19_v2_chr1_+_26485511_26485551	0.167494	HOXD11_HOXA11	ENST00000374268.3|FAM110D|ENSG00000197245.4|family with sequence similarity 110, member D
hg19_v2_chr15_+_69857515_69857531	0.166678	HOXD11_HOXA11	ENST00000559477.1|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr17_+_58018269_58018269	0.164932	HOXD11_HOXA11	ENST00000591035.1|RP11-178C3.1|ENSG00000267318.1|Uncharacterized protein
hg19_v2_chr9_+_21967137_21967137	0.16473	HOXD11_HOXA11	ENST00000441769.2|C9orf53|ENSG00000224854.2|chromosome 9 open reading frame 53
hg19_v2_chr14_+_73563735_73563751	0.164678	HOXD11_HOXA11	ENST00000532192.1|RBM25|ENSG00000119707.9|RNA binding motif protein 25
hg19_v2_chr19_-_53770972_53770972	0.164537	HOXD11_HOXA11	ENST00000311170.4|VN1R4|ENSG00000228567.2|vomeronasal 1 receptor 4
hg19_v2_chr7_-_77045617_77045737	0.162182	HOXD11_HOXA11	ENST00000257626.7|GSAP|ENSG00000186088.11|gamma-secretase activating protein
hg19_v2_chr1_+_241695424_241695440	0.161925	HOXD11_HOXA11	ENST00000366558.3|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) 	ENST00000366559.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr4_-_68749699_68749725	0.161716	HOXD11_HOXA11	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr10_-_62493223_62493293	0.160588	HOXD11_HOXA11	ENST00000373827.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr12_-_49418407_49418407	0.159722	HOXD11_HOXA11	ENST00000526209.1|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr12_+_82347498_82347593	0.158666	HOXD11_HOXA11	ENST00000550506.1|RP11-362A1.1|ENSG00000257747.1|RP11-362A1.1
hg19_v2_chr3_-_108476231_108476257	0.157869	HOXD11_HOXA11	ENST00000295755.6|RETNLB|ENSG00000163515.6|resistin like beta
hg19_v2_chr12_-_30887948_30887997	0.15752	HOXD11_HOXA11	ENST00000433722.2|CAPRIN2|ENSG00000110888.13|caprin family member 2
hg19_v2_chr7_+_26591441_26591515	0.156673	HOXD11_HOXA11	ENST00000420912.1|AC004947.2|ENSG00000233760.1|AC004947.2	ENST00000457000.1|AC004947.2|ENSG00000233760.1|AC004947.2	ENST00000430426.1|AC004947.2|ENSG00000233760.1|AC004947.2
hg19_v2_chr1_+_23345943_23346051	0.156476	HOXD11_HOXA11	ENST00000400181.4|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A 	ENST00000542151.1|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A
hg19_v2_chr19_+_41281060_41281169	0.156218	HOXD11_HOXA11	ENST00000594436.1|MIA|ENSG00000261857.2|melanoma inhibitory activity 	ENST00000597784.1|MIA|ENSG00000261857.2|melanoma inhibitory activity
hg19_v2_chr6_+_29274403_29274403	0.15619	HOXD11_HOXA11	ENST00000377160.2|OR14J1|ENSG00000204695.2|olfactory receptor, family 14, subfamily J, member 1
hg19_v2_chr1_+_23345930_23345941	0.15554	HOXD11_HOXA11	ENST00000356634.3|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A
hg19_v2_chr9_+_95736758_95736771	0.155071	HOXD11_HOXA11	ENST00000337352.6|FGD3|ENSG00000127084.13|FYVE, RhoGEF and PH domain containing 3
hg19_v2_chr11_-_36619771_36619793	0.154383	HOXD11_HOXA11	ENST00000311485.3|RAG2|ENSG00000175097.3|recombination activating gene 2 	ENST00000527033.1|RAG2|ENSG00000175097.3|recombination activating gene 2 	ENST00000532616.1|RAG2|ENSG00000175097.3|recombination activating gene 2
hg19_v2_chr17_+_73717516_73717550	0.154272	HOXD11_HOXA11	ENST00000200181.3|ITGB4|ENSG00000132470.9|integrin, beta 4 	ENST00000339591.3|ITGB4|ENSG00000132470.9|integrin, beta 4
hg19_v2_chr15_-_50558223_50558263	0.153648	HOXD11_HOXA11	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr10_+_17794251_17794260	0.152651	HOXD11_HOXA11	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr12_+_70219052_70219096	0.152478	HOXD11_HOXA11	ENST00000552032.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like 	ENST00000547771.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like
hg19_v2_chr1_-_237167718_237167718	0.152447	HOXD11_HOXA11	ENST00000464121.2|MT1HL1|ENSG00000244020.2|metallothionein 1H-like 1
hg19_v2_chr1_-_68962805_68962904	0.151603	HOXD11_HOXA11	ENST00000370966.5|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr6_-_9939552_9939552	0.151238	HOXD11_HOXA11	ENST00000460363.2|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr6_+_158733692_158733692	0.150014	HOXD11_HOXA11	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr10_-_29084886_29085042	0.149919	HOXD11_HOXA11	ENST00000608061.1|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837 	ENST00000443246.2|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837 	ENST00000446012.1|LINC00837|ENSG00000235824.3|long intergenic non-protein coding RNA 837
hg19_v2_chr13_-_103719196_103719196	0.14949	HOXD11_HOXA11	ENST00000245312.3|SLC10A2|ENSG00000125255.5|solute carrier family 10 (sodium/bile acid cotransporter), member 2
hg19_v2_chr12_-_6579808_6579819	0.148803	HOXD11_HOXA11	ENST00000535180.1|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1) 	ENST00000400911.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr4_-_84035905_84035955	0.147931	HOXD11_HOXA11	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr6_-_22297730_22297730	0.14773	HOXD11_HOXA11	ENST00000306482.1|PRL|ENSG00000172179.7|prolactin
hg19_v2_chr16_-_30381580_30381633	0.146292	HOXD11_HOXA11	ENST00000409939.3|TBC1D10B|ENSG00000169221.9|TBC1 domain family, member 10B
hg19_v2_chr12_-_101604185_101604185	0.146128	HOXD11_HOXA11	ENST00000536262.2|SLC5A8|ENSG00000256870.2|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
hg19_v2_chr7_+_73106926_73106980	0.146019	HOXD11_HOXA11	ENST00000453316.1|WBSCR22|ENSG00000071462.7|Williams Beuren syndrome chromosome region 22
hg19_v2_chr2_-_190044480_190044605	0.145632	HOXD11_HOXA11	ENST00000374866.3|COL5A2|ENSG00000204262.7|collagen, type V, alpha 2
hg19_v2_chr6_+_12007897_12007910	0.144633	HOXD11_HOXA11	ENST00000437559.1|RP11-456H18.2|ENSG00000229896.2|RP11-456H18.2
hg19_v2_chr10_+_96522361_96522381	0.144307	HOXD11_HOXA11	ENST00000371321.3|CYP2C19|ENSG00000165841.5|cytochrome P450, family 2, subfamily C, polypeptide 19
hg19_v2_chr5_-_59783882_59783910	0.143331	HOXD11_HOXA11	ENST00000505507.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000502484.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr17_-_7232585_7232712	0.143313	HOXD11_HOXA11	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr1_-_89736434_89736546	0.142999	HOXD11_HOXA11	ENST00000370459.3|GBP5|ENSG00000154451.10|guanylate binding protein 5
hg19_v2_chr12_+_75728419_75728476	0.142857	HOXD11_HOXA11	ENST00000378695.4|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1 	ENST00000312442.2|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1
hg19_v2_chr4_-_68749745_68749756	0.142536	HOXD11_HOXA11	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr14_+_97925151_97925207	0.142481	HOXD11_HOXA11	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr8_-_7220490_7220490	0.142046	HOXD11_HOXA11	ENST00000400078.2|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr11_+_125774362_125774564	0.142006	HOXD11_HOXA11	ENST00000530414.1|DDX25|ENSG00000109832.8|DEAD (Asp-Glu-Ala-Asp) box helicase 25 	ENST00000530129.2|DDX25|ENSG00000109832.8|DEAD (Asp-Glu-Ala-Asp) box helicase 25
hg19_v2_chr18_+_61575200_61575230	0.140692	HOXD11_HOXA11	ENST00000238508.3|SERPINB10|ENSG00000242550.1|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg19_v2_chr2_+_190541153_190541177	0.139562	HOXD11_HOXA11	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr20_-_5426332_5426373	0.138682	HOXD11_HOXA11	ENST00000420529.1|LINC00658|ENSG00000226995.3|long intergenic non-protein coding RNA 658
hg19_v2_chr6_+_131571535_131571595	0.138454	HOXD11_HOXA11	ENST00000474850.2|AKAP7|ENSG00000118507.11|A kinase (PRKA) anchor protein 7
hg19_v2_chr4_+_86396265_86396276	0.137776	HOXD11_HOXA11	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr1_-_161207875_161207901	0.137591	HOXD11_HOXA11	ENST00000512372.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000437437.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000442691.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000412844.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000428574.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000505005.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508740.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508387.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000504010.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511676.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000502985.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367981.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000515621.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511944.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511748.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367984.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367985.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_-_152386732_152386745	0.137442	HOXD11_HOXA11	ENST00000271835.3|CRNN|ENSG00000143536.7|cornulin
hg19_v2_chr17_+_17082842_17082884	0.137269	HOXD11_HOXA11	ENST00000579361.1|MPRIP|ENSG00000133030.15|myosin phosphatase Rho interacting protein
hg19_v2_chr3_+_107602030_107602095	0.136568	HOXD11_HOXA11	ENST00000494231.1|LINC00636|ENSG00000240423.1|long intergenic non-protein coding RNA 636
hg19_v2_chr4_-_84035868_84035897	0.136388	HOXD11_HOXA11	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr3_+_111260856_111260948	0.136256	HOXD11_HOXA11	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr4_+_71248795_71248854	0.135998	HOXD11_HOXA11	ENST00000304915.3|SMR3B|ENSG00000171201.6|submaxillary gland androgen regulated protein 3B
hg19_v2_chr19_+_41281416_41281452	0.134569	HOXD11_HOXA11	ENST00000597140.1|MIA|ENSG00000261857.2|melanoma inhibitory activity
hg19_v2_chr6_+_27782788_27782823	0.134163	HOXD11_HOXA11	ENST00000359465.4|HIST1H2BM|ENSG00000196374.5|histone cluster 1, H2bm
hg19_v2_chr3_-_190167571_190167665	0.134015	HOXD11_HOXA11	ENST00000354905.2|TMEM207|ENSG00000198398.2|transmembrane protein 207
hg19_v2_chr7_+_129984630_129984701	0.133024	HOXD11_HOXA11	ENST00000355388.3|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000497503.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000463587.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000461828.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000494311.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000466363.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000485477.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000431780.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000474905.1|CPA5|ENSG00000158525.11|carboxypeptidase A5
hg19_v2_chr10_-_50970322_50970381	0.132686	HOXD11_HOXA11	ENST00000374103.4|OGDHL|ENSG00000197444.5|oxoglutarate dehydrogenase-like
hg19_v2_chr4_+_70146217_70146217	0.131806	HOXD11_HOXA11	ENST00000335568.5|UGT2B28|ENSG00000135226.12|UDP glucuronosyltransferase 2 family, polypeptide B28 	ENST00000511240.1|UGT2B28|ENSG00000135226.12|UDP glucuronosyltransferase 2 family, polypeptide B28
hg19_v2_chr19_+_50084561_50084603	0.131693	HOXD11_HOXA11	ENST00000246794.5|PRRG2|ENSG00000126460.6|proline rich Gla (G-carboxyglutamic acid) 2
hg19_v2_chr9_+_131549610_131549629	0.131316	HOXD11_HOXA11	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr4_-_101111615_101111632	0.130708	HOXD11_HOXA11	ENST00000273990.2|DDIT4L|ENSG00000145358.2|DNA-damage-inducible transcript 4-like
hg19_v2_chr2_-_136288113_136288301	0.130378	HOXD11_HOXA11	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chr11_-_62359027_62359109	0.129923	HOXD11_HOXA11	ENST00000494385.1|TUT1|ENSG00000149016.11|terminal uridylyl transferase 1, U6 snRNA-specific 	ENST00000308436.7|TUT1|ENSG00000149016.11|terminal uridylyl transferase 1, U6 snRNA-specific
hg19_v2_chr11_-_27723158_27723188	0.129568	HOXD11_HOXA11	ENST00000395980.2|BDNF|ENSG00000176697.14|brain-derived neurotrophic factor
hg19_v2_chr3_+_63428752_63428777	0.129157	HOXD11_HOXA11	ENST00000295894.5|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr22_+_30477000_30477000	0.128254	HOXD11_HOXA11	ENST00000403975.1|HORMAD2|ENSG00000176635.13|HORMA domain containing 2
hg19_v2_chr12_+_101188718_101188745	0.127821	HOXD11_HOXA11	ENST00000299222.9|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392977.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr2_-_228497888_228498036	0.126988	HOXD11_HOXA11	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chr2_+_28718921_28718986	0.126932	HOXD11_HOXA11	ENST00000327757.5|PLB1|ENSG00000163803.8|phospholipase B1 	ENST00000422425.2|PLB1|ENSG00000163803.8|phospholipase B1 	ENST00000404858.1|PLB1|ENSG00000163803.8|phospholipase B1
hg19_v2_chr9_+_125133315_125133359	0.126435	HOXD11_HOXA11	ENST00000223423.4|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 	ENST00000362012.2|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr12_-_12837423_12837501	0.126363	HOXD11_HOXA11	ENST00000540510.1|GPR19|ENSG00000183150.3|G protein-coupled receptor 19
hg19_v2_chr1_+_89246647_89246728	0.125203	HOXD11_HOXA11	ENST00000544045.1|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr10_+_94352956_94353043	0.124993	HOXD11_HOXA11	ENST00000260731.3|KIF11|ENSG00000138160.4|kinesin family member 11
hg19_v2_chr11_+_34664014_34664174	0.124856	HOXD11_HOXA11	ENST00000527935.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr1_+_11539204_11539295	0.124805	HOXD11_HOXA11	ENST00000294484.6|PTCHD2|ENSG00000204624.6|patched domain containing 2 	ENST00000389575.3|PTCHD2|ENSG00000204624.6|patched domain containing 2
hg19_v2_chr12_-_62586543_62586623	0.123462	HOXD11_HOXA11	ENST00000416284.3|FAM19A2|ENSG00000198673.6|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v2_chr8_+_77593448_77593471	0.123459	HOXD11_HOXA11	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr8_-_110346614_110346722	0.123154	HOXD11_HOXA11	ENST00000239690.4|NUDCD1|ENSG00000120526.6|NudC domain containing 1
hg19_v2_chr12_-_6579833_6579850	0.122908	HOXD11_HOXA11	ENST00000396308.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr14_+_77564440_77564685	0.122876	HOXD11_HOXA11	ENST00000361786.2|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000555437.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000555611.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000554658.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker
hg19_v2_chr8_+_110099653_110099653	0.122294	HOXD11_HOXA11	ENST00000311762.2|TRHR|ENSG00000174417.2|thyrotropin-releasing hormone receptor
hg19_v2_chr1_-_151148442_151148469	0.122079	HOXD11_HOXA11	ENST00000441701.1|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle) 	ENST00000416280.2|TMOD4|ENSG00000163157.10|tropomodulin 4 (muscle)
hg19_v2_chr17_-_8021710_8021831	0.121103	HOXD11_HOXA11	ENST00000380149.1|ALOXE3|ENSG00000179148.5|arachidonate lipoxygenase 3 	ENST00000448843.2|ALOXE3|ENSG00000179148.5|arachidonate lipoxygenase 3
hg19_v2_chr12_-_91573132_91573245	0.120039	HOXD11_HOXA11	ENST00000550563.1|DCN|ENSG00000011465.12|decorin 	ENST00000546370.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr7_+_23719749_23719834	0.119413	HOXD11_HOXA11	ENST00000409192.3|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000344962.4|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000409653.1|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A 	ENST00000409994.3|FAM221A|ENSG00000188732.6|family with sequence similarity 221, member A
hg19_v2_chr5_-_36301984_36302010	0.119409	HOXD11_HOXA11	ENST00000502994.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000515759.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000296604.3|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like
hg19_v2_chr6_+_26365443_26365503	0.119329	HOXD11_HOXA11	ENST00000527422.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000356386.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396934.3|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000377708.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396948.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000508906.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2
hg19_v2_chr1_-_89591749_89591816	0.119234	HOXD11_HOXA11	ENST00000370466.3|GBP2|ENSG00000162645.8|guanylate binding protein 2, interferon-inducible
hg19_v2_chr15_+_91411810_91411828	0.118877	HOXD11_HOXA11	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr9_-_123812542_123812560	0.118612	HOXD11_HOXA11	ENST00000223642.1|C5|ENSG00000106804.6|complement component 5
hg19_v2_chr12_-_52828147_52828309	0.11833	HOXD11_HOXA11	ENST00000252245.5|KRT75|ENSG00000170454.5|keratin 75
hg19_v2_chr6_+_153071925_153071939	0.118042	HOXD11_HOXA11	ENST00000367244.3|VIP|ENSG00000146469.8|vasoactive intestinal peptide 	ENST00000367243.3|VIP|ENSG00000146469.8|vasoactive intestinal peptide
hg19_v2_chr8_+_1993173_1993199	0.11754	HOXD11_HOXA11	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr8_+_77593474_77593612	0.117145	HOXD11_HOXA11	ENST00000455469.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4 	ENST00000050961.6|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr12_-_11214893_11214893	0.116801	HOXD11_HOXA11	ENST00000533467.1|TAS2R46|ENSG00000226761.3|taste receptor, type 2, member 46
hg19_v2_chr2_+_220143989_220144016	0.116531	HOXD11_HOXA11	ENST00000336576.5|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2
hg19_v2_chr11_+_93479588_93479651	0.114962	HOXD11_HOXA11	ENST00000526335.1|C11orf54|ENSG00000182919.10|chromosome 11 open reading frame 54
hg19_v2_chr15_+_66797455_66797483	0.114948	HOXD11_HOXA11	ENST00000446801.2|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr12_-_6580094_6580153	0.114383	HOXD11_HOXA11	ENST00000361716.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr4_+_70894130_70894188	0.113769	HOXD11_HOXA11	ENST00000526767.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000530128.1|HTN3|ENSG00000205649.3|histatin 3 	ENST00000381057.3|HTN3|ENSG00000205649.3|histatin 3
hg19_v2_chr1_-_161207953_161207975	0.113387	HOXD11_HOXA11	ENST00000367982.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr4_+_39046615_39046680	0.112797	HOXD11_HOXA11	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chr6_+_131958436_131958525	0.112746	HOXD11_HOXA11	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr17_-_71410794_71410794	0.112151	HOXD11_HOXA11	ENST00000424778.1|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2
hg19_v2_chr9_-_28670283_28670283	0.111236	HOXD11_HOXA11	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chr20_-_44144249_44144274	0.111128	HOXD11_HOXA11	ENST00000217428.6|SPINT3|ENSG00000101446.7|serine peptidase inhibitor, Kunitz type, 3
hg19_v2_chr1_+_948803_948885	0.111013	HOXD11_HOXA11	ENST00000379389.4|ISG15|ENSG00000187608.5|ISG15 ubiquitin-like modifier
hg19_v2_chr9_+_133285948_133285948	0.110556	HOXD11_HOXA11	ENST00000428715.1|HMCN2|ENSG00000148357.12|hemicentin 2
hg19_v2_chr5_-_115872142_115872154	0.110361	HOXD11_HOXA11	ENST00000510263.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr15_-_41166414_41166487	0.110248	HOXD11_HOXA11	ENST00000220507.4|RHOV|ENSG00000104140.6|ras homolog family member V
hg19_v2_chr1_-_161208013_161208092	0.109789	HOXD11_HOXA11	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr21_+_33671160_33671172	0.108808	HOXD11_HOXA11	ENST00000303645.5|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr5_-_65017921_65017968	0.108766	HOXD11_HOXA11	ENST00000381007.4|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr2_+_170440844_170440897	0.108526	HOXD11_HOXA11	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr6_-_116447283_116447325	0.108452	HOXD11_HOXA11	ENST00000452729.1|COL10A1|ENSG00000123500.5|collagen, type X, alpha 1 	ENST00000243222.4|COL10A1|ENSG00000123500.5|collagen, type X, alpha 1
hg19_v2_chr8_-_90996459_90996632	0.108436	HOXD11_HOXA11	ENST00000517337.1|NBN|ENSG00000104320.9|nibrin 	ENST00000409330.1|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr9_+_74920408_74920433	0.108215	HOXD11_HOXA11	ENST00000451152.1|RP11-63P12.6|ENSG00000225434.2|RP11-63P12.6
hg19_v2_chr7_-_112635675_112635720	0.107895	HOXD11_HOXA11	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr11_-_26593677_26593708	0.107889	HOXD11_HOXA11	ENST00000527569.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr11_+_34645791_34645836	0.107706	HOXD11_HOXA11	ENST00000529527.1|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000531728.1|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000525253.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr13_+_109248500_109248524	0.106233	HOXD11_HOXA11	ENST00000356711.2|MYO16|ENSG00000041515.11|myosin XVI
hg19_v2_chr6_+_153552455_153552455	0.106061	HOXD11_HOXA11	ENST00000392385.2|AL590867.1|ENSG00000213121.2|Uncharacterized protein; cDNA FLJ59044, highly similar to LINE-1 reverse transcriptase homolog
hg19_v2_chr5_+_167913450_167913496	0.106018	HOXD11_HOXA11	ENST00000231572.3|RARS|ENSG00000113643.4|arginyl-tRNA synthetase 	ENST00000538719.1|RARS|ENSG00000113643.4|arginyl-tRNA synthetase
hg19_v2_chr8_-_95220775_95220820	0.105721	HOXD11_HOXA11	ENST00000441892.2|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine) 	ENST00000521491.1|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine) 	ENST00000027335.3|CDH17|ENSG00000079112.5|cadherin 17, LI cadherin (liver-intestine)
hg19_v2_chr14_-_57272366_57272391	0.105652	HOXD11_HOXA11	ENST00000554788.1|OTX2|ENSG00000165588.12|orthodenticle homeobox 2 	ENST00000554845.1|OTX2|ENSG00000165588.12|orthodenticle homeobox 2 	ENST00000408990.3|OTX2|ENSG00000165588.12|orthodenticle homeobox 2
hg19_v2_chr2_+_220144052_220144128	0.105584	HOXD11_HOXA11	ENST00000425450.1|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENST00000392086.4|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENST00000421532.1|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2
hg19_v2_chr1_-_144995002_144995057	0.105046	HOXD11_HOXA11	ENST00000369356.4|PDE4DIP|ENSG00000178104.15|phosphodiesterase 4D interacting protein
hg19_v2_chr17_-_42580738_42580798	0.105012	HOXD11_HOXA11	ENST00000585614.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000591680.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000434000.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000588554.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000592154.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8
hg19_v2_chr4_+_71263599_71263668	0.104987	HOXD11_HOXA11	ENST00000399575.2|PROL1|ENSG00000171199.5|proline rich, lacrimal 1
hg19_v2_chr6_+_26156551_26156564	0.104839	HOXD11_HOXA11	ENST00000304218.3|HIST1H1E|ENSG00000168298.4|histone cluster 1, H1e
hg19_v2_chr4_-_39979576_39979588	0.104577	HOXD11_HOXA11	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chrX_+_1455478_1455515	0.103765	HOXD11_HOXA11	ENST00000331035.4|IL3RA|ENSG00000185291.6|interleukin 3 receptor, alpha (low affinity)
hg19_v2_chr7_+_108210012_108210012	0.103159	HOXD11_HOXA11	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr12_+_25205666_25205690	0.103125	HOXD11_HOXA11	ENST00000547044.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr12_+_40787194_40787197	0.102654	HOXD11_HOXA11	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr4_+_187187098_187187127	0.102544	HOXD11_HOXA11	ENST00000403665.2|F11|ENSG00000088926.9|coagulation factor XI 	ENST00000264692.4|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr8_+_145064215_145064232	0.100638	HOXD11_HOXA11	ENST00000313269.5|GRINA|ENSG00000178719.12|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)
hg19_v2_chr15_-_76304731_76304785	0.100426	HOXD11_HOXA11	ENST00000394907.3|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr1_+_197237352_197237543	0.0995603	HOXD11_HOXA11	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr12_-_118796910_118796943	0.0984207	HOXD11_HOXA11	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr4_+_71226468_71226484	0.0978511	HOXD11_HOXA11	ENST00000226460.4|SMR3A|ENSG00000109208.4|submaxillary gland androgen regulated protein 3A
hg19_v2_chr1_-_161207986_161208000	0.0972345	HOXD11_HOXA11	ENST00000506209.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367980.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr9_+_106856831_106856920	0.096855	HOXD11_HOXA11	ENST00000303219.8|SMC2|ENSG00000136824.14|structural maintenance of chromosomes 2 	ENST00000374787.3|SMC2|ENSG00000136824.14|structural maintenance of chromosomes 2
hg19_v2_chr5_-_137610300_137610360	0.0966878	HOXD11_HOXA11	ENST00000274721.3|GFRA3|ENSG00000146013.6|GDNF family receptor alpha 3
hg19_v2_chr4_+_169013666_169013697	0.0963879	HOXD11_HOXA11	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr1_+_154401791_154401819	0.0961579	HOXD11_HOXA11	ENST00000476006.1|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr4_-_122854612_122854612	0.0960945	HOXD11_HOXA11	ENST00000264811.5|TRPC3|ENSG00000138741.6|transient receptor potential cation channel, subfamily C, member 3
hg19_v2_chr11_-_116663127_116663141	0.0960113	HOXD11_HOXA11	ENST00000433069.1|APOA5|ENSG00000110243.7|apolipoprotein A-V 	ENST00000542499.1|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr16_+_25228242_25228273	0.0943621	HOXD11_HOXA11	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr10_-_21661870_21661885	0.0942991	HOXD11_HOXA11	ENST00000433460.1|RP11-275N1.1|ENSG00000230109.1|RP11-275N1.1
hg19_v2_chrX_-_13835147_13835224	0.0933405	HOXD11_HOXA11	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr1_+_15802594_15802601	0.0928917	HOXD11_HOXA11	ENST00000375910.3|CELA2B|ENSG00000215704.5|chymotrypsin-like elastase family, member 2B
hg19_v2_chr13_+_77522632_77522652	0.0926651	HOXD11_HOXA11	ENST00000377462.1|IRG1|ENSG00000102794.5|immunoresponsive 1 homolog (mouse)
hg19_v2_chr8_-_90996837_90996944	0.0925368	HOXD11_HOXA11	ENST00000519426.1|NBN|ENSG00000104320.9|nibrin 	ENST00000265433.3|NBN|ENSG00000104320.9|nibrin
hg19_v2_chr22_+_17956618_17956637	0.0924815	HOXD11_HOXA11	ENST00000262608.8|CECR2|ENSG00000099954.14|cat eye syndrome chromosome region, candidate 2
hg19_v2_chr7_-_130080818_130080908	0.0923788	HOXD11_HOXA11	ENST00000343969.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa 	ENST00000541543.1|CEP41|ENSG00000106477.14|centrosomal protein 41kDa 	ENST00000489512.1|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr12_+_50478977_50479040	0.0920779	HOXD11_HOXA11	ENST00000381513.4|SMARCD1|ENSG00000066117.10|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
hg19_v2_chr20_+_30102231_30102324	0.0917804	HOXD11_HOXA11	ENST00000335574.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000340852.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000398174.3|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000376127.3|HM13|ENSG00000101294.12|histocompatibility (minor) 13 	ENST00000344042.5|HM13|ENSG00000101294.12|histocompatibility (minor) 13
hg19_v2_chr8_-_22089845_22089871	0.091559	HOXD11_HOXA11	ENST00000454243.2|PHYHIP|ENSG00000168490.9|phytanoyl-CoA 2-hydroxylase interacting protein
hg19_v2_chr17_+_68071389_68071426	0.0911763	HOXD11_HOXA11	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr3_+_63428982_63429027	0.09112	HOXD11_HOXA11	ENST00000479198.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000460711.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000465156.1|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr11_-_5255861_5255888	0.0908651	HOXD11_HOXA11	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr14_-_25479811_25479846	0.0908492	HOXD11_HOXA11	ENST00000550887.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr5_-_119740532_119740564	0.0903699	HOXD11_HOXA11	ENST00000569928.1|RP11-574H6.1|ENSG00000261036.1|RP11-574H6.1
hg19_v2_chr13_+_53030107_53030147	0.0901041	HOXD11_HOXA11	ENST00000490903.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000480747.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr2_-_207023918_207023981	0.0895801	HOXD11_HOXA11	ENST00000455934.2|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000449699.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000454195.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v2_chr16_+_56899114_56899127	0.0891204	HOXD11_HOXA11	ENST00000566786.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000438926.2|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000563236.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000262502.5|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3
hg19_v2_chr4_+_86396321_86396392	0.0890275	HOXD11_HOXA11	ENST00000503995.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr3_+_130569429_130569479	0.0888337	HOXD11_HOXA11	ENST00000505330.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000504381.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000507488.2|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1 	ENST00000393221.4|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chrY_-_13524717_13524717	0.0887729	HOXD11_HOXA11	ENST00000331172.6|SLC9B1P1|ENSG00000183704.6|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 pseudogene 1
hg19_v2_chr12_-_104234966_104234984	0.0887645	HOXD11_HOXA11	ENST00000392876.3|NT5DC3|ENSG00000111696.7|5'-nucleotidase domain containing 3
hg19_v2_chr18_+_21572737_21572768	0.0885454	HOXD11_HOXA11	ENST00000304621.6|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr9_-_85678043_85678092	0.0884245	HOXD11_HOXA11	ENST00000376447.3|RASEF|ENSG00000165105.9|RAS and EF-hand domain containing 	ENST00000340717.4|RASEF|ENSG00000165105.9|RAS and EF-hand domain containing
hg19_v2_chr2_-_61245363_61245404	0.0882293	HOXD11_HOXA11	ENST00000316752.6|PUS10|ENSG00000162927.9|pseudouridylate synthase 10
hg19_v2_chr12_-_95945246_95945270	0.0880642	HOXD11_HOXA11	ENST00000258499.3|USP44|ENSG00000136014.7|ubiquitin specific peptidase 44
hg19_v2_chr5_-_35195338_35195352	0.0877956	HOXD11_HOXA11	ENST00000509839.1|PRLR|ENSG00000113494.12|prolactin receptor
hg19_v2_chrX_-_99987088_99987141	0.0875268	HOXD11_HOXA11	ENST00000372981.1|SYTL4|ENSG00000102362.11|synaptotagmin-like 4 	ENST00000263033.5|SYTL4|ENSG00000102362.11|synaptotagmin-like 4
hg19_v2_chr13_-_88323218_88323434	0.0874141	HOXD11_HOXA11	ENST00000436290.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000453832.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000606590.1|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding)
hg19_v2_chr4_+_41258786_41258962	0.0873201	HOXD11_HOXA11	ENST00000503431.1|UCHL1|ENSG00000154277.8|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 	ENST00000284440.4|UCHL1|ENSG00000154277.8|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 	ENST00000508768.1|UCHL1|ENSG00000154277.8|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 	ENST00000512788.1|UCHL1|ENSG00000154277.8|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)
hg19_v2_chr11_-_26593779_26593795	0.0871136	HOXD11_HOXA11	ENST00000529533.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr2_+_201173667_201173680	0.086352	HOXD11_HOXA11	ENST00000409755.3|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr5_+_59783941_59784066	0.0862273	HOXD11_HOXA11	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr15_-_35047166_35047204	0.0861761	HOXD11_HOXA11	ENST00000290374.4|GJD2|ENSG00000159248.4|gap junction protein, delta 2, 36kDa
hg19_v2_chr1_-_167059830_167059868	0.0861645	HOXD11_HOXA11	ENST00000367868.3|GPA33|ENSG00000143167.7|glycoprotein A33 (transmembrane)
hg19_v2_chr17_-_38545799_38545854	0.0861105	HOXD11_HOXA11	ENST00000577541.1|TOP2A|ENSG00000131747.10|topoisomerase (DNA) II alpha 170kDa
hg19_v2_chr3_+_186383741_186383809	0.0857962	HOXD11_HOXA11	ENST00000232003.4|HRG|ENSG00000113905.4|histidine-rich glycoprotein
hg19_v2_chr17_-_29624343_29624429	0.0853921	HOXD11_HOXA11	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr5_+_53751445_53751508	0.0851674	HOXD11_HOXA11	ENST00000302005.1|HSPB3|ENSG00000169271.1|heat shock 27kDa protein 3
hg19_v2_chr14_-_107049312_107049341	0.0850618	HOXD11_HOXA11	ENST00000390627.2|IGHV3-53|ENSG00000211967.2|immunoglobulin heavy variable 3-53
hg19_v2_chr8_+_117963190_117963224	0.0850416	HOXD11_HOXA11	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr2_-_163008903_163008914	0.084888	HOXD11_HOXA11	ENST00000418842.2|GCG|ENSG00000115263.10|glucagon 	ENST00000375497.3|GCG|ENSG00000115263.10|glucagon
hg19_v2_chr3_-_50329835_50329897	0.084872	HOXD11_HOXA11	ENST00000429673.2|IFRD2|ENSG00000214706.6|interferon-related developmental regulator 2
hg19_v2_chr3_-_50329990_50330026	0.0846024	HOXD11_HOXA11	ENST00000417626.2|IFRD2|ENSG00000214706.6|interferon-related developmental regulator 2
hg19_v2_chr18_-_70211691_70211774	0.0841753	HOXD11_HOXA11	ENST00000269503.4|CBLN2|ENSG00000141668.5|cerebellin 2 precursor
hg19_v2_chr9_+_140100113_140100215	0.084067	HOXD11_HOXA11	ENST00000371521.4|NDOR1|ENSG00000188566.7|NADPH dependent diflavin oxidoreductase 1 	ENST00000344894.5|NDOR1|ENSG00000188566.7|NADPH dependent diflavin oxidoreductase 1 	ENST00000427047.2|NDOR1|ENSG00000188566.7|NADPH dependent diflavin oxidoreductase 1 	ENST00000458322.2|NDOR1|ENSG00000188566.7|NADPH dependent diflavin oxidoreductase 1
hg19_v2_chr7_+_129906660_129906667	0.0839784	HOXD11_HOXA11	ENST00000222481.4|CPA2|ENSG00000158516.7|carboxypeptidase A2 (pancreatic)
hg19_v2_chr8_-_30706608_30706608	0.0839359	HOXD11_HOXA11	ENST00000256246.2|TEX15|ENSG00000133863.2|testis expressed 15
hg19_v2_chr12_-_49504623_49504639	0.0837019	HOXD11_HOXA11	ENST00000550137.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like 	ENST00000547382.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr3_+_111260954_111260977	0.0835424	HOXD11_HOXA11	ENST00000283285.5|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr11_+_61015594_61015594	0.0827382	HOXD11_HOXA11	ENST00000451616.2|PGA5|ENSG00000256713.3|pepsinogen 5, group I (pepsinogen A)
hg19_v2_chr11_-_13517565_13517728	0.0824181	HOXD11_HOXA11	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr12_-_11062161_11062161	0.0821334	HOXD11_HOXA11	ENST00000390677.2|TAS2R13|ENSG00000212128.2|taste receptor, type 2, member 13
hg19_v2_chr11_-_125648690_125648734	0.0818905	HOXD11_HOXA11	ENST00000436890.2|PATE2|ENSG00000196844.4|prostate and testis expressed 2 	ENST00000358524.3|PATE2|ENSG00000196844.4|prostate and testis expressed 2
hg19_v2_chr12_-_47219733_47219785	0.0817158	HOXD11_HOXA11	ENST00000547477.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000447411.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000266579.4|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4
hg19_v2_chr2_-_232329186_232329305	0.081193	HOXD11_HOXA11	ENST00000322723.4|NCL|ENSG00000115053.11|nucleolin
hg19_v2_chr2_-_88427568_88427635	0.0810037	HOXD11_HOXA11	ENST00000393750.3|FABP1|ENSG00000163586.5|fatty acid binding protein 1, liver 	ENST00000295834.3|FABP1|ENSG00000163586.5|fatty acid binding protein 1, liver
hg19_v2_chr6_-_27114577_27114642	0.0809842	HOXD11_HOXA11	ENST00000356950.1|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk 	ENST00000396891.4|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk
hg19_v2_chr7_+_138145076_138145116	0.0805434	HOXD11_HOXA11	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr12_+_101188547_101188585	0.0797883	HOXD11_HOXA11	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr5_-_22853429_22853462	0.0797644	HOXD11_HOXA11	ENST00000504376.2|CDH12|ENSG00000154162.9|cadherin 12, type 2 (N-cadherin 2)
hg19_v2_chr7_+_40174565_40174621	0.079741	HOXD11_HOXA11	ENST00000309930.5|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase 	ENST00000401647.2|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase 	ENST00000335693.4|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase 	ENST00000413931.1|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase 	ENST00000416370.1|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase 	ENST00000540834.1|C7orf10|ENSG00000175600.11|succinylCoA:glutarate-CoA transferase
hg19_v2_chr11_-_57148619_57148624	0.0797304	HOXD11_HOXA11	ENST00000287143.2|PRG3|ENSG00000156575.2|proteoglycan 3
hg19_v2_chr8_+_1993152_1993168	0.0790302	HOXD11_HOXA11	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr6_+_152011628_152011642	0.0789293	HOXD11_HOXA11	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr14_+_74111578_74111730	0.0787531	HOXD11_HOXA11	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr3_-_52188397_52188450	0.0787097	HOXD11_HOXA11	ENST00000474012.1|POC1A|ENSG00000164087.3|POC1 centriolar protein A 	ENST00000296484.2|POC1A|ENSG00000164087.3|POC1 centriolar protein A
hg19_v2_chr16_+_70557685_70557796	0.0786119	HOXD11_HOXA11	ENST00000302516.5|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000566095.2|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000577085.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000567654.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa
hg19_v2_chr4_-_100356551_100356667	0.0784804	HOXD11_HOXA11	ENST00000209665.4|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr1_-_160549235_160549306	0.0781772	HOXD11_HOXA11	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr2_+_201450591_201450680	0.0779897	HOXD11_HOXA11	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr10_+_47894023_47894023	0.0779877	HOXD11_HOXA11	ENST00000358474.5|FAM21B|ENSG00000152726.14|family with sequence similarity 21, member B
hg19_v2_chr8_+_9009202_9009252	0.0778958	HOXD11_HOXA11	ENST00000518496.1|RP11-10A14.4|ENSG00000253426.1|Uncharacterized protein
hg19_v2_chr1_-_94586651_94586733	0.0777498	HOXD11_HOXA11	ENST00000535735.1|ABCA4|ENSG00000198691.7|ATP-binding cassette, sub-family A (ABC1), member 4 	ENST00000370225.3|ABCA4|ENSG00000198691.7|ATP-binding cassette, sub-family A (ABC1), member 4
hg19_v2_chr5_-_169626104_169626145	0.077666	HOXD11_HOXA11	ENST00000520275.1|CTB-27N1.1|ENSG00000249601.2|CTB-27N1.1	ENST00000506431.2|CTB-27N1.1|ENSG00000249601.2|CTB-27N1.1
hg19_v2_chr17_+_45000483_45000563	0.0775216	HOXD11_HOXA11	ENST00000576910.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000439730.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000393456.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000415811.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000575949.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000225567.4|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000572403.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000570879.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2
hg19_v2_chrX_+_30261847_30261849	0.0774818	HOXD11_HOXA11	ENST00000378981.3|MAGEB1|ENSG00000214107.3|melanoma antigen family B, 1 	ENST00000397550.1|MAGEB1|ENSG00000214107.3|melanoma antigen family B, 1
hg19_v2_chr14_+_22433675_22433680	0.0770294	HOXD11_HOXA11	ENST00000390442.3|TRAV12-3|ENSG00000211794.3|T cell receptor alpha variable 12-3
hg19_v2_chr16_-_21431078_21431078	0.0767757	HOXD11_HOXA11	ENST00000458643.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr1_-_25291475_25291511	0.0767083	HOXD11_HOXA11	ENST00000338888.3|RUNX3|ENSG00000020633.14|runt-related transcription factor 3 	ENST00000399916.1|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr9_-_104500862_104500940	0.0765362	HOXD11_HOXA11	ENST00000361820.3|GRIN3A|ENSG00000198785.4|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg19_v2_chr8_-_131399110_131399147	0.0763766	HOXD11_HOXA11	ENST00000521426.1|ASAP1|ENSG00000153317.10|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
hg19_v2_chr9_+_103947311_103947326	0.0761725	HOXD11_HOXA11	ENST00000395056.2|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chr1_-_86848760_86848879	0.0760908	HOXD11_HOXA11	ENST00000460698.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr4_+_120056939_120056973	0.0760691	HOXD11_HOXA11	ENST00000307128.5|MYOZ2|ENSG00000172399.5|myozenin 2
hg19_v2_chr3_-_193272588_193272672	0.0758164	HOXD11_HOXA11	ENST00000295548.3|ATP13A4|ENSG00000127249.10|ATPase type 13A4
hg19_v2_chr10_+_72194585_72194585	0.0758105	HOXD11_HOXA11	ENST00000420338.2|AC022532.1|ENSG00000197604.4|Uncharacterized protein
hg19_v2_chr12_-_9885888_9885895	0.075577	HOXD11_HOXA11	ENST00000327839.3|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chrX_-_154842538_154842588	0.0755763	HOXD11_HOXA11	ENST00000369439.4|TMLHE|ENSG00000185973.6|trimethyllysine hydroxylase, epsilon
hg19_v2_chr12_+_21284118_21284146	0.0754649	HOXD11_HOXA11	ENST00000256958.2|SLCO1B1|ENSG00000134538.2|solute carrier organic anion transporter family, member 1B1
hg19_v2_chr11_+_119019722_119019769	0.0750207	HOXD11_HOXA11	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr4_+_37962018_37962056	0.0747442	HOXD11_HOXA11	ENST00000504686.1|PTTG2|ENSG00000250254.1|pituitary tumor-transforming 2
hg19_v2_chr11_-_35440796_35440916	0.0747354	HOXD11_HOXA11	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr4_-_186317034_186317083	0.0745542	HOXD11_HOXA11	ENST00000505916.1|LRP2BP|ENSG00000109771.11|LRP2 binding protein
hg19_v2_chr17_-_39526052_39526052	0.0743465	HOXD11_HOXA11	ENST00000251646.3|KRT33B|ENSG00000131738.5|keratin 33B
hg19_v2_chr6_-_52705641_52705641	0.0742124	HOXD11_HOXA11	ENST00000370989.2|GSTA5|ENSG00000182793.6|glutathione S-transferase alpha 5
hg19_v2_chr3_-_124653579_124653601	0.0739826	HOXD11_HOXA11	ENST00000478191.1|MUC13|ENSG00000173702.3|mucin 13, cell surface associated 	ENST00000311075.3|MUC13|ENSG00000173702.3|mucin 13, cell surface associated
hg19_v2_chr17_-_72527605_72527620	0.0734197	HOXD11_HOXA11	ENST00000392621.1|CD300LB|ENSG00000178789.4|CD300 molecule-like family member b 	ENST00000314401.3|CD300LB|ENSG00000178789.4|CD300 molecule-like family member b
hg19_v2_chr4_-_47840112_47840128	0.0731748	HOXD11_HOXA11	ENST00000504584.1|CORIN|ENSG00000145244.7|corin, serine peptidase
hg19_v2_chr9_+_74920335_74920367	0.0724015	HOXD11_HOXA11	ENST00000451596.2|RP11-63P12.6|ENSG00000225434.2|RP11-63P12.6	ENST00000436054.1|RP11-63P12.6|ENSG00000225434.2|RP11-63P12.6
hg19_v2_chr12_-_49504655_49504686	0.0722135	HOXD11_HOXA11	ENST00000551782.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like 	ENST00000267102.8|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr14_+_22554680_22554691	0.0721491	HOXD11_HOXA11	ENST00000390451.2|TRAV23DV6|ENSG00000211803.2|T cell receptor alpha variable 23/delta variable 6
hg19_v2_chr17_-_6983550_6983585	0.0716283	HOXD11_HOXA11	ENST00000576617.1|CLEC10A|ENSG00000132514.9|C-type lectin domain family 10, member A 	ENST00000416562.2|CLEC10A|ENSG00000132514.9|C-type lectin domain family 10, member A
hg19_v2_chr1_-_72566613_72566642	0.0715841	HOXD11_HOXA11	ENST00000306821.3|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr18_+_60206744_60206765	0.0706925	HOXD11_HOXA11	ENST00000586834.1|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr16_-_20338748_20338902	0.0704189	HOXD11_HOXA11	ENST00000575582.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000341642.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000381362.4|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000572347.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000572478.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000302555.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane)
hg19_v2_chr13_-_45775162_45775191	0.0700023	HOXD11_HOXA11	ENST00000405872.1|KCTD4|ENSG00000180332.5|potassium channel tetramerization domain containing 4
hg19_v2_chrX_+_41548259_41548320	0.0699637	HOXD11_HOXA11	ENST00000378138.5|GPR34|ENSG00000171659.9|G protein-coupled receptor 34
hg19_v2_chrX_+_140982452_140982452	0.0698451	HOXD11_HOXA11	ENST00000544766.1|MAGEC3|ENSG00000165509.9|melanoma antigen family C, 3
hg19_v2_chr19_-_9003586_9003586	0.0697746	HOXD11_HOXA11	ENST00000380951.5|MUC16|ENSG00000181143.11|mucin 16, cell surface associated
hg19_v2_chr3_+_23851928_23851951	0.0695071	HOXD11_HOXA11	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr10_-_73848531_73848564	0.0694376	HOXD11_HOXA11	ENST00000373109.2|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chrX_-_15332665_15332693	0.0690785	HOXD11_HOXA11	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr19_-_38183201_38183225	0.0690675	HOXD11_HOXA11	ENST00000590008.1|ZNF781|ENSG00000196381.6|zinc finger protein 781 	ENST00000358582.4|ZNF781|ENSG00000196381.6|zinc finger protein 781
hg19_v2_chr5_-_148033693_148033716	0.0689804	HOXD11_HOXA11	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr3_+_108855558_108855733	0.0689139	HOXD11_HOXA11	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr16_+_15031300_15031300	0.0687604	HOXD11_HOXA11	ENST00000328085.6|NPIPA1|ENSG00000183426.11|nuclear pore complex interacting protein family, member A1
hg19_v2_chr11_-_111649015_111649030	0.0684569	HOXD11_HOXA11	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr10_+_133747955_133747955	0.0684094	HOXD11_HOXA11	ENST00000455566.1|PPP2R2D|ENSG00000175470.14|protein phosphatase 2, regulatory subunit B, delta
hg19_v2_chr16_-_20339123_20339130	0.0677775	HOXD11_HOXA11	ENST00000381360.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane)
hg19_v2_chr14_+_52456193_52456320	0.0674093	HOXD11_HOXA11	ENST00000261700.3|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr1_-_226129083_226129123	0.0670859	HOXD11_HOXA11	ENST00000420304.2|LEFTY2|ENSG00000143768.7|left-right determination factor 2
hg19_v2_chr4_-_47839966_47840094	0.0667862	HOXD11_HOXA11	ENST00000273857.4|CORIN|ENSG00000145244.7|corin, serine peptidase 	ENST00000505909.1|CORIN|ENSG00000145244.7|corin, serine peptidase 	ENST00000502252.1|CORIN|ENSG00000145244.7|corin, serine peptidase
hg19_v2_chrX_-_132231123_132231140	0.0667446	HOXD11_HOXA11	ENST00000511190.1|USP26|ENSG00000134588.8|ubiquitin specific peptidase 26
hg19_v2_chr10_-_73848086_73848099	0.0660823	HOXD11_HOXA11	ENST00000536168.1|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chr1_+_68150744_68150890	0.0657302	HOXD11_HOXA11	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chr2_+_219472488_219472534	0.0655823	HOXD11_HOXA11	ENST00000450993.2|PLCD4|ENSG00000115556.9|phospholipase C, delta 4
hg19_v2_chr17_-_39183452_39183468	0.0653924	HOXD11_HOXA11	ENST00000361883.5|KRTAP1-5|ENSG00000221852.4|keratin associated protein 1-5
hg19_v2_chr14_-_65439132_65439177	0.0649384	HOXD11_HOXA11	ENST00000533601.2|RAB15|ENSG00000139998.10|RAB15, member RAS oncogene family
hg19_v2_chr6_+_13272904_13272989	0.0648271	HOXD11_HOXA11	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr2_-_166930131_166930149	0.0646647	HOXD11_HOXA11	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr5_-_148033726_148033741	0.064412	HOXD11_HOXA11	ENST00000354217.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000314512.6|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000362016.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr20_+_2276639_2276656	0.064324	HOXD11_HOXA11	ENST00000381458.5|TGM3|ENSG00000125780.11|transglutaminase 3
hg19_v2_chr21_-_43771226_43771242	0.0642309	HOXD11_HOXA11	ENST00000291526.4|TFF2|ENSG00000160181.4|trefoil factor 2
hg19_v2_chr8_-_87755878_87755933	0.0639934	HOXD11_HOXA11	ENST00000320005.5|CNGB3|ENSG00000170289.8|cyclic nucleotide gated channel beta 3
hg19_v2_chr17_-_46806540_46806558	0.0636839	HOXD11_HOXA11	ENST00000290295.7|HOXB13|ENSG00000159184.7|homeobox B13
hg19_v2_chr3_+_15045419_15045433	0.0631551	HOXD11_HOXA11	ENST00000406272.2|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr4_+_159443024_159443056	0.0629997	HOXD11_HOXA11	ENST00000448688.2|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr11_-_35441524_35441578	0.0623128	HOXD11_HOXA11	ENST00000395750.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENST00000449068.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr15_+_85525205_85525308	0.0622913	HOXD11_HOXA11	ENST00000394553.1|PDE8A|ENSG00000073417.10|phosphodiesterase 8A 	ENST00000339708.5|PDE8A|ENSG00000073417.10|phosphodiesterase 8A
hg19_v2_chr6_+_30687978_30688141	0.0622676	HOXD11_HOXA11	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr7_-_38305279_38305279	0.061675	HOXD11_HOXA11	ENST00000443402.2|TRGC1|ENSG00000211689.2|T cell receptor gamma constant 1
hg19_v2_chr1_-_101360331_101360373	0.0614405	HOXD11_HOXA11	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr8_-_49834299_49834446	0.0614317	HOXD11_HOXA11	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr12_-_10955226_10955226	0.0611947	HOXD11_HOXA11	ENST00000240687.2|TAS2R7|ENSG00000121377.2|taste receptor, type 2, member 7
hg19_v2_chr17_-_74049720_74049747	0.0607895	HOXD11_HOXA11	ENST00000602720.1|SRP68|ENSG00000167881.10|signal recognition particle 68kDa
hg19_v2_chrX_+_64708615_64708615	0.0607511	HOXD11_HOXA11	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr7_-_149158187_149158214	0.060375	HOXD11_HOXA11	ENST00000247930.4|ZNF777|ENSG00000196453.7|zinc finger protein 777
hg19_v2_chrX_+_140984021_140984021	0.0603092	HOXD11_HOXA11	ENST00000409007.1|MAGEC3|ENSG00000165509.9|melanoma antigen family C, 3
hg19_v2_chr9_+_131549483_131549606	0.0601998	HOXD11_HOXA11	ENST00000372648.5|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13 	ENST00000539497.1|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr1_-_95391315_95391357	0.0599687	HOXD11_HOXA11	ENST00000545882.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000415017.1|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr14_-_106926724_106926724	0.059906	HOXD11_HOXA11	ENST00000434710.1|IGHV3-43|ENSG00000232216.1|immunoglobulin heavy variable 3-43
hg19_v2_chr1_+_65730385_65730468	0.0598254	HOXD11_HOXA11	ENST00000263441.7|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENST00000395325.3|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v2_chr7_-_108209897_108209913	0.0596995	HOXD11_HOXA11	ENST00000313516.5|THAP5|ENSG00000177683.9|THAP domain containing 5
hg19_v2_chr3_+_35722487_35722507	0.0596801	HOXD11_HOXA11	ENST00000441454.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr5_+_121465207_121465216	0.059517	HOXD11_HOXA11	ENST00000296600.4|ZNF474|ENSG00000164185.4|zinc finger protein 474
hg19_v2_chr8_+_104892639_104892652	0.059489	HOXD11_HOXA11	ENST00000436393.2|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr2_-_69180012_69180036	0.0591766	HOXD11_HOXA11	ENST00000481498.1|GKN2|ENSG00000183607.5|gastrokine 2
hg19_v2_chr3_+_185303962_185304021	0.0590887	HOXD11_HOXA11	ENST00000296257.5|SENP2|ENSG00000163904.8|SUMO1/sentrin/SMT3 specific peptidase 2
hg19_v2_chr10_-_52008313_52008370	0.0585208	HOXD11_HOXA11	ENST00000329428.6|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000395526.4|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000447815.1|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v2_chr21_-_28338732_28338832	0.0584004	HOXD11_HOXA11	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr6_-_49681235_49681274	0.0583031	HOXD11_HOXA11	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr2_+_64068844_64068997	0.0581912	HOXD11_HOXA11	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr15_+_76352178_76352306	0.0574509	HOXD11_HOXA11	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr2_-_136594740_136594760	0.0572294	HOXD11_HOXA11	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr16_+_14805546_14805546	0.0572199	HOXD11_HOXA11	ENST00000552140.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr21_+_25801041_25801080	0.0570654	HOXD11_HOXA11	ENST00000453784.2|AP000476.1|ENSG00000237484.5|AP000476.1	ENST00000423581.1|AP000476.1|ENSG00000237484.5|AP000476.1
hg19_v2_chr12_+_49621658_49621709	0.0567591	HOXD11_HOXA11	ENST00000541364.1|TUBA1C|ENSG00000167553.10|tubulin, alpha 1c
hg19_v2_chr19_+_19626531_19626574	0.0563325	HOXD11_HOXA11	ENST00000507754.4|NDUFA13|ENSG00000186010.14|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13
hg19_v2_chr11_+_55578854_55578854	0.0561469	HOXD11_HOXA11	ENST00000333973.2|OR5L1|ENSG00000186117.2|olfactory receptor, family 5, subfamily L, member 1
hg19_v2_chr2_+_64069459_64069579	0.0558513	HOXD11_HOXA11	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr20_-_39928756_39928766	0.0554486	HOXD11_HOXA11	ENST00000432768.2|ZHX3|ENSG00000174306.17|zinc fingers and homeoboxes 3
hg19_v2_chr13_+_23755054_23755092	0.0554245	HOXD11_HOXA11	ENST00000218867.3|SGCG|ENSG00000102683.6|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)
hg19_v2_chr14_+_73706308_73706333	0.0549742	HOXD11_HOXA11	ENST00000554301.1|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein 	ENST00000555445.1|PAPLN|ENSG00000100767.11|papilin, proteoglycan-like sulfated glycoprotein
hg19_v2_chr3_+_40498783_40498845	0.0543774	HOXD11_HOXA11	ENST00000338970.6|RPL14|ENSG00000188846.9|ribosomal protein L14 	ENST00000396203.2|RPL14|ENSG00000188846.9|ribosomal protein L14 	ENST00000416518.1|RPL14|ENSG00000188846.9|ribosomal protein L14
hg19_v2_chr3_-_9921934_9921940	0.0542088	HOXD11_HOXA11	ENST00000423850.1|CIDEC|ENSG00000187288.6|cell death-inducing DFFA-like effector c
hg19_v2_chr18_+_55711575_55711628	0.0536279	HOXD11_HOXA11	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr17_-_48943706_48943723	0.053607	HOXD11_HOXA11	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chrX_-_71933888_71934180	0.0533512	HOXD11_HOXA11	ENST00000373542.4|PHKA1|ENSG00000067177.10|phosphorylase kinase, alpha 1 (muscle) 	ENST00000339490.3|PHKA1|ENSG00000067177.10|phosphorylase kinase, alpha 1 (muscle) 	ENST00000541944.1|PHKA1|ENSG00000067177.10|phosphorylase kinase, alpha 1 (muscle) 	ENST00000373539.3|PHKA1|ENSG00000067177.10|phosphorylase kinase, alpha 1 (muscle) 	ENST00000373545.3|PHKA1|ENSG00000067177.10|phosphorylase kinase, alpha 1 (muscle)
hg19_v2_chr1_-_28384598_28384680	0.0533475	HOXD11_HOXA11	ENST00000373864.1|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr4_+_159443090_159443129	0.0531483	HOXD11_HOXA11	ENST00000343542.5|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1 	ENST00000470033.1|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr1_-_226129189_226129232	0.0530081	HOXD11_HOXA11	ENST00000366820.5|LEFTY2|ENSG00000143768.7|left-right determination factor 2
hg19_v2_chr3_+_148545586_148545609	0.0527778	HOXD11_HOXA11	ENST00000282957.4|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue) 	ENST00000468341.1|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue)
hg19_v2_chr4_+_119809984_119810024	0.0523534	HOXD11_HOXA11	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr19_-_37663332_37663344	0.0522322	HOXD11_HOXA11	ENST00000392157.2|ZNF585A|ENSG00000196967.6|zinc finger protein 585A
hg19_v2_chr8_+_30300119_30300137	0.0521241	HOXD11_HOXA11	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr12_-_18243119_18243133	0.0521076	HOXD11_HOXA11	ENST00000538724.1|RERGL|ENSG00000111404.2|RERG/RAS-like 	ENST00000229002.2|RERGL|ENSG00000111404.2|RERG/RAS-like
hg19_v2_chr11_+_76745385_76745447	0.0515523	HOXD11_HOXA11	ENST00000533140.1|B3GNT6|ENSG00000198488.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) 	ENST00000354301.5|B3GNT6|ENSG00000198488.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase) 	ENST00000528622.1|B3GNT6|ENSG00000198488.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
hg19_v2_chr1_+_199996702_199996732	0.0513832	HOXD11_HOXA11	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr12_+_101988627_101988762	0.0512405	HOXD11_HOXA11	ENST00000547405.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000452455.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000441232.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000360610.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000392934.3|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000547509.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361685.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000549145.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000553190.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chrX_-_23761317_23761419	0.0511368	HOXD11_HOXA11	ENST00000492081.1|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000379303.5|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9 	ENST00000336430.7|ACOT9|ENSG00000123130.12|acyl-CoA thioesterase 9
hg19_v2_chr1_+_150898812_150898957	0.0506632	HOXD11_HOXA11	ENST00000271640.5|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000448029.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368962.2|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000534805.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368969.4|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000368963.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1 	ENST00000498193.1|SETDB1|ENSG00000143379.8|SET domain, bifurcated 1
hg19_v2_chr6_-_83903600_83903655	0.0504686	HOXD11_HOXA11	ENST00000506587.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3 	ENST00000507554.1|PGM3|ENSG00000013375.11|phosphoglucomutase 3
hg19_v2_chr11_+_49050504_49050504	0.0500905	HOXD11_HOXA11	ENST00000332682.7|TRIM49B|ENSG00000182053.8|tripartite motif containing 49B
hg19_v2_chr8_+_26150628_26150749	0.0500723	HOXD11_HOXA11	ENST00000523925.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000315985.7|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr3_-_178984759_178984790	0.0496844	HOXD11_HOXA11	ENST00000349697.2|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3 	ENST00000497599.1|KCNMB3|ENSG00000171121.12|potassium large conductance calcium-activated channel, subfamily M beta member 3
hg19_v2_chr4_-_100065440_100065463	0.0494223	HOXD11_HOXA11	ENST00000508393.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENST00000265512.7|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide
hg19_v2_chr1_+_215747118_215747138	0.0492943	HOXD11_HOXA11	ENST00000448333.1|KCTD3|ENSG00000136636.8|potassium channel tetramerization domain containing 3
hg19_v2_chr10_-_31146615_31146708	0.0489869	HOXD11_HOXA11	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr19_-_10446449_10446481	0.0489078	HOXD11_HOXA11	ENST00000592439.1|ICAM3|ENSG00000076662.5|intercellular adhesion molecule 3
hg19_v2_chr10_-_47151341_47151400	0.0488879	HOXD11_HOXA11	ENST00000422732.2|LINC00842|ENSG00000223477.3|long intergenic non-protein coding RNA 842
hg19_v2_chr14_-_23398565_23398617	0.0487692	HOXD11_HOXA11	ENST00000397440.4|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000538452.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000421938.2|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000554867.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000556616.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000216350.8|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000553550.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000397441.2|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5 	ENST00000553897.1|PRMT5|ENSG00000100462.11|protein arginine methyltransferase 5
hg19_v2_chr5_+_140767452_140767452	0.0487146	HOXD11_HOXA11	ENST00000519479.1|PCDHGB4|ENSG00000253953.1|protocadherin gamma subfamily B, 4
hg19_v2_chr1_+_15783222_15783229	0.0482565	HOXD11_HOXA11	ENST00000359621.4|CELA2A|ENSG00000142615.7|chymotrypsin-like elastase family, member 2A
hg19_v2_chr19_+_56152262_56152351	0.0481477	HOXD11_HOXA11	ENST00000325333.5|ZNF580|ENSG00000213015.4|zinc finger protein 580 	ENST00000590190.1|ZNF580|ENSG00000213015.4|zinc finger protein 580
hg19_v2_chr11_+_121447469_121447547	0.0479607	HOXD11_HOXA11	ENST00000532694.1|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing 	ENST00000534286.1|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr11_-_14521379_14521573	0.0477611	HOXD11_HOXA11	ENST00000249923.3|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000529866.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000439561.2|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000534771.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr9_+_131062367_131062367	0.0475958	HOXD11_HOXA11	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr12_-_10573149_10573194	0.0475443	HOXD11_HOXA11	ENST00000381904.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000381903.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3 	ENST00000396439.2|KLRC3|ENSG00000205810.4|killer cell lectin-like receptor subfamily C, member 3
hg19_v2_chr7_+_139528952_139529038	0.0474976	HOXD11_HOXA11	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr4_-_174320687_174320687	0.047409	HOXD11_HOXA11	ENST00000296506.3|SCRG1|ENSG00000164106.3|stimulator of chondrogenesis 1
hg19_v2_chr7_+_53103320_53103350	0.047403	HOXD11_HOXA11	ENST00000408890.4|POM121L12|ENSG00000221900.4|POM121 transmembrane nucleoporin-like 12
hg19_v2_chr14_+_52456327_52456344	0.0473834	HOXD11_HOXA11	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr4_-_113558014_113558073	0.0473723	HOXD11_HOXA11	ENST00000503172.1|C4orf21|ENSG00000138658.11|chromosome 4 open reading frame 21 	ENST00000505019.1|C4orf21|ENSG00000138658.11|chromosome 4 open reading frame 21 	ENST00000309071.5|C4orf21|ENSG00000138658.11|chromosome 4 open reading frame 21
hg19_v2_chr9_+_35658377_35658393	0.0473656	HOXD11_HOXA11	ENST00000378409.3|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107
hg19_v2_chr9_-_124976185_124976212	0.0473445	HOXD11_HOXA11	ENST00000464484.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr9_-_86593238_86593367	0.0470995	HOXD11_HOXA11	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr11_+_101785727_101785767	0.0467599	HOXD11_HOXA11	ENST00000263468.8|KIAA1377|ENSG00000110318.9|KIAA1377
hg19_v2_chr16_+_14844670_14844670	0.046653	HOXD11_HOXA11	ENST00000553201.1|NPIPA2|ENSG00000254852.4|nuclear pore complex interacting protein family, member A2
hg19_v2_chr2_-_207024134_207024195	0.0466512	HOXD11_HOXA11	ENST00000457011.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000440274.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase) 	ENST00000432169.1|NDUFS1|ENSG00000023228.9|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)
hg19_v2_chr4_-_10686373_10686397	0.0461608	HOXD11_HOXA11	ENST00000442825.2|CLNK|ENSG00000109684.10|cytokine-dependent hematopoietic cell linker
hg19_v2_chr1_+_174670143_174670160	0.0461487	HOXD11_HOXA11	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr19_-_5903714_5903809	0.0457519	HOXD11_HOXA11	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chr3_-_113160334_113160457	0.0453969	HOXD11_HOXA11	ENST00000393845.2|WDR52|ENSG00000206530.4|WD repeat domain 52 	ENST00000295868.2|WDR52|ENSG00000206530.4|WD repeat domain 52
hg19_v2_chr6_+_26199737_26199754	0.0451363	HOXD11_HOXA11	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr8_+_92082424_92082597	0.045134	HOXD11_HOXA11	ENST00000285420.4|OTUD6B|ENSG00000155100.6|OTU domain containing 6B 	ENST00000404789.3|OTUD6B|ENSG00000155100.6|OTU domain containing 6B
hg19_v2_chr8_+_24298531_24298551	0.0450569	HOXD11_HOXA11	ENST00000175238.6|ADAM7|ENSG00000069206.11|ADAM metallopeptidase domain 7
hg19_v2_chr4_+_84377115_84377136	0.0447827	HOXD11_HOXA11	ENST00000295491.4|MRPS18C|ENSG00000163319.6|mitochondrial ribosomal protein S18C 	ENST00000507019.1|MRPS18C|ENSG00000163319.6|mitochondrial ribosomal protein S18C
hg19_v2_chr1_+_206972215_206972215	0.0444816	HOXD11_HOXA11	ENST00000340758.2|IL19|ENSG00000142224.11|interleukin 19
hg19_v2_chr17_+_57232690_57232860	0.0442458	HOXD11_HOXA11	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr9_-_124976154_124976177	0.0442316	HOXD11_HOXA11	ENST00000482062.1|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr6_-_167797887_167797998	0.0442074	HOXD11_HOXA11	ENST00000476779.2|TCP10|ENSG00000203690.7|t-complex 10 	ENST00000460930.2|TCP10|ENSG00000203690.7|t-complex 10 	ENST00000397829.4|TCP10|ENSG00000203690.7|t-complex 10 	ENST00000366827.2|TCP10|ENSG00000203690.7|t-complex 10
hg19_v2_chr3_+_169629354_169629372	0.0439142	HOXD11_HOXA11	ENST00000428432.2|SAMD7|ENSG00000187033.5|sterile alpha motif domain containing 7 	ENST00000335556.3|SAMD7|ENSG00000187033.5|sterile alpha motif domain containing 7
hg19_v2_chr11_-_110561721_110561721	0.0433353	HOXD11_HOXA11	ENST00000357139.3|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr1_+_236958554_236958628	0.0433058	HOXD11_HOXA11	ENST00000366577.5|MTR|ENSG00000116984.8|5-methyltetrahydrofolate-homocysteine methyltransferase 	ENST00000418145.2|MTR|ENSG00000116984.8|5-methyltetrahydrofolate-homocysteine methyltransferase
hg19_v2_chr1_+_202317815_202317854	0.0432647	HOXD11_HOXA11	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr6_-_136788001_136788021	0.0430961	HOXD11_HOXA11	ENST00000544465.1|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr10_+_88428206_88428300	0.0427056	HOXD11_HOXA11	ENST00000429277.2|LDB3|ENSG00000122367.15|LIM domain binding 3 	ENST00000458213.2|LDB3|ENSG00000122367.15|LIM domain binding 3 	ENST00000352360.5|LDB3|ENSG00000122367.15|LIM domain binding 3
hg19_v2_chrX_-_102943022_102943086	0.042463	HOXD11_HOXA11	ENST00000433176.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr10_-_104001231_104001274	0.0422731	HOXD11_HOXA11	ENST00000370002.3|PITX3|ENSG00000107859.5|paired-like homeodomain 3
hg19_v2_chr1_-_27961720_27961788	0.0421205	HOXD11_HOXA11	ENST00000545953.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog 	ENST00000374005.3|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr6_+_4890226_4890276	0.0420113	HOXD11_HOXA11	ENST00000343762.5|CDYL|ENSG00000153046.13|chromodomain protein, Y-like
hg19_v2_chr19_+_21106081_21106207	0.0419714	HOXD11_HOXA11	ENST00000300540.3|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000595854.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000601284.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000328178.8|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000599885.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000596476.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000345030.6|ZNF85|ENSG00000105750.10|zinc finger protein 85
hg19_v2_chr1_+_17248418_17248445	0.0415478	HOXD11_HOXA11	ENST00000375541.5|CROCC|ENSG00000058453.12|ciliary rootlet coiled-coil, rootletin
hg19_v2_chr3_-_46069223_46069234	0.0413472	HOXD11_HOXA11	ENST00000309285.3|XCR1|ENSG00000173578.6|chemokine (C motif) receptor 1
hg19_v2_chr9_-_131085021_131085021	0.0413084	HOXD11_HOXA11	ENST00000372890.4|TRUB2|ENSG00000167112.7|TruB pseudouridine (psi) synthase family member 2
hg19_v2_chr12_-_68619586_68619601	0.040946	HOXD11_HOXA11	ENST00000229134.4|IL26|ENSG00000111536.4|interleukin 26
hg19_v2_chr22_-_32860427_32860471	0.0408983	HOXD11_HOXA11	ENST00000534972.1|BPIFC|ENSG00000184459.4|BPI fold containing family C 	ENST00000397450.1|BPIFC|ENSG00000184459.4|BPI fold containing family C 	ENST00000397452.1|BPIFC|ENSG00000184459.4|BPI fold containing family C
hg19_v2_chrX_+_11129388_11129485	0.040586	HOXD11_HOXA11	ENST00000321143.4|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380763.3|HCCS|ENSG00000004961.10|holocytochrome c synthase 	ENST00000380762.4|HCCS|ENSG00000004961.10|holocytochrome c synthase
hg19_v2_chr12_+_51818555_51818574	0.0405589	HOXD11_HOXA11	ENST00000453097.2|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr3_-_155394152_155394205	0.0404523	HOXD11_HOXA11	ENST00000494598.1|PLCH1|ENSG00000114805.12|phospholipase C, eta 1
hg19_v2_chr2_-_40657397_40657444	0.0403123	HOXD11_HOXA11	ENST00000408028.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000332839.4|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000406391.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000542024.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000542756.1|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1 	ENST00000405901.3|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr19_+_4402659_4402714	0.040252	HOXD11_HOXA11	ENST00000301280.5|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150) 	ENST00000585854.1|CHAF1A|ENSG00000167670.11|chromatin assembly factor 1, subunit A (p150)
hg19_v2_chr1_-_29557383_29557469	0.0401629	HOXD11_HOXA11	ENST00000373791.3|MECR|ENSG00000116353.11|mitochondrial trans-2-enoyl-CoA reductase 	ENST00000263702.6|MECR|ENSG00000116353.11|mitochondrial trans-2-enoyl-CoA reductase
hg19_v2_chr12_-_4647606_4647681	0.0395112	HOXD11_HOXA11	ENST00000261250.3|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000541014.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000545746.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4 	ENST00000542080.1|C12orf4|ENSG00000047621.7|chromosome 12 open reading frame 4
hg19_v2_chr18_+_21032781_21032795	0.0394595	HOXD11_HOXA11	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr19_-_36233332_36233360	0.0394377	HOXD11_HOXA11	ENST00000592537.1|IGFLR1|ENSG00000126246.5|IGF-like family receptor 1 	ENST00000246532.1|IGFLR1|ENSG00000126246.5|IGF-like family receptor 1 	ENST00000344990.3|IGFLR1|ENSG00000126246.5|IGF-like family receptor 1 	ENST00000588992.1|IGFLR1|ENSG00000126246.5|IGF-like family receptor 1
hg19_v2_chr19_+_21264980_21265026	0.0393038	HOXD11_HOXA11	ENST00000596053.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000597086.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596143.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596367.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000601416.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr8_+_128426535_128426535	0.0391708	HOXD11_HOXA11	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr2_+_219840955_219841012	0.0390011	HOXD11_HOXA11	ENST00000598002.1|LINC00608|ENSG00000236445.2|long intergenic non-protein coding RNA 608 	ENST00000432733.1|LINC00608|ENSG00000236445.2|long intergenic non-protein coding RNA 608
hg19_v2_chr7_+_96634850_96634874	0.0389792	HOXD11_HOXA11	ENST00000518156.2|DLX6|ENSG00000006377.9|distal-less homeobox 6
hg19_v2_chr12_+_51818586_51818663	0.0388118	HOXD11_HOXA11	ENST00000394856.1|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr3_-_46249878_46249905	0.0386604	HOXD11_HOXA11	ENST00000296140.3|CCR1|ENSG00000163823.3|chemokine (C-C motif) receptor 1
hg19_v2_chr10_-_115614127_115614176	0.038578	HOXD11_HOXA11	ENST00000369305.1|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr16_+_16472912_16472912	0.0383598	HOXD11_HOXA11	ENST00000530217.2|NPIPA7|ENSG00000214967.4|nuclear pore complex interacting protein family, member A7
hg19_v2_chr7_+_139529040_139529073	0.0382863	HOXD11_HOXA11	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr18_-_13915530_13915540	0.0381044	HOXD11_HOXA11	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr19_-_6767516_6767599	0.0380659	HOXD11_HOXA11	ENST00000245908.6|SH2D3A|ENSG00000125731.8|SH2 domain containing 3A
hg19_v2_chr6_-_41703952_41703997	0.0380635	HOXD11_HOXA11	ENST00000358871.2|TFEB|ENSG00000112561.13|transcription factor EB 	ENST00000403298.4|TFEB|ENSG00000112561.13|transcription factor EB
hg19_v2_chr18_-_67624160_67624238	0.0378108	HOXD11_HOXA11	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chrX_-_15619076_15619137	0.0377341	HOXD11_HOXA11	ENST00000252519.3|ACE2|ENSG00000130234.6|angiotensin I converting enzyme 2
hg19_v2_chr9_+_130026756_130026871	0.0370928	HOXD11_HOXA11	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr14_-_106539557_106539581	0.0370147	HOXD11_HOXA11	ENST00000390599.2|IGHV1-8|ENSG00000211939.2|immunoglobulin heavy variable 1-8
hg19_v2_chr10_+_26505179_26505236	0.0361742	HOXD11_HOXA11	ENST00000376261.3|GAD2|ENSG00000136750.7|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
hg19_v2_chr6_-_33037019_33037047	0.0359637	HOXD11_HOXA11	ENST00000437811.1|HLA-DPA1|ENSG00000231389.3|major histocompatibility complex, class II, DP alpha 1
hg19_v2_chrX_-_72347916_72347922	0.0356406	HOXD11_HOXA11	ENST00000373518.1|NAP1L6|ENSG00000204118.1|nucleosome assembly protein 1-like 6
hg19_v2_chr1_+_181057638_181057692	0.0356107	HOXD11_HOXA11	ENST00000367577.4|IER5|ENSG00000162783.8|immediate early response 5
hg19_v2_chr10_-_61900762_61900779	0.0355571	HOXD11_HOXA11	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr11_+_34127142_34127189	0.0352257	HOXD11_HOXA11	ENST00000257829.3|NAT10|ENSG00000135372.4|N-acetyltransferase 10 (GCN5-related) 	ENST00000531159.2|NAT10|ENSG00000135372.4|N-acetyltransferase 10 (GCN5-related)
hg19_v2_chr7_-_95025661_95025712	0.0350969	HOXD11_HOXA11	ENST00000542556.1|PON1|ENSG00000005421.4|paraoxonase 1 	ENST00000265627.5|PON3|ENSG00000105852.6|paraoxonase 3 	ENST00000427422.1|PON3|ENSG00000105852.6|paraoxonase 3 	ENST00000451904.1|PON3|ENSG00000105852.6|paraoxonase 3
hg19_v2_chr17_-_59668550_59668587	0.0347417	HOXD11_HOXA11	ENST00000521764.1|NACA2|ENSG00000253506.1|nascent polypeptide-associated complex alpha subunit 2
hg19_v2_chr1_+_156163880_156163917	0.03472	HOXD11_HOXA11	ENST00000359511.4|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44 	ENST00000423538.2|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44
hg19_v2_chr7_-_138666053_138666146	0.0346501	HOXD11_HOXA11	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr14_+_24540046_24540132	0.0346445	HOXD11_HOXA11	ENST00000397016.2|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000537691.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000560356.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000558450.1|CPNE6|ENSG00000100884.5|copine VI (neuronal)
hg19_v2_chr4_+_186990298_186990342	0.0342682	HOXD11_HOXA11	ENST00000296795.3|TLR3|ENSG00000164342.8|toll-like receptor 3 	ENST00000513189.1|TLR3|ENSG00000164342.8|toll-like receptor 3
hg19_v2_chr13_+_33160553_33160564	0.0342187	HOXD11_HOXA11	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr14_+_55494323_55494345	0.0341292	HOXD11_HOXA11	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr11_+_72983246_72983253	0.0341141	HOXD11_HOXA11	ENST00000393590.2|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chrX_-_37706815_37706890	0.0338542	HOXD11_HOXA11	ENST00000378578.4|DYNLT3|ENSG00000165169.6|dynein, light chain, Tctex-type 3
hg19_v2_chr12_+_51818749_51818901	0.033701	HOXD11_HOXA11	ENST00000514353.3|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr6_+_31730773_31730831	0.0334222	HOXD11_HOXA11	ENST00000415669.2|SAPCD1|ENSG00000228727.4|suppressor APC domain containing 1 	ENST00000425424.1|SAPCD1|ENSG00000228727.4|suppressor APC domain containing 1
hg19_v2_chr4_+_86748898_86748936	0.0332129	HOXD11_HOXA11	ENST00000509300.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr8_-_86290333_86290348	0.0331206	HOXD11_HOXA11	ENST00000521846.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523022.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000524324.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519991.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000520663.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517590.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522579.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522814.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000522662.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000523858.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000519129.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr11_-_4719072_4719089	0.0331049	HOXD11_HOXA11	ENST00000396950.3|OR51E2|ENSG00000167332.7|olfactory receptor, family 51, subfamily E, member 2 	ENST00000532598.1|OR51E2|ENSG00000167332.7|olfactory receptor, family 51, subfamily E, member 2
hg19_v2_chr1_+_92545862_92545917	0.0328195	HOXD11_HOXA11	ENST00000370382.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8 	ENST00000342818.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8
hg19_v2_chr1_+_192605252_192605295	0.0327207	HOXD11_HOXA11	ENST00000391995.2|RGS13|ENSG00000127074.10|regulator of G-protein signaling 13 	ENST00000543215.1|RGS13|ENSG00000127074.10|regulator of G-protein signaling 13
hg19_v2_chr9_-_131084497_131084497	0.0325827	HOXD11_HOXA11	ENST00000546104.1|TRUB2|ENSG00000167112.7|TruB pseudouridine (psi) synthase family member 2
hg19_v2_chr10_-_98031265_98031306	0.0325654	HOXD11_HOXA11	ENST00000224337.5|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000371176.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chrX_-_43741594_43741703	0.0323876	HOXD11_HOXA11	ENST00000536181.1|MAOB|ENSG00000069535.12|monoamine oxidase B 	ENST00000378069.4|MAOB|ENSG00000069535.12|monoamine oxidase B
hg19_v2_chrX_-_9734004_9734027	0.0319831	HOXD11_HOXA11	ENST00000467482.1|GPR143|ENSG00000101850.8|G protein-coupled receptor 143 	ENST00000380929.2|GPR143|ENSG00000101850.8|G protein-coupled receptor 143
hg19_v2_chr10_+_135160844_135160869	0.0317379	HOXD11_HOXA11	ENST00000423766.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1 	ENST00000458230.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1
hg19_v2_chr10_+_127661942_127662084	0.031717	HOXD11_HOXA11	ENST00000417114.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000445510.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000368691.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1
hg19_v2_chr7_-_5570229_5570340	0.0316962	HOXD11_HOXA11	ENST00000331789.5|ACTB|ENSG00000075624.9|actin, beta
hg19_v2_chr6_+_108487245_108487262	0.0312393	HOXD11_HOXA11	ENST00000368986.4|NR2E1|ENSG00000112333.7|nuclear receptor subfamily 2, group E, member 1
hg19_v2_chrX_-_55057403_55057497	0.0309366	HOXD11_HOXA11	ENST00000396198.3|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000335854.4|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000455688.1|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000330807.5|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2
hg19_v2_chr8_-_125486755_125486828	0.0308704	HOXD11_HOXA11	ENST00000499418.2|RNF139-AS1|ENSG00000245149.3|RNF139 antisense RNA 1 (head to head) 	ENST00000530778.1|RNF139-AS1|ENSG00000245149.3|RNF139 antisense RNA 1 (head to head)
hg19_v2_chr16_+_16429787_16429787	0.030477	HOXD11_HOXA11	ENST00000331436.4|AC138969.4|ENSG00000183889.8|Protein PKD1P1  	ENST00000541593.1|AC138969.4|ENSG00000183889.8|Protein PKD1P1
hg19_v2_chr6_+_12958137_12958234	0.0304352	HOXD11_HOXA11	ENST00000457702.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379345.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr16_-_48281305_48281419	0.0302812	HOXD11_HOXA11	ENST00000356608.2|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr11_-_60674037_60674079	0.030181	HOXD11_HOXA11	ENST00000541371.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19 	ENST00000227524.4|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr1_-_120311517_120311536	0.0299331	HOXD11_HOXA11	ENST00000369406.3|HMGCS2|ENSG00000134240.7|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial) 	ENST00000544913.2|HMGCS2|ENSG00000134240.7|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)
hg19_v2_chr6_+_46761118_46761132	0.0297316	HOXD11_HOXA11	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr16_+_1728257_1728296	0.0295399	HOXD11_HOXA11	ENST00000248098.3|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000562684.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000561516.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382711.5|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000566742.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr4_-_87281224_87281375	0.0292289	HOXD11_HOXA11	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr18_-_44702668_44702747	0.0292114	HOXD11_HOXA11	ENST00000256433.3|IER3IP1|ENSG00000134049.3|immediate early response 3 interacting protein 1
hg19_v2_chr16_-_3350614_3350614	0.0292073	HOXD11_HOXA11	ENST00000268674.2|TIGD7|ENSG00000140993.6|tigger transposable element derived 7
hg19_v2_chrX_-_135962876_135962896	0.0291687	HOXD11_HOXA11	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr12_-_112123524_112123562	0.0291393	HOXD11_HOXA11	ENST00000327551.6|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr5_-_133510456_133510499	0.0285536	HOXD11_HOXA11	ENST00000520417.1|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr6_-_91296602_91296721	0.0285047	HOXD11_HOXA11	ENST00000369325.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7 	ENST00000369327.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7
hg19_v2_chr5_+_175511859_175511909	0.0283235	HOXD11_HOXA11	ENST00000503724.2|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B 	ENST00000253490.4|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chrY_+_3447082_3447156	0.0282654	HOXD11_HOXA11	ENST00000321217.4|TGIF2LY|ENSG00000176679.8|TGFB-induced factor homeobox 2-like, Y-linked 	ENST00000559055.2|TGIF2LY|ENSG00000176679.8|TGFB-induced factor homeobox 2-like, Y-linked
hg19_v2_chr15_-_55489097_55489265	0.0281795	HOXD11_HOXA11	ENST00000260443.4|RSL24D1|ENSG00000137876.5|ribosomal L24 domain containing 1
hg19_v2_chr6_-_91296737_91296821	0.0281463	HOXD11_HOXA11	ENST00000369332.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7 	ENST00000369329.3|MAP3K7|ENSG00000135341.13|mitogen-activated protein kinase kinase kinase 7
hg19_v2_chr15_+_40987327_40987397	0.0280407	HOXD11_HOXA11	ENST00000423169.2|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000267868.3|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000557850.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000532743.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000382643.3|RAD51|ENSG00000051180.12|RAD51 recombinase
hg19_v2_chr8_+_11225911_11225911	0.0278463	HOXD11_HOXA11	ENST00000284481.3|C8orf12|ENSG00000184608.4|chromosome 8 open reading frame 12
hg19_v2_chr14_+_35591928_35591965	0.027535	HOXD11_HOXA11	ENST00000605870.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000557404.3|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr2_+_1488435_1488560	0.0273675	HOXD11_HOXA11	ENST00000446278.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000469607.1|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr5_-_146258205_146258230	0.0273292	HOXD11_HOXA11	ENST00000394413.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr3_-_15563229_15563265	0.027321	HOXD11_HOXA11	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr17_+_4843303_4843329	0.0271113	HOXD11_HOXA11	ENST00000571816.1|RNF167|ENSG00000108523.11|ring finger protein 167
hg19_v2_chr7_+_57509877_57509895	0.0269838	HOXD11_HOXA11	ENST00000420713.1|ZNF716|ENSG00000182111.8|zinc finger protein 716
hg19_v2_chr10_-_98031310_98031338	0.0269368	HOXD11_HOXA11	ENST00000427367.2|BLNK|ENSG00000095585.12|B-cell linker 	ENST00000413476.2|BLNK|ENSG00000095585.12|B-cell linker
hg19_v2_chr2_+_11679963_11679986	0.0268778	HOXD11_HOXA11	ENST00000263834.5|GREB1|ENSG00000196208.9|growth regulation by estrogen in breast cancer 1
hg19_v2_chr18_+_32556892_32557026	0.0268474	HOXD11_HOXA11	ENST00000591734.1|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2 	ENST00000413393.1|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2 	ENST00000589180.1|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2 	ENST00000587359.1|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr9_-_95244781_95244796	0.0267821	HOXD11_HOXA11	ENST00000375544.3|ASPN|ENSG00000106819.7|asporin 	ENST00000375543.1|ASPN|ENSG00000106819.7|asporin 	ENST00000395538.3|ASPN|ENSG00000106819.7|asporin 	ENST00000450139.2|ASPN|ENSG00000106819.7|asporin
hg19_v2_chr8_-_59412717_59412795	0.0265206	HOXD11_HOXA11	ENST00000301645.3|CYP7A1|ENSG00000167910.3|cytochrome P450, family 7, subfamily A, polypeptide 1
hg19_v2_chr16_-_66764119_66764138	0.0262192	HOXD11_HOXA11	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr9_+_44868935_44868935	0.026183	HOXD11_HOXA11	ENST00000448436.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr19_-_23941680_23941704	0.0257427	HOXD11_HOXA11	ENST00000402377.3|ZNF681|ENSG00000196172.8|zinc finger protein 681
hg19_v2_chr7_-_38289173_38289173	0.0257022	HOXD11_HOXA11	ENST00000436911.2|TRGC2|ENSG00000227191.2|T cell receptor gamma constant 2
hg19_v2_chr5_-_139937895_139937895	0.025674	HOXD11_HOXA11	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr16_+_77822427_77822469	0.0255415	HOXD11_HOXA11	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr3_-_151176497_151176497	0.0252891	HOXD11_HOXA11	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr9_+_35658262_35658372	0.0252643	HOXD11_HOXA11	ENST00000378407.3|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107 	ENST00000378406.1|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107 	ENST00000426546.2|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107 	ENST00000327351.2|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107 	ENST00000421582.2|CCDC107|ENSG00000159884.7|coiled-coil domain containing 107
hg19_v2_chr9_+_103189536_103189601	0.0250775	HOXD11_HOXA11	ENST00000374885.1|MSANTD3|ENSG00000066697.10|Myb/SANT-like DNA-binding domain containing 3
hg19_v2_chr1_-_89641680_89641723	0.0250113	HOXD11_HOXA11	ENST00000294671.2|GBP7|ENSG00000213512.1|guanylate binding protein 7
hg19_v2_chr15_-_66797172_66797221	0.0248992	HOXD11_HOXA11	ENST00000569438.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000569696.1|RPL4|ENSG00000174444.10|ribosomal protein L4 	ENST00000307961.6|RPL4|ENSG00000174444.10|ribosomal protein L4
hg19_v2_chr3_-_196242233_196242240	0.0248751	HOXD11_HOXA11	ENST00000397537.2|SMCO1|ENSG00000214097.4|single-pass membrane protein with coiled-coil domains 1
hg19_v2_chr4_-_103998439_103998493	0.0248438	HOXD11_HOXA11	ENST00000503230.1|SLC9B2|ENSG00000164038.10|solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 	ENST00000503818.1|SLC9B2|ENSG00000164038.10|solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
hg19_v2_chr9_+_103189405_103189455	0.0247885	HOXD11_HOXA11	ENST00000395067.2|MSANTD3|ENSG00000066697.10|Myb/SANT-like DNA-binding domain containing 3
hg19_v2_chr4_-_103998060_103998170	0.0244564	HOXD11_HOXA11	ENST00000339611.4|SLC9B2|ENSG00000164038.10|solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2
hg19_v2_chr9_+_93564191_93564231	0.0244121	HOXD11_HOXA11	ENST00000375747.1|SYK|ENSG00000165025.10|spleen tyrosine kinase
hg19_v2_chr6_-_166582107_166582188	0.0242983	HOXD11_HOXA11	ENST00000296946.2|T|ENSG00000164458.5|T, brachyury homolog (mouse) 	ENST00000461348.2|T|ENSG00000164458.5|T, brachyury homolog (mouse) 	ENST00000366871.3|T|ENSG00000164458.5|T, brachyury homolog (mouse)
hg19_v2_chr1_+_40974431_40974447	0.0242613	HOXD11_HOXA11	ENST00000296380.4|EXO5|ENSG00000164002.7|exonuclease 5 	ENST00000432259.1|EXO5|ENSG00000164002.7|exonuclease 5 	ENST00000418186.1|EXO5|ENSG00000164002.7|exonuclease 5
hg19_v2_chr1_-_178840157_178840187	0.023663	HOXD11_HOXA11	ENST00000367629.1|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1 	ENST00000234816.2|ANGPTL1|ENSG00000116194.8|angiopoietin-like 1
hg19_v2_chr1_+_231297798_231297858	0.0231091	HOXD11_HOXA11	ENST00000444294.3|TRIM67|ENSG00000119283.11|tripartite motif containing 67
hg19_v2_chr10_-_61122220_61122358	0.0229423	HOXD11_HOXA11	ENST00000422313.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000435852.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000442566.3|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000373868.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000277705.6|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000373867.3|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C 	ENST00000419214.2|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C
hg19_v2_chr4_+_86749045_86749070	0.0229356	HOXD11_HOXA11	ENST00000514229.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr20_-_34287103_34287118	0.022887	HOXD11_HOXA11	ENST00000374085.1|NFS1|ENSG00000244005.8|NFS1 cysteine desulfurase 	ENST00000419569.1|NFS1|ENSG00000244005.8|NFS1 cysteine desulfurase
hg19_v2_chr17_-_26684473_26684571	0.0227516	HOXD11_HOXA11	ENST00000540200.1|POLDIP2|ENSG00000004142.7|polymerase (DNA-directed), delta interacting protein 2
hg19_v2_chrX_+_56590002_56590072	0.022438	HOXD11_HOXA11	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr2_-_233415220_233415233	0.0223167	HOXD11_HOXA11	ENST00000408957.3|TIGD1|ENSG00000221944.3|tigger transposable element derived 1
hg19_v2_chr10_+_52152766_52152766	0.0222895	HOXD11_HOXA11	ENST00000596442.1|AC069547.2|ENSG00000269700.1|Uncharacterized protein
hg19_v2_chr2_-_217236750_217236798	0.0221036	HOXD11_HOXA11	ENST00000273067.4|MARCH4|ENSG00000144583.4|membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
hg19_v2_chr4_-_84376953_84377040	0.0220599	HOXD11_HOXA11	ENST00000510985.1|HELQ|ENSG00000163312.6|helicase, POLQ-like 	ENST00000295488.3|HELQ|ENSG00000163312.6|helicase, POLQ-like
hg19_v2_chr18_+_70536215_70536275	0.0220522	HOXD11_HOXA11	ENST00000578967.1|RP11-676J15.1|ENSG00000263958.1|RP11-676J15.1
hg19_v2_chr8_-_91095099_91095113	0.0215591	HOXD11_HOXA11	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chr15_+_54901540_54901540	0.0213928	HOXD11_HOXA11	ENST00000539562.2|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr22_+_38142235_38142297	0.021346	HOXD11_HOXA11	ENST00000407319.2|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein 	ENST00000403663.2|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein 	ENST00000428075.1|TRIOBP|ENSG00000100106.15|TRIO and F-actin binding protein
hg19_v2_chr20_+_36405665_36405675	0.021246	HOXD11_HOXA11	ENST00000373469.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr5_-_159846399_159846412	0.0210085	HOXD11_HOXA11	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr1_-_169703203_169703227	0.0209657	HOXD11_HOXA11	ENST00000333360.7|SELE|ENSG00000007908.11|selectin E 	ENST00000367781.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367782.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367780.4|SELE|ENSG00000007908.11|selectin E 	ENST00000367779.4|SELE|ENSG00000007908.11|selectin E
hg19_v2_chr12_+_4758264_4758314	0.0208853	HOXD11_HOXA11	ENST00000266544.5|NDUFA9|ENSG00000139180.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
hg19_v2_chr10_-_27530997_27531065	0.0206524	HOXD11_HOXA11	ENST00000375901.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5 	ENST00000412279.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5 	ENST00000375905.4|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr2_-_37544209_37544230	0.0205897	HOXD11_HOXA11	ENST00000234179.2|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr10_+_32856764_32856764	0.020386	HOXD11_HOXA11	ENST00000375030.2|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA. 	ENST00000375028.3|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
hg19_v2_chr1_-_9129631_9129664	0.0201166	HOXD11_HOXA11	ENST00000377414.3|SLC2A5|ENSG00000142583.13|solute carrier family 2 (facilitated glucose/fructose transporter), member 5
hg19_v2_chr22_+_30821732_30821782	0.0200876	HOXD11_HOXA11	ENST00000355143.4|MTFP1|ENSG00000242114.1|mitochondrial fission process 1
hg19_v2_chr11_-_26593649_26593670	0.0199236	HOXD11_HOXA11	ENST00000455601.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr11_-_118095718_118095753	0.0197859	HOXD11_HOXA11	ENST00000526620.1|AMICA1|ENSG00000160593.13|adhesion molecule, interacts with CXADR antigen 1
hg19_v2_chr11_-_104972158_104972190	0.019745	HOXD11_HOXA11	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr13_+_53029564_53029650	0.0194941	HOXD11_HOXA11	ENST00000468284.1|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378034.3|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000258607.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2 	ENST00000378037.5|CKAP2|ENSG00000136108.10|cytoskeleton associated protein 2
hg19_v2_chr4_+_74606223_74606293	0.0190431	HOXD11_HOXA11	ENST00000307407.3|IL8|ENSG00000169429.6|interleukin 8 	ENST00000401931.1|IL8|ENSG00000169429.6|interleukin 8
hg19_v2_chr10_+_118187379_118187397	0.0186872	HOXD11_HOXA11	ENST00000369230.3|PNLIPRP3|ENSG00000203837.4|pancreatic lipase-related protein 3
hg19_v2_chr8_-_18666360_18666410	0.0185199	HOXD11_HOXA11	ENST00000286485.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr12_-_49961883_49961936	0.0184422	HOXD11_HOXA11	ENST00000553173.1|MCRS1|ENSG00000187778.9|microspherule protein 1 	ENST00000550165.1|MCRS1|ENSG00000187778.9|microspherule protein 1 	ENST00000546244.1|MCRS1|ENSG00000187778.9|microspherule protein 1 	ENST00000343810.4|MCRS1|ENSG00000187778.9|microspherule protein 1
hg19_v2_chr14_-_64108537_64108597	0.018404	HOXD11_HOXA11	ENST00000554717.1|WDR89|ENSG00000140006.7|WD repeat domain 89 	ENST00000394942.2|WDR89|ENSG00000140006.7|WD repeat domain 89
hg19_v2_chr6_+_88032299_88032350	0.0182599	HOXD11_HOXA11	ENST00000608353.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000392863.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000229570.5|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608525.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608868.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8
hg19_v2_chr8_+_125486939_125487026	0.0179237	HOXD11_HOXA11	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr10_-_50396407_50396424	0.017641	HOXD11_HOXA11	ENST00000374153.2|C10orf128|ENSG00000204161.9|chromosome 10 open reading frame 128 	ENST00000374151.3|C10orf128|ENSG00000204161.9|chromosome 10 open reading frame 128
hg19_v2_chr7_-_105516923_105516982	0.0175789	HOXD11_HOXA11	ENST00000478915.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr11_-_114430570_114430581	0.0175672	HOXD11_HOXA11	ENST00000251921.2|NXPE1|ENSG00000095110.3|neurexophilin and PC-esterase domain family, member 1
hg19_v2_chr20_+_61569463_61569510	0.017377	HOXD11_HOXA11	ENST00000266069.3|GID8|ENSG00000101193.6|GID complex subunit 8
hg19_v2_chr5_+_177457525_177457537	0.0173262	HOXD11_HOXA11	ENST00000511856.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C 	ENST00000511189.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C
hg19_v2_chr17_+_33474826_33474842	0.0170333	HOXD11_HOXA11	ENST00000268876.5|UNC45B|ENSG00000141161.7|unc-45 homolog B (C. elegans) 	ENST00000433649.1|UNC45B|ENSG00000141161.7|unc-45 homolog B (C. elegans) 	ENST00000378449.1|UNC45B|ENSG00000141161.7|unc-45 homolog B (C. elegans)
hg19_v2_chr10_-_32345305_32345376	0.0169716	HOXD11_HOXA11	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr1_+_73771844_73771922	0.0169665	HOXD11_HOXA11	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr14_-_106791536_106791536	0.0167203	HOXD11_HOXA11	ENST00000390613.2|IGHV3-30|ENSG00000211953.2|immunoglobulin heavy variable 3-30
hg19_v2_chr1_-_242162375_242162409	0.0166658	HOXD11_HOXA11	ENST00000357246.3|MAP1LC3C|ENSG00000197769.5|microtubule-associated protein 1 light chain 3 gamma
hg19_v2_chr17_+_33474860_33474871	0.0164585	HOXD11_HOXA11	ENST00000394570.2|UNC45B|ENSG00000141161.7|unc-45 homolog B (C. elegans)
hg19_v2_chr12_+_64173583_64173664	0.0164415	HOXD11_HOXA11	ENST00000261234.6|TMEM5|ENSG00000118600.7|transmembrane protein 5
hg19_v2_chrX_+_133507389_133507429	0.0162728	HOXD11_HOXA11	ENST00000370800.4|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr12_+_8276224_8276237	0.0160956	HOXD11_HOXA11	ENST00000229332.5|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr9_-_21995249_21995276	0.0159865	HOXD11_HOXA11	ENST00000494262.1|CDKN2A|ENSG00000147889.12|cyclin-dependent kinase inhibitor 2A
hg19_v2_chr1_-_28527152_28527152	0.0157578	HOXD11_HOXA11	ENST00000321830.5|AL353354.1|ENSG00000215902.1|Uncharacterized protein
hg19_v2_chr17_-_73901494_73901494	0.015659	HOXD11_HOXA11	ENST00000309352.3|MRPL38|ENSG00000204316.8|mitochondrial ribosomal protein L38
hg19_v2_chr10_+_75504105_75504190	0.015619	HOXD11_HOXA11	ENST00000535742.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000546025.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000345254.4|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000540668.1|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000339365.2|SEC24C|ENSG00000176986.10|SEC24 family member C 	ENST00000411652.2|SEC24C|ENSG00000176986.10|SEC24 family member C
hg19_v2_chr1_-_43205811_43205930	0.0154801	HOXD11_HOXA11	ENST00000372539.3|CLDN19|ENSG00000164007.6|claudin 19 	ENST00000296387.1|CLDN19|ENSG00000164007.6|claudin 19 	ENST00000539749.1|CLDN19|ENSG00000164007.6|claudin 19
hg19_v2_chr6_-_32498046_32498073	0.0150373	HOXD11_HOXA11	ENST00000374975.3|HLA-DRB5|ENSG00000198502.5|major histocompatibility complex, class II, DR beta 5
hg19_v2_chr5_+_95997769_95997789	0.0149342	HOXD11_HOXA11	ENST00000338252.3|CAST|ENSG00000153113.19|calpastatin 	ENST00000508830.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr12_+_130646999_130647019	0.0149257	HOXD11_HOXA11	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr17_-_39324424_39324474	0.0148493	HOXD11_HOXA11	ENST00000391356.2|KRTAP4-3|ENSG00000196156.3|keratin associated protein 4-3
hg19_v2_chr17_-_72772462_72772511	0.0146434	HOXD11_HOXA11	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chrX_-_30595959_30595986	0.0144682	HOXD11_HOXA11	ENST00000378962.3|CXorf21|ENSG00000120280.5|chromosome X open reading frame 21
hg19_v2_chr10_-_71169031_71169044	0.0144407	HOXD11_HOXA11	ENST00000373307.1|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr16_-_18466642_18466642	0.0141684	HOXD11_HOXA11	ENST00000541810.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1  	ENST00000531453.2|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr3_+_111260980_111261016	0.013675	HOXD11_HOXA11	ENST00000438817.2|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr1_-_23521222_23521222	0.0135324	HOXD11_HOXA11	ENST00000374619.1|HTR1D|ENSG00000179546.3|5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
hg19_v2_chr1_-_67266939_67266939	0.0132594	HOXD11_HOXA11	ENST00000304526.2|INSL5|ENSG00000172410.4|insulin-like 5
hg19_v2_chr17_-_38821373_38821440	0.0131705	HOXD11_HOXA11	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr1_+_209859510_209859550	0.0123134	HOXD11_HOXA11	ENST00000367028.2|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1 	ENST00000261465.1|HSD11B1|ENSG00000117594.5|hydroxysteroid (11-beta) dehydrogenase 1
hg19_v2_chr14_+_50291993_50291993	0.0122781	HOXD11_HOXA11	ENST00000595378.1|AL627171.2|ENSG00000269832.1|HCG1786899; PRO2610; Uncharacterized protein
hg19_v2_chr18_-_3874752_3874767	0.0121729	HOXD11_HOXA11	ENST00000534970.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr3_-_197686847_197686894	0.0117393	HOXD11_HOXA11	ENST00000265239.6|IQCG|ENSG00000114473.9|IQ motif containing G
hg19_v2_chr7_-_144107320_144107320	0.0117032	HOXD11_HOXA11	ENST00000483238.1|NOBOX|ENSG00000106410.10|NOBOX oogenesis homeobox 	ENST00000467773.1|NOBOX|ENSG00000106410.10|NOBOX oogenesis homeobox
hg19_v2_chr6_+_20534672_20534745	0.0116705	HOXD11_HOXA11	ENST00000274695.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1 	ENST00000378624.4|CDKAL1|ENSG00000145996.7|CDK5 regulatory subunit associated protein 1-like 1
hg19_v2_chr10_-_103599591_103599635	0.0115225	HOXD11_HOXA11	ENST00000348850.5|KCNIP2|ENSG00000120049.14|Kv channel interacting protein 2
hg19_v2_chrX_-_40506766_40506824	0.0114919	HOXD11_HOXA11	ENST00000378421.1|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000440784.2|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000327877.5|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000378426.1|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38 	ENST00000378418.2|CXorf38|ENSG00000185753.8|chromosome X open reading frame 38
hg19_v2_chr2_+_207024306_207024392	0.0114682	HOXD11_HOXA11	ENST00000236957.5|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000392221.1|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000392222.2|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2 	ENST00000445505.1|EEF1B2|ENSG00000114942.9|eukaryotic translation elongation factor 1 beta 2
hg19_v2_chr2_+_37571845_37571874	0.0111022	HOXD11_HOXA11	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr2_+_37571717_37571779	0.0109793	HOXD11_HOXA11	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr13_+_24144509_24144589	0.0109474	HOXD11_HOXA11	ENST00000248484.4|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr6_-_138539627_138539627	0.0109465	HOXD11_HOXA11	ENST00000527246.2|PBOV1|ENSG00000254440.2|prostate and breast cancer overexpressed 1
hg19_v2_chr3_-_47023455_47023498	0.0108292	HOXD11_HOXA11	ENST00000446836.1|CCDC12|ENSG00000160799.7|coiled-coil domain containing 12 	ENST00000425441.1|CCDC12|ENSG00000160799.7|coiled-coil domain containing 12
hg19_v2_chr15_+_36887069_36887101	0.0107554	HOXD11_HOXA11	ENST00000566807.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000567389.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41 	ENST00000562877.1|C15orf41|ENSG00000186073.7|chromosome 15 open reading frame 41
hg19_v2_chr6_-_136847610_136847750	0.0106763	HOXD11_HOXA11	ENST00000454590.1|MAP7|ENSG00000135525.14|microtubule-associated protein 7 	ENST00000432797.2|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chrX_+_73164167_73164202	0.0103327	HOXD11_HOXA11	ENST00000414209.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602895.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000453317.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602546.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000602985.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding) 	ENST00000415215.1|JPX|ENSG00000225470.2|JPX transcript, XIST activator (non-protein coding)
hg19_v2_chr21_+_17792672_17792775	0.0102671	HOXD11_HOXA11	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr1_+_166958346_166958375	0.0102488	HOXD11_HOXA11	ENST00000367872.4|MAEL|ENSG00000143194.8|maelstrom spermatogenic transposon silencer
hg19_v2_chr18_+_55018044_55018044	0.00930388	HOXD11_HOXA11	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr7_+_45067265_45067276	0.00888582	HOXD11_HOXA11	ENST00000474617.1|CCM2|ENSG00000136280.11|cerebral cavernous malformation 2
hg19_v2_chr4_+_56814968_56815037	0.00887158	HOXD11_HOXA11	ENST00000422247.2|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr3_+_35722424_35722438	0.00886696	HOXD11_HOXA11	ENST00000396481.2|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr14_+_35591735_35591834	0.00876123	HOXD11_HOXA11	ENST00000604948.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000605201.1|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000250377.7|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000321130.10|KIAA0391|ENSG00000100890.11|KIAA0391 	ENST00000534898.4|KIAA0391|ENSG00000100890.11|KIAA0391
hg19_v2_chr3_+_62936098_62936146	0.00873525	HOXD11_HOXA11	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr11_-_62473706_62473775	0.00865793	HOXD11_HOXA11	ENST00000403550.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr17_+_7155819_7155942	0.0085019	HOXD11_HOXA11	ENST00000570322.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000576496.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000574841.2|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5
hg19_v2_chr7_-_48068699_48068716	0.00820764	HOXD11_HOXA11	ENST00000412142.1|SUN3|ENSG00000164744.8|Sad1 and UNC84 domain containing 3 	ENST00000395572.2|SUN3|ENSG00000164744.8|Sad1 and UNC84 domain containing 3
hg19_v2_chr10_+_51576285_51576323	0.00818081	HOXD11_HOXA11	ENST00000443446.1|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr8_-_66546439_66546451	0.0080337	HOXD11_HOXA11	ENST00000276569.3|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr3_-_121264848_121264859	0.00796435	HOXD11_HOXA11	ENST00000264233.5|POLQ|ENSG00000051341.9|polymerase (DNA directed), theta
hg19_v2_chr11_-_104827425_104827425	0.00780735	HOXD11_HOXA11	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr17_+_41150290_41150470	0.00778701	HOXD11_HOXA11	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr14_+_56127989_56128008	0.0077227	HOXD11_HOXA11	ENST00000555573.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr1_+_224544552_224544570	0.00770943	HOXD11_HOXA11	ENST00000465271.1|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4 	ENST00000366858.3|CNIH4|ENSG00000143771.7|cornichon family AMPA receptor auxiliary protein 4
hg19_v2_chr3_+_89156799_89156831	0.00758755	HOXD11_HOXA11	ENST00000452448.2|EPHA3|ENSG00000044524.6|EPH receptor A3 	ENST00000494014.1|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr12_+_101988774_101988849	0.00756247	HOXD11_HOXA11	ENST00000545503.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000536007.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000541119.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000361466.2|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000551300.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type 	ENST00000550270.1|MYBPC1|ENSG00000196091.8|myosin binding protein C, slow type
hg19_v2_chr11_+_117947724_117947753	0.00754686	HOXD11_HOXA11	ENST00000534111.1|TMPRSS4|ENSG00000137648.12|transmembrane protease, serine 4
hg19_v2_chr1_+_227127981_227128012	0.00744666	HOXD11_HOXA11	ENST00000366778.1|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000366777.3|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000458507.2|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3
hg19_v2_chr15_+_66797627_66797684	0.00743543	HOXD11_HOXA11	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr11_-_3400330_3400422	0.00724648	HOXD11_HOXA11	ENST00000427810.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000005082.9|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000534569.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000438262.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528796.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528410.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000529678.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000354599.6|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000526601.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000525502.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000533036.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000399602.4|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr19_-_45982076_45982100	0.00721176	HOXD11_HOXA11	ENST00000423698.2|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
hg19_v2_chr7_-_48068643_48068653	0.00715969	HOXD11_HOXA11	ENST00000453192.2|SUN3|ENSG00000164744.8|Sad1 and UNC84 domain containing 3
hg19_v2_chr1_-_23520755_23520755	0.00698735	HOXD11_HOXA11	ENST00000314113.3|HTR1D|ENSG00000179546.3|5-hydroxytryptamine (serotonin) receptor 1D, G protein-coupled
hg19_v2_chrX_+_78200829_78200909	0.00670562	HOXD11_HOXA11	ENST00000544091.1|P2RY10|ENSG00000078589.8|purinergic receptor P2Y, G-protein coupled, 10
hg19_v2_chr19_+_21265028_21265056	0.00659003	HOXD11_HOXA11	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr12_+_109826524_109826524	0.00652957	HOXD11_HOXA11	ENST00000431443.2|MYO1H|ENSG00000174527.5|myosin IH
hg19_v2_chr17_+_34391625_34391640	0.0064847	HOXD11_HOXA11	ENST00000004921.3|CCL18|ENSG00000006074.4|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
hg19_v2_chr14_-_75643296_75643341	0.00648459	HOXD11_HOXA11	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr11_-_67373435_67373435	0.0064328	HOXD11_HOXA11	ENST00000446232.1|C11orf72|ENSG00000184224.3|chromosome 11 open reading frame 72
hg19_v2_chr15_-_65407524_65407549	0.00626939	HOXD11_HOXA11	ENST00000559089.1|UBAP1L|ENSG00000246922.4|ubiquitin associated protein 1-like
hg19_v2_chr6_-_52109335_52109335	0.00626135	HOXD11_HOXA11	ENST00000336123.4|IL17F|ENSG00000112116.9|interleukin 17F
hg19_v2_chr4_+_44680429_44680498	0.00619443	HOXD11_HOXA11	ENST00000281543.5|GUF1|ENSG00000151806.9|GUF1 GTPase homolog (S. cerevisiae)
hg19_v2_chr2_+_54951679_54951679	0.00606782	HOXD11_HOXA11	ENST00000356458.6|EML6|ENSG00000214595.7|echinoderm microtubule associated protein like 6
hg19_v2_chr12_+_7864021_7864050	0.00606727	HOXD11_HOXA11	ENST00000345088.2|DPPA3|ENSG00000187569.2|developmental pluripotency associated 3
hg19_v2_chr17_+_41150479_41150500	0.00602897	HOXD11_HOXA11	ENST00000589913.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr14_-_70546897_70546935	0.00601836	HOXD11_HOXA11	ENST00000394330.2|SLC8A3|ENSG00000100678.14|solute carrier family 8 (sodium/calcium exchanger), member 3 	ENST00000533541.1|SLC8A3|ENSG00000100678.14|solute carrier family 8 (sodium/calcium exchanger), member 3 	ENST00000216568.7|SLC8A3|ENSG00000100678.14|solute carrier family 8 (sodium/calcium exchanger), member 3
hg19_v2_chr20_-_1974692_1974732	0.0057779	HOXD11_HOXA11	ENST00000217305.2|PDYN|ENSG00000101327.4|prodynorphin 	ENST00000539905.1|PDYN|ENSG00000101327.4|prodynorphin
hg19_v2_chr11_-_26588634_26588775	0.00557279	HOXD11_HOXA11	ENST00000436318.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated 	ENST00000281268.8|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr1_-_92949505_92949543	0.00557171	HOXD11_HOXA11	ENST00000370332.1|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr7_-_48068671_48068695	0.00548797	HOXD11_HOXA11	ENST00000297325.4|SUN3|ENSG00000164744.8|Sad1 and UNC84 domain containing 3
hg19_v2_chr3_-_38992052_38992052	0.00493023	HOXD11_HOXA11	ENST00000302328.3|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000450244.1|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000444237.2|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v2_chrX_-_33146477_33146521	0.00483209	HOXD11_HOXA11	ENST00000378677.2|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr9_-_26892765_26892822	0.00477824	HOXD11_HOXA11	ENST00000520187.1|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1 	ENST00000333916.5|CAAP1|ENSG00000120159.7|caspase activity and apoptosis inhibitor 1
hg19_v2_chr10_-_62332357_62332428	0.00459517	HOXD11_HOXA11	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr16_+_68119764_68119868	0.00431871	HOXD11_HOXA11	ENST00000570212.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000562926.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr22_-_42084863_42084913	0.00421343	HOXD11_HOXA11	ENST00000401959.1|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 	ENST00000355257.3|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v2_chr2_+_211342432_211342449	0.00410513	HOXD11_HOXA11	ENST00000430249.2|CPS1|ENSG00000021826.10|carbamoyl-phosphate synthase 1, mitochondrial
hg19_v2_chrX_+_135570046_135570073	0.00386068	HOXD11_HOXA11	ENST00000370648.3|BRS3|ENSG00000102239.4|bombesin-like receptor 3
hg19_v2_chr12_-_51611477_51611612	0.00368818	HOXD11_HOXA11	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr2_+_242750274_242750298	0.00360433	HOXD11_HOXA11	ENST00000405370.1|NEU4|ENSG00000204099.7|sialidase 4
hg19_v2_chr5_+_95997918_95998007	0.00358175	HOXD11_HOXA11	ENST00000395812.2|CAST|ENSG00000153113.19|calpastatin 	ENST00000395813.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000359176.4|CAST|ENSG00000153113.19|calpastatin 	ENST00000325674.7|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr6_+_25754927_25754980	0.00291911	HOXD11_HOXA11	ENST00000377905.4|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4 	ENST00000439485.2|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4
hg19_v2_chr9_+_12693336_12693460	0.00263319	HOXD11_HOXA11	ENST00000381137.2|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1 	ENST00000388918.5|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1
hg19_v2_chr1_+_45241109_45241182	0.00245295	HOXD11_HOXA11	ENST00000396651.3|RPS8|ENSG00000142937.7|ribosomal protein S8
hg19_v2_chr7_+_156433573_156433618	0.00228248	HOXD11_HOXA11	ENST00000311822.8|RNF32|ENSG00000105982.12|ring finger protein 32
hg19_v2_chr17_-_41132410_41132545	0.00200917	HOXD11_HOXA11	ENST00000409446.3|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like 	ENST00000409399.1|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000421990.2|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000453594.1|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like
hg19_v2_chr6_-_15548591_15548607	0.00195453	HOXD11_HOXA11	ENST00000509674.1|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr1_+_158325684_158325765	0.0019489	HOXD11_HOXA11	ENST00000368162.2|CD1E|ENSG00000158488.11|CD1e molecule
hg19_v2_chrX_-_19988382_19988416	0.00173277	HOXD11_HOXA11	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr4_+_71337834_71337921	0.00164195	HOXD11_HOXA11	ENST00000304887.5|MUC7|ENSG00000171195.6|mucin 7, secreted
hg19_v2_chr5_+_36608422_36608435	0.00146716	HOXD11_HOXA11	ENST00000381918.3|SLC1A3|ENSG00000079215.9|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v2_chr4_+_175204818_175204833	0.00145195	HOXD11_HOXA11	ENST00000503780.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chr3_-_37216055_37216075	0.00144276	HOXD11_HOXA11	ENST00000336686.4|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2
hg19_v2_chr2_-_69180083_69180102	0.001322	HOXD11_HOXA11	ENST00000328895.4|GKN2|ENSG00000183607.5|gastrokine 2
hg19_v2_chr3_+_108541608_108541624	0.00128306	HOXD11_HOXA11	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr11_-_62473776_62473816	0.00123913	HOXD11_HOXA11	ENST00000278893.7|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000407022.3|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000421906.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr7_-_76829125_76829143	0.00120875	HOXD11_HOXA11	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr2_+_177015122_177015122	0.00116611	HOXD11_HOXA11	ENST00000468418.3|HOXD3|ENSG00000128652.7|homeobox D3
hg19_v2_chr7_+_134576317_134576374	0.00115478	HOXD11_HOXA11	ENST00000424922.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000495522.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_+_90460661_90460745	0.000665547	HOXD11_HOXA11	ENST00000340281.4|ZNF326|ENSG00000162664.12|zinc finger protein 326 	ENST00000361911.5|ZNF326|ENSG00000162664.12|zinc finger protein 326 	ENST00000370447.3|ZNF326|ENSG00000162664.12|zinc finger protein 326 	ENST00000455342.2|ZNF326|ENSG00000162664.12|zinc finger protein 326
hg19_v2_chr12_+_123465218_123465295	0.000466943	HOXD11_HOXA11	ENST00000412505.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000439686.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr4_-_103746924_103746946	0.000357531	HOXD11_HOXA11	ENST00000505207.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000502404.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000507845.1|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr7_+_128784712_128784712	0.00018867	HOXD11_HOXA11	ENST00000289407.4|TSPAN33|ENSG00000158457.4|tetraspanin 33
hg19_v2_chr11_-_3400442_3400453	7.93944e-05	HOXD11_HOXA11	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
