hg19_v2_chr21_+_43619796_43619811	1.06205	MSX1	ENST00000398457.2|ABCG1|ENSG00000160179.14|ATP-binding cassette, sub-family G (WHITE), member 1
hg19_v2_chr10_-_101380121_101380235	0.892136	MSX1	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr6_+_28249299_28249319	0.85412	MSX1	ENST00000405948.2|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr6_+_28249332_28249391	0.851056	MSX1	ENST00000259883.3|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr5_+_121647386_121647464	0.726214	MSX1	ENST00000542191.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000506272.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000508681.1|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000509154.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr22_+_41697520_41697613	0.575403	MSX1	ENST00000352645.4|ZC3H7B|ENSG00000100403.10|zinc finger CCCH-type containing 7B
hg19_v2_chr12_-_52911718_52911760	0.571217	MSX1	ENST00000548409.1|KRT5|ENSG00000186081.7|keratin 5
hg19_v2_chr19_+_3762645_3762690	0.531297	MSX1	ENST00000330133.4|MRPL54|ENSG00000183617.4|mitochondrial ribosomal protein L54
hg19_v2_chr17_-_37934466_37934481	0.526178	MSX1	ENST00000583368.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr9_+_115913222_115913266	0.52157	MSX1	ENST00000259392.3|SLC31A2|ENSG00000136867.6|solute carrier family 31 (copper transporter), member 2
hg19_v2_chr2_-_145278475_145278621	0.488042	MSX1	ENST00000558170.2|ZEB2|ENSG00000169554.12|zinc finger E-box binding homeobox 2
hg19_v2_chr5_-_11588907_11588967	0.457912	MSX1	ENST00000513598.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2 	ENST00000503622.1|CTNND2|ENSG00000169862.14|catenin (cadherin-associated protein), delta 2
hg19_v2_chr6_+_26240561_26240628	0.436293	MSX1	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr3_-_190040223_190040264	0.409838	MSX1	ENST00000295522.3|CLDN1|ENSG00000163347.5|claudin 1
hg19_v2_chr3_-_123339343_123339401	0.3603	MSX1	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr3_-_123339418_123339473	0.354738	MSX1	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr11_-_5345582_5345582	0.347704	MSX1	ENST00000328813.2|OR51B2|ENSG00000184881.2|olfactory receptor, family 51, subfamily B, member 2
hg19_v2_chr10_+_13141585_13141603	0.34535	MSX1	ENST00000378764.2|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr3_-_123512688_123512717	0.342039	MSX1	ENST00000475616.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chrX_+_1710484_1710537	0.338362	MSX1	ENST00000313871.3|AKAP17A|ENSG00000197976.6|A kinase (PRKA) anchor protein 17A 	ENST00000381261.3|AKAP17A|ENSG00000197976.6|A kinase (PRKA) anchor protein 17A
hg19_v2_chr1_-_149908217_149908248	0.333169	MSX1	ENST00000369140.3|MTMR11|ENSG00000014914.15|myotubularin related protein 11
hg19_v2_chr8_+_30244580_30244749	0.311424	MSX1	ENST00000523115.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000519647.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr18_+_61637159_61637483	0.296998	MSX1	ENST00000397985.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000353706.2|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000542677.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000397988.3|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8 	ENST00000448851.1|SERPINB8|ENSG00000166401.9|serpin peptidase inhibitor, clade B (ovalbumin), member 8
hg19_v2_chr2_+_196313239_196313256	0.295485	MSX1	ENST00000413290.1|AC064834.1|ENSG00000224099.1|AC064834.1
hg19_v2_chr10_+_13142225_13142246	0.294385	MSX1	ENST00000378747.3|OPTN|ENSG00000123240.12|optineurin
hg19_v2_chr19_+_3762703_3762719	0.290082	MSX1	ENST00000589174.1|MRPL54|ENSG00000183617.4|mitochondrial ribosomal protein L54
hg19_v2_chr14_-_101295407_101295537	0.289886	MSX1	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr4_+_146539415_146539415	0.287876	MSX1	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr6_+_29141311_29141311	0.281555	MSX1	ENST00000377167.2|OR2J2|ENSG00000204700.3|olfactory receptor, family 2, subfamily J, member 2
hg19_v2_chr11_-_128894053_128894123	0.271619	MSX1	ENST00000392657.3|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr22_+_51176624_51176663	0.266397	MSX1	ENST00000216139.5|ACR|ENSG00000100312.6|acrosin 	ENST00000529621.1|ACR|ENSG00000100312.6|acrosin
hg19_v2_chr17_-_30228678_30228784	0.260053	MSX1	ENST00000261708.4|UTP6|ENSG00000108651.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr3_+_171561127_171561306	0.25531	MSX1	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr14_+_77582905_77582916	0.241736	MSX1	ENST00000557408.1|TMEM63C|ENSG00000165548.6|transmembrane protein 63C
hg19_v2_chr7_-_16840820_16841011	0.241057	MSX1	ENST00000450569.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr8_-_25281747_25281779	0.240991	MSX1	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr12_+_9980069_9980087	0.240863	MSX1	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr18_-_5396271_5396333	0.237483	MSX1	ENST00000579951.1|EPB41L3|ENSG00000082397.11|erythrocyte membrane protein band 4.1-like 3
hg19_v2_chr19_+_16059818_16059818	0.224614	MSX1	ENST00000322107.1|OR10H4|ENSG00000176231.1|olfactory receptor, family 10, subfamily H, member 4
hg19_v2_chr7_-_20256965_20257034	0.221408	MSX1	ENST00000400331.5|MACC1|ENSG00000183742.8|metastasis associated in colon cancer 1 	ENST00000332878.4|MACC1|ENSG00000183742.8|metastasis associated in colon cancer 1
hg19_v2_chr12_+_105380073_105380122	0.217849	MSX1	ENST00000552951.1|C12orf45|ENSG00000151131.5|chromosome 12 open reading frame 45 	ENST00000280749.5|C12orf45|ENSG00000151131.5|chromosome 12 open reading frame 45
hg19_v2_chr15_-_77712477_77712499	0.21212	MSX1	ENST00000560626.2|PEAK1|ENSG00000173517.6|pseudopodium-enriched atypical kinase 1
hg19_v2_chr11_-_102496063_102496063	0.200346	MSX1	ENST00000260228.2|MMP20|ENSG00000137674.3|matrix metallopeptidase 20
hg19_v2_chr1_+_224370873_224370968	0.19898	MSX1	ENST00000323699.4|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1 	ENST00000391877.3|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1
hg19_v2_chr17_-_8113542_8113572	0.198923	MSX1	ENST00000578549.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000535053.1|AURKB|ENSG00000178999.8|aurora kinase B 	ENST00000582368.1|AURKB|ENSG00000178999.8|aurora kinase B
hg19_v2_chr15_-_95870310_95870344	0.195328	MSX1	ENST00000508732.2|CTD-2536I1.1|ENSG00000248441.2|CTD-2536I1.1
hg19_v2_chr11_-_92931098_92931173	0.194641	MSX1	ENST00000326402.4|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr2_-_209028300_209028316	0.189252	MSX1	ENST00000304502.4|CRYGA|ENSG00000168582.4|crystallin, gamma A
hg19_v2_chr7_-_32338917_32338946	0.187761	MSX1	ENST00000396193.1|PDE1C|ENSG00000154678.12|phosphodiesterase 1C, calmodulin-dependent 70kDa
hg19_v2_chr4_-_120243545_120243562	0.187294	MSX1	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr9_-_128246769_128246780	0.186547	MSX1	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr5_+_102594403_102594445	0.178732	MSX1	ENST00000319933.2|C5orf30|ENSG00000181751.5|chromosome 5 open reading frame 30
hg19_v2_chr2_-_88927092_88927099	0.176859	MSX1	ENST00000303236.3|EIF2AK3|ENSG00000172071.7|eukaryotic translation initiation factor 2-alpha kinase 3
hg19_v2_chr9_+_133539981_133539981	0.176453	MSX1	ENST00000253008.2|PRDM12|ENSG00000130711.3|PR domain containing 12
hg19_v2_chr12_+_54422142_54422239	0.171201	MSX1	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr19_+_18303992_18304039	0.169225	MSX1	ENST00000599612.2|MPV17L2|ENSG00000254858.5|MPV17 mitochondrial membrane protein-like 2
hg19_v2_chr2_-_158345462_158345480	0.164877	MSX1	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr20_+_56964253_56964369	0.16186	MSX1	ENST00000395802.3|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr10_-_29923893_29923907	0.161663	MSX1	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr14_-_75389975_75390099	0.156974	MSX1	ENST00000555647.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1 	ENST00000557413.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr5_+_67586465_67586534	0.156848	MSX1	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr15_+_51669444_51669479	0.153532	MSX1	ENST00000396399.2|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr3_+_114012819_114012833	0.146807	MSX1	ENST00000383671.3|TIGIT|ENSG00000181847.7|T cell immunoreceptor with Ig and ITIM domains
hg19_v2_chr1_-_160492994_160493057	0.146249	MSX1	ENST00000368055.1|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368057.3|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368059.3|SLAMF6|ENSG00000162739.9|SLAM family member 6
hg19_v2_chr10_-_43892668_43892794	0.146061	MSX1	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr17_-_39150385_39150417	0.143156	MSX1	ENST00000391586.1|KRTAP3-3|ENSG00000212899.1|keratin associated protein 3-3
hg19_v2_chr1_+_160160283_160160292	0.136894	MSX1	ENST00000368079.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr3_-_47555167_47555251	0.131809	MSX1	ENST00000296149.4|ELP6|ENSG00000163832.11|elongator acetyltransferase complex subunit 6
hg19_v2_chr1_+_160160346_160160401	0.131107	MSX1	ENST00000368078.3|CASQ1|ENSG00000143318.8|calsequestrin 1 (fast-twitch, skeletal muscle)
hg19_v2_chr9_+_44868935_44868935	0.127795	MSX1	ENST00000448436.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr13_-_38172863_38172981	0.126784	MSX1	ENST00000541481.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379743.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379742.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379749.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000541179.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379747.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor
hg19_v2_chr7_+_148287657_148287657	0.124658	MSX1	ENST00000307003.2|C7orf33|ENSG00000170279.2|chromosome 7 open reading frame 33
hg19_v2_chr17_-_48785216_48785291	0.123781	MSX1	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr1_+_46805832_46805874	0.123179	MSX1	ENST00000474844.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr10_+_135204338_135204338	0.121977	MSX1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr10_+_32873190_32873190	0.118284	MSX1	ENST00000375025.4|C10orf68|ENSG00000150076.18|Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
hg19_v2_chr8_+_97597148_97597173	0.118216	MSX1	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr12_+_7864021_7864050	0.118038	MSX1	ENST00000345088.2|DPPA3|ENSG00000187569.2|developmental pluripotency associated 3
hg19_v2_chr6_-_32784687_32784839	0.11678	MSX1	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr3_-_21792838_21792927	0.11656	MSX1	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr11_-_124190184_124190184	0.116376	MSX1	ENST00000357438.2|OR8D2|ENSG00000197263.2|olfactory receptor, family 8, subfamily D, member 2
hg19_v2_chr1_+_158815588_158815691	0.115245	MSX1	ENST00000438394.1|MNDA|ENSG00000163563.7|myeloid cell nuclear differentiation antigen
hg19_v2_chr5_-_147162078_147162106	0.114121	MSX1	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr6_+_134758827_134758863	0.10864	MSX1	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr16_-_9030515_9030586	0.108167	MSX1	ENST00000535863.1|USP7|ENSG00000187555.10|ubiquitin specific peptidase 7 (herpes virus-associated) 	ENST00000381886.4|USP7|ENSG00000187555.10|ubiquitin specific peptidase 7 (herpes virus-associated)
hg19_v2_chr11_+_45825616_45825645	0.107599	MSX1	ENST00000442528.2|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1 	ENST00000456334.1|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1 	ENST00000526817.1|SLC35C1|ENSG00000181830.7|solute carrier family 35 (GDP-fucose transporter), member C1
hg19_v2_chr22_+_30477000_30477000	0.106368	MSX1	ENST00000403975.1|HORMAD2|ENSG00000176635.13|HORMA domain containing 2
hg19_v2_chr6_+_131958436_131958525	0.0981172	MSX1	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr20_+_5987890_5987904	0.0973756	MSX1	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr11_+_61197508_61197545	0.0961667	MSX1	ENST00000541135.1|RP11-286N22.8|ENSG00000256591.1|Uncharacterized protein  	ENST00000301761.2|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr2_-_109605663_109605828	0.095845	MSX1	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr16_+_69345243_69345312	0.0940688	MSX1	ENST00000254950.11|VPS4A|ENSG00000132612.14|vacuolar protein sorting 4 homolog A (S. cerevisiae)
hg19_v2_chr12_+_106751436_106751539	0.0940336	MSX1	ENST00000228347.4|POLR3B|ENSG00000013503.5|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v2_chr8_-_121824374_121824391	0.0906375	MSX1	ENST00000517992.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr12_-_52604607_52604639	0.0905313	MSX1	ENST00000551894.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80 	ENST00000553017.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80
hg19_v2_chr18_-_3874271_3874337	0.0865642	MSX1	ENST00000400149.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400155.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400150.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr8_+_117963190_117963224	0.0861303	MSX1	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr18_-_70532906_70532934	0.0840305	MSX1	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr4_-_57547454_57547469	0.082207	MSX1	ENST00000556376.2|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr8_-_72274095_72274116	0.0819413	MSX1	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr6_+_118869452_118869475	0.0808659	MSX1	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr19_-_53757941_53758088	0.0805398	MSX1	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr14_+_31046959_31046972	0.0801146	MSX1	ENST00000547532.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase 	ENST00000555429.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase
hg19_v2_chr2_+_12246664_12246710	0.0781351	MSX1	ENST00000449986.1|AC096559.1|ENSG00000224184.1|AC096559.1
hg19_v2_chr15_-_76304731_76304785	0.0762247	MSX1	ENST00000394907.3|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr5_+_82767487_82767510	0.0751367	MSX1	ENST00000343200.5|VCAN|ENSG00000038427.11|versican 	ENST00000342785.4|VCAN|ENSG00000038427.11|versican
hg19_v2_chr1_-_2461684_2461710	0.0749944	MSX1	ENST00000378453.3|HES5|ENSG00000197921.5|hes family bHLH transcription factor 5
hg19_v2_chr18_-_3874247_3874262	0.073043	MSX1	ENST00000581699.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr4_+_113568207_113568367	0.0725624	MSX1	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr1_-_226595741_226595818	0.0723877	MSX1	ENST00000366794.5|PARP1|ENSG00000143799.8|poly (ADP-ribose) polymerase 1 	ENST00000366792.1|PARP1|ENSG00000143799.8|poly (ADP-ribose) polymerase 1 	ENST00000366791.5|PARP1|ENSG00000143799.8|poly (ADP-ribose) polymerase 1
hg19_v2_chr6_+_26020672_26020718	0.0721864	MSX1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr6_+_28092338_28092412	0.0713766	MSX1	ENST00000340487.4|ZSCAN16|ENSG00000196812.4|zinc finger and SCAN domain containing 16
hg19_v2_chr16_+_21689835_21689835	0.0699592	MSX1	ENST00000286149.4|OTOA|ENSG00000155719.12|otoancorin 	ENST00000388958.3|OTOA|ENSG00000155719.12|otoancorin
hg19_v2_chr1_-_72566613_72566642	0.0690527	MSX1	ENST00000306821.3|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr11_-_85376121_85376181	0.0674049	MSX1	ENST00000527447.1|CREBZF|ENSG00000137504.9|CREB/ATF bZIP transcription factor
hg19_v2_chr20_+_56964169_56964182	0.0667835	MSX1	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr18_-_47721447_47721474	0.0658628	MSX1	ENST00000285039.7|MYO5B|ENSG00000167306.14|myosin VB
hg19_v2_chr21_+_33671160_33671172	0.0651262	MSX1	ENST00000303645.5|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr2_-_77749474_77749518	0.065009	MSX1	ENST00000409093.1|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4 	ENST00000409088.3|LRRTM4|ENSG00000176204.9|leucine rich repeat transmembrane neuronal 4
hg19_v2_chr5_+_82767583_82767744	0.0640527	MSX1	ENST00000512590.2|VCAN|ENSG00000038427.11|versican 	ENST00000513960.1|VCAN|ENSG00000038427.11|versican 	ENST00000513984.1|VCAN|ENSG00000038427.11|versican 	ENST00000502527.2|VCAN|ENSG00000038427.11|versican
hg19_v2_chr10_+_90346519_90346519	0.0634787	MSX1	ENST00000371939.3|LIPJ|ENSG00000204022.5|lipase, family member J
hg19_v2_chr5_-_138739739_138739793	0.0617027	MSX1	ENST00000514983.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000507779.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000451821.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000450845.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000509959.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000302091.5|SPATA24|ENSG00000170469.6|spermatogenesis associated 24
hg19_v2_chr5_+_150404904_150404928	0.0602551	MSX1	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chrX_-_14891150_14891201	0.058317	MSX1	ENST00000452869.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000398334.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000324138.3|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B
hg19_v2_chr2_+_202098203_202098256	0.0557623	MSX1	ENST00000450491.1|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase 	ENST00000440732.1|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase 	ENST00000392258.3|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase
hg19_v2_chrY_-_2655644_2655740	0.0532733	MSX1	ENST00000525526.2|SRY|ENSG00000184895.6|sex determining region Y 	ENST00000534739.2|SRY|ENSG00000184895.6|sex determining region Y 	ENST00000383070.1|SRY|ENSG00000184895.6|sex determining region Y
hg19_v2_chrX_+_134654540_134654591	0.0522243	MSX1	ENST00000370752.4|DDX26B|ENSG00000165359.10|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
hg19_v2_chr3_+_93781728_93781760	0.0521872	MSX1	ENST00000314622.4|NSUN3|ENSG00000178694.5|NOP2/Sun domain family, member 3
hg19_v2_chr14_+_52327109_52327132	0.0503938	MSX1	ENST00000335281.4|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chr12_-_82752565_82752579	0.0501234	MSX1	ENST00000256151.7|CCDC59|ENSG00000133773.7|coiled-coil domain containing 59
hg19_v2_chr16_-_71518504_71518542	0.0501153	MSX1	ENST00000565100.2|ZNF19|ENSG00000157429.11|zinc finger protein 19
hg19_v2_chr11_+_61197572_61197620	0.0495383	MSX1	ENST00000542074.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000534878.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000537782.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000543265.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr2_+_158114051_158114110	0.0482228	MSX1	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr11_+_62037622_62037637	0.0480059	MSX1	ENST00000227918.2|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2 	ENST00000525380.1|SCGB2A2|ENSG00000110484.6|secretoglobin, family 2A, member 2
hg19_v2_chr13_-_88323218_88323434	0.0465115	MSX1	ENST00000436290.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000453832.2|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding) 	ENST00000606590.1|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding)
hg19_v2_chr12_-_11150474_11150474	0.0456418	MSX1	ENST00000538986.1|TAS2R20|ENSG00000255837.1|taste receptor, type 2, member 20
hg19_v2_chr19_-_7812446_7812473	0.0455982	MSX1	ENST00000394173.4|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000301357.8|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr14_+_55595762_55595782	0.0451056	MSX1	ENST00000254301.9|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr19_-_53662257_53662319	0.0450825	MSX1	ENST00000599096.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000334197.7|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000597183.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601804.1|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000601469.2|ZNF347|ENSG00000197937.8|zinc finger protein 347 	ENST00000452676.2|ZNF347|ENSG00000197937.8|zinc finger protein 347
hg19_v2_chr2_-_31361543_31361592	0.0439757	MSX1	ENST00000349752.5|GALNT14|ENSG00000158089.10|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v2_chr2_-_169746878_169746970	0.0435768	MSX1	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr11_+_12766583_12766592	0.0369169	MSX1	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr10_-_32667660_32667735	0.0363631	MSX1	ENST00000375110.2|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr14_+_50291993_50291993	0.0353295	MSX1	ENST00000595378.1|AL627171.2|ENSG00000269832.1|HCG1786899; PRO2610; Uncharacterized protein
hg19_v2_chr6_-_109777128_109777203	0.0351078	MSX1	ENST00000358807.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1 	ENST00000358577.3|MICAL1|ENSG00000135596.13|microtubule associated monooxygenase, calponin and LIM domain containing 1
hg19_v2_chr19_-_39805976_39805976	0.0348691	MSX1	ENST00000248668.4|LRFN1|ENSG00000128011.4|leucine rich repeat and fibronectin type III domain containing 1
hg19_v2_chr14_-_75389925_75389969	0.0345372	MSX1	ENST00000556776.1|RPS6KL1|ENSG00000198208.7|ribosomal protein S6 kinase-like 1
hg19_v2_chr4_+_119810134_119810192	0.0342192	MSX1	ENST00000434046.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr6_-_32557610_32557630	0.0338845	MSX1	ENST00000360004.5|HLA-DRB1|ENSG00000196126.6|major histocompatibility complex, class II, DR beta 1
hg19_v2_chr9_+_130026756_130026871	0.0331914	MSX1	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr4_+_5527117_5527117	0.032734	MSX1	ENST00000505296.1|C4orf6|ENSG00000082929.4|chromosome 4 open reading frame 6
hg19_v2_chr4_+_5526883_5526883	0.0298255	MSX1	ENST00000195455.2|C4orf6|ENSG00000082929.4|chromosome 4 open reading frame 6
hg19_v2_chr11_+_60681346_60681431	0.0273842	MSX1	ENST00000227525.3|TMEM109|ENSG00000110108.5|transmembrane protein 109
hg19_v2_chr6_+_6588316_6588341	0.0270197	MSX1	ENST00000379953.2|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr7_+_138818490_138818541	0.0250757	MSX1	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr4_-_164534657_164534701	0.0237452	MSX1	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr1_+_8021954_8022038	0.0231153	MSX1	ENST00000377491.1|PARK7|ENSG00000116288.8|parkinson protein 7 	ENST00000377488.1|PARK7|ENSG00000116288.8|parkinson protein 7
hg19_v2_chr21_+_17792672_17792775	0.0214498	MSX1	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr14_+_52327350_52327371	0.0213873	MSX1	ENST00000555472.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2 	ENST00000556766.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chr11_-_114430570_114430581	0.0210668	MSX1	ENST00000251921.2|NXPE1|ENSG00000095110.3|neurexophilin and PC-esterase domain family, member 1
hg19_v2_chr10_+_135050908_135050908	0.0204762	MSX1	ENST00000325980.9|VENTX|ENSG00000151650.7|VENT homeobox
hg19_v2_chr6_+_131894284_131894378	0.0200775	MSX1	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr5_+_82767284_82767310	0.0196981	MSX1	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr4_-_100140331_100140409	0.0193284	MSX1	ENST00000407820.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394897.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000508558.1|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V) 	ENST00000394899.2|ADH6|ENSG00000172955.13|alcohol dehydrogenase 6 (class V)
hg19_v2_chr1_-_19426149_19426221	0.019281	MSX1	ENST00000429347.2|UBR4|ENSG00000127481.10|ubiquitin protein ligase E3 component n-recognin 4
hg19_v2_chr7_+_2636522_2636546	0.0189495	MSX1	ENST00000423196.1|IQCE|ENSG00000106012.13|IQ motif containing E
hg19_v2_chr19_+_55043977_55044008	0.0185729	MSX1	ENST00000335056.3|KIR3DX1|ENSG00000104970.6|killer cell immunoglobulin-like receptor, three domains, X1
hg19_v2_chr20_+_52824367_52824409	0.0174594	MSX1	ENST00000371419.2|PFDN4|ENSG00000101132.5|prefoldin subunit 4
hg19_v2_chr20_+_5731083_5731100	0.0150226	MSX1	ENST00000445603.1|C20orf196|ENSG00000171984.10|chromosome 20 open reading frame 196 	ENST00000442185.1|C20orf196|ENSG00000171984.10|chromosome 20 open reading frame 196
hg19_v2_chr1_-_109935819_109935979	0.0143265	MSX1	ENST00000538502.1|SORT1|ENSG00000134243.7|sortilin 1
hg19_v2_chr14_+_55595960_55595978	0.0120382	MSX1	ENST00000554715.1|LGALS3|ENSG00000131981.11|lectin, galactoside-binding, soluble, 3
hg19_v2_chr12_-_10541575_10541616	0.011062	MSX1	ENST00000540818.1|KLRK1|ENSG00000213809.4|killer cell lectin-like receptor subfamily K, member 1
hg19_v2_chr19_+_29456034_29456041	0.0101991	MSX1	ENST00000589921.1|LINC00906|ENSG00000267339.1|long intergenic non-protein coding RNA 906
hg19_v2_chr2_+_168675182_168675182	0.00997803	MSX1	ENST00000305861.1|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr5_+_140762268_140762467	0.00733781	MSX1	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chr4_+_159443024_159443056	0.00667349	MSX1	ENST00000448688.2|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr19_-_53758094_53758147	0.00655938	MSX1	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr4_+_119809984_119810024	0.00419104	MSX1	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr9_-_86593238_86593367	0.00403614	MSX1	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr19_-_7812397_7812426	0.00374462	MSX1	ENST00000593660.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000354397.6|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000593821.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000602261.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315591.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000394161.5|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000204801.8|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601256.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000601951.1|CD209|ENSG00000090659.13|CD209 molecule 	ENST00000315599.7|CD209|ENSG00000090659.13|CD209 molecule
hg19_v2_chr13_-_81801115_81801122	0.00158317	MSX1	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr1_-_54405773_54405874	0.0012869	MSX1	ENST00000371376.1|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr17_-_42441204_42441243	0.00116257	MSX1	ENST00000293443.7|FAM171A2|ENSG00000161682.10|family with sequence similarity 171, member A2
hg19_v2_chr1_+_74701062_74701099	0.000540474	MSX1	ENST00000326637.3|TNNI3K|ENSG00000116783.10|TNNI3 interacting kinase
