hg19_v2_chr4_-_16900184_16900195	1.82197	NANOG	ENST00000515064.1|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr4_-_16900217_16900230	1.79611	NANOG	ENST00000441778.2|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr4_-_16900242_16900317	1.71817	NANOG	ENST00000502640.1|LDB2|ENSG00000169744.8|LIM domain binding 2 	ENST00000506732.1|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr4_-_16900410_16900432	1.47607	NANOG	ENST00000304523.5|LDB2|ENSG00000169744.8|LIM domain binding 2
hg19_v2_chr12_-_123201337_123201439	1.16261	NANOG	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr3_-_93692781_93692910	0.946769	NANOG	ENST00000394236.3|PROS1|ENSG00000184500.10|protein S (alpha)
hg19_v2_chr3_+_32147997_32148009	0.881694	NANOG	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr15_-_78526855_78526916	0.833456	NANOG	ENST00000541759.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1 	ENST00000558130.1|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr12_-_123187890_123187911	0.753471	NANOG	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr1_+_210406121_210406162	0.712626	NANOG	ENST00000367012.3|SERTAD4|ENSG00000082497.7|SERTA domain containing 4
hg19_v2_chr6_-_119031228_119031261	0.61275	NANOG	ENST00000392500.3|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like 	ENST00000368488.5|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like 	ENST00000434604.1|CEP85L|ENSG00000111860.9|centrosomal protein 85kDa-like
hg19_v2_chr12_-_53901266_53901422	0.515688	NANOG	ENST00000609999.1|NPFF|ENSG00000139574.7|neuropeptide FF-amide peptide precursor 	ENST00000267017.3|NPFF|ENSG00000139574.7|neuropeptide FF-amide peptide precursor
hg19_v2_chr2_+_45878790_45878913	0.480127	NANOG	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr7_+_150382781_150382815	0.46654	NANOG	ENST00000223293.5|GIMAP2|ENSG00000106560.6|GTPase, IMAP family member 2 	ENST00000474605.1|GIMAP2|ENSG00000106560.6|GTPase, IMAP family member 2
hg19_v2_chr6_+_155537771_155537868	0.455852	NANOG	ENST00000275246.7|TIAM2|ENSG00000146426.13|T-cell lymphoma invasion and metastasis 2
hg19_v2_chr19_-_13213662_13213686	0.443538	NANOG	ENST00000264824.4|LYL1|ENSG00000104903.4|lymphoblastic leukemia derived sequence 1
hg19_v2_chr10_+_129845823_129845863	0.436842	NANOG	ENST00000306042.5|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr2_+_87769459_87769476	0.425803	NANOG	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr6_+_148663729_148663847	0.415725	NANOG	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr2_-_240322643_240322661	0.41406	NANOG	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr19_-_42806919_42806958	0.411376	NANOG	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr12_-_25055177_25055258	0.405915	NANOG	ENST00000538118.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr14_+_21156915_21156943	0.393158	NANOG	ENST00000397990.4|ANG|ENSG00000214274.5|angiogenin, ribonuclease, RNase A family, 5 	ENST00000555597.1|RNASE4|ENSG00000258818.2|ribonuclease, RNase A family, 4
hg19_v2_chr2_-_112237835_112237844	0.37776	NANOG	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr13_+_108922228_108922246	0.377149	NANOG	ENST00000542136.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chr8_-_27469196_27469294	0.366603	NANOG	ENST00000546343.1|CLU|ENSG00000120885.15|clusterin 	ENST00000560566.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr19_-_42806723_42806795	0.355192	NANOG	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr3_-_49851313_49851404	0.353366	NANOG	ENST00000333486.3|UBA7|ENSG00000182179.6|ubiquitin-like modifier activating enzyme 7
hg19_v2_chr8_-_27468842_27468878	0.352529	NANOG	ENST00000523500.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr19_-_42806444_42806500	0.349468	NANOG	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr8_-_27468945_27468948	0.335033	NANOG	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr1_-_147245484_147245494	0.334785	NANOG	ENST00000271348.2|GJA5|ENSG00000143140.6|gap junction protein, alpha 5, 40kDa
hg19_v2_chr14_-_98444438_98444453	0.331866	NANOG	ENST00000512901.2|C14orf64|ENSG00000246223.4|chromosome 14 open reading frame 64
hg19_v2_chr6_+_26087509_26087645	0.331823	NANOG	ENST00000397022.3|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000353147.5|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000352392.4|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000349999.4|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000317896.7|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000357618.5|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000470149.1|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000336625.8|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000461397.1|HFE|ENSG00000010704.14|hemochromatosis 	ENST00000488199.1|HFE|ENSG00000010704.14|hemochromatosis
hg19_v2_chr17_+_7387677_7387691	0.311391	NANOG	ENST00000322644.6|POLR2A|ENSG00000181222.10|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
hg19_v2_chr3_-_149093499_149093499	0.299975	NANOG	ENST00000472441.1|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr16_+_31494323_31494445	0.291061	NANOG	ENST00000569576.1|SLC5A2|ENSG00000140675.8|solute carrier family 5 (sodium/glucose cotransporter), member 2 	ENST00000330498.3|SLC5A2|ENSG00000140675.8|solute carrier family 5 (sodium/glucose cotransporter), member 2
hg19_v2_chr4_-_16077741_16077760	0.279171	NANOG	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr17_-_34417479_34417496	0.266941	NANOG	ENST00000225245.5|CCL3|ENSG00000006075.11|chemokine (C-C motif) ligand 3
hg19_v2_chr19_-_42806842_42806880	0.262254	NANOG	ENST00000596265.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr10_+_69644404_69644427	0.261494	NANOG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr17_-_7387524_7387597	0.243108	NANOG	ENST00000311403.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr1_-_205649580_205649596	0.240459	NANOG	ENST00000367145.3|SLC45A3|ENSG00000158715.5|solute carrier family 45, member 3
hg19_v2_chr3_+_132379154_132379256	0.240265	NANOG	ENST00000468022.1|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5 	ENST00000473651.1|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5 	ENST00000494238.2|UBA5|ENSG00000081307.8|ubiquitin-like modifier activating enzyme 5
hg19_v2_chr16_+_68573640_68573698	0.239745	NANOG	ENST00000398253.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573161.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr12_-_31743901_31743956	0.239326	NANOG	ENST00000354285.4|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr3_+_107244229_107244254	0.232469	NANOG	ENST00000456419.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402163.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr1_-_47655686_47655743	0.229769	NANOG	ENST00000294338.2|PDZK1IP1|ENSG00000162366.3|PDZK1 interacting protein 1
hg19_v2_chr18_+_13218769_13218792	0.228328	NANOG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr16_+_640055_640118	0.226302	NANOG	ENST00000568586.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000538492.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000248139.3|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chrX_-_107019181_107019488	0.223683	NANOG	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr19_+_42381173_42381198	0.220683	NANOG	ENST00000221972.3|CD79A|ENSG00000105369.5|CD79a molecule, immunoglobulin-associated alpha
hg19_v2_chr20_+_37554955_37555067	0.217649	NANOG	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr2_-_97405775_97405816	0.216666	NANOG	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chrX_-_118827333_118827365	0.211598	NANOG	ENST00000360156.7|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354228.4|SEPT6|ENSG00000125354.18|septin 6 	ENST00000489216.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000354416.3|SEPT6|ENSG00000125354.18|septin 6 	ENST00000394610.1|SEPT6|ENSG00000125354.18|septin 6 	ENST00000343984.5|SEPT6|ENSG00000125354.18|septin 6
hg19_v2_chrX_-_133931164_133931269	0.208444	NANOG	ENST00000370790.1|FAM122B|ENSG00000156504.12|family with sequence similarity 122B 	ENST00000298090.6|FAM122B|ENSG00000156504.12|family with sequence similarity 122B
hg19_v2_chr4_+_166248775_166248901	0.205963	NANOG	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr2_+_170590321_170590408	0.202895	NANOG	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr17_-_72542278_72542292	0.199046	NANOG	ENST00000330793.1|CD300C|ENSG00000167850.3|CD300c molecule
hg19_v2_chr1_-_202129105_202129140	0.198331	NANOG	ENST00000367279.4|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr14_+_67999999_68000036	0.195905	NANOG	ENST00000329153.5|PLEKHH1|ENSG00000054690.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg19_v2_chr6_+_90272027_90272120	0.193916	NANOG	ENST00000522441.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chr2_-_69664586_69664760	0.19283	NANOG	ENST00000303698.3|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000394305.1|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000410022.2|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
hg19_v2_chr19_-_54327542_54327648	0.191328	NANOG	ENST00000391775.3|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000324134.6|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000535162.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000351894.4|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000354278.3|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000391773.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000345770.5|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12 	ENST00000391772.1|NLRP12|ENSG00000142405.17|NLR family, pyrin domain containing 12
hg19_v2_chr18_+_3262954_3263072	0.187587	NANOG	ENST00000584539.1|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory
hg19_v2_chr1_-_202129704_202129772	0.181371	NANOG	ENST00000476061.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000544762.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000467283.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000464870.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000435759.2|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000486116.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000543735.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000308986.5|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000477625.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr7_+_102715315_102715380	0.178913	NANOG	ENST00000428183.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000323716.3|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000441711.2|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000454559.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000425331.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10 	ENST00000541300.1|ARMC10|ENSG00000170632.9|armadillo repeat containing 10
hg19_v2_chr6_-_20212630_20212726	0.177353	NANOG	ENST00000324607.7|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000541730.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000536798.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1
hg19_v2_chr16_+_68573116_68573228	0.176761	NANOG	ENST00000570495.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000563169.2|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000564323.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000562156.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein 	ENST00000573685.1|ZFP90|ENSG00000184939.11|ZFP90 zinc finger protein
hg19_v2_chr17_+_43224684_43224684	0.17607	NANOG	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr6_-_107077347_107077378	0.17497	NANOG	ENST00000369063.3|RTN4IP1|ENSG00000130347.8|reticulon 4 interacting protein 1 	ENST00000539449.1|RTN4IP1|ENSG00000130347.8|reticulon 4 interacting protein 1
hg19_v2_chr3_-_134369853_134369872	0.172188	NANOG	ENST00000508956.1|KY|ENSG00000174611.7|kyphoscoliosis peptidase 	ENST00000503669.1|KY|ENSG00000174611.7|kyphoscoliosis peptidase 	ENST00000423778.2|KY|ENSG00000174611.7|kyphoscoliosis peptidase
hg19_v2_chr17_+_75372165_75372357	0.171776	NANOG	ENST00000427674.2|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chrX_+_103173457_103173484	0.170582	NANOG	ENST00000419165.1|TMSB15B|ENSG00000158427.10|thymosin beta 15B
hg19_v2_chr6_-_33714667_33714697	0.170559	NANOG	ENST00000293756.4|IP6K3|ENSG00000161896.6|inositol hexakisphosphate kinase 3
hg19_v2_chr6_+_292051_292124	0.168262	NANOG	ENST00000344450.5|DUSP22|ENSG00000112679.10|dual specificity phosphatase 22
hg19_v2_chr1_+_159272111_159272136	0.163056	NANOG	ENST00000368114.1|FCER1A|ENSG00000179639.6|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
hg19_v2_chr1_+_27719148_27719184	0.162265	NANOG	ENST00000374024.3|GPR3|ENSG00000181773.6|G protein-coupled receptor 3
hg19_v2_chr16_-_70719925_70719989	0.159387	NANOG	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr1_+_47264711_47264754	0.153397	NANOG	ENST00000371923.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1 	ENST00000271153.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1 	ENST00000371919.4|CYP4B1|ENSG00000142973.8|cytochrome P450, family 4, subfamily B, polypeptide 1
hg19_v2_chr9_-_99381660_99381850	0.152323	NANOG	ENST00000375240.3|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000463569.1|CDC14B|ENSG00000081377.12|cell division cycle 14B
hg19_v2_chr1_+_161551101_161551226	0.145547	NANOG	ENST00000367962.4|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000367960.5|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000403078.3|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000428605.2|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32)
hg19_v2_chr6_-_33714752_33714763	0.14525	NANOG	ENST00000451316.1|IP6K3|ENSG00000161896.6|inositol hexakisphosphate kinase 3
hg19_v2_chr7_+_131012605_131012619	0.143556	NANOG	ENST00000446815.1|MKLN1|ENSG00000128585.13|muskelin 1, intracellular mediator containing kelch motifs 	ENST00000352689.6|MKLN1|ENSG00000128585.13|muskelin 1, intracellular mediator containing kelch motifs
hg19_v2_chr6_+_151561085_151561146	0.143039	NANOG	ENST00000402676.2|AKAP12|ENSG00000131016.12|A kinase (PRKA) anchor protein 12
hg19_v2_chr11_-_67205538_67205538	0.137935	NANOG	ENST00000326294.3|PTPRCAP|ENSG00000213402.2|protein tyrosine phosphatase, receptor type, C-associated protein
hg19_v2_chr20_-_3762087_3762100	0.137197	NANOG	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chr22_+_31090793_31090889	0.133505	NANOG	ENST00000332585.6|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000382310.3|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000446658.2|OSBP2|ENSG00000184792.11|oxysterol binding protein 2
hg19_v2_chr22_+_41487711_41487798	0.132185	NANOG	ENST00000263253.7|EP300|ENSG00000100393.9|E1A binding protein p300
hg19_v2_chr1_+_173837214_173837234	0.130625	NANOG	ENST00000367704.1|ZBTB37|ENSG00000185278.10|zinc finger and BTB domain containing 37
hg19_v2_chr17_+_7905912_7905945	0.130132	NANOG	ENST00000254854.4|GUCY2D|ENSG00000132518.6|guanylate cyclase 2D, membrane (retina-specific)
hg19_v2_chr14_+_23842018_23842070	0.129087	NANOG	ENST00000397242.2|IL25|ENSG00000166090.8|interleukin 25 	ENST00000329715.2|IL25|ENSG00000166090.8|interleukin 25
hg19_v2_chr15_+_44580955_44580972	0.122975	NANOG	ENST00000345795.2|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4 	ENST00000360824.3|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4
hg19_v2_chr19_+_51273721_51273721	0.114604	NANOG	ENST00000270590.4|GPR32|ENSG00000142511.4|G protein-coupled receptor 32
hg19_v2_chr4_+_154073469_154073645	0.112081	NANOG	ENST00000441616.1|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr12_+_69080734_69080808	0.106763	NANOG	ENST00000378905.2|NUP107|ENSG00000111581.5|nucleoporin 107kDa
hg19_v2_chr6_+_26087646_26087669	0.105043	NANOG	ENST00000309234.6|HFE|ENSG00000010704.14|hemochromatosis
hg19_v2_chr22_-_42084863_42084913	0.104915	NANOG	ENST00000401959.1|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) 	ENST00000355257.3|NHP2L1|ENSG00000100138.9|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)
hg19_v2_chr15_+_44580899_44580947	0.102081	NANOG	ENST00000559222.1|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4 	ENST00000299957.6|CASC4|ENSG00000166734.14|cancer susceptibility candidate 4
hg19_v2_chr6_-_43021437_43021485	0.101347	NANOG	ENST00000265348.3|CUL7|ENSG00000044090.4|cullin 7
hg19_v2_chr1_+_161632937_161632951	0.100809	NANOG	ENST00000236937.9|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000367961.4|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32) 	ENST00000358671.5|FCGR2B|ENSG00000072694.14|Fc fragment of IgG, low affinity IIb, receptor (CD32)
hg19_v2_chr15_+_78832747_78832820	0.100693	NANOG	ENST00000560217.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000044462.7|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559082.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559948.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000413382.2|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000559146.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4 	ENST00000558281.1|PSMA4|ENSG00000041357.11|proteasome (prosome, macropain) subunit, alpha type, 4
hg19_v2_chr1_-_145589424_145589471	0.0969908	NANOG	ENST00000334513.5|NUDT17|ENSG00000186364.7|nudix (nucleoside diphosphate linked moiety X)-type motif 17
hg19_v2_chrX_+_44703249_44703273	0.0952844	NANOG	ENST00000339042.4|DUSP21|ENSG00000189037.6|dual specificity phosphatase 21
hg19_v2_chrX_+_47092314_47092431	0.0949866	NANOG	ENST00000218348.3|USP11|ENSG00000102226.5|ubiquitin specific peptidase 11
hg19_v2_chr19_+_50084561_50084603	0.0922925	NANOG	ENST00000246794.5|PRRG2|ENSG00000126460.6|proline rich Gla (G-carboxyglutamic acid) 2
hg19_v2_chr8_+_9413410_9413451	0.0922337	NANOG	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr22_-_30662828_30662847	0.092074	NANOG	ENST00000403463.1|OSM|ENSG00000099985.3|oncostatin M 	ENST00000215781.2|OSM|ENSG00000099985.3|oncostatin M
hg19_v2_chr19_+_6372444_6372444	0.0906213	NANOG	ENST00000245812.3|ALKBH7|ENSG00000125652.3|alkB, alkylation repair homolog 7 (E. coli)
hg19_v2_chr3_-_98241358_98241489	0.0893761	NANOG	ENST00000503004.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000506575.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000513452.1|CLDND1|ENSG00000080822.12|claudin domain containing 1 	ENST00000515620.1|CLDND1|ENSG00000080822.12|claudin domain containing 1
hg19_v2_chr12_-_57410304_57410325	0.0885999	NANOG	ENST00000441881.1|TAC3|ENSG00000166863.7|tachykinin 3 	ENST00000458521.2|TAC3|ENSG00000166863.7|tachykinin 3
hg19_v2_chr6_+_52226897_52226969	0.0881579	NANOG	ENST00000442253.2|PAQR8|ENSG00000170915.8|progestin and adipoQ receptor family member VIII
hg19_v2_chr16_-_75301886_75301951	0.0877684	NANOG	ENST00000393422.2|BCAR1|ENSG00000050820.12|breast cancer anti-estrogen resistance 1
hg19_v2_chr19_+_15197791_15197791	0.0845295	NANOG	ENST00000209540.2|OR1I1|ENSG00000094661.2|olfactory receptor, family 1, subfamily I, member 1
hg19_v2_chr8_-_91095099_91095113	0.0826375	NANOG	ENST00000265431.3|CALB1|ENSG00000104327.3|calbindin 1, 28kDa
hg19_v2_chrX_+_134124968_134124984	0.0819828	NANOG	ENST00000330288.4|SMIM10|ENSG00000184785.4|small integral membrane protein 10
hg19_v2_chr5_+_139493665_139493718	0.0803474	NANOG	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr16_+_30759700_30759771	0.0790507	NANOG	ENST00000328273.7|PHKG2|ENSG00000156873.11|phosphorylase kinase, gamma 2 (testis)
hg19_v2_chr10_-_70092671_70092806	0.0783673	NANOG	ENST00000358769.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000432941.1|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000495025.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chr6_-_43021612_43021683	0.0732416	NANOG	ENST00000535468.1|CUL7|ENSG00000044090.4|cullin 7
hg19_v2_chr2_-_198650037_198650074	0.0722701	NANOG	ENST00000392296.4|BOLL|ENSG00000152430.13|boule-like RNA-binding protein
hg19_v2_chr3_-_52567792_52567815	0.0674725	NANOG	ENST00000307092.4|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000422318.2|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000459839.1|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2
hg19_v2_chr10_+_5566916_5566932	0.0649354	NANOG	ENST00000315238.1|CALML3|ENSG00000178363.3|calmodulin-like 3
hg19_v2_chr20_+_36974759_36974892	0.0647341	NANOG	ENST00000217407.2|LBP|ENSG00000129988.5|lipopolysaccharide binding protein
hg19_v2_chr5_-_55290773_55290855	0.0620746	NANOG	ENST00000502326.3|IL6ST|ENSG00000134352.15|interleukin 6 signal transducer (gp130, oncostatin M receptor) 	ENST00000381298.2|IL6ST|ENSG00000134352.15|interleukin 6 signal transducer (gp130, oncostatin M receptor)
hg19_v2_chr16_+_640201_640332	0.0614326	NANOG	ENST00000563109.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chr19_-_39926555_39926593	0.0597403	NANOG	ENST00000599539.1|RPS16|ENSG00000105193.4|ribosomal protein S16 	ENST00000339471.4|RPS16|ENSG00000105193.4|ribosomal protein S16 	ENST00000601655.1|RPS16|ENSG00000105193.4|ribosomal protein S16 	ENST00000251453.3|RPS16|ENSG00000105193.4|ribosomal protein S16
hg19_v2_chr10_+_102891048_102891078	0.059036	NANOG	ENST00000467928.2|TLX1|ENSG00000107807.8|T-cell leukemia homeobox 1
hg19_v2_chr18_+_3262415_3262611	0.0581033	NANOG	ENST00000581193.1|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory 	ENST00000400175.5|MYL12B|ENSG00000118680.8|myosin, light chain 12B, regulatory
hg19_v2_chr8_-_42751820_42751874	0.0571757	NANOG	ENST00000526349.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000527424.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000534961.1|RNF170|ENSG00000120925.9|ring finger protein 170 	ENST00000319073.4|RNF170|ENSG00000120925.9|ring finger protein 170
hg19_v2_chrX_+_103357202_103357232	0.0568426	NANOG	ENST00000537356.3|ZCCHC18|ENSG00000166707.6|zinc finger, CCHC domain containing 18
hg19_v2_chr20_+_43343517_43343580	0.0565414	NANOG	ENST00000372865.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr19_+_37825614_37825641	0.0546933	NANOG	ENST00000591259.1|HKR1|ENSG00000181666.13|HKR1, GLI-Kruppel zinc finger family member 	ENST00000590582.1|HKR1|ENSG00000181666.13|HKR1, GLI-Kruppel zinc finger family member
hg19_v2_chr19_-_36870087_36870110	0.0546623	NANOG	ENST00000270001.7|ZFP14|ENSG00000142065.9|ZFP14 zinc finger protein
hg19_v2_chr4_+_154074217_154074270	0.0532499	NANOG	ENST00000437508.2|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr1_+_173837488_173837532	0.0503777	NANOG	ENST00000427304.1|ZBTB37|ENSG00000185278.10|zinc finger and BTB domain containing 37 	ENST00000432989.1|ZBTB37|ENSG00000185278.10|zinc finger and BTB domain containing 37 	ENST00000367702.1|ZBTB37|ENSG00000185278.10|zinc finger and BTB domain containing 37
hg19_v2_chr12_-_52946923_52946931	0.0496561	NANOG	ENST00000267119.5|KRT71|ENSG00000139648.6|keratin 71
hg19_v2_chr10_+_64133934_64133954	0.0472105	NANOG	ENST00000395254.3|ZNF365|ENSG00000138311.11|zinc finger protein 365 	ENST00000395255.3|ZNF365|ENSG00000138311.11|zinc finger protein 365 	ENST00000410046.3|ZNF365|ENSG00000138311.11|zinc finger protein 365
hg19_v2_chr20_+_43343476_43343487	0.0448723	NANOG	ENST00000372868.2|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr10_-_1034237_1034289	0.0430939	NANOG	ENST00000381466.1|AL359878.1|ENSG00000205740.1|Uncharacterized protein
hg19_v2_chr1_-_155959853_155959881	0.043032	NANOG	ENST00000462460.2|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2 	ENST00000368316.1|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr19_+_8455200_8455301	0.0390395	NANOG	ENST00000601897.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family 	ENST00000594216.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr17_-_56606664_56606684	0.0355728	NANOG	ENST00000580844.1|SEPT4|ENSG00000108387.10|septin 4
hg19_v2_chr6_+_88032299_88032350	0.0353912	NANOG	ENST00000608353.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000392863.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000229570.5|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608525.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8 	ENST00000608868.1|SMIM8|ENSG00000111850.6|small integral membrane protein 8
hg19_v2_chr16_+_6069072_6069132	0.0353629	NANOG	ENST00000547605.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000550418.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000553186.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr3_+_23847394_23847423	0.0342669	NANOG	ENST00000306627.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chrX_+_85403445_85403479	0.0320189	NANOG	ENST00000373131.1|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr2_+_64681641_64681683	0.0309281	NANOG	ENST00000409537.2|LGALSL|ENSG00000119862.8|lectin, galactoside-binding-like
hg19_v2_chr12_-_69080590_69080644	0.0290903	NANOG	ENST00000433116.2|RP11-637A17.2|ENSG00000247363.2|RP11-637A17.2	ENST00000500695.2|RP11-637A17.2|ENSG00000247363.2|RP11-637A17.2
hg19_v2_chr6_-_136610911_136610990	0.0289588	NANOG	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr1_+_36348790_36348822	0.0265678	NANOG	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chrX_-_120066151_120066151	0.0260385	NANOG	ENST00000419982.2|CT47A12|ENSG00000226685.2|cancer/testis antigen family 47, member A12 	ENST00000416816.1|CT47A12|ENSG00000226685.2|cancer/testis antigen family 47, member A12
hg19_v2_chr6_-_131277510_131277625	0.0255717	NANOG	ENST00000525193.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2 	ENST00000527659.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr15_+_73976715_73976843	0.0252042	NANOG	ENST00000558689.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000560786.2|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561213.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000563584.1|CD276|ENSG00000103855.13|CD276 molecule 	ENST00000561416.1|CD276|ENSG00000103855.13|CD276 molecule
hg19_v2_chr19_-_39926268_39926345	0.0241835	NANOG	ENST00000599705.1|RPS16|ENSG00000105193.4|ribosomal protein S16
hg19_v2_chr20_+_43343886_43344020	0.0207403	NANOG	ENST00000190983.4|WISP2|ENSG00000064205.6|WNT1 inducible signaling pathway protein 2
hg19_v2_chr22_+_26565440_26565624	0.0177355	NANOG	ENST00000404234.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000529632.2|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000360929.3|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000248933.6|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like 	ENST00000343706.4|SEZ6L|ENSG00000100095.14|seizure related 6 homolog (mouse)-like
hg19_v2_chr19_+_41816053_41816178	0.0168499	NANOG	ENST00000269967.3|CCDC97|ENSG00000142039.3|coiled-coil domain containing 97
hg19_v2_chr21_-_34960930_34960944	0.0137185	NANOG	ENST00000437395.1|DONSON|ENSG00000159147.13|downstream neighbor of SON
hg19_v2_chr1_+_203097407_203097476	0.0113836	NANOG	ENST00000367235.1|ADORA1|ENSG00000163485.11|adenosine A1 receptor
hg19_v2_chr4_+_123300121_123300176	0.0108527	NANOG	ENST00000446706.1|ADAD1|ENSG00000164113.6|adenosine deaminase domain containing 1 (testis-specific) 	ENST00000296513.2|ADAD1|ENSG00000164113.6|adenosine deaminase domain containing 1 (testis-specific)
hg19_v2_chrX_-_120119638_120119642	0.00915044	NANOG	ENST00000434414.1|CT47A1|ENSG00000236371.3|cancer/testis antigen family 47, member A1 	ENST00000433030.1|CT47A1|ENSG00000236371.3|cancer/testis antigen family 47, member A1 	ENST00000371280.3|CT47A1|ENSG00000236371.3|cancer/testis antigen family 47, member A1
hg19_v2_chrX_+_85403487_85403625	0.00777574	NANOG	ENST00000373125.4|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr13_+_108921977_108922082	0.00756206	NANOG	ENST00000430559.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b 	ENST00000375887.4|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chr2_+_171673072_171673225	0.00420893	NANOG	ENST00000358196.3|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa) 	ENST00000375272.1|GAD1|ENSG00000128683.9|glutamate decarboxylase 1 (brain, 67kDa)
hg19_v2_chr12_-_123215306_123215390	0.00311749	NANOG	ENST00000356987.2|HCAR1|ENSG00000196917.4|hydroxycarboxylic acid receptor 1 	ENST00000436083.2|HCAR1|ENSG00000196917.4|hydroxycarboxylic acid receptor 1
hg19_v2_chr5_+_138089100_138089146	0.00192179	NANOG	ENST00000520339.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000355078.5|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000302763.7|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000518910.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr8_-_102181718_102181857	0.00120528	NANOG	ENST00000565617.1|KB-1460A1.5|ENSG00000261087.1|KB-1460A1.5
