hg19_v2_chr2_+_8822113_8822196	0.955951	NKX1-1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr19_+_32897009_32897095	0.463833	NKX1-1	ENST00000342179.5|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans) 	ENST00000586427.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr19_+_32896697_32896786	0.437132	NKX1-1	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr7_+_12727250_12727265	0.43182	NKX1-1	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr7_+_99717230_99717321	0.411589	NKX1-1	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chr3_-_105588231_105588396	0.38416	NKX1-1	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr4_-_54232144_54232267	0.357933	NKX1-1	ENST00000388940.4|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000503450.1|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000401642.3|SCFD2|ENSG00000184178.11|sec1 family domain containing 2
hg19_v2_chr1_+_155278539_155278559	0.319178	NKX1-1	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr1_+_155278625_155278745	0.318967	NKX1-1	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr13_+_36050881_36050887	0.287503	NKX1-1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr4_-_103682145_103682157	0.272058	NKX1-1	ENST00000226578.4|MANBA|ENSG00000109323.4|mannosidase, beta A, lysosomal
hg19_v2_chr2_+_217524323_217524341	0.258007	NKX1-1	ENST00000456764.1|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chr10_-_1095050_1095110	0.249126	NKX1-1	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr17_-_27418537_27418537	0.239322	NKX1-1	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr3_-_105587879_105587892	0.230032	NKX1-1	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr1_+_174843548_174843609	0.222215	NKX1-1	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr7_+_99647389_99647410	0.21841	NKX1-1	ENST00000543588.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000292450.4|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000456748.2|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chr7_+_2559399_2559496	0.191355	NKX1-1	ENST00000222725.5|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 	ENST00000359574.3|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg19_v2_chrX_+_55026763_55026831	0.19127	NKX1-1	ENST00000374987.3|APEX2|ENSG00000169188.4|APEX nuclease (apurinic/apyrimidinic endonuclease) 2
hg19_v2_chr3_+_158519654_158519944	0.167032	NKX1-1	ENST00000415822.2|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000392813.4|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000264266.8|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1
hg19_v2_chr2_-_97405775_97405816	0.164673	NKX1-1	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr17_+_59489112_59489112	0.155773	NKX1-1	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr11_-_124981475_124981659	0.154747	NKX1-1	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr17_+_45286387_45286455	0.153314	NKX1-1	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr12_+_28410128_28410133	0.152815	NKX1-1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr9_+_116225999_116226029	0.151393	NKX1-1	ENST00000317613.6|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr4_-_66536196_66536216	0.143751	NKX1-1	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_-_51796987_51797018	0.140198	NKX1-1	ENST00000262676.5|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr4_+_87515454_87515486	0.139857	NKX1-1	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr17_+_45286706_45286766	0.137347	NKX1-1	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr8_+_26371763_26371791	0.12962	NKX1-1	ENST00000521913.1|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr5_+_66300446_66300463	0.123505	NKX1-1	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr3_-_52567792_52567815	0.123109	NKX1-1	ENST00000307092.4|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000422318.2|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2 	ENST00000459839.1|NT5DC2|ENSG00000168268.6|5'-nucleotidase domain containing 2
hg19_v2_chrX_-_153363188_153363212	0.116607	NKX1-1	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr7_-_6048650_6048687	0.116002	NKX1-1	ENST00000382321.4|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae) 	ENST00000406569.3|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr11_-_47198380_47198448	0.10936	NKX1-1	ENST00000419701.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000526342.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000528444.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000530596.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525398.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000319543.6|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000426335.2|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000527927.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2 	ENST00000525314.1|ARFGAP2|ENSG00000149182.10|ADP-ribosylation factor GTPase activating protein 2
hg19_v2_chr7_-_6048702_6048756	0.108151	NKX1-1	ENST00000265849.7|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr6_+_26501449_26501449	0.107012	NKX1-1	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chr1_+_100818009_100818072	0.104682	NKX1-1	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr8_+_98656693_98656774	0.10011	NKX1-1	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr1_-_201140673_201140702	0.0985314	NKX1-1	ENST00000367333.2|TMEM9|ENSG00000116857.12|transmembrane protein 9
hg19_v2_chr1_+_161691353_161691353	0.0976604	NKX1-1	ENST00000367948.2|FCRLB|ENSG00000162746.10|Fc receptor-like B
hg19_v2_chr19_+_11071546_11071624	0.0954051	NKX1-1	ENST00000358026.2|SMARCA4|ENSG00000127616.13|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v2_chr9_+_34646624_34646649	0.0939105	NKX1-1	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr13_+_78315295_78315337	0.0919644	NKX1-1	ENST00000351546.3|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr17_-_57232596_57232630	0.0897547	NKX1-1	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr9_+_34646651_34646689	0.0873415	NKX1-1	ENST00000378842.3|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase
hg19_v2_chr12_+_7014126_7014192	0.0870264	NKX1-1	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr14_-_81425828_81425857	0.0852251	NKX1-1	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr7_-_86849883_86849910	0.0832977	NKX1-1	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr1_-_151762943_151763012	0.0787419	NKX1-1	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr3_+_57261743_57261824	0.0721003	NKX1-1	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr20_-_17662705_17662874	0.0711754	NKX1-1	ENST00000455029.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr12_+_102513950_102513996	0.0664139	NKX1-1	ENST00000378128.3|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000327680.2|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000541394.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000543784.1|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr17_-_57232525_57232584	0.0623761	NKX1-1	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr3_-_59035673_59035810	0.0605322	NKX1-1	ENST00000491845.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000472469.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000471288.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000295966.7|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67
hg19_v2_chr15_-_64385981_64386077	0.0604949	NKX1-1	ENST00000557835.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000380290.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000559950.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chrX_-_153363125_153363182	0.0597554	NKX1-1	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr11_-_71823715_71823792	0.0580676	NKX1-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr11_-_71823796_71823826	0.0550227	NKX1-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr15_-_64386120_64386217	0.0545737	NKX1-1	ENST00000300030.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr1_+_100818156_100818210	0.0528338	NKX1-1	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr14_-_106066376_106066546	0.0521845	NKX1-1	ENST00000412518.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000428654.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000427543.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000420153.1|AL928742.12|ENSG00000227468.4|AL928742.12	ENST00000577108.1|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon 	ENST00000576077.1|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr5_-_22853429_22853462	0.0503806	NKX1-1	ENST00000504376.2|CDH12|ENSG00000154162.9|cadherin 12, type 2 (N-cadherin 2)
hg19_v2_chr7_-_99716952_99717021	0.0477214	NKX1-1	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr17_-_8055747_8055758	0.0474713	NKX1-1	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr19_+_36249057_36249102	0.0454094	NKX1-1	ENST00000301165.5|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000536950.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000537459.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000421853.2|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55
hg19_v2_chr10_-_56561022_56561051	0.0443905	NKX1-1	ENST00000373965.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000414778.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395438.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000409834.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395445.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395446.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395442.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395440.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395432.2|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000361849.3|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395433.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000320301.6|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000395430.1|PCDH15|ENSG00000150275.13|protocadherin-related 15 	ENST00000437009.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr7_-_73256838_73256870	0.0442245	NKX1-1	ENST00000297873.4|WBSCR27|ENSG00000165171.6|Williams Beuren syndrome chromosome region 27
hg19_v2_chr4_-_66536057_66536071	0.0434624	NKX1-1	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr17_-_44657017_44657088	0.0412193	NKX1-1	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr12_+_7014064_7014075	0.0410611	NKX1-1	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr7_+_26331541_26331647	0.0409771	NKX1-1	ENST00000416246.1|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000338523.4|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000412416.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr12_+_7013897_7014045	0.040757	NKX1-1	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr18_-_44181442_44181479	0.0344993	NKX1-1	ENST00000398722.4|LOXHD1|ENSG00000167210.12|lipoxygenase homology domains 1
hg19_v2_chr3_+_186288454_186288535	0.0342542	NKX1-1	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr8_+_98656336_98656535	0.0332705	NKX1-1	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr10_-_56560939_56560950	0.0328409	NKX1-1	ENST00000373955.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr19_+_41256764_41256825	0.0305675	NKX1-1	ENST00000243563.3|SNRPA|ENSG00000077312.4|small nuclear ribonucleoprotein polypeptide A 	ENST00000601253.1|SNRPA|ENSG00000077312.4|small nuclear ribonucleoprotein polypeptide A 	ENST00000597353.1|SNRPA|ENSG00000077312.4|small nuclear ribonucleoprotein polypeptide A 	ENST00000599362.1|SNRPA|ENSG00000077312.4|small nuclear ribonucleoprotein polypeptide A
hg19_v2_chr1_-_28969517_28969605	0.0300545	NKX1-1	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr10_+_120789223_120789231	0.0297351	NKX1-1	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr10_+_99205894_99205954	0.0270313	NKX1-1	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr17_-_44439084_44439130	0.026936	NKX1-1	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chr10_+_5238793_5238807	0.025277	NKX1-1	ENST00000263126.1|AKR1C4|ENSG00000198610.6|aldo-keto reductase family 1, member C4
hg19_v2_chr10_+_99205959_99205981	0.0246972	NKX1-1	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr12_+_16500599_16500731	0.0233489	NKX1-1	ENST00000535309.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540056.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396209.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540126.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr16_+_640055_640118	0.0217893	NKX1-1	ENST00000568586.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000538492.1|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family 	ENST00000248139.3|RAB40C|ENSG00000197562.5|RAB40C, member RAS oncogene family
hg19_v2_chr17_+_57232690_57232860	0.0217631	NKX1-1	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr12_+_16500037_16500076	0.0199386	NKX1-1	ENST00000536371.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000010404.2|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr12_+_102514019_102514035	0.0182374	NKX1-1	ENST00000537257.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000358383.5|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000392911.2|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr22_+_22730353_22730360	0.0170529	NKX1-1	ENST00000390296.2|IGLV5-45|ENSG00000211650.2|immunoglobulin lambda variable 5-45
hg19_v2_chr16_-_11036300_11036342	0.0166357	NKX1-1	ENST00000331808.4|DEXI|ENSG00000182108.5|Dexi homolog (mouse)
hg19_v2_chr3_+_23851928_23851951	0.0163699	NKX1-1	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chrX_+_72783026_72783049	0.0149204	NKX1-1	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr22_-_39151463_39151639	0.0120088	NKX1-1	ENST00000405510.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000433561.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2
hg19_v2_chr12_-_50790267_50790405	0.0116661	NKX1-1	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr6_-_82957433_82957477	0.011562	NKX1-1	ENST00000306270.7|IBTK|ENSG00000005700.10|inhibitor of Bruton agammaglobulinemia tyrosine kinase
hg19_v2_chr2_-_167232484_167232503	0.0109269	NKX1-1	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr7_-_27239703_27239725	0.0108109	NKX1-1	ENST00000222753.4|HOXA13|ENSG00000106031.6|homeobox A13
hg19_v2_chr9_+_124329336_124329406	0.00876548	NKX1-1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr12_-_91451758_91451763	0.00868732	NKX1-1	ENST00000266719.3|KERA|ENSG00000139330.5|keratocan
hg19_v2_chr5_+_150226085_150226085	0.00706277	NKX1-1	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr4_+_128554081_128554121	0.00453032	NKX1-1	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr16_-_66864806_66864900	0.00433621	NKX1-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr7_-_99717463_99717483	0.00414116	NKX1-1	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr10_+_1095416_1095482	0.00109694	NKX1-1	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr12_+_16500571_16500598	0.000380022	NKX1-1	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
