hg19_v2_chr10_-_49813090_49813198	2.81739	NKX2-3	ENST00000249601.4|ARHGAP22|ENSG00000128805.10|Rho GTPase activating protein 22
hg19_v2_chr1_-_89488510_89488565	2.40971	NKX2-3	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr1_+_65613340_65613370	1.73181	NKX2-3	ENST00000546702.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr14_-_91720224_91720378	1.70838	NKX2-3	ENST00000238699.3|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000531499.2|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr4_-_120550146_120550201	1.5443	NKX2-3	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr19_-_44174330_44174502	1.47451	NKX2-3	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr6_-_11382478_11382592	1.3664	NKX2-3	ENST00000397378.3|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000513989.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000508546.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000504387.1|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr3_-_123512688_123512717	1.31981	NKX2-3	ENST00000475616.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr1_+_65613217_65613331	1.19115	NKX2-3	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr11_+_35211429_35211460	1.16435	NKX2-3	ENST00000525688.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000278385.6|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group) 	ENST00000533222.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr11_+_35211511_35211557	1.09476	NKX2-3	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr16_+_56969284_56969314	1.08019	NKX2-3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr18_-_33702078_33702108	0.936498	NKX2-3	ENST00000586829.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr17_+_26662597_26662628	0.922099	NKX2-3	ENST00000544907.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr17_+_26662730_26662844	0.920801	NKX2-3	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr2_-_239198743_239198784	0.797866	NKX2-3	ENST00000440245.1|PER2|ENSG00000132326.7|period circadian clock 2 	ENST00000431832.1|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr18_-_74839891_74839921	0.792172	NKX2-3	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr3_-_150920979_150921009	0.782391	NKX2-3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr6_+_83072923_83072978	0.744059	NKX2-3	ENST00000535040.1|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr11_+_94277017_94277097	0.715136	NKX2-3	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr11_-_75017734_75017755	0.653443	NKX2-3	ENST00000532525.1|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr2_-_89597542_89597542	0.609565	NKX2-3	ENST00000465170.1|IGKV1-37|ENSG00000239862.1|immunoglobulin kappa variable 1-37 (non-functional)
hg19_v2_chr6_+_69942298_69942394	0.607773	NKX2-3	ENST00000238918.8|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr7_-_80548667_80548688	0.60666	NKX2-3	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr3_+_39093481_39093520	0.579501	NKX2-3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr10_+_101419187_101419313	0.572428	NKX2-3	ENST00000370489.4|ENTPD7|ENSG00000198018.6|ectonucleoside triphosphate diphosphohydrolase 7
hg19_v2_chr1_+_113217043_113217070	0.566992	NKX2-3	ENST00000413052.2|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr2_+_89923550_89923550	0.566487	NKX2-3	ENST00000509129.1|IGKV1D-37|ENSG00000250036.1|immunoglobulin kappa variable 1D-37 (non-functional)
hg19_v2_chr5_-_142814241_142814278	0.561518	NKX2-3	ENST00000504572.1|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr6_-_137539651_137539703	0.555175	NKX2-3	ENST00000543628.1|IFNGR1|ENSG00000027697.8|interferon gamma receptor 1
hg19_v2_chr11_-_57177586_57177586	0.539308	NKX2-3	ENST00000529411.1|RP11-872D17.8|ENSG00000254979.1|Uncharacterized protein
hg19_v2_chr3_+_149191723_149191761	0.539227	NKX2-3	ENST00000305354.4|TM4SF4|ENSG00000169903.6|transmembrane 4 L six family member 4
hg19_v2_chrX_+_41548259_41548320	0.513055	NKX2-3	ENST00000378138.5|GPR34|ENSG00000171659.9|G protein-coupled receptor 34
hg19_v2_chr14_-_72458326_72458326	0.50839	NKX2-3	ENST00000542853.1|AC005477.1|ENSG00000257040.1|AC005477.1
hg19_v2_chr5_+_179105615_179105666	0.502678	NKX2-3	ENST00000514383.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr5_+_169780485_169780498	0.494702	NKX2-3	ENST00000377360.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr2_+_161993465_161993481	0.491416	NKX2-3	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_-_231989808_231989832	0.480796	NKX2-3	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr6_-_32160622_32160719	0.475046	NKX2-3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chr5_+_149569520_149569689	0.470722	NKX2-3	ENST00000230671.2|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7 	ENST00000524041.1|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7
hg19_v2_chr12_-_123187890_123187911	0.468486	NKX2-3	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chrX_+_41548220_41548243	0.463584	NKX2-3	ENST00000378142.4|GPR34|ENSG00000171659.9|G protein-coupled receptor 34
hg19_v2_chr20_-_30539773_30539895	0.45649	NKX2-3	ENST00000202017.4|PDRG1|ENSG00000088356.4|p53 and DNA-damage regulated 1
hg19_v2_chr1_+_113217073_113217127	0.453667	NKX2-3	ENST00000369645.1|MOV10|ENSG00000155363.14|Mov10, Moloney leukemia virus 10, homolog (mouse)
hg19_v2_chr16_+_8736232_8736325	0.449814	NKX2-3	ENST00000562973.1|METTL22|ENSG00000067365.10|methyltransferase like 22
hg19_v2_chr5_+_49961727_49961740	0.445904	NKX2-3	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr1_+_32666188_32666274	0.442882	NKX2-3	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr12_-_52604607_52604639	0.441469	NKX2-3	ENST00000551894.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80 	ENST00000553017.1|C12orf80|ENSG00000257137.1|chromosome 12 open reading frame 80
hg19_v2_chr20_-_43729750_43729774	0.437378	NKX2-3	ENST00000537075.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 	ENST00000306117.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v2_chr19_-_46288917_46288971	0.43652	NKX2-3	ENST00000537879.1|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000596586.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein  	ENST00000595946.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein
hg19_v2_chr6_+_31126291_31126399	0.433044	NKX2-3	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr11_+_57435219_57435368	0.432195	NKX2-3	ENST00000527985.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5 	ENST00000287169.3|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr7_+_141463897_141463897	0.40963	NKX2-3	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr13_-_46756351_46756459	0.406028	NKX2-3	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr2_+_114163945_114163973	0.4009	NKX2-3	ENST00000453673.3|IGKV1OR2-108|ENSG00000231292.5|immunoglobulin kappa variable 1/OR2-108 (non-functional)
hg19_v2_chr4_+_95376396_95376421	0.394952	NKX2-3	ENST00000508216.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5 	ENST00000514743.1|PDLIM5|ENSG00000163110.10|PDZ and LIM domain 5
hg19_v2_chr4_+_81118647_81118666	0.391838	NKX2-3	ENST00000415738.2|PRDM8|ENSG00000152784.11|PR domain containing 8
hg19_v2_chr5_+_150051149_150051323	0.388169	NKX2-3	ENST00000523553.1|MYOZ3|ENSG00000164591.9|myozenin 3
hg19_v2_chr2_+_36923933_36924020	0.381431	NKX2-3	ENST00000497382.1|VIT|ENSG00000205221.8|vitrin 	ENST00000404084.1|VIT|ENSG00000205221.8|vitrin 	ENST00000379241.3|VIT|ENSG00000205221.8|vitrin 	ENST00000401530.1|VIT|ENSG00000205221.8|vitrin
hg19_v2_chr6_+_83073334_83073351	0.372968	NKX2-3	ENST00000369750.3|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr4_-_48082192_48082207	0.371735	NKX2-3	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr10_-_104262426_104262437	0.369561	NKX2-3	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr10_-_36813162_36813162	0.365668	NKX2-3	ENST00000440465.1|NAMPTL|ENSG00000229644.4|nicotinamide phosphoribosyltransferase-like
hg19_v2_chr3_+_30648066_30648167	0.359981	NKX2-3	ENST00000359013.4|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr3_+_38179969_38180192	0.356494	NKX2-3	ENST00000396334.3|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000417037.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000424893.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000495303.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000443433.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000421516.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88
hg19_v2_chr3_-_10452359_10452453	0.351949	NKX2-3	ENST00000452124.1|ATP2B2|ENSG00000157087.12|ATPase, Ca++ transporting, plasma membrane 2
hg19_v2_chr7_+_117251671_117251701	0.350157	NKX2-3	ENST00000468795.1|CFTR|ENSG00000001626.10|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)
hg19_v2_chr20_-_4795747_4795769	0.348825	NKX2-3	ENST00000379376.2|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr3_-_49761337_49761421	0.347605	NKX2-3	ENST00000535833.1|AMIGO3|ENSG00000176020.7|adhesion molecule with Ig-like domain 3 	ENST00000308388.6|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B 	ENST00000480687.1|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B 	ENST00000308375.6|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B
hg19_v2_chr14_+_22386325_22386391	0.338318	NKX2-3	ENST00000390439.2|TRAV13-2|ENSG00000211791.2|T cell receptor alpha variable 13-2
hg19_v2_chr5_-_58335281_58335339	0.332022	NKX2-3	ENST00000358923.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr19_+_33865218_33865254	0.329945	NKX2-3	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
hg19_v2_chr1_-_202129704_202129772	0.328765	NKX2-3	ENST00000476061.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000544762.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000467283.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000464870.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000435759.2|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000486116.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000543735.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000308986.5|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7 	ENST00000477625.1|PTPN7|ENSG00000143851.11|protein tyrosine phosphatase, non-receptor type 7
hg19_v2_chr11_+_6226782_6226796	0.328484	NKX2-3	ENST00000316375.2|C11orf42|ENSG00000180878.2|chromosome 11 open reading frame 42
hg19_v2_chr11_+_33902189_33902189	0.327398	NKX2-3	ENST00000330381.2|AC132216.1|ENSG00000184566.2|HCG1785179; PRO1787; Uncharacterized protein
hg19_v2_chr6_+_36562132_36562154	0.324444	NKX2-3	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr3_+_63428982_63429027	0.320959	NKX2-3	ENST00000479198.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000460711.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000465156.1|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr10_-_104262460_104262489	0.316216	NKX2-3	ENST00000446605.2|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000369905.4|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) 	ENST00000545684.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr22_+_38453207_38453301	0.314964	NKX2-3	ENST00000404072.3|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1 	ENST00000424694.1|PICK1|ENSG00000100151.11|protein interacting with PRKCA 1
hg19_v2_chr1_+_109632425_109632425	0.314748	NKX2-3	ENST00000338272.8|TMEM167B|ENSG00000215717.5|transmembrane protein 167B
hg19_v2_chr19_-_45579762_45579846	0.312928	NKX2-3	ENST00000303809.2|ZNF296|ENSG00000170684.4|zinc finger protein 296
hg19_v2_chr17_-_41132410_41132545	0.311933	NKX2-3	ENST00000409446.3|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like 	ENST00000409399.1|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000421990.2|PTGES3L-AARSD1|ENSG00000108825.13|PTGES3L-AARSD1 readthrough 	ENST00000453594.1|PTGES3L|ENSG00000267060.1|prostaglandin E synthase 3 (cytosolic)-like
hg19_v2_chr4_+_146403912_146403972	0.303896	NKX2-3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr17_-_29641084_29641103	0.299811	NKX2-3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr3_-_122233723_122233797	0.298983	NKX2-3	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr17_+_41132564_41132600	0.292939	NKX2-3	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr5_+_150404904_150404928	0.291453	NKX2-3	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr17_-_26662440_26662463	0.290907	NKX2-3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr19_-_50979981_50980050	0.287452	NKX2-3	ENST00000595790.1|FAM71E1|ENSG00000142530.6|family with sequence similarity 71, member E1 	ENST00000600100.1|FAM71E1|ENSG00000142530.6|family with sequence similarity 71, member E1
hg19_v2_chr7_+_134430212_134430237	0.285649	NKX2-3	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr19_-_49955050_49955095	0.285065	NKX2-3	ENST00000262265.5|PIH1D1|ENSG00000104872.6|PIH1 domain containing 1
hg19_v2_chr3_-_122134882_122134951	0.284934	NKX2-3	ENST00000330689.4|WDR5B|ENSG00000196981.2|WD repeat domain 5B
hg19_v2_chr15_-_101142401_101142445	0.283008	NKX2-3	ENST00000314742.8|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr1_+_47137544_47137550	0.279875	NKX2-3	ENST00000564373.1|TEX38|ENSG00000186118.7|testis expressed 38
hg19_v2_chr19_+_56187987_56188005	0.27685	NKX2-3	ENST00000411543.2|EPN1|ENSG00000063245.10|epsin 1
hg19_v2_chr1_+_230883128_230883162	0.27647	NKX2-3	ENST00000271971.2|CAPN9|ENSG00000135773.8|calpain 9 	ENST00000354537.1|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr6_+_46761118_46761132	0.276401	NKX2-3	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr17_+_12569306_12569344	0.274421	NKX2-3	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr6_-_43027105_43027183	0.272158	NKX2-3	ENST00000230413.5|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000487429.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000489623.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2 	ENST00000468957.1|MRPL2|ENSG00000112651.7|mitochondrial ribosomal protein L2
hg19_v2_chr12_-_123201337_123201439	0.269901	NKX2-3	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr20_-_23969416_23969416	0.265684	NKX2-3	ENST00000335694.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1
hg19_v2_chr17_-_26662464_26662519	0.265671	NKX2-3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr12_+_49761147_49761167	0.264473	NKX2-3	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr1_-_114696472_114696541	0.262493	NKX2-3	ENST00000393296.1|SYT6|ENSG00000134207.10|synaptotagmin VI 	ENST00000369547.1|SYT6|ENSG00000134207.10|synaptotagmin VI 	ENST00000610222.1|SYT6|ENSG00000134207.10|synaptotagmin VI
hg19_v2_chr2_-_492655_492663	0.262324	NKX2-3	ENST00000427398.1|AC093326.1|ENSG00000223985.1|AC093326.1
hg19_v2_chr1_+_43824669_43824684	0.261854	NKX2-3	ENST00000372462.1|CDC20|ENSG00000117399.9|cell division cycle 20
hg19_v2_chr18_+_32173276_32173349	0.261358	NKX2-3	ENST00000591816.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588125.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000598334.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588684.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000554864.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399121.5|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000595022.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000269190.7|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399097.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr3_-_47950745_47950757	0.261067	NKX2-3	ENST00000429422.1|MAP4|ENSG00000047849.17|microtubule-associated protein 4
hg19_v2_chr22_+_39101728_39101763	0.257852	NKX2-3	ENST00000216044.5|GTPBP1|ENSG00000100226.11|GTP binding protein 1 	ENST00000484657.1|GTPBP1|ENSG00000100226.11|GTP binding protein 1
hg19_v2_chr12_+_49761224_49761259	0.254684	NKX2-3	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr5_-_59481406_59481425	0.250641	NKX2-3	ENST00000546160.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr5_+_156693091_156693150	0.248423	NKX2-3	ENST00000318218.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000442283.2|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000522463.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000521420.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr9_+_135906076_135906135	0.247651	NKX2-3	ENST00000372097.5|GTF3C5|ENSG00000148308.13|general transcription factor IIIC, polypeptide 5, 63kDa 	ENST00000440319.1|GTF3C5|ENSG00000148308.13|general transcription factor IIIC, polypeptide 5, 63kDa
hg19_v2_chr2_+_102803433_102803511	0.247644	NKX2-3	ENST00000264257.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2 	ENST00000441515.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2
hg19_v2_chr10_+_99332198_99332281	0.243267	NKX2-3	ENST00000307518.5|ANKRD2|ENSG00000165887.7|ankyrin repeat domain 2 (stretch responsive muscle) 	ENST00000298808.5|ANKRD2|ENSG00000165887.7|ankyrin repeat domain 2 (stretch responsive muscle) 	ENST00000370655.1|ANKRD2|ENSG00000165887.7|ankyrin repeat domain 2 (stretch responsive muscle)
hg19_v2_chr14_+_21387508_21387523	0.238378	NKX2-3	ENST00000555624.1|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr3_+_182971018_182971059	0.238103	NKX2-3	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr8_-_93029520_93029591	0.237864	NKX2-3	ENST00000521553.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr15_-_99791413_99791437	0.237042	NKX2-3	ENST00000394129.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558663.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394135.3|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000561365.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560279.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr4_+_48343339_48343414	0.236658	NKX2-3	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr17_-_34808047_34808104	0.235598	NKX2-3	ENST00000592614.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000591542.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000400684.4|TBC1D3H|ENSG00000242384.3|TBC1 domain family, member 3H 	ENST00000330458.7|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000341264.6|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G 	ENST00000592987.1|TBC1D3G|ENSG00000161583.12|TBC1 domain family, member 3G
hg19_v2_chr8_+_11961898_11961898	0.234291	NKX2-3	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chr3_+_30647994_30648010	0.229941	NKX2-3	ENST00000295754.5|TGFBR2|ENSG00000163513.13|transforming growth factor, beta receptor II (70/80kDa)
hg19_v2_chr7_-_2883928_2883993	0.229272	NKX2-3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr5_-_115177247_115177279	0.223884	NKX2-3	ENST00000500945.2|ATG12|ENSG00000145782.8|autophagy related 12
hg19_v2_chr2_+_204103663_204103730	0.219617	NKX2-3	ENST00000356079.4|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1 	ENST00000429815.2|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr18_-_67624160_67624238	0.217389	NKX2-3	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr2_+_219110149_219110226	0.21646	NKX2-3	ENST00000456575.1|ARPC2|ENSG00000163466.11|actin related protein 2/3 complex, subunit 2, 34kDa
hg19_v2_chr4_-_36246060_36246167	0.21599	NKX2-3	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr11_-_62607036_62607133	0.215951	NKX2-3	ENST00000311713.7|WDR74|ENSG00000133316.11|WD repeat domain 74 	ENST00000278856.4|WDR74|ENSG00000133316.11|WD repeat domain 74
hg19_v2_chr10_-_76868931_76868980	0.215925	NKX2-3	ENST00000372700.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000473072.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000491677.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000607131.1|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000372702.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13
hg19_v2_chr5_-_148033726_148033741	0.215383	NKX2-3	ENST00000354217.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000314512.6|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000362016.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr1_+_47137445_47137533	0.215018	NKX2-3	ENST00000569393.1|TEX38|ENSG00000186118.7|testis expressed 38 	ENST00000334122.4|TEX38|ENSG00000186118.7|testis expressed 38 	ENST00000415500.1|TEX38|ENSG00000186118.7|testis expressed 38
hg19_v2_chr8_+_24298597_24298612	0.214381	NKX2-3	ENST00000380789.1|ADAM7|ENSG00000069206.11|ADAM metallopeptidase domain 7
hg19_v2_chr4_+_88754069_88754112	0.213144	NKX2-3	ENST00000395102.4|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000497649.2|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr14_+_45366518_45366552	0.209609	NKX2-3	ENST00000557112.1|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr11_+_124735282_124735332	0.208819	NKX2-3	ENST00000397801.1|ROBO3|ENSG00000154134.10|roundabout, axon guidance receptor, homolog 3 (Drosophila)
hg19_v2_chr5_-_141338627_141338627	0.208172	NKX2-3	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr13_+_75126978_75126988	0.207858	NKX2-3	ENST00000596240.1|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347 	ENST00000451336.2|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347
hg19_v2_chr2_+_161993412_161993453	0.207321	NKX2-3	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr9_+_131447342_131447362	0.20524	NKX2-3	ENST00000409104.3|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr10_+_27793197_27793247	0.195479	NKX2-3	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr4_-_141677267_141677291	0.194695	NKX2-3	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr10_-_13523073_13523073	0.194614	NKX2-3	ENST00000440282.1|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr3_-_52002403_52002433	0.192928	NKX2-3	ENST00000490063.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000468324.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000497653.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000484633.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4
hg19_v2_chr16_-_31076332_31076409	0.191395	NKX2-3	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr1_-_151804314_151804348	0.189205	NKX2-3	ENST00000318247.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr1_+_202317815_202317854	0.189064	NKX2-3	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr19_-_39368887_39368935	0.188398	NKX2-3	ENST00000340740.3|RINL|ENSG00000187994.9|Ras and Rab interactor-like 	ENST00000591812.1|RINL|ENSG00000187994.9|Ras and Rab interactor-like
hg19_v2_chr17_+_36283971_36284016	0.186914	NKX2-3	ENST00000327454.6|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F 	ENST00000378174.5|TBC1D3F|ENSG00000185128.11|TBC1 domain family, member 3F
hg19_v2_chr1_-_205391178_205391214	0.186535	NKX2-3	ENST00000367153.4|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367151.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000391936.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367149.3|LEMD1|ENSG00000186007.5|LEM domain containing 1
hg19_v2_chr8_+_24298531_24298551	0.186171	NKX2-3	ENST00000175238.6|ADAM7|ENSG00000069206.11|ADAM metallopeptidase domain 7
hg19_v2_chr1_-_26633067_26633145	0.185809	NKX2-3	ENST00000421827.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374215.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374223.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000357089.4|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000535108.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000314675.7|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000436301.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000423664.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374221.3|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chr10_+_17794251_17794260	0.185451	NKX2-3	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr4_-_100212132_100212185	0.183846	NKX2-3	ENST00000209668.2|ADH1A|ENSG00000187758.3|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v2_chr16_-_31076273_31076290	0.183605	NKX2-3	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr1_+_46806837_46806885	0.182857	NKX2-3	ENST00000537428.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr21_+_33671160_33671172	0.181854	NKX2-3	ENST00000303645.5|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr10_+_99332529_99332543	0.181771	NKX2-3	ENST00000455090.1|ANKRD2|ENSG00000165887.7|ankyrin repeat domain 2 (stretch responsive muscle)
hg19_v2_chr12_-_120315074_120315097	0.179836	NKX2-3	ENST00000261833.7|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21) 	ENST00000392521.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chr9_-_138391692_138391741	0.179732	NKX2-3	ENST00000429260.2|C9orf116|ENSG00000160345.8|chromosome 9 open reading frame 116
hg19_v2_chr3_-_167191814_167191842	0.179075	NKX2-3	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr16_-_3450963_3451065	0.178543	NKX2-3	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chr14_+_94547675_94547742	0.178324	NKX2-3	ENST00000393115.3|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554166.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000556381.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000553664.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000555341.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557218.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000554544.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1 	ENST00000557066.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr4_+_88754113_88754139	0.177898	NKX2-3	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr17_-_36348610_36348666	0.177622	NKX2-3	ENST00000339023.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3 	ENST00000354664.4|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3
hg19_v2_chr6_+_131148538_131148554	0.177606	NKX2-3	ENST00000541421.2|SMLR1|ENSG00000256162.2|small leucine-rich protein 1
hg19_v2_chr12_+_6309963_6310022	0.176587	NKX2-3	ENST00000382515.2|CD9|ENSG00000010278.7|CD9 molecule
hg19_v2_chr2_-_95787738_95787763	0.174739	NKX2-3	ENST00000272418.2|MRPS5|ENSG00000144029.7|mitochondrial ribosomal protein S5
hg19_v2_chr1_+_110091189_110091268	0.174638	NKX2-3	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr19_+_42746927_42746927	0.17426	NKX2-3	ENST00000378108.1|AC006486.1|ENSG00000204957.1|AC006486.1
hg19_v2_chr8_-_20040601_20040630	0.173287	NKX2-3	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr13_-_44735393_44735393	0.172472	NKX2-3	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr5_-_96518907_96518997	0.171378	NKX2-3	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr19_+_39616410_39616474	0.166444	NKX2-3	ENST00000602004.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599470.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000321944.4|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593480.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000358301.3|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000593690.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4 	ENST00000599386.1|PAK4|ENSG00000130669.13|p21 protein (Cdc42/Rac)-activated kinase 4
hg19_v2_chr5_-_148033693_148033716	0.166193	NKX2-3	ENST00000377888.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000360693.3|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr10_-_112678692_112678695	0.166088	NKX2-3	ENST00000605742.1|BBIP1|ENSG00000214413.3|BBSome interacting protein 1
hg19_v2_chr22_+_38004473_38004508	0.164787	NKX2-3	ENST00000414350.3|GGA1|ENSG00000100083.14|golgi-associated, gamma adaptin ear containing, ARF binding protein 1 	ENST00000343632.4|GGA1|ENSG00000100083.14|golgi-associated, gamma adaptin ear containing, ARF binding protein 1
hg19_v2_chr16_-_58663720_58663790	0.163964	NKX2-3	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr4_-_46911223_46911230	0.163874	NKX2-3	ENST00000396533.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr4_-_57524061_57524074	0.161405	NKX2-3	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr11_+_10326612_10326635	0.159462	NKX2-3	ENST00000534464.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000530439.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000524948.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000528655.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000526492.1|ADM|ENSG00000148926.5|adrenomedullin 	ENST00000525063.1|ADM|ENSG00000148926.5|adrenomedullin
hg19_v2_chr11_+_120195992_120196023	0.158737	NKX2-3	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr9_-_25678856_25678856	0.158256	NKX2-3	ENST00000358022.3|TUSC1|ENSG00000198680.3|tumor suppressor candidate 1
hg19_v2_chr8_-_20040638_20040717	0.157811	NKX2-3	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr1_-_240906911_240906933	0.155347	NKX2-3	ENST00000431139.2|RP11-80B9.4|ENSG00000230015.2|RP11-80B9.4
hg19_v2_chr8_+_117963190_117963224	0.151857	NKX2-3	ENST00000427715.2|SLC30A8|ENSG00000164756.8|solute carrier family 30 (zinc transporter), member 8
hg19_v2_chr9_+_125376948_125376948	0.151377	NKX2-3	ENST00000297913.2|OR1Q1|ENSG00000165202.2|olfactory receptor, family 1, subfamily Q, member 1
hg19_v2_chr15_-_78369994_78370069	0.150586	NKX2-3	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chrX_-_108868390_108868407	0.150498	NKX2-3	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr6_+_131958436_131958525	0.149415	NKX2-3	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr1_-_68962805_68962904	0.149236	NKX2-3	ENST00000370966.5|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr4_-_46911248_46911270	0.149067	NKX2-3	ENST00000355591.3|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2 	ENST00000505102.1|COX7B2|ENSG00000170516.12|cytochrome c oxidase subunit VIIb2
hg19_v2_chr12_-_50290839_50290873	0.148887	NKX2-3	ENST00000552863.1|FAIM2|ENSG00000135472.4|Fas apoptotic inhibitory molecule 2
hg19_v2_chr19_-_3478477_3478500	0.148382	NKX2-3	ENST00000591708.1|C19orf77|ENSG00000095932.5|chromosome 19 open reading frame 77
hg19_v2_chr18_+_22040593_22040616	0.148192	NKX2-3	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr14_+_21387491_21387506	0.147461	NKX2-3	ENST00000258817.2|RP11-84C10.2|ENSG00000136315.3|RP11-84C10.2
hg19_v2_chr8_-_74791051_74791145	0.14389	NKX2-3	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr17_+_29248698_29248747	0.141781	NKX2-3	ENST00000330889.3|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr14_+_21423611_21423665	0.140257	NKX2-3	ENST00000304625.2|RNASE2|ENSG00000169385.2|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)
hg19_v2_chr1_+_230883179_230883196	0.139301	NKX2-3	ENST00000366666.2|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr20_+_56964253_56964369	0.13774	NKX2-3	ENST00000395802.3|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chrX_+_71353499_71353499	0.133652	NKX2-3	ENST00000373677.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr10_+_135207623_135207679	0.132658	NKX2-3	ENST00000317502.6|MTG1|ENSG00000148824.14|mitochondrial ribosome-associated GTPase 1 	ENST00000432508.3|MTG1|ENSG00000148824.14|mitochondrial ribosome-associated GTPase 1
hg19_v2_chr6_-_26216872_26216895	0.132306	NKX2-3	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chrX_+_71354000_71354000	0.132216	NKX2-3	ENST00000510661.1|NHSL2|ENSG00000204131.6|NHS-like 2 	ENST00000535692.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr1_+_202431859_202431871	0.132055	NKX2-3	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr10_+_122357721_122357721	0.128007	NKX2-3	ENST00000369071.2|C10orf85|ENSG00000177234.5|chromosome 10 open reading frame 85
hg19_v2_chr18_-_51750948_51751059	0.127149	NKX2-3	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr2_+_132044330_132044330	0.126664	NKX2-3	ENST00000416266.1|CYP4F31P|ENSG00000178206.3|cytochrome P450, family 4, subfamily F, polypeptide 31, pseudogene
hg19_v2_chr10_+_135207598_135207618	0.126069	NKX2-3	ENST00000477902.2|MTG1|ENSG00000148824.14|mitochondrial ribosome-associated GTPase 1
hg19_v2_chr1_+_168195229_168195294	0.125325	NKX2-3	ENST00000271375.4|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2 	ENST00000367825.3|SFT2D2|ENSG00000213064.5|SFT2 domain containing 2
hg19_v2_chr21_+_33671264_33671283	0.122812	NKX2-3	ENST00000339944.4|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr12_+_12966250_12966302	0.12279	NKX2-3	ENST00000352940.4|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000358007.3|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000544400.1|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
hg19_v2_chr14_-_69263043_69263190	0.122426	NKX2-3	ENST00000408913.2|ZFP36L1|ENSG00000185650.8|ZFP36 ring finger protein-like 1
hg19_v2_chr3_+_35721182_35721277	0.121488	NKX2-3	ENST00000413378.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa 	ENST00000417925.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr3_-_101039402_101039429	0.121445	NKX2-3	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr1_-_216896780_216896800	0.120625	NKX2-3	ENST00000459955.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000366937.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000408911.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000391890.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr1_+_207070775_207070797	0.119725	NKX2-3	ENST00000391929.3|IL24|ENSG00000162892.11|interleukin 24 	ENST00000294984.2|IL24|ENSG00000162892.11|interleukin 24 	ENST00000367093.3|IL24|ENSG00000162892.11|interleukin 24
hg19_v2_chrX_+_37865804_37865842	0.11875	NKX2-3	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr1_-_162381907_162381939	0.118606	NKX2-3	ENST00000367929.2|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B 	ENST00000359567.3|SH2D1B|ENSG00000198574.4|SH2 domain containing 1B
hg19_v2_chr4_+_76439665_76439730	0.117319	NKX2-3	ENST00000508105.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000311638.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000380837.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507556.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000504190.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507885.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000502620.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000514480.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr12_+_71833550_71833588	0.116234	NKX2-3	ENST00000266674.5|LGR5|ENSG00000139292.8|leucine-rich repeat containing G protein-coupled receptor 5
hg19_v2_chr5_+_112312399_112312414	0.113835	NKX2-3	ENST00000515408.1|DCP2|ENSG00000172795.11|decapping mRNA 2 	ENST00000513585.1|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr17_-_29641104_29641130	0.113696	NKX2-3	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr18_-_70532906_70532934	0.113055	NKX2-3	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr21_-_46131470_46131495	0.109958	NKX2-3	ENST00000323084.4|TSPEAR|ENSG00000175894.10|thrombospondin-type laminin G domain and EAR repeats
hg19_v2_chr1_+_43803475_43803520	0.109869	NKX2-3	ENST00000372470.3|MPL|ENSG00000117400.10|myeloproliferative leukemia virus oncogene 	ENST00000413998.2|MPL|ENSG00000117400.10|myeloproliferative leukemia virus oncogene
hg19_v2_chr10_+_124670121_124670217	0.109516	NKX2-3	ENST00000368894.1|FAM24A|ENSG00000203795.2|family with sequence similarity 24, member A
hg19_v2_chrX_+_47420516_47420621	0.108818	NKX2-3	ENST00000377045.4|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000290277.6|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog 	ENST00000377039.2|ARAF|ENSG00000078061.8|v-raf murine sarcoma 3611 viral oncogene homolog
hg19_v2_chr1_-_29508499_29508524	0.10878	NKX2-3	ENST00000373795.4|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr16_+_2255841_2255891	0.108549	NKX2-3	ENST00000301725.7|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr12_-_120632505_120632533	0.107325	NKX2-3	ENST00000300648.6|GCN1L1|ENSG00000089154.6|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
hg19_v2_chr11_+_65627865_65627958	0.107235	NKX2-3	ENST00000308110.4|MUS81|ENSG00000172732.7|MUS81 structure-specific endonuclease subunit
hg19_v2_chr6_+_134758827_134758863	0.105328	NKX2-3	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr10_+_16478942_16478983	0.105279	NKX2-3	ENST00000535784.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000423462.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000378000.1|PTER|ENSG00000165983.10|phosphotriesterase related
hg19_v2_chr9_+_71819927_71820053	0.103435	NKX2-3	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr14_+_94547628_94547661	0.103109	NKX2-3	ENST00000555523.1|IFI27L1|ENSG00000165948.6|interferon, alpha-inducible protein 27-like 1
hg19_v2_chr9_+_71820057_71820078	0.103055	NKX2-3	ENST00000539225.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr11_+_118889456_118889507	0.102473	NKX2-3	ENST00000528230.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000525303.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000434101.2|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000359005.4|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000533058.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chrX_-_25034065_25034088	0.100521	NKX2-3	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr15_+_33022885_33022907	0.0996628	NKX2-3	ENST00000322805.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr6_+_168399772_168399772	0.0986357	NKX2-3	ENST00000443060.2|KIF25|ENSG00000125337.12|kinesin family member 25
hg19_v2_chr19_-_42746714_42746796	0.0979708	NKX2-3	ENST00000222330.3|GSK3A|ENSG00000105723.7|glycogen synthase kinase 3 alpha
hg19_v2_chr18_-_64271363_64271390	0.0975566	NKX2-3	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr1_+_31971828_31971841	0.0974838	NKX2-3	ENST00000418618.1|RP11-439L8.3|ENSG00000228682.2|RP11-439L8.3
hg19_v2_chr6_+_42123141_42123279	0.0954916	NKX2-3	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr10_-_73976884_73976894	0.0953497	NKX2-3	ENST00000317126.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000545550.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr7_-_86849883_86849910	0.0928307	NKX2-3	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr12_-_108714412_108714446	0.0918832	NKX2-3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chr22_+_32439019_32439044	0.0909585	NKX2-3	ENST00000266088.4|SLC5A1|ENSG00000100170.5|solute carrier family 5 (sodium/glucose cotransporter), member 1
hg19_v2_chr16_-_32688053_32688053	0.0893707	NKX2-3	ENST00000398682.4|TP53TG3|ENSG00000183632.10|TP53 target 3
hg19_v2_chr14_-_30766223_30766249	0.0890731	NKX2-3	ENST00000549360.1|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1	ENST00000508469.2|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1
hg19_v2_chr16_+_2255710_2255789	0.0890189	NKX2-3	ENST00000397124.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae) 	ENST00000565250.1|MLST8|ENSG00000167965.13|MTOR associated protein, LST8 homolog (S. cerevisiae)
hg19_v2_chr2_+_90458201_90458201	0.0856329	NKX2-3	ENST00000603238.1|CH17-132F21.1|ENSG00000270999.1|Uncharacterized protein
hg19_v2_chr2_-_31440377_31440411	0.0844251	NKX2-3	ENST00000444918.2|CAPN14|ENSG00000214711.5|calpain 14 	ENST00000403897.3|CAPN14|ENSG00000214711.5|calpain 14
hg19_v2_chr19_-_39881669_39881773	0.0809203	NKX2-3	ENST00000221266.7|PAF1|ENSG00000006712.10|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
hg19_v2_chr5_-_39270725_39270771	0.0806547	NKX2-3	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr2_-_24270217_24270232	0.0801051	NKX2-3	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr11_-_14521379_14521573	0.080071	NKX2-3	ENST00000249923.3|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000529866.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000439561.2|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000534771.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr12_-_122712038_122712081	0.0795231	NKX2-3	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr2_+_113825547_113825547	0.0791042	NKX2-3	ENST00000341010.2|IL1F10|ENSG00000136697.8|interleukin 1 family, member 10 (theta) 	ENST00000337569.3|IL1F10|ENSG00000136697.8|interleukin 1 family, member 10 (theta)
hg19_v2_chr16_+_32264040_32264040	0.0774115	NKX2-3	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr10_+_18041218_18041227	0.0768227	NKX2-3	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr1_-_152086556_152086556	0.0755537	NKX2-3	ENST00000368804.1|TCHH|ENSG00000159450.8|trichohyalin
hg19_v2_chr14_+_102276192_102276208	0.0745678	NKX2-3	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr1_-_33116128_33116185	0.0743388	NKX2-3	ENST00000436661.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000373501.2|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000341885.5|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000468695.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand
hg19_v2_chr12_+_49761273_49761330	0.0743381	NKX2-3	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr17_-_8055747_8055758	0.0741728	NKX2-3	ENST00000317276.4|PER1|ENSG00000179094.9|period circadian clock 1 	ENST00000581703.1|PER1|ENSG00000179094.9|period circadian clock 1
hg19_v2_chr1_+_38273419_38273433	0.0735322	NKX2-3	ENST00000468084.1|C1orf122|ENSG00000197982.12|chromosome 1 open reading frame 122
hg19_v2_chr4_+_102734967_102735022	0.0728621	NKX2-3	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr8_+_92261516_92261555	0.0727539	NKX2-3	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr14_-_95624227_95624347	0.0721947	NKX2-3	ENST00000526495.1|DICER1|ENSG00000100697.10|dicer 1, ribonuclease type III
hg19_v2_chr13_-_46679185_46679211	0.0720281	NKX2-3	ENST00000439329.3|CPB2|ENSG00000080618.9|carboxypeptidase B2 (plasma)
hg19_v2_chr14_+_39703112_39703135	0.0710549	NKX2-3	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr12_+_82347498_82347593	0.0706784	NKX2-3	ENST00000550506.1|RP11-362A1.1|ENSG00000257747.1|RP11-362A1.1
hg19_v2_chr18_+_22040620_22040693	0.0701517	NKX2-3	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr3_-_131753830_131753844	0.0698109	NKX2-3	ENST00000429747.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chrX_+_78003204_78003248	0.0696384	NKX2-3	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr20_+_56964169_56964182	0.0691268	NKX2-3	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr2_+_173420697_173420873	0.0688969	NKX2-3	ENST00000282077.3|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000392571.2|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000410055.1|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1
hg19_v2_chr5_+_162930114_162930125	0.0688809	NKX2-3	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr4_-_100242549_100242564	0.0688173	NKX2-3	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr5_-_83680603_83680617	0.0679624	NKX2-3	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr1_-_200379104_200379128	0.0671355	NKX2-3	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr18_-_64271316_64271334	0.0661151	NKX2-3	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr8_-_101718991_101719023	0.0654634	NKX2-3	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr1_+_15943995_15944014	0.065218	NKX2-3	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr13_-_46679144_46679183	0.0645958	NKX2-3	ENST00000181383.4|CPB2|ENSG00000080618.9|carboxypeptidase B2 (plasma)
hg19_v2_chr1_+_202317855_202317864	0.0630849	NKX2-3	ENST00000356764.2|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr20_-_1317555_1317555	0.0630821	NKX2-3	ENST00000537552.1|AL136531.1|ENSG00000203630.3|HCG2043693; Uncharacterized protein
hg19_v2_chr11_+_93063137_93063168	0.0619187	NKX2-3	ENST00000534747.1|CCDC67|ENSG00000165325.9|coiled-coil domain containing 67
hg19_v2_chr19_-_474880_474983	0.0618465	NKX2-3	ENST00000382696.3|ODF3L2|ENSG00000181781.5|outer dense fiber of sperm tails 3-like 2 	ENST00000315489.4|ODF3L2|ENSG00000181781.5|outer dense fiber of sperm tails 3-like 2
hg19_v2_chr19_+_15838834_15838834	0.0613565	NKX2-3	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr13_+_23993097_23993110	0.0610699	NKX2-3	ENST00000443092.1|SACS-AS1|ENSG00000229558.1|SACS antisense RNA 1
hg19_v2_chr4_+_78432907_78432907	0.0608938	NKX2-3	ENST00000286758.4|CXCL13|ENSG00000156234.7|chemokine (C-X-C motif) ligand 13
hg19_v2_chr7_-_76829125_76829143	0.0605524	NKX2-3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr1_-_29508321_29508444	0.0603139	NKX2-3	ENST00000546138.1|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr3_+_183967409_183967497	0.0599941	NKX2-3	ENST00000324557.4|ECE2|ENSG00000145194.13|endothelin converting enzyme 2 	ENST00000402825.3|ECE2|ENSG00000145194.13|endothelin converting enzyme 2
hg19_v2_chr5_-_83680192_83680209	0.0582801	NKX2-3	ENST00000380138.3|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr6_-_116833500_116833511	0.058258	NKX2-3	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr3_+_186358200_186358248	0.0582168	NKX2-3	ENST00000382136.3|FETUB|ENSG00000090512.7|fetuin B
hg19_v2_chr14_-_60636561_60636597	0.0571532	NKX2-3	ENST00000536410.2|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000216500.5|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr9_+_116263778_116263793	0.0566241	NKX2-3	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr3_+_25831567_25831602	0.0564933	NKX2-3	ENST00000280701.3|OXSM|ENSG00000151093.3|3-oxoacyl-ACP synthase, mitochondrial 	ENST00000420173.2|OXSM|ENSG00000151093.3|3-oxoacyl-ACP synthase, mitochondrial
hg19_v2_chr3_+_23851928_23851951	0.0551358	NKX2-3	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr8_+_28196157_28196204	0.0543517	NKX2-3	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr6_-_10435032_10435107	0.0541208	NKX2-3	ENST00000491317.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000496285.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000479822.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000487130.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518
hg19_v2_chr1_+_225140372_225140418	0.0537844	NKX2-3	ENST00000366848.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000439375.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr5_-_132200477_132200477	0.0535451	NKX2-3	ENST00000296875.2|GDF9|ENSG00000164404.4|growth differentiation factor 9
hg19_v2_chr6_-_46048116_46048132	0.05344	NKX2-3	ENST00000185206.6|CLIC5|ENSG00000112782.11|chloride intracellular channel 5
hg19_v2_chr17_-_2966901_2966901	0.0508189	NKX2-3	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr16_+_78133293_78133341	0.0503362	NKX2-3	ENST00000566780.1|WWOX|ENSG00000186153.12|WW domain containing oxidoreductase
hg19_v2_chr3_+_108541545_108541569	0.0503209	NKX2-3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr12_+_10460417_10460485	0.0496462	NKX2-3	ENST00000381908.3|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000336164.4|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000350274.5|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr11_-_27384737_27384801	0.0474478	NKX2-3	ENST00000317945.6|CCDC34|ENSG00000109881.12|coiled-coil domain containing 34
hg19_v2_chr3_+_108541608_108541624	0.0470373	NKX2-3	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr1_-_19746236_19746261	0.0461454	NKX2-3	ENST00000375144.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr4_-_84035868_84035897	0.0453602	NKX2-3	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr5_-_134783038_134783038	0.0441712	NKX2-3	ENST00000503143.2|C5orf20|ENSG00000251380.2|chromosome 5 open reading frame 20
hg19_v2_chr12_-_122018859_122018941	0.0432764	NKX2-3	ENST00000536437.1|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000377071.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B 	ENST00000538046.2|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chr9_-_86593238_86593367	0.0432035	NKX2-3	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr16_-_11363178_11363189	0.0431314	NKX2-3	ENST00000312693.3|TNP2|ENSG00000178279.3|transition protein 2 (during histone to protamine replacement)
hg19_v2_chr1_-_2343951_2344018	0.0425561	NKX2-3	ENST00000288774.3|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000507596.1|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000447513.2|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10
hg19_v2_chr2_+_191002486_191002512	0.0425285	NKX2-3	ENST00000396974.2|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr14_+_22580233_22580313	0.0421493	NKX2-3	ENST00000390454.2|TRAV25|ENSG00000211806.2|T cell receptor alpha variable 25
hg19_v2_chr15_+_40674963_40675037	0.0420169	NKX2-3	ENST00000448395.2|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein
hg19_v2_chr5_-_180688105_180688162	0.0418054	NKX2-3	ENST00000327767.4|TRIM52|ENSG00000183718.4|tripartite motif containing 52
hg19_v2_chr12_+_10124001_10124034	0.0415852	NKX2-3	ENST00000396507.3|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000304361.4|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A 	ENST00000434319.2|CLEC12A|ENSG00000172322.9|C-type lectin domain family 12, member A
hg19_v2_chr20_+_32782375_32782385	0.0410555	NKX2-3	ENST00000568305.1|ASIP|ENSG00000101440.5|agouti signaling protein
hg19_v2_chr1_-_155990580_155990750	0.0410198	NKX2-3	ENST00000531917.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000480567.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000526212.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000529008.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000496742.1|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta) 	ENST00000295702.4|SSR2|ENSG00000163479.9|signal sequence receptor, beta (translocon-associated protein beta)
hg19_v2_chr12_+_123464607_123464873	0.0409846	NKX2-3	ENST00000543566.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000315580.5|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000542099.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000392435.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000413381.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000426960.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000453766.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr11_+_118889142_118889232	0.0398075	NKX2-3	ENST00000533632.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr6_-_32634425_32634479	0.0396287	NKX2-3	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr2_-_38303218_38303323	0.0387227	NKX2-3	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr15_-_101142362_101142395	0.0380057	NKX2-3	ENST00000559577.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000561308.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560133.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560941.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000559736.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560272.1|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr14_-_94547541_94547591	0.0375428	NKX2-3	ENST00000544005.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000555054.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000330836.5|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24
hg19_v2_chr22_+_25202232_25202286	0.0373726	NKX2-3	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr4_-_39034542_39034578	0.0368571	NKX2-3	ENST00000344606.6|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chrX_-_14891150_14891201	0.0365146	NKX2-3	ENST00000452869.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000398334.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000324138.3|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B
hg19_v2_chr19_-_10341948_10341965	0.0363472	NKX2-3	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr15_-_56757329_56757342	0.0361329	NKX2-3	ENST00000260453.3|MNS1|ENSG00000138587.5|meiosis-specific nuclear structural 1
hg19_v2_chr19_+_53761545_53761545	0.0358195	NKX2-3	ENST00000341702.3|VN1R2|ENSG00000196131.6|vomeronasal 1 receptor 2
hg19_v2_chr6_-_33285505_33285529	0.0354809	NKX2-3	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr1_-_240775447_240775462	0.0339228	NKX2-3	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr16_-_52119019_52119021	0.0334453	NKX2-3	ENST00000561513.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919 	ENST00000565742.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919
hg19_v2_chr1_+_152943122_152943142	0.0334379	NKX2-3	ENST00000328051.2|SPRR4|ENSG00000184148.3|small proline-rich protein 4
hg19_v2_chr13_+_31506818_31506853	0.0333297	NKX2-3	ENST00000380473.3|TEX26|ENSG00000175664.5|testis expressed 26
hg19_v2_chr11_+_12399071_12399185	0.0326092	NKX2-3	ENST00000539723.1|PARVA|ENSG00000197702.7|parvin, alpha 	ENST00000550549.1|PARVA|ENSG00000197702.7|parvin, alpha
hg19_v2_chr14_+_39703084_39703110	0.0304196	NKX2-3	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr2_+_191045173_191045266	0.030106	NKX2-3	ENST00000409870.1|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr12_+_123465033_123465075	0.0300855	NKX2-3	ENST00000454885.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr11_-_65488260_65488418	0.0280471	NKX2-3	ENST00000527610.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000528220.1|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C 	ENST00000308418.4|RNASEH2C|ENSG00000172922.4|ribonuclease H2, subunit C
hg19_v2_chr1_-_197036364_197036401	0.0272322	NKX2-3	ENST00000367412.1|F13B|ENSG00000143278.3|coagulation factor XIII, B polypeptide
hg19_v2_chr20_+_57427765_57427783	0.0266967	NKX2-3	ENST00000371100.4|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr1_-_28559502_28559570	0.0261589	NKX2-3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr1_-_198990166_198990193	0.0254113	NKX2-3	ENST00000427439.1|RP11-16L9.3|ENSG00000233410.1|RP11-16L9.3
hg19_v2_chr3_+_23847432_23847512	0.0252581	NKX2-3	ENST00000346855.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr1_+_35220613_35220718	0.0250507	NKX2-3	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr4_+_128802016_128802095	0.024642	NKX2-3	ENST00000270861.5|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000515069.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000513090.1|PLK4|ENSG00000142731.6|polo-like kinase 4 	ENST00000507249.1|PLK4|ENSG00000142731.6|polo-like kinase 4
hg19_v2_chr19_+_8953269_8953269	0.0241833	NKX2-3	ENST00000305625.2|MBD3L1|ENSG00000170948.3|methyl-CpG binding domain protein 3-like 1
hg19_v2_chr13_+_111766897_111766966	0.0228186	NKX2-3	ENST00000317133.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr16_+_2031633_2031633	0.0222651	NKX2-3	ENST00000598236.1|AC005606.1|ENSG00000269205.1|LOC283868 protein; Uncharacterized protein
hg19_v2_chr9_-_115819039_115819082	0.0210536	NKX2-3	ENST00000555206.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr15_+_91411810_91411828	0.0201276	NKX2-3	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr12_-_110434096_110434139	0.0189821	NKX2-3	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr12_+_10460549_10460585	0.0180021	NKX2-3	ENST00000543420.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000543777.1|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr11_-_46638720_46638788	0.0171568	NKX2-3	ENST00000326737.3|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr19_+_15751689_15751715	0.0167006	NKX2-3	ENST00000586182.2|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000591058.1|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000221307.8|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3
hg19_v2_chr7_-_87342564_87342617	0.016645	NKX2-3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr12_-_48119340_48119350	0.0166272	NKX2-3	ENST00000229003.3|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific
hg19_v2_chr3_+_113775576_113775592	0.0162288	NKX2-3	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr15_+_40674920_40674937	0.0158163	NKX2-3	ENST00000416151.2|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein 	ENST00000249776.8|KNSTRN|ENSG00000128944.9|kinetochore-localized astrin/SPAG5 binding protein
hg19_v2_chr1_-_31538517_31538632	0.0157044	NKX2-3	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr6_-_33239612_33239684	0.0151653	NKX2-3	ENST00000482399.1|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae) 	ENST00000445902.2|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae)
hg19_v2_chr12_-_122296755_122296770	0.0146918	NKX2-3	ENST00000289004.4|HPD|ENSG00000158104.7|4-hydroxyphenylpyruvate dioxygenase
hg19_v2_chr18_-_25616519_25616549	0.0130774	NKX2-3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr1_+_205682497_205682497	0.0130119	NKX2-3	ENST00000598338.1|AC119673.1|ENSG00000268313.1|AC119673.1
hg19_v2_chr3_+_108855558_108855733	0.0124467	NKX2-3	ENST00000467240.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000477643.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000479039.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1	ENST00000593799.1|RP11-59E19.1|ENSG00000241224.2|RP11-59E19.1
hg19_v2_chr16_-_15474904_15474904	0.0124222	NKX2-3	ENST00000534094.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr5_-_77072085_77072139	0.0118347	NKX2-3	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr4_-_39033963_39034047	0.01176	NKX2-3	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr8_-_101719159_101719226	0.0105271	NKX2-3	ENST00000520868.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522658.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr7_-_16505440_16505474	0.0100732	NKX2-3	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr17_+_53344945_53344977	0.00903007	NKX2-3	ENST00000575345.1|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr1_+_46806452_46806496	0.00774773	NKX2-3	ENST00000536062.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr16_+_14802801_14802801	0.00581346	NKX2-3	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr1_+_174670143_174670160	0.00570649	NKX2-3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr10_+_103348031_103348092	0.005643	NKX2-3	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr14_-_90798418_90798481	0.00306144	NKX2-3	ENST00000354366.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr12_-_124419531_124419531	0.00275878	NKX2-3	ENST00000514254.2|DNAH10OS|ENSG00000250091.2|dynein, axonemal, heavy chain 10 opposite strand
hg19_v2_chr12_+_14572070_14572164	0.00142759	NKX2-3	ENST00000545769.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000428217.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000396279.2|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000542514.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536279.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
