hg19_v2_chr8_+_84824920_84824948	2.64753	PAX1_PAX9	ENST00000523678.1|RP11-120I21.2|ENSG00000254202.1|RP11-120I21.2
hg19_v2_chr4_+_123747834_123747863	2.0163	PAX1_PAX9	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr8_-_125384927_125384952	1.88903	PAX1_PAX9	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr4_+_123747979_123747994	1.77413	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr6_+_34857019_34857117	1.46017	PAX1_PAX9	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr9_-_124991124_124991246	1.42656	PAX1_PAX9	ENST00000394319.4|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000340587.3|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr19_-_18995029_18995050	1.2212	PAX1_PAX9	ENST00000596048.1|CERS1|ENSG00000223802.3|ceramide synthase 1
hg19_v2_chr5_-_133747589_133747603	1.07215	PAX1_PAX9	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr13_+_21141270_21141349	0.71743	PAX1_PAX9	ENST00000319980.6|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000537103.1|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas) 	ENST00000389373.3|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chr13_+_21141208_21141265	0.654983	PAX1_PAX9	ENST00000351808.5|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chr17_-_39968406_39968451	0.426929	PAX1_PAX9	ENST00000393928.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr6_+_132891461_132891461	0.406977	PAX1_PAX9	ENST00000275198.1|TAAR6|ENSG00000146383.7|trace amine associated receptor 6
hg19_v2_chr17_-_39968855_39968880	0.390409	PAX1_PAX9	ENST00000355468.3|LEPREL4|ENSG00000141696.8|leprecan-like 4 	ENST00000590496.1|LEPREL4|ENSG00000141696.8|leprecan-like 4
hg19_v2_chr15_+_63569785_63569824	0.383491	PAX1_PAX9	ENST00000380343.4|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit 	ENST00000560353.1|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr17_+_76374714_76374759	0.381545	PAX1_PAX9	ENST00000262764.6|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000589689.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000329897.7|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000592043.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1 	ENST00000587356.1|PGS1|ENSG00000087157.14|phosphatidylglycerophosphate synthase 1
hg19_v2_chr15_+_63569731_63569783	0.314686	PAX1_PAX9	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr4_-_163085141_163085187	0.280206	PAX1_PAX9	ENST00000427802.2|FSTL5|ENSG00000168843.9|follistatin-like 5 	ENST00000306100.5|FSTL5|ENSG00000168843.9|follistatin-like 5
hg19_v2_chr2_+_119699864_119699905	0.264898	PAX1_PAX9	ENST00000541757.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure 	ENST00000412481.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chrX_-_153707545_153707596	0.236017	PAX1_PAX9	ENST00000357360.4|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr1_-_204165610_204165626	0.234823	PAX1_PAX9	ENST00000367194.4|KISS1|ENSG00000170498.7|KiSS-1 metastasis-suppressor
hg19_v2_chr18_-_47017956_47018210	0.206761	PAX1_PAX9	ENST00000584895.1|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000332968.6|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000580210.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579408.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr2_-_207629997_207630030	0.206633	PAX1_PAX9	ENST00000454776.2|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr1_-_162838551_162838628	0.205764	PAX1_PAX9	ENST00000367910.1|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110 	ENST00000367912.2|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110 	ENST00000367911.2|C1orf110|ENSG00000185860.9|chromosome 1 open reading frame 110
hg19_v2_chr3_+_15247686_15247784	0.202071	PAX1_PAX9	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr11_+_6947720_6947812	0.185725	PAX1_PAX9	ENST00000414517.2|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr17_+_15848231_15848231	0.185611	PAX1_PAX9	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chr7_-_112758665_112758672	0.182817	PAX1_PAX9	ENST00000397764.3|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr7_-_112758589_112758619	0.181729	PAX1_PAX9	ENST00000413744.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000439551.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000441359.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr9_-_104249400_104249512	0.173664	PAX1_PAX9	ENST00000374848.3|TMEM246|ENSG00000165152.4|transmembrane protein 246
hg19_v2_chr6_-_137494775_137494785	0.165021	PAX1_PAX9	ENST00000349184.4|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2 	ENST00000296980.2|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2 	ENST00000339602.3|IL22RA2|ENSG00000164485.10|interleukin 22 receptor, alpha 2
hg19_v2_chrX_-_148669116_148669116	0.160426	PAX1_PAX9	ENST00000243314.5|MAGEA9B|ENSG00000123584.7|melanoma antigen family A, 9B
hg19_v2_chrX_-_153707246_153707306	0.153924	PAX1_PAX9	ENST00000407062.1|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr17_-_3461092_3461126	0.15142	PAX1_PAX9	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr19_+_14184370_14184428	0.150006	PAX1_PAX9	ENST00000590772.1|hsa-mir-1199|ENSG00000141854.3|hsa-mir-1199
hg19_v2_chr1_-_213031418_213031449	0.145537	PAX1_PAX9	ENST00000356684.3|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head) 	ENST00000426161.1|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head) 	ENST00000424044.1|FLVCR1-AS1|ENSG00000198468.3|FLVCR1 antisense RNA 1 (head to head)
hg19_v2_chr2_-_162931052_162931063	0.144314	PAX1_PAX9	ENST00000360534.3|DPP4|ENSG00000197635.5|dipeptidyl-peptidase 4
hg19_v2_chr3_-_57113314_57113350	0.134785	PAX1_PAX9	ENST00000338458.4|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000468727.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr3_+_195447738_195447761	0.122826	PAX1_PAX9	ENST00000447234.2|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000320736.6|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000436408.1|MUC20|ENSG00000176945.12|mucin 20, cell surface associated
hg19_v2_chr4_+_619386_619407	0.119606	PAX1_PAX9	ENST00000496514.1|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
hg19_v2_chr11_+_6947647_6947698	0.112677	PAX1_PAX9	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr17_+_39969183_39969265	0.101847	PAX1_PAX9	ENST00000321562.4|FKBP10|ENSG00000141756.14|FK506 binding protein 10, 65 kDa
hg19_v2_chr3_-_25824872_25824913	0.0788417	PAX1_PAX9	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr9_-_21142144_21142144	0.0745089	PAX1_PAX9	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr3_+_31574189_31574282	0.0701021	PAX1_PAX9	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr1_+_160121356_160121363	0.0693935	PAX1_PAX9	ENST00000368081.4|ATP1A4|ENSG00000132681.12|ATPase, Na+/K+ transporting, alpha 4 polypeptide
hg19_v2_chr11_+_61522844_61522875	0.0647464	PAX1_PAX9	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr3_-_25824925_25825042	0.0590699	PAX1_PAX9	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr4_+_619347_619382	0.0567117	PAX1_PAX9	ENST00000255622.6|PDE6B|ENSG00000133256.8|phosphodiesterase 6B, cGMP-specific, rod, beta
hg19_v2_chr22_+_39745930_39746012	0.0539012	PAX1_PAX9	ENST00000318801.4|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000216155.7|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000406293.3|SYNGR1|ENSG00000100321.10|synaptogyrin 1 	ENST00000328933.5|SYNGR1|ENSG00000100321.10|synaptogyrin 1
hg19_v2_chr4_-_77997126_77997158	0.0529613	PAX1_PAX9	ENST00000537948.1|CCNI|ENSG00000118816.5|cyclin I 	ENST00000507788.1|CCNI|ENSG00000118816.5|cyclin I 	ENST00000237654.4|CCNI|ENSG00000118816.5|cyclin I
hg19_v2_chr10_-_99393242_99393344	0.0511112	PAX1_PAX9	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr6_-_170893742_170893754	0.0504398	PAX1_PAX9	ENST00000443345.2|PDCD2|ENSG00000071994.6|programmed cell death 2 	ENST00000541970.1|PDCD2|ENSG00000071994.6|programmed cell death 2
hg19_v2_chr14_+_24540046_24540132	0.0400691	PAX1_PAX9	ENST00000397016.2|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000537691.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000560356.1|CPNE6|ENSG00000100884.5|copine VI (neuronal) 	ENST00000558450.1|CPNE6|ENSG00000100884.5|copine VI (neuronal)
hg19_v2_chr17_-_7137582_7137637	0.0390101	PAX1_PAX9	ENST00000575756.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2 	ENST00000575458.1|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr19_-_52148798_52148798	0.0362665	PAX1_PAX9	ENST00000534261.2|SIGLEC5|ENSG00000105501.7|sialic acid binding Ig-like lectin 5
hg19_v2_chr19_-_5838768_5838836	0.0303101	PAX1_PAX9	ENST00000527106.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000531199.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000529165.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr8_-_121824374_121824391	0.0170969	PAX1_PAX9	ENST00000517992.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr7_+_142457315_142457330	0.0161916	PAX1_PAX9	ENST00000486171.1|PRSS1|ENSG00000204983.8|protease, serine, 1 (trypsin 1) 	ENST00000311737.7|PRSS1|ENSG00000204983.8|protease, serine, 1 (trypsin 1)
hg19_v2_chr22_-_41940404_41940610	0.00943593	PAX1_PAX9	ENST00000355209.4|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000337566.5|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000396504.2|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000407461.1|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v2_chr9_-_131418944_131419066	0.00560757	PAX1_PAX9	ENST00000419989.1|WDR34|ENSG00000119333.7|WD repeat domain 34 	ENST00000451652.1|WDR34|ENSG00000119333.7|WD repeat domain 34 	ENST00000372715.2|WDR34|ENSG00000119333.7|WD repeat domain 34
hg19_v2_chr6_+_3118926_3118976	0.00491079	PAX1_PAX9	ENST00000380379.5|BPHL|ENSG00000137274.8|biphenyl hydrolase-like (serine hydrolase)
hg19_v2_chr18_-_47018769_47018858	0.00418865	PAX1_PAX9	ENST00000583637.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000578528.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000578532.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000580387.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579248.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000581373.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr17_+_37356555_37356580	0.00157876	PAX1_PAX9	ENST00000579374.1|RPL19|ENSG00000108298.5|ribosomal protein L19
hg19_v2_chr7_-_144533074_144533153	0.000413336	PAX1_PAX9	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
