hg19_v2_chr6_+_116601265_116601288	0.251306	UGACAUC	ENST00000452085.3|DSE|ENSG00000111817.12|dermatan sulfate epimerase
hg19_v2_chr1_-_205782304_205782332	0.203958	UGACAUC	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr18_+_21693306_21693322	0.145146	UGACAUC	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr21_-_16437255_16437340	0.144566	UGACAUC	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr5_-_172756506_172756574	0.12103	UGACAUC	ENST00000265087.4|STC2|ENSG00000113739.6|stanniocalcin 2
hg19_v2_chr5_+_135364584_135364691	0.120287	UGACAUC	ENST00000442011.2|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa 	ENST00000305126.8|TGFBI|ENSG00000120708.12|transforming growth factor, beta-induced, 68kDa
hg19_v2_chr6_-_100912785_100912822	0.114902	UGACAUC	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr16_+_50187556_50187779	0.114388	UGACAUC	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr6_+_123317116_123317260	0.0957556	UGACAUC	ENST00000275162.5|CLVS2|ENSG00000146352.8|clavesin 2
hg19_v2_chr1_+_206808918_206808931	0.0767593	UGACAUC	ENST00000367108.3|DYRK3|ENSG00000143479.11|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3
hg19_v2_chr3_+_29322803_29322850	0.0710959	UGACAUC	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr7_-_98741642_98741713	0.0709633	UGACAUC	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr7_-_41742697_41742714	0.0682929	UGACAUC	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr7_+_43152191_43152211	0.066518	UGACAUC	ENST00000395891.2|HECW1|ENSG00000002746.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr10_+_98592009_98592061	0.0664013	UGACAUC	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr11_+_118307179_118307228	0.0651384	UGACAUC	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr14_-_45431091_45431175	0.0637915	UGACAUC	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr10_+_72575643_72575753	0.0600176	UGACAUC	ENST00000373202.3|SGPL1|ENSG00000166224.12|sphingosine-1-phosphate lyase 1
hg19_v2_chr2_-_100939195_100939195	0.0554084	UGACAUC	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr21_-_15755446_15755508	0.0528697	UGACAUC	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr8_+_56014949_56015048	0.0518586	UGACAUC	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr14_+_70078303_70078321	0.0518094	UGACAUC	ENST00000342745.4|KIAA0247|ENSG00000100647.7|KIAA0247
hg19_v2_chrX_+_64887512_64887537	0.0501236	UGACAUC	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr5_-_115910630_115910657	0.0500953	UGACAUC	ENST00000343348.6|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr17_+_27717415_27717618	0.0496066	UGACAUC	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr4_-_139163491_139163510	0.047097	UGACAUC	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr15_+_44719394_44719579	0.0469709	UGACAUC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr3_-_178790057_178790072	0.0467949	UGACAUC	ENST00000311417.2|ZMAT3|ENSG00000172667.6|zinc finger, matrin-type 3
hg19_v2_chr7_+_107110488_107110515	0.0465508	UGACAUC	ENST00000304402.4|GPR22|ENSG00000172209.4|G protein-coupled receptor 22
hg19_v2_chr3_-_113465065_113465147	0.0461763	UGACAUC	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr10_+_70480963_70481010	0.0457945	UGACAUC	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chrX_-_73834449_73834481	0.0457207	UGACAUC	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr4_-_153457197_153457268	0.0449565	UGACAUC	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr10_-_94003003_94003013	0.0434628	UGACAUC	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr18_-_65184217_65184217	0.0432677	UGACAUC	ENST00000310045.7|DSEL|ENSG00000171451.13|dermatan sulfate epimerase-like
hg19_v2_chr17_-_27621125_27621143	0.0432572	UGACAUC	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr20_-_10654639_10654694	0.0422835	UGACAUC	ENST00000254958.5|JAG1|ENSG00000101384.7|jagged 1
hg19_v2_chr11_-_132813566_132813624	0.041282	UGACAUC	ENST00000331898.7|OPCML|ENSG00000183715.9|opioid binding protein/cell adhesion molecule-like
hg19_v2_chr19_-_46476791_46476819	0.0406829	UGACAUC	ENST00000263257.5|NOVA2|ENSG00000104967.6|neuro-oncological ventral antigen 2
hg19_v2_chr2_-_161350305_161350391	0.0383743	UGACAUC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr8_+_132916318_132916401	0.0382487	UGACAUC	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr14_+_79745746_79745762	0.0378264	UGACAUC	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chrX_+_122993827_122993910	0.0376977	UGACAUC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr18_+_49866496_49866548	0.035831	UGACAUC	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr1_-_244013384_244013430	0.0350545	UGACAUC	ENST00000366539.1|AKT3|ENSG00000117020.12|v-akt murine thymoma viral oncogene homolog 3
hg19_v2_chr6_+_97372596_97372644	0.0346156	UGACAUC	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr1_+_50574585_50574638	0.034499	UGACAUC	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr2_-_27938593_27938615	0.0344468	UGACAUC	ENST00000379677.2|AC074091.13|ENSG00000205334.2|Uncharacterized protein
hg19_v2_chrX_+_110339439_110339605	0.0340872	UGACAUC	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr2_-_65357225_65357267	0.0339054	UGACAUC	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr10_-_27443155_27443288	0.0316113	UGACAUC	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr2_+_198318147_198318182	0.0312762	UGACAUC	ENST00000263960.2|COQ10B|ENSG00000115520.4|coenzyme Q10 homolog B (S. cerevisiae)
hg19_v2_chr4_-_103748880_103749047	0.0302688	UGACAUC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr13_+_96743093_96743093	0.0295835	UGACAUC	ENST00000376705.2|HS6ST3|ENSG00000185352.7|heparan sulfate 6-O-sulfotransferase 3
hg19_v2_chr6_-_39197226_39197258	0.0293679	UGACAUC	ENST00000359534.3|KCNK5|ENSG00000164626.8|potassium channel, subfamily K, member 5
hg19_v2_chr7_+_31092076_31092106	0.0290421	UGACAUC	ENST00000304166.4|ADCYAP1R1|ENSG00000078549.10|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I
hg19_v2_chr11_-_106889250_106889264	0.0286214	UGACAUC	ENST00000526355.2|GUCY1A2|ENSG00000152402.6|guanylate cyclase 1, soluble, alpha 2
hg19_v2_chr15_-_49255632_49255650	0.0281175	UGACAUC	ENST00000332408.4|SHC4|ENSG00000185634.7|SHC (Src homology 2 domain containing) family, member 4
hg19_v2_chr2_+_201170703_201170716	0.0276746	UGACAUC	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr15_+_59279851_59279880	0.0267384	UGACAUC	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
hg19_v2_chr4_+_166300084_166300094	0.0259204	UGACAUC	ENST00000402744.4|CPE|ENSG00000109472.9|carboxypeptidase E
hg19_v2_chr2_-_158485387_158485517	0.0258821	UGACAUC	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr13_-_73301819_73301830	0.0256789	UGACAUC	ENST00000377818.3|MZT1|ENSG00000204899.5|mitotic spindle organizing protein 1
hg19_v2_chr1_+_47137445_47137533	0.025656	UGACAUC	ENST00000569393.1|TEX38|ENSG00000186118.7|testis expressed 38 	ENST00000334122.4|TEX38|ENSG00000186118.7|testis expressed 38 	ENST00000415500.1|TEX38|ENSG00000186118.7|testis expressed 38
hg19_v2_chr12_+_54943134_54943182	0.0255907	UGACAUC	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr9_-_94186131_94186174	0.025197	UGACAUC	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr15_+_62853562_62853614	0.0247428	UGACAUC	ENST00000561311.1|TLN2|ENSG00000171914.10|talin 2
hg19_v2_chr3_+_85008089_85008189	0.0246692	UGACAUC	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr3_-_182698381_182698431	0.0246261	UGACAUC	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr6_+_163148161_163148181	0.0243815	UGACAUC	ENST00000337019.3|PACRG|ENSG00000112530.7|PARK2 co-regulated 	ENST00000366889.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr1_+_28995231_28995250	0.0232789	UGACAUC	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr6_-_88411911_88411928	0.0232048	UGACAUC	ENST00000257787.5|AKIRIN2|ENSG00000135334.8|akirin 2
hg19_v2_chr2_+_166326157_166326216	0.0217986	UGACAUC	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr1_-_114355083_114355123	0.0214723	UGACAUC	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chrX_-_118986911_118986988	0.0202182	UGACAUC	ENST00000276201.2|UPF3B|ENSG00000125351.6|UPF3 regulator of nonsense transcripts homolog B (yeast) 	ENST00000345865.2|UPF3B|ENSG00000125351.6|UPF3 regulator of nonsense transcripts homolog B (yeast)
hg19_v2_chr1_+_193091080_193091222	0.0202	UGACAUC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr18_+_63418068_63418157	0.0201316	UGACAUC	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr18_+_59854480_59854551	0.0200137	UGACAUC	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr9_+_116638562_116638606	0.0197973	UGACAUC	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr11_-_31839488_31839515	0.01882	UGACAUC	ENST00000419022.1|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379132.3|PAX6|ENSG00000007372.16|paired box 6 	ENST00000379129.2|PAX6|ENSG00000007372.16|paired box 6
hg19_v2_chr9_+_77112244_77112281	0.0185549	UGACAUC	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr17_-_36981556_36981734	0.0185348	UGACAUC	ENST00000536127.1|CWC25|ENSG00000108296.7|CWC25 spliceosome-associated protein homolog (S. cerevisiae) 	ENST00000225428.5|CWC25|ENSG00000108296.7|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v2_chr5_-_140998616_140998639	0.0185334	UGACAUC	ENST00000389054.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398562.2|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000389057.5|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398566.3|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000398557.4|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1 	ENST00000253811.6|DIAPH1|ENSG00000131504.11|diaphanous-related formin 1
hg19_v2_chr16_-_2264779_2264847	0.0185033	UGACAUC	ENST00000333503.7|PGP|ENSG00000184207.8|phosphoglycolate phosphatase
hg19_v2_chr2_-_178937478_178937510	0.0178589	UGACAUC	ENST00000286063.6|PDE11A|ENSG00000128655.12|phosphodiesterase 11A
hg19_v2_chr4_-_53525406_53525502	0.0176891	UGACAUC	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr11_+_9406169_9406210	0.0175798	UGACAUC	ENST00000379719.3|IPO7|ENSG00000205339.5|importin 7 	ENST00000527431.1|IPO7|ENSG00000205339.5|importin 7
hg19_v2_chr13_+_98605902_98605968	0.0175291	UGACAUC	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr12_+_95611516_95611527	0.0170951	UGACAUC	ENST00000436874.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr19_-_55954230_55954230	0.0169296	UGACAUC	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr18_+_22006580_22006614	0.0167365	UGACAUC	ENST00000284202.4|IMPACT|ENSG00000154059.5|impact RWD domain protein
hg19_v2_chr5_-_147162078_147162106	0.0166537	UGACAUC	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr10_+_11206925_11206993	0.0163608	UGACAUC	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr20_+_47538357_47538427	0.0163477	UGACAUC	ENST00000371917.4|ARFGEF2|ENSG00000124198.8|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)
hg19_v2_chr5_+_109025067_109025146	0.0152398	UGACAUC	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr16_+_24266874_24266917	0.0149583	UGACAUC	ENST00000005284.3|CACNG3|ENSG00000006116.3|calcium channel, voltage-dependent, gamma subunit 3
hg19_v2_chr17_+_59529743_59529798	0.0148323	UGACAUC	ENST00000589003.1|TBX4|ENSG00000121075.5|T-box 4 	ENST00000393853.4|TBX4|ENSG00000121075.5|T-box 4
hg19_v2_chr1_+_46668994_46669052	0.014638	UGACAUC	ENST00000371980.3|LURAP1|ENSG00000171357.5|leucine rich adaptor protein 1
hg19_v2_chr18_+_32558208_32558340	0.0137569	UGACAUC	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr3_+_45636219_45636351	0.0135358	UGACAUC	ENST00000273317.4|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chr15_+_51633826_51633858	0.0133634	UGACAUC	ENST00000335449.6|GLDN|ENSG00000186417.9|gliomedin
hg19_v2_chr2_+_172950227_172950264	0.0131285	UGACAUC	ENST00000341900.6|DLX1|ENSG00000144355.10|distal-less homeobox 1
hg19_v2_chr4_+_160188889_160188968	0.01307	UGACAUC	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr4_-_111544254_111544270	0.0128703	UGACAUC	ENST00000306732.3|PITX2|ENSG00000164093.11|paired-like homeodomain 2
hg19_v2_chr5_-_131132614_131132648	0.012524	UGACAUC	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr8_-_122653630_122653661	0.0122555	UGACAUC	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr19_-_18314836_18314884	0.011978	UGACAUC	ENST00000464076.3|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family 	ENST00000222256.4|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family
hg19_v2_chr9_-_135819987_135820020	0.0116812	UGACAUC	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr18_+_44526786_44526818	0.0115514	UGACAUC	ENST00000245121.5|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2 	ENST00000356157.7|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2
hg19_v2_chr20_+_49348081_49348096	0.0114	UGACAUC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chrX_-_124097620_124097666	0.0113227	UGACAUC	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr8_-_72987810_72987852	0.0110825	UGACAUC	ENST00000262209.4|TRPA1|ENSG00000104321.6|transient receptor potential cation channel, subfamily A, member 1
hg19_v2_chr6_-_114292449_114292474	0.0110769	UGACAUC	ENST00000519065.1|HDAC2|ENSG00000196591.7|histone deacetylase 2
hg19_v2_chr8_-_72268889_72268955	0.0109638	UGACAUC	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr2_+_28974668_28974729	0.0108608	UGACAUC	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr2_+_14775215_14775215	0.01083	UGACAUC	ENST00000581929.1|AC011897.1|ENSG00000265629.1|Uncharacterized protein
hg19_v2_chr16_-_62070305_62070310	0.0102357	UGACAUC	ENST00000584337.1|CDH8|ENSG00000150394.9|cadherin 8, type 2
hg19_v2_chr15_+_68570062_68570147	0.0101085	UGACAUC	ENST00000306917.4|FEM1B|ENSG00000169018.5|fem-1 homolog b (C. elegans)
hg19_v2_chr5_-_98262240_98262240	0.0100716	UGACAUC	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr5_+_60933634_60933637	0.0100657	UGACAUC	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr2_+_32582086_32582106	0.00998034	UGACAUC	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chrX_+_37865804_37865842	0.00997555	UGACAUC	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr4_+_75858290_75858305	0.00954911	UGACAUC	ENST00000513238.1|PARM1|ENSG00000169116.7|prostate androgen-regulated mucin-like protein 1
hg19_v2_chr14_-_25519095_25519280	0.00896253	UGACAUC	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr6_-_139695757_139695795	0.0088637	UGACAUC	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr10_+_98741041_98741041	0.00867512	UGACAUC	ENST00000286067.2|C10orf12|ENSG00000155640.5|chromosome 10 open reading frame 12
hg19_v2_chr7_-_19157248_19157295	0.00857735	UGACAUC	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr11_-_27528301_27528336	0.00773007	UGACAUC	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr20_-_9819479_9819532	0.0076638	UGACAUC	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr19_+_11071546_11071624	0.00737625	UGACAUC	ENST00000358026.2|SMARCA4|ENSG00000127616.13|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
hg19_v2_chr3_+_132136331_132136378	0.00676348	UGACAUC	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr6_+_117586713_117586737	0.00671582	UGACAUC	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr4_-_120988229_120988229	0.00577057	UGACAUC	ENST00000296509.6|MAD2L1|ENSG00000164109.9|MAD2 mitotic arrest deficient-like 1 (yeast)
hg19_v2_chr6_-_24911195_24911343	0.00574029	UGACAUC	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr10_+_112679301_112679346	0.00572945	UGACAUC	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr2_+_176972000_176972025	0.00539562	UGACAUC	ENST00000249504.5|HOXD11|ENSG00000128713.11|homeobox D11
hg19_v2_chr9_-_6015607_6015634	0.00500664	UGACAUC	ENST00000259569.5|RANBP6|ENSG00000137040.8|RAN binding protein 6
hg19_v2_chr12_-_102513843_102513908	0.00490271	UGACAUC	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr2_+_166095898_166095940	0.00456811	UGACAUC	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr12_-_29534074_29534127	0.00434299	UGACAUC	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr16_-_21663950_21663981	0.00400138	UGACAUC	ENST00000268389.4|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr16_+_9185450_9185516	0.00354484	UGACAUC	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr5_-_168728103_168728177	0.00294617	UGACAUC	ENST00000519560.1|SLIT3|ENSG00000184347.10|slit homolog 3 (Drosophila)
hg19_v2_chr11_+_105480793_105480848	0.00274351	UGACAUC	ENST00000282499.5|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000393127.2|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4 	ENST00000527669.1|GRIA4|ENSG00000152578.8|glutamate receptor, ionotropic, AMPA 4
hg19_v2_chr4_-_42154895_42154895	0.00249482	UGACAUC	ENST00000502486.1|BEND4|ENSG00000188848.11|BEN domain containing 4 	ENST00000504360.1|BEND4|ENSG00000188848.11|BEN domain containing 4
hg19_v2_chr1_-_108507631_108507809	0.00210059	UGACAUC	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr12_-_54673871_54673925	0.00194882	UGACAUC	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr6_-_13711773_13711796	0.00148852	UGACAUC	ENST00000011619.3|RANBP9|ENSG00000010017.9|RAN binding protein 9
hg19_v2_chr15_-_49447835_49447858	0.00148218	UGACAUC	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr4_+_71768043_71768095	0.000586404	UGACAUC	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr1_+_171810606_171810649	0.000375698	UGACAUC	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr3_+_145782358_145782358	0.000159822	UGACAUC	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
