Project
Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
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Results for AAUACUG
Z-value: 1.34
Motif logo
miRNA associated with seed AAUACUG
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_+_5632436 Show fit | 5.44 |
ENST00000340250.6
ENST00000382361.3 |
fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) |
|
| chrX_+_64887512 Show fit | 5.12 |
ENST00000360270.5
|
moesin |
|
| chr6_-_30654977 Show fit | 4.71 |
ENST00000399199.3
|
protein phosphatase 1, regulatory subunit 18 |
|
| chr7_-_41742697 Show fit | 4.62 |
ENST00000242208.4
|
inhibin, beta A |
|
| chr10_+_102106829 Show fit | 4.62 |
ENST00000370355.2
|
stearoyl-CoA desaturase (delta-9-desaturase) |
|
| chr2_+_210444142 Show fit | 3.71 |
ENST00000360351.4
ENST00000361559.4 |
microtubule-associated protein 2 |
|
| chr13_-_30881621 Show fit | 3.22 |
ENST00000380615.3
|
katanin p60 subunit A-like 1 |
|
| chr9_+_34990219 Show fit | 3.22 |
ENST00000541010.1
ENST00000454002.2 ENST00000545841.1 |
DnaJ (Hsp40) homolog, subfamily B, member 5 |
|
| chr12_+_1800179 Show fit | 3.13 |
ENST00000357103.4
|
adiponectin receptor 2 |
|
| chr7_+_36429409 Show fit | 3.12 |
ENST00000265748.2
|
anillin, actin binding protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AAUACUG
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 6.3 | GO:0070831 | basement membrane assembly(GO:0070831) |
| 0.9 | 5.4 | GO:0030035 | microspike assembly(GO:0030035) |
| 0.9 | 5.1 | GO:0022614 | membrane to membrane docking(GO:0022614) |
| 1.5 | 4.6 | GO:0060279 | regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279) |
| 1.5 | 4.6 | GO:1903964 | monounsaturated fatty acid metabolic process(GO:1903964) monounsaturated fatty acid biosynthetic process(GO:1903966) |
| 0.0 | 3.7 | GO:0006986 | response to unfolded protein(GO:0006986) |
| 0.3 | 3.5 | GO:0021785 | branchiomotor neuron axon guidance(GO:0021785) |
| 1.0 | 3.1 | GO:1904172 | regulation of bleb assembly(GO:1904170) positive regulation of bleb assembly(GO:1904172) |
| 0.3 | 3.1 | GO:0033211 | adiponectin-activated signaling pathway(GO:0033211) |
| 0.3 | 3.1 | GO:0051013 | microtubule severing(GO:0051013) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.1 | 5.4 | GO:0044393 | microspike(GO:0044393) |
| 0.4 | 5.1 | GO:0016600 | flotillin complex(GO:0016600) |
| 0.3 | 5.1 | GO:0031254 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
| 0.0 | 4.7 | GO:0001726 | ruffle(GO:0001726) |
| 1.5 | 4.6 | GO:0043511 | inhibin complex(GO:0043511) inhibin A complex(GO:0043512) |
| 0.9 | 3.7 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
| 0.0 | 3.7 | GO:0030027 | lamellipodium(GO:0030027) |
| 0.0 | 3.5 | GO:0030136 | clathrin-coated vesicle(GO:0030136) |
| 0.2 | 3.3 | GO:0045180 | basal cortex(GO:0045180) |
| 0.0 | 3.3 | GO:0031902 | late endosome membrane(GO:0031902) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 12.0 | GO:0051015 | actin filament binding(GO:0051015) |
| 0.0 | 6.3 | GO:0019902 | phosphatase binding(GO:0019902) |
| 0.0 | 5.2 | GO:0051087 | chaperone binding(GO:0051087) |
| 0.0 | 5.0 | GO:0003725 | double-stranded RNA binding(GO:0003725) |
| 1.5 | 4.6 | GO:0070699 | type II activin receptor binding(GO:0070699) |
| 0.9 | 4.6 | GO:0004768 | stearoyl-CoA 9-desaturase activity(GO:0004768) acyl-CoA desaturase activity(GO:0016215) |
| 0.2 | 4.4 | GO:0002162 | dystroglycan binding(GO:0002162) |
| 0.2 | 4.3 | GO:0035259 | glucocorticoid receptor binding(GO:0035259) |
| 0.0 | 4.3 | GO:0003714 | transcription corepressor activity(GO:0003714) |
| 0.0 | 3.7 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
Gene overrepresentation in C2:CP category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 9.6 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
| 0.1 | 5.7 | PID RHOA PATHWAY | RhoA signaling pathway |
| 0.1 | 5.2 | PID LKB1 PATHWAY | LKB1 signaling events |
| 0.1 | 4.3 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
| 0.1 | 3.8 | PID ALK1 PATHWAY | ALK1 signaling events |
| 0.0 | 3.3 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
| 0.1 | 3.1 | PID IL3 PATHWAY | IL3-mediated signaling events |
| 0.1 | 3.0 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
| 0.1 | 3.0 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
| 0.1 | 2.9 | PID EPO PATHWAY | EPO signaling pathway |
Gene overrepresentation in C2:CP:REACTOME category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.2 | 6.1 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
| 0.3 | 4.6 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |
| 0.1 | 4.4 | REACTOME RECYCLING PATHWAY OF L1 | Genes involved in Recycling pathway of L1 |
| 0.1 | 4.1 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
| 0.1 | 3.5 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
| 0.1 | 3.4 | REACTOME REGULATION OF HYPOXIA INDUCIBLE FACTOR HIF BY OXYGEN | Genes involved in Regulation of Hypoxia-inducible Factor (HIF) by Oxygen |
| 0.1 | 3.0 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
| 0.1 | 2.6 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
| 0.0 | 2.5 | REACTOME RNA POL II PRE TRANSCRIPTION EVENTS | Genes involved in RNA Polymerase II Pre-transcription Events |
| 0.1 | 2.4 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |