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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for ACCCUGU

Z-value: 0.18

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miRNA associated with seed ACCCUGU

NamemiRBASE accession
hsa-miR-10a-5p
MIMAT0000253
hsa-miR-10b-5p
MIMAT0000254

Activity profile of ACCCUGU motif

Sorted Z-values of ACCCUGU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr15_-_61521495 0.32 ENST00000335670.6
RORA
RAR-related orphan receptor A
chr1_-_217262969 0.23 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr6_+_107811162 0.16 ENST00000317357.5
SOBP
sine oculis binding protein homolog (Drosophila)
chr1_+_210406121 0.16 ENST00000367012.3
SERTAD4
SERTA domain containing 4
chr5_-_124080203 0.15 ENST00000504926.1
ZNF608
zinc finger protein 608
chr3_+_238273 0.15 ENST00000256509.2
CHL1
cell adhesion molecule L1-like
chr3_-_9994021 0.15 ENST00000411976.2
ENST00000412055.1
PRRT3
proline-rich transmembrane protein 3
chr2_+_10183651 0.14 ENST00000305883.1
KLF11
Kruppel-like factor 11
chr10_-_62149433 0.14 ENST00000280772.2
ANK3
ankyrin 3, node of Ranvier (ankyrin G)
chr11_-_115375107 0.14 ENST00000545380.1
ENST00000452722.3
ENST00000537058.1
ENST00000536727.1
ENST00000542447.2
ENST00000331581.6
CADM1
cell adhesion molecule 1
chr19_+_10527449 0.11 ENST00000592685.1
ENST00000380702.2
PDE4A
phosphodiesterase 4A, cAMP-specific
chr2_+_121103706 0.10 ENST00000295228.3
INHBB
inhibin, beta B
chr19_+_13135386 0.10 ENST00000360105.4
ENST00000588228.1
ENST00000591028.1
NFIX
nuclear factor I/X (CCAAT-binding transcription factor)
chr6_+_117002339 0.09 ENST00000413340.1
ENST00000368564.1
ENST00000356348.1
KPNA5
karyopherin alpha 5 (importin alpha 6)
chr4_-_100575781 0.09 ENST00000511828.1
RP11-766F14.2
Protein LOC285556
chr7_+_94139105 0.09 ENST00000297273.4
CASD1
CAS1 domain containing 1
chr16_-_70719925 0.09 ENST00000338779.6
MTSS1L
metastasis suppressor 1-like
chr16_+_57126428 0.09 ENST00000290776.8
CPNE2
copine II
chr1_-_39339777 0.08 ENST00000397572.2
MYCBP
MYC binding protein
chr6_-_91006461 0.08 ENST00000257749.4
ENST00000343122.3
ENST00000406998.2
ENST00000453877.1
BACH2
BTB and CNC homology 1, basic leucine zipper transcription factor 2
chr7_+_20370746 0.08 ENST00000222573.4
ITGB8
integrin, beta 8
chr1_-_94374946 0.08 ENST00000370238.3
GCLM
glutamate-cysteine ligase, modifier subunit
chr16_+_69599861 0.08 ENST00000354436.2
NFAT5
nuclear factor of activated T-cells 5, tonicity-responsive
chr22_-_17602200 0.08 ENST00000399875.1
CECR6
cat eye syndrome chromosome region, candidate 6
chrX_-_129402857 0.07 ENST00000447817.1
ENST00000370978.4
ZNF280C
zinc finger protein 280C
chr1_+_110082487 0.07 ENST00000527748.1
GPR61
G protein-coupled receptor 61
chr5_-_160973649 0.07 ENST00000393959.1
ENST00000517547.1
GABRB2
gamma-aminobutyric acid (GABA) A receptor, beta 2
chr1_+_28052456 0.07 ENST00000373954.6
ENST00000419687.2
FAM76A
family with sequence similarity 76, member A
chr9_-_127533519 0.07 ENST00000487099.2
ENST00000344523.4
ENST00000373584.3
NR6A1
nuclear receptor subfamily 6, group A, member 1
chr16_+_50187556 0.07 ENST00000561678.1
ENST00000357464.3
PAPD5
PAP associated domain containing 5
chr18_+_9136758 0.07 ENST00000383440.2
ENST00000262126.4
ENST00000577992.1
ANKRD12
ankyrin repeat domain 12
chr19_-_55954230 0.06 ENST00000376325.4
SHISA7
shisa family member 7
chr6_+_116421976 0.06 ENST00000319550.4
ENST00000419791.1
NT5DC1
5'-nucleotidase domain containing 1
chr5_-_45696253 0.06 ENST00000303230.4
HCN1
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
chr5_+_56205081 0.06 ENST00000285947.2
ENST00000541720.1
SETD9
SET domain containing 9
chr14_+_45366472 0.06 ENST00000325192.3
C14orf28
chromosome 14 open reading frame 28
chr8_+_1449532 0.06 ENST00000421627.2
DLGAP2
discs, large (Drosophila) homolog-associated protein 2
chr7_-_44924939 0.06 ENST00000395699.2
PURB
purine-rich element binding protein B
chr11_+_18344106 0.05 ENST00000534641.1
ENST00000525831.1
ENST00000265963.4
GTF2H1
general transcription factor IIH, polypeptide 1, 62kDa
chr2_+_208394616 0.05 ENST00000432329.2
ENST00000353267.3
ENST00000445803.1
CREB1
cAMP responsive element binding protein 1
chr3_-_142166904 0.05 ENST00000264951.4
XRN1
5'-3' exoribonuclease 1
chr2_+_238536207 0.05 ENST00000308482.9
LRRFIP1
leucine rich repeat (in FLII) interacting protein 1
chr1_+_57110972 0.05 ENST00000371244.4
PRKAA2
protein kinase, AMP-activated, alpha 2 catalytic subunit
chr1_+_93913713 0.05 ENST00000604705.1
ENST00000370253.2
FNBP1L
formin binding protein 1-like
chr1_-_19283163 0.05 ENST00000455833.2
IFFO2
intermediate filament family orphan 2
chr17_-_48207157 0.04 ENST00000330175.4
ENST00000503131.1
SAMD14
sterile alpha motif domain containing 14
chr4_-_53525406 0.04 ENST00000451218.2
ENST00000441222.3
USP46
ubiquitin specific peptidase 46
chr2_-_206950781 0.04 ENST00000403263.1
INO80D
INO80 complex subunit D
chr17_+_45727204 0.04 ENST00000290158.4
KPNB1
karyopherin (importin) beta 1
chrX_+_9431324 0.04 ENST00000407597.2
ENST00000424279.1
ENST00000536365.1
ENST00000441088.1
ENST00000380961.1
ENST00000415293.1
TBL1X
transducin (beta)-like 1X-linked
chr13_-_29069232 0.04 ENST00000282397.4
ENST00000541932.1
ENST00000539099.1
FLT1
fms-related tyrosine kinase 1
chr2_-_160472952 0.04 ENST00000541068.2
ENST00000355831.2
ENST00000343439.5
ENST00000392782.1
BAZ2B
bromodomain adjacent to zinc finger domain, 2B
chr5_-_90679145 0.04 ENST00000265138.3
ARRDC3
arrestin domain containing 3
chr17_+_4487294 0.03 ENST00000338859.4
SMTNL2
smoothelin-like 2
chr10_+_180987 0.03 ENST00000381591.1
ZMYND11
zinc finger, MYND-type containing 11
chr7_-_138666053 0.03 ENST00000440172.1
ENST00000422774.1
KIAA1549
KIAA1549
chr20_+_55204351 0.03 ENST00000201031.2
TFAP2C
transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
chr9_-_130661916 0.03 ENST00000373142.1
ENST00000373146.1
ENST00000373144.3
ST6GALNAC6
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
chr3_+_14989076 0.03 ENST00000413118.1
ENST00000425241.1
NR2C2
nuclear receptor subfamily 2, group C, member 2
chr1_-_39347255 0.03 ENST00000454994.2
ENST00000357771.3
GJA9
gap junction protein, alpha 9, 59kDa
chr2_+_148778570 0.03 ENST00000407073.1
MBD5
methyl-CpG binding domain protein 5
chr10_-_75173785 0.03 ENST00000535178.1
ENST00000372921.5
ENST00000372919.4
ANXA7
annexin A7
chr18_-_45456930 0.03 ENST00000262160.6
ENST00000587269.1
SMAD2
SMAD family member 2
chr12_+_69864129 0.03 ENST00000547219.1
ENST00000299293.2
ENST00000549921.1
ENST00000550316.1
ENST00000548154.1
ENST00000547414.1
ENST00000550389.1
ENST00000550937.1
ENST00000549092.1
ENST00000550169.1
FRS2
fibroblast growth factor receptor substrate 2
chr4_+_154125565 0.03 ENST00000338700.5
TRIM2
tripartite motif containing 2
chr10_-_79686284 0.03 ENST00000372391.2
ENST00000372388.2
DLG5
discs, large homolog 5 (Drosophila)
chr5_+_143584814 0.02 ENST00000507359.3
KCTD16
potassium channel tetramerization domain containing 16
chr2_-_37193606 0.02 ENST00000379213.2
ENST00000263918.4
STRN
striatin, calmodulin binding protein
chr22_+_40573921 0.02 ENST00000454349.2
ENST00000335727.9
TNRC6B
trinucleotide repeat containing 6B
chr14_+_23775971 0.02 ENST00000250405.5
BCL2L2
BCL2-like 2
chr4_+_184020398 0.02 ENST00000403733.3
ENST00000378925.3
WWC2
WW and C2 domain containing 2
chr4_-_66536057 0.02 ENST00000273854.3
EPHA5
EPH receptor A5
chr5_+_63461642 0.02 ENST00000296615.6
ENST00000381081.2
ENST00000389100.4
RNF180
ring finger protein 180
chr21_-_32931290 0.02 ENST00000286827.3
TIAM1
T-cell lymphoma invasion and metastasis 1
chr17_-_27621125 0.02 ENST00000579665.1
ENST00000225388.4
NUFIP2
nuclear fragile X mental retardation protein interacting protein 2
chr11_+_65101225 0.02 ENST00000528416.1
ENST00000415073.2
ENST00000252268.4
DPF2
D4, zinc and double PHD fingers family 2
chr1_+_109632425 0.02 ENST00000338272.8
TMEM167B
transmembrane protein 167B
chr4_-_152147579 0.02 ENST00000304527.4
ENST00000455740.1
ENST00000424281.1
ENST00000409598.4
SH3D19
SH3 domain containing 19
chr11_-_18656028 0.02 ENST00000336349.5
SPTY2D1
SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
chr10_+_89622870 0.02 ENST00000371953.3
PTEN
phosphatase and tensin homolog
chr1_+_89990431 0.02 ENST00000330947.2
ENST00000358200.4
LRRC8B
leucine rich repeat containing 8 family, member B
chr17_-_76713100 0.02 ENST00000585509.1
CYTH1
cytohesin 1
chr14_+_33408449 0.02 ENST00000346562.2
ENST00000341321.4
ENST00000548645.1
ENST00000356141.4
ENST00000357798.5
NPAS3
neuronal PAS domain protein 3
chr7_-_72936531 0.02 ENST00000339594.4
BAZ1B
bromodomain adjacent to zinc finger domain, 1B
chr19_+_3880581 0.02 ENST00000450849.2
ENST00000301260.6
ENST00000398448.3
ATCAY
ataxia, cerebellar, Cayman type
chrX_+_28605516 0.01 ENST00000378993.1
IL1RAPL1
interleukin 1 receptor accessory protein-like 1
chr6_-_11044509 0.01 ENST00000354666.3
ELOVL2
ELOVL fatty acid elongase 2
chr1_+_22889953 0.01 ENST00000374644.4
ENST00000166244.3
ENST00000538803.1
EPHA8
EPH receptor A8
chr10_+_98592009 0.01 ENST00000540664.1
ENST00000371103.3
LCOR
ligand dependent nuclear receptor corepressor
chr4_+_134070439 0.01 ENST00000264360.5
PCDH10
protocadherin 10
chr1_+_36396677 0.01 ENST00000373191.4
ENST00000397828.2
AGO3
argonaute RISC catalytic component 3
chr2_+_176981307 0.01 ENST00000249501.4
HOXD10
homeobox D10
chr22_+_45559722 0.01 ENST00000347635.4
ENST00000407019.2
ENST00000424634.1
ENST00000417702.1
ENST00000425733.2
ENST00000430547.1
NUP50
nucleoporin 50kDa
chr12_-_77459306 0.01 ENST00000547316.1
ENST00000416496.2
ENST00000550669.1
ENST00000322886.7
E2F7
E2F transcription factor 7
chr22_+_30279144 0.01 ENST00000401950.2
ENST00000333027.3
ENST00000445401.1
ENST00000323630.5
ENST00000351488.3
MTMR3
myotubularin related protein 3
chr9_-_115983641 0.01 ENST00000238256.3
FKBP15
FK506 binding protein 15, 133kDa
chr3_-_179754706 0.01 ENST00000465751.1
ENST00000467460.1
PEX5L
peroxisomal biogenesis factor 5-like
chrX_-_54384425 0.01 ENST00000375169.3
ENST00000354646.2
WNK3
WNK lysine deficient protein kinase 3
chr3_+_178866199 0.01 ENST00000263967.3
PIK3CA
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
chr7_-_106301405 0.01 ENST00000523505.1
CCDC71L
coiled-coil domain containing 71-like
chr3_-_196159268 0.01 ENST00000381887.3
ENST00000535858.1
ENST00000428095.1
ENST00000296328.4
UBXN7
UBX domain protein 7
chr12_-_14956396 0.01 ENST00000535328.1
ENST00000261167.2
WBP11
WW domain binding protein 11
chr2_-_164592497 0.01 ENST00000333129.3
ENST00000409634.1
FIGN
fidgetin
chr3_+_183873098 0.01 ENST00000313143.3
DVL3
dishevelled segment polarity protein 3
chr17_+_36861735 0.01 ENST00000378137.5
ENST00000325718.7
MLLT6
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
chr9_-_86595503 0.01 ENST00000376281.4
ENST00000376264.2
HNRNPK
heterogeneous nuclear ribonucleoprotein K
chr9_+_100263912 0.01 ENST00000259365.4
TMOD1
tropomodulin 1
chr12_-_133405288 0.01 ENST00000204726.3
GOLGA3
golgin A3
chr6_+_71377473 0.01 ENST00000370452.3
ENST00000316999.5
ENST00000370455.3
SMAP1
small ArfGAP 1
chr1_+_145477060 0.00 ENST00000369308.3
LIX1L
Lix1 homolog (mouse)-like
chr19_-_14316980 0.00 ENST00000361434.3
ENST00000340736.6
LPHN1
latrophilin 1
chr17_-_73775839 0.00 ENST00000592643.1
ENST00000591890.1
ENST00000587171.1
ENST00000254810.4
ENST00000589599.1
H3F3B
H3 histone, family 3B (H3.3B)
chr2_-_69870835 0.00 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr4_+_79697495 0.00 ENST00000502871.1
ENST00000335016.5
BMP2K
BMP2 inducible kinase
chr17_+_46125707 0.00 ENST00000584137.1
ENST00000362042.3
ENST00000585291.1
ENST00000357480.5
NFE2L1
nuclear factor, erythroid 2-like 1
chr10_-_128994422 0.00 ENST00000522781.1
FAM196A
family with sequence similarity 196, member A
chr15_+_44719394 0.00 ENST00000260327.4
ENST00000396780.1
CTDSPL2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
chr10_-_30348439 0.00 ENST00000375377.1
KIAA1462
KIAA1462
chrX_-_46618490 0.00 ENST00000328306.4
SLC9A7
solute carrier family 9, subfamily A (NHE7, cation proton antiporter 7), member 7
chr7_-_112430647 0.00 ENST00000312814.6
TMEM168
transmembrane protein 168

Network of associatons between targets according to the STRING database.

First level regulatory network of ACCCUGU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0072660 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0 0.1 GO:0042271 susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)
0.0 0.1 GO:0060279 regulation of ovulation(GO:0060278) positive regulation of ovulation(GO:0060279)
0.0 0.1 GO:1904387 cellular response to thyroxine stimulus(GO:0097069) cellular response to L-phenylalanine derivative(GO:1904387)
0.0 0.3 GO:0021694 cerebellar Purkinje cell layer formation(GO:0021694) cerebellar Purkinje cell differentiation(GO:0021702)
0.0 0.0 GO:0071879 positive regulation of adrenergic receptor signaling pathway(GO:0071879)
0.0 0.1 GO:0071409 cellular response to cycloheximide(GO:0071409)
0.0 0.0 GO:0031291 Ran protein signal transduction(GO:0031291)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0034686 integrin alphav-beta8 complex(GO:0034686)
0.0 0.1 GO:0017109 glutamate-cysteine ligase complex(GO:0017109)
0.0 0.1 GO:0098855 HCN channel complex(GO:0098855)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0032184 SUMO polymer binding(GO:0032184)
0.0 0.3 GO:0008142 oxysterol binding(GO:0008142)
0.0 0.2 GO:0050682 AF-2 domain binding(GO:0050682)
0.0 0.1 GO:0004357 glutamate-cysteine ligase activity(GO:0004357)
0.0 0.1 GO:0047322 [hydroxymethylglutaryl-CoA reductase (NADPH)] kinase activity(GO:0047322) [acetyl-CoA carboxylase] kinase activity(GO:0050405)
0.0 0.1 GO:0005222 intracellular cAMP activated cation channel activity(GO:0005222)
0.0 0.1 GO:1990430 extracellular matrix protein binding(GO:1990430)
0.0 0.1 GO:0005237 inhibitory extracellular ligand-gated ion channel activity(GO:0005237)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.4 REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA Genes involved in Circadian Repression of Expression by REV-ERBA