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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for AGCACCA

Z-value: 0.77

Motif logo

miRNA associated with seed AGCACCA

NamemiRBASE accession
MIMAT0000086
MIMAT0000100
MIMAT0000681

Activity profile of AGCACCA motif

Sorted Z-values of AGCACCA motif

Promoter Log-likelihood Transcript Gene Gene Info
chr8_-_23261589 2.25 ENST00000524168.1
ENST00000523833.2
ENST00000519243.1
ENST00000389131.3
lysyl oxidase-like 2
chr1_-_17304771 2.13 ENST00000375534.3
microfibrillar-associated protein 2
chr2_-_1748214 2.00 ENST00000433670.1
ENST00000425171.1
ENST00000252804.4
peroxidasin homolog (Drosophila)
chrX_-_107681633 1.70 ENST00000394872.2
ENST00000334504.7
collagen, type IV, alpha 6
chr1_+_151030234 1.59 ENST00000368921.3
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11
chr13_+_110959598 1.58 ENST00000360467.5
collagen, type IV, alpha 2
chr16_+_55512742 1.56 ENST00000568715.1
ENST00000219070.4
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
chr20_-_43280361 1.43 ENST00000372874.4
adenosine deaminase
chr3_-_48632593 1.42 ENST00000454817.1
ENST00000328333.8
collagen, type VII, alpha 1
chr17_-_48278983 1.30 ENST00000225964.5
collagen, type I, alpha 1
chr1_-_113498943 1.20 ENST00000369626.3
solute carrier family 16 (monocarboxylate transporter), member 1
chr2_-_190044480 1.16 ENST00000374866.3
collagen, type V, alpha 2
chr15_+_81071684 1.09 ENST00000220244.3
ENST00000394685.3
ENST00000356249.5
KIAA1199
chr2_-_230933709 1.02 ENST00000436869.1
ENST00000295190.4
solute carrier family 16, member 14
chr20_-_5591626 1.02 ENST00000379019.4
glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
chr7_+_100797678 0.95 ENST00000337619.5
adaptor-related protein complex 1, sigma 1 subunit
chr17_-_8055747 0.94 ENST00000317276.4
ENST00000581703.1
period circadian clock 1
chr19_+_48216600 0.93 ENST00000263277.3
ENST00000538399.1
EH-domain containing 2
chr7_-_143059845 0.91 ENST00000443739.2
family with sequence similarity 131, member B
chr7_+_130126012 0.89 ENST00000341441.5
mesoderm specific transcript
chr9_-_110251836 0.87 ENST00000374672.4
Kruppel-like factor 4 (gut)
chr12_-_67072714 0.87 ENST00000545666.1
ENST00000398016.3
ENST00000359742.4
ENST00000286445.7
ENST00000538211.1
glutamate receptor interacting protein 1
chr1_+_182992545 0.83 ENST00000258341.4
laminin, gamma 1 (formerly LAMB2)
chr5_-_139726181 0.80 ENST00000507104.1
ENST00000230990.6
heparin-binding EGF-like growth factor
chr2_-_238323007 0.79 ENST00000295550.4
collagen, type VI, alpha 3
chrX_-_106959631 0.73 ENST00000486554.1
ENST00000372390.4
TSC22 domain family, member 3
chr7_-_128049955 0.73 ENST00000419067.2
ENST00000378717.4
IMP (inosine 5'-monophosphate) dehydrogenase 1
chr4_+_113066552 0.73 ENST00000309733.5
chromosome 4 open reading frame 32
chr11_+_842808 0.72 ENST00000397397.2
ENST00000397411.2
ENST00000397396.1
tetraspanin 4
chr15_+_42066632 0.70 ENST00000457542.2
ENST00000221214.6
ENST00000260357.7
ENST00000456763.2
mitogen-activated protein kinase binding protein 1
chr3_+_99357319 0.69 ENST00000452013.1
ENST00000261037.3
ENST00000273342.4
collagen, type VIII, alpha 1
chr8_+_42752053 0.69 ENST00000307602.4
hook microtubule-tethering protein 3
chr17_-_40575535 0.68 ENST00000357037.5
polymerase I and transcript release factor
chr18_-_28681950 0.68 ENST00000251081.6
desmocollin 2
chr6_-_43596899 0.67 ENST00000307126.5
ENST00000452781.1
GTP binding protein 2
chr16_-_19729502 0.67 ENST00000219837.7
lysine-rich nucleolar protein 1
chr2_+_211342432 0.66 ENST00000430249.2
carbamoyl-phosphate synthase 1, mitochondrial
chr14_-_35182994 0.66 ENST00000341223.3
cofilin 2 (muscle)
chr6_-_99797522 0.66 ENST00000389677.5
failed axon connections homolog (Drosophila)
chr10_-_75634260 0.65 ENST00000372765.1
ENST00000351293.3
calcium/calmodulin-dependent protein kinase II gamma
chr4_-_80994210 0.64 ENST00000403729.2
anthrax toxin receptor 2
chr6_+_15246501 0.64 ENST00000341776.2
jumonji, AT rich interactive domain 2
chr12_-_69326940 0.64 ENST00000549781.1
ENST00000548262.1
ENST00000551568.1
ENST00000548954.1
carboxypeptidase M
chr6_+_43737939 0.64 ENST00000372067.3
vascular endothelial growth factor A
chr4_+_99182593 0.64 ENST00000508213.1
ENST00000408927.3
ENST00000514122.1
ENST00000453712.2
ENST00000511212.1
ENST00000408900.3
ENST00000339360.5
RAP1, GTP-GDP dissociation stimulator 1
chr13_+_109248500 0.63 ENST00000356711.2
myosin XVI
chr2_-_220094294 0.62 ENST00000436856.1
ENST00000428226.1
ENST00000409422.1
ENST00000431715.1
ENST00000457841.1
ENST00000439812.1
ENST00000361242.4
ENST00000396761.2
autophagy related 9A
chr6_-_33547975 0.62 ENST00000442998.2
ENST00000360661.5
BCL2-antagonist/killer 1
chrX_-_109561294 0.61 ENST00000372059.2
ENST00000262844.5
Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr1_+_203595903 0.60 ENST00000367218.3
ENST00000367219.3
ENST00000391954.2
ATPase, Ca++ transporting, plasma membrane 4
chr11_+_117049445 0.60 ENST00000324225.4
ENST00000532960.1
SID1 transmembrane family, member 2
chr11_-_119599794 0.60 ENST00000264025.3
poliovirus receptor-related 1 (herpesvirus entry mediator C)
chrX_-_51239425 0.59 ENST00000375992.3
nudix (nucleoside diphosphate linked moiety X)-type motif 11
chr5_-_146833485 0.58 ENST00000398514.3
dihydropyrimidinase-like 3
chr9_+_124413873 0.58 ENST00000408936.3
DAB2 interacting protein
chr12_+_60083118 0.58 ENST00000261187.4
ENST00000543448.1
solute carrier family 16 (monocarboxylate transporter), member 7
chrY_+_15016725 0.58 ENST00000336079.3
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
chr10_+_101419187 0.58 ENST00000370489.4
ectonucleoside triphosphate diphosphohydrolase 7
chr14_+_55034599 0.57 ENST00000392067.3
ENST00000357634.3
sterile alpha motif domain containing 4A
chr2_-_227664474 0.56 ENST00000305123.5
insulin receptor substrate 1
chr13_-_103451307 0.56 ENST00000376004.4
KDEL (Lys-Asp-Glu-Leu) containing 1
chr6_+_70576457 0.55 ENST00000322773.4
collagen, type XIX, alpha 1
chr20_+_306221 0.55 ENST00000342665.2
SRY (sex determining region Y)-box 12
chr12_+_4382917 0.55 ENST00000261254.3
cyclin D2
chr17_+_26662730 0.55 ENST00000226225.2
tumor necrosis factor, alpha-induced protein 1 (endothelial)
chr12_+_13349650 0.54 ENST00000256951.5
ENST00000431267.2
ENST00000542474.1
ENST00000544053.1
epithelial membrane protein 1
chrX_-_71351678 0.54 ENST00000609883.1
ENST00000545866.1
retrotransposon gag domain containing 4
chr11_-_102962929 0.54 ENST00000260247.5
DCN1, defective in cullin neddylation 1, domain containing 5
chr1_-_244013384 0.53 ENST00000366539.1
v-akt murine thymoma viral oncogene homolog 3
chr5_-_43313574 0.53 ENST00000325110.6
ENST00000433297.2
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chr19_-_47249679 0.53 ENST00000263280.6
striatin, calmodulin binding protein 4
chr16_-_56459354 0.52 ENST00000290649.5
autocrine motility factor receptor, E3 ubiquitin protein ligase
chr2_-_96811170 0.52 ENST00000288943.4
dual specificity phosphatase 2
chr5_-_157002775 0.51 ENST00000257527.4
ADAM metallopeptidase domain 19
chr11_-_117186946 0.51 ENST00000313005.6
ENST00000528053.1
beta-site APP-cleaving enzyme 1
chr18_-_24445729 0.51 ENST00000383168.4
aquaporin 4
chr7_-_124405681 0.50 ENST00000303921.2
G protein-coupled receptor 37 (endothelin receptor type B-like)
chr4_-_10458982 0.49 ENST00000326756.3
zinc finger protein 518B
chr19_+_34287751 0.49 ENST00000590771.1
ENST00000589786.1
ENST00000284006.6
ENST00000588881.1
potassium channel tetramerization domain containing 15
chr1_+_40627038 0.48 ENST00000372771.4
rearranged L-myc fusion
chr6_+_30524663 0.48 ENST00000376560.3
proline rich 3
chr4_+_124320665 0.48 ENST00000394339.2
sprouty homolog 1, antagonist of FGF signaling (Drosophila)
chr3_+_158991025 0.47 ENST00000337808.6
IQCJ-SCHIP1 readthrough
chr20_-_25604811 0.47 ENST00000304788.3
N-acetylneuraminic acid phosphatase
chr2_+_70142189 0.47 ENST00000264444.2
MAX dimerization protein 1
chr11_+_60691924 0.47 ENST00000544065.1
ENST00000453848.2
ENST00000005286.4
transmembrane protein 132A
chr11_+_75273101 0.46 ENST00000533603.1
ENST00000358171.3
ENST00000526242.1
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)
chr3_-_57678772 0.46 ENST00000311128.5
DENN/MADD domain containing 6A
chr3_+_159557637 0.45 ENST00000445224.2
schwannomin interacting protein 1
chr3_+_43732362 0.45 ENST00000458276.2
abhydrolase domain containing 5
chr18_+_29027696 0.44 ENST00000257189.4
desmoglein 3
chr11_+_66188475 0.44 ENST00000311034.2
neuronal PAS domain protein 4
chr15_+_52121822 0.44 ENST00000558455.1
ENST00000308580.7
tropomodulin 3 (ubiquitous)
chr5_-_141704566 0.44 ENST00000344120.4
ENST00000434127.2
sprouty homolog 4 (Drosophila)
chr5_-_122372354 0.44 ENST00000306442.4
peptidylprolyl isomerase C (cyclophilin C)
chr6_-_30043539 0.44 ENST00000376751.3
ENST00000244360.6
ring finger protein 39
chr12_+_104359576 0.43 ENST00000392872.3
ENST00000436021.2
thymine-DNA glycosylase
chr1_-_166028709 0.43 ENST00000595430.1
AL626787.1
chr12_-_8088871 0.43 ENST00000075120.7
solute carrier family 2 (facilitated glucose transporter), member 3
chr1_-_27816556 0.43 ENST00000536657.1
WAS protein family, member 2
chr22_+_40390930 0.43 ENST00000333407.6
family with sequence similarity 83, member F
chr14_+_75745477 0.43 ENST00000303562.4
ENST00000554617.1
ENST00000554212.1
ENST00000535987.1
ENST00000555242.1
FBJ murine osteosarcoma viral oncogene homolog
chr12_+_88536067 0.42 ENST00000549011.1
ENST00000266712.6
ENST00000551088.1
transmembrane and tetratricopeptide repeat containing 3
chr2_+_48541776 0.42 ENST00000413569.1
ENST00000340553.3
forkhead box N2
chr15_-_55562582 0.42 ENST00000396307.2
RAB27A, member RAS oncogene family
chr6_+_142468361 0.42 ENST00000367630.4
vesicle (multivesicular body) trafficking 1
chr2_-_134326009 0.42 ENST00000409261.1
ENST00000409213.1
NCK-associated protein 5
chr9_+_112403088 0.41 ENST00000448454.2
paralemmin 2
chr8_-_66754172 0.41 ENST00000401827.3
phosphodiesterase 7A
chr12_-_28124903 0.41 ENST00000395872.1
ENST00000354417.3
ENST00000201015.4
parathyroid hormone-like hormone
chr4_+_128703295 0.41 ENST00000296464.4
ENST00000508549.1
heat shock 70kDa protein 4-like
chr15_+_79724858 0.40 ENST00000305428.3
KIAA1024
chr20_+_34700333 0.40 ENST00000441639.1
erythrocyte membrane protein band 4.1-like 1
chr5_+_176560742 0.40 ENST00000439151.2
nuclear receptor binding SET domain protein 1
chrX_+_21958674 0.39 ENST00000404933.2
spermine synthase
chr9_-_34126730 0.39 ENST00000361264.4
DDB1 and CUL4 associated factor 12
chr6_+_125283566 0.39 ENST00000521654.2
ring finger protein 217
chr11_-_101454658 0.39 ENST00000344327.3
transient receptor potential cation channel, subfamily C, member 6
chr7_-_28220354 0.39 ENST00000283928.5
JAZF zinc finger 1
chr3_+_182971018 0.38 ENST00000326505.3
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr12_-_133464151 0.38 ENST00000315585.7
ENST00000266880.7
ENST00000443047.2
ENST00000432561.2
ENST00000450056.2
checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase
chr5_+_149887672 0.38 ENST00000261797.6
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
chr8_-_82024290 0.38 ENST00000220597.4
phosphoprotein associated with glycosphingolipid microdomains 1
chr2_+_208576355 0.37 ENST00000420822.1
ENST00000295414.3
ENST00000339882.5
cyclin Y-like 1
chr17_-_41623716 0.37 ENST00000319349.5
ets variant 4
chr18_+_59992527 0.36 ENST00000586569.1
tumor necrosis factor receptor superfamily, member 11a, NFKB activator
chr12_+_50898881 0.36 ENST00000301180.5
DIP2 disco-interacting protein 2 homolog B (Drosophila)
chrX_+_9754461 0.36 ENST00000380913.3
shroom family member 2
chr10_-_33246722 0.36 ENST00000437302.1
ENST00000396033.2
integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)
chr1_+_184356188 0.36 ENST00000235307.6
chromosome 1 open reading frame 21
chr15_-_68724490 0.35 ENST00000315757.7
ENST00000423218.2
integrin, alpha 11
chr19_-_16738984 0.35 ENST00000600060.1
ENST00000263390.3
mediator complex subunit 26
chr14_+_103851712 0.34 ENST00000440884.3
ENST00000416682.2
ENST00000429436.2
ENST00000303622.9
MAP/microtubule affinity-regulating kinase 3
chr1_+_215740709 0.34 ENST00000259154.4
potassium channel tetramerization domain containing 3
chr1_+_165796753 0.34 ENST00000367879.4
uridine-cytidine kinase 2
chr20_+_30555805 0.34 ENST00000562532.2
XK, Kell blood group complex subunit-related family, member 7
chr15_-_72612470 0.33 ENST00000287202.5
CUGBP, Elav-like family member 6
chr7_+_116139424 0.33 ENST00000222693.4
caveolin 2
chr7_+_73442102 0.33 ENST00000445912.1
ENST00000252034.7
elastin
chr8_-_125384927 0.33 ENST00000297632.6
transmembrane protein 65
chr17_+_38333263 0.33 ENST00000456989.2
ENST00000543876.1
ENST00000544503.1
ENST00000264644.6
ENST00000538884.1
Rap guanine nucleotide exchange factor (GEF)-like 1
chr22_-_39096661 0.33 ENST00000216039.5
Josephin domain containing 1
chr1_-_3447967 0.33 ENST00000294599.4
multiple EGF-like-domains 6
chr4_+_144257915 0.33 ENST00000262995.4
GRB2-associated binding protein 1
chr10_+_12110963 0.33 ENST00000263035.4
ENST00000437298.1
dehydrogenase E1 and transketolase domain containing 1
chr12_+_56915713 0.33 ENST00000262031.5
ENST00000552247.2
RNA binding motif, single stranded interacting protein 2
chr10_+_18948311 0.32 ENST00000377275.3
ADP-ribosylation factor-like 5B
chr14_-_99737565 0.32 ENST00000357195.3
B-cell CLL/lymphoma 11B (zinc finger protein)
chr17_-_57784755 0.32 ENST00000537860.1
ENST00000393038.2
ENST00000409433.2
peptidyl-tRNA hydrolase 2
chr19_+_47104493 0.31 ENST00000291295.9
ENST00000597743.1
calmodulin 3 (phosphorylase kinase, delta)
chr10_+_105036909 0.31 ENST00000369849.4
internexin neuronal intermediate filament protein, alpha
chr2_-_208634287 0.31 ENST00000295417.3
frizzled family receptor 5
chr17_-_28618948 0.31 ENST00000261714.6
bleomycin hydrolase
chr11_+_35965531 0.31 ENST00000528989.1
ENST00000524419.1
ENST00000315571.5
low density lipoprotein receptor class A domain containing 3
chr10_+_80828774 0.31 ENST00000334512.5
zinc finger, MIZ-type containing 1
chr20_+_42295745 0.30 ENST00000396863.4
ENST00000217026.4
v-myb avian myeloblastosis viral oncogene homolog-like 2
chr13_+_41363581 0.30 ENST00000338625.4
solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
chr3_-_119813264 0.30 ENST00000264235.8
glycogen synthase kinase 3 beta
chr8_+_11141925 0.30 ENST00000221086.3
myotubularin related protein 9
chr5_+_14664762 0.30 ENST00000284274.4
family with sequence similarity 105, member B
chr15_+_73976545 0.30 ENST00000318443.5
ENST00000537340.2
ENST00000318424.5
CD276 molecule
chr1_-_151138323 0.30 ENST00000368908.5
LysM, putative peptidoglycan-binding, domain containing 1
chrX_+_107683096 0.29 ENST00000328300.6
ENST00000361603.2
collagen, type IV, alpha 5
chr12_-_8025442 0.29 ENST00000340749.5
ENST00000535295.1
ENST00000539234.1
solute carrier family 2 (facilitated glucose transporter), member 14
chrX_+_73641286 0.29 ENST00000587091.1
solute carrier family 16, member 2 (thyroid hormone transporter)
chr5_-_78809950 0.29 ENST00000334082.6
homer homolog 1 (Drosophila)
chr1_+_218519577 0.29 ENST00000366930.4
ENST00000366929.4
transforming growth factor, beta 2
chr7_+_106809406 0.29 ENST00000468410.1
ENST00000478930.1
ENST00000464009.1
ENST00000222574.4
HMG-box transcription factor 1
chr11_+_74459876 0.29 ENST00000299563.4
ring finger protein 169
chr9_+_5629025 0.29 ENST00000251879.6
ENST00000414202.2
KIAA1432
chr6_+_64281906 0.29 ENST00000370651.3
protein tyrosine phosphatase type IVA, member 1
chr3_+_191046810 0.29 ENST00000392455.3
ENST00000392456.3
coiled-coil domain containing 50
chr14_-_45431091 0.29 ENST00000579157.1
ENST00000396128.4
ENST00000556500.1
kelch-like family member 28
chr1_+_206557366 0.28 ENST00000414007.1
ENST00000419187.2
SLIT-ROBO Rho GTPase activating protein 2
chr7_-_25019760 0.28 ENST00000352860.1
ENST00000353930.1
ENST00000431825.2
ENST00000313367.2
oxysterol binding protein-like 3
chr10_-_105615164 0.28 ENST00000355946.2
ENST00000369774.4
SH3 and PX domains 2A
chr5_+_157170703 0.28 ENST00000286307.5
LSM11, U7 small nuclear RNA associated
chrX_+_41192595 0.28 ENST00000399959.2
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
chr12_+_112563335 0.28 ENST00000549358.1
ENST00000257604.5
ENST00000548092.1
ENST00000552896.1
TRAF-type zinc finger domain containing 1
chr6_+_53883708 0.28 ENST00000514921.1
ENST00000274897.5
ENST00000370877.2
muscular LMNA-interacting protein
chr10_+_89622870 0.28 ENST00000371953.3
phosphatase and tensin homolog
chr4_-_157892498 0.28 ENST00000502773.1
platelet derived growth factor C
chr19_-_44100275 0.28 ENST00000422989.1
ENST00000598324.1
immunity-related GTPase family, Q
chr9_+_116917807 0.27 ENST00000356083.3
collagen, type XXVII, alpha 1
chr15_+_68570062 0.27 ENST00000306917.4
fem-1 homolog b (C. elegans)
chr15_+_78730531 0.27 ENST00000258886.8
iron-responsive element binding protein 2
chr7_-_112579869 0.27 ENST00000297145.4
chromosome 7 open reading frame 60
chr6_+_106959718 0.27 ENST00000369066.3
absent in melanoma 1
chr9_-_123555655 0.27 ENST00000340778.5
ENST00000453291.1
ENST00000608872.1
F-box and WD repeat domain containing 2
chr1_-_155881156 0.27 ENST00000539040.1
ENST00000368323.3
Ras-like without CAAX 1
chr1_+_2160134 0.26 ENST00000378536.4
v-ski avian sarcoma viral oncogene homolog
chr17_-_7297833 0.26 ENST00000571802.1
ENST00000576201.1
ENST00000573213.1
ENST00000324822.11
TMEM256-PLSCR3 readthrough (NMD candidate)
chr12_+_62654119 0.26 ENST00000353364.3
ENST00000549523.1
ENST00000280377.5
ubiquitin specific peptidase 15
chr20_-_32700075 0.26 ENST00000374980.2
eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
chr12_-_6451235 0.26 ENST00000440083.2
ENST00000162749.2
tumor necrosis factor receptor superfamily, member 1A
chr14_+_103058948 0.26 ENST00000262241.6
REST corepressor 1
chr3_-_122233723 0.25 ENST00000493510.1
ENST00000344337.6
ENST00000476916.1
ENST00000465882.1
karyopherin alpha 1 (importin alpha 5)
chr2_+_120517174 0.25 ENST00000263708.2
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
chr13_+_28195988 0.25 ENST00000399697.3
ENST00000399696.1
polymerase (RNA) I polypeptide D, 16kDa
chr22_-_39640756 0.25 ENST00000331163.6
platelet-derived growth factor beta polypeptide

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCACCA

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.4 GO:0006154 adenosine catabolic process(GO:0006154) inosine biosynthetic process(GO:0046103)
0.4 1.2 GO:0051780 mevalonate transport(GO:0015728) behavioral response to nutrient(GO:0051780)
0.4 1.2 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.4 1.1 GO:0044691 tooth eruption(GO:0044691)
0.3 0.9 GO:0014740 negative regulation of muscle hyperplasia(GO:0014740)
0.3 2.3 GO:0048050 post-embryonic eye morphogenesis(GO:0048050)
0.2 1.6 GO:0001957 intramembranous ossification(GO:0001957) direct ossification(GO:0036072)
0.2 0.6 GO:1903572 regulation of protein kinase D signaling(GO:1903570) positive regulation of protein kinase D signaling(GO:1903572)
0.2 0.6 GO:0031077 post-embryonic camera-type eye development(GO:0031077)
0.2 0.6 GO:1900082 regulation of cellular amine catabolic process(GO:0033241) negative regulation of cellular amine catabolic process(GO:0033242) negative regulation of the force of heart contraction(GO:0098736) regulation of arginine catabolic process(GO:1900081) negative regulation of arginine catabolic process(GO:1900082) regulation of citrulline biosynthetic process(GO:1903248) negative regulation of citrulline biosynthetic process(GO:1903249) negative regulation of cellular amino acid biosynthetic process(GO:2000283)
0.2 0.2 GO:0050653 chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0050653)
0.2 0.7 GO:0071400 cellular response to oleic acid(GO:0071400)
0.2 0.8 GO:0051541 elastin metabolic process(GO:0051541)
0.2 0.5 GO:0060940 epithelial to mesenchymal transition involved in cardiac fibroblast development(GO:0060940)
0.2 0.6 GO:0044805 late nucleophagy(GO:0044805)
0.1 2.2 GO:0038065 collagen-activated signaling pathway(GO:0038065)
0.1 0.9 GO:2000323 negative regulation of glucocorticoid receptor signaling pathway(GO:2000323)
0.1 0.4 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 0.9 GO:2001137 positive regulation of endocytic recycling(GO:2001137)
0.1 0.4 GO:0071848 circadian temperature homeostasis(GO:0060086) regulation of fever generation by regulation of prostaglandin secretion(GO:0071810) positive regulation of fever generation by positive regulation of prostaglandin secretion(GO:0071812) positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling(GO:0071848) regulation of fever generation by prostaglandin secretion(GO:0100009)
0.1 0.7 GO:0006177 GMP biosynthetic process(GO:0006177)
0.1 0.6 GO:0043553 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324) negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
0.1 0.5 GO:2000049 positive regulation of cell-cell adhesion mediated by cadherin(GO:2000049)
0.1 0.4 GO:1904862 inhibitory synapse assembly(GO:1904862)
0.1 0.4 GO:1902544 regulation of DNA N-glycosylase activity(GO:1902544)
0.1 0.4 GO:0070837 dehydroascorbic acid transport(GO:0070837)
0.1 0.2 GO:0010621 negative regulation of transcription by transcription factor localization(GO:0010621)
0.1 1.0 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.1 0.3 GO:1904339 superior temporal gyrus development(GO:0071109) negative regulation of dopaminergic neuron differentiation(GO:1904339)
0.1 0.7 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.8 GO:0035873 lactate transport(GO:0015727) lactate transmembrane transport(GO:0035873)
0.1 0.6 GO:1901910 diadenosine polyphosphate catabolic process(GO:0015961) diphosphoinositol polyphosphate metabolic process(GO:0071543) diadenosine pentaphosphate metabolic process(GO:1901906) diadenosine pentaphosphate catabolic process(GO:1901907) diadenosine hexaphosphate metabolic process(GO:1901908) diadenosine hexaphosphate catabolic process(GO:1901909) adenosine 5'-(hexahydrogen pentaphosphate) metabolic process(GO:1901910) adenosine 5'-(hexahydrogen pentaphosphate) catabolic process(GO:1901911)
0.1 0.3 GO:0007206 phospholipase C-activating G-protein coupled glutamate receptor signaling pathway(GO:0007206)
0.1 0.3 GO:0051795 apoptotic process involved in outflow tract morphogenesis(GO:0003275) negative regulation of alkaline phosphatase activity(GO:0010693) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256)
0.1 0.3 GO:0003363 lamellipodium assembly involved in ameboidal cell migration(GO:0003363) extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration(GO:0021816)
0.1 0.4 GO:0010710 regulation of collagen catabolic process(GO:0010710)
0.1 0.7 GO:0022027 interkinetic nuclear migration(GO:0022027)
0.1 0.3 GO:0046035 CMP salvage(GO:0006238) CMP biosynthetic process(GO:0009224) CMP metabolic process(GO:0046035)
0.1 1.6 GO:0051901 positive regulation of mitochondrial depolarization(GO:0051901)
0.1 0.2 GO:0010716 negative regulation of extracellular matrix disassembly(GO:0010716)
0.1 0.8 GO:0086042 cardiac muscle cell-cardiac muscle cell adhesion(GO:0086042)
0.1 0.3 GO:0031064 negative regulation of histone deacetylation(GO:0031064)
0.1 0.7 GO:0003433 chondrocyte development involved in endochondral bone morphogenesis(GO:0003433)
0.1 0.1 GO:0071284 cellular response to lead ion(GO:0071284)
0.1 0.3 GO:0014859 negative regulation of skeletal muscle cell proliferation(GO:0014859) negative regulation of skeletal muscle satellite cell proliferation(GO:1902723)
0.1 0.6 GO:0070236 negative regulation of activation-induced cell death of T cells(GO:0070236)
0.1 0.4 GO:1903435 positive regulation of constitutive secretory pathway(GO:1903435)
0.1 0.3 GO:1903984 negative regulation of ribosome biogenesis(GO:0090071) positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.1 0.3 GO:0060743 epithelial cell maturation involved in prostate gland development(GO:0060743)
0.1 0.8 GO:0033227 dsRNA transport(GO:0033227)
0.1 0.3 GO:0035616 histone H2B conserved C-terminal lysine deubiquitination(GO:0035616)
0.1 2.3 GO:0032332 positive regulation of chondrocyte differentiation(GO:0032332)
0.1 4.9 GO:0030574 collagen catabolic process(GO:0030574)
0.1 0.2 GO:1905064 metanephric glomerular mesangial cell development(GO:0072255) reversible differentiation(GO:0090677) cell dedifferentiation involved in phenotypic switching(GO:0090678) positive regulation of phenotypic switching(GO:1900241) negative regulation of vascular smooth muscle cell differentiation(GO:1905064) regulation of vascular smooth muscle cell dedifferentiation(GO:1905174) positive regulation of vascular smooth muscle cell dedifferentiation(GO:1905176) vascular smooth muscle cell dedifferentiation(GO:1990936)
0.1 0.2 GO:0043686 co-translational protein modification(GO:0043686)
0.1 0.6 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000)
0.1 0.2 GO:0042357 thiamine diphosphate metabolic process(GO:0042357)
0.1 2.0 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 0.4 GO:0001661 conditioned taste aversion(GO:0001661)
0.1 0.2 GO:1903778 protein localization to vacuolar membrane(GO:1903778)
0.1 0.2 GO:1903215 negative regulation of protein targeting to mitochondrion(GO:1903215)
0.1 0.3 GO:0043418 homocysteine catabolic process(GO:0043418)
0.1 0.3 GO:1903378 positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway(GO:1903378)
0.1 0.3 GO:0007296 vitellogenesis(GO:0007296)
0.1 0.3 GO:1903352 L-ornithine transmembrane transport(GO:1903352)
0.0 0.5 GO:0045915 positive regulation of catecholamine metabolic process(GO:0045915) positive regulation of dopamine metabolic process(GO:0045964)
0.0 0.6 GO:0032471 negative regulation of endoplasmic reticulum calcium ion concentration(GO:0032471)
0.0 0.2 GO:0045163 clustering of voltage-gated potassium channels(GO:0045163)
0.0 0.1 GO:0006500 N-terminal protein palmitoylation(GO:0006500)
0.0 0.3 GO:0044789 modulation by host of viral release from host cell(GO:0044789) positive regulation by host of viral release from host cell(GO:0044791) positive regulation of dopamine receptor signaling pathway(GO:0060161)
0.0 0.3 GO:0072675 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.0 0.1 GO:1990737 response to manganese-induced endoplasmic reticulum stress(GO:1990737)
0.0 0.5 GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014)
0.0 0.4 GO:0000414 regulation of histone H3-K36 methylation(GO:0000414)
0.0 0.1 GO:2000646 positive regulation of receptor catabolic process(GO:2000646)
0.0 0.4 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.2 GO:0060282 positive regulation of oocyte development(GO:0060282)
0.0 0.8 GO:0010614 negative regulation of cardiac muscle hypertrophy(GO:0010614)
0.0 0.2 GO:0007198 adenylate cyclase-inhibiting serotonin receptor signaling pathway(GO:0007198)
0.0 0.1 GO:1903028 positive regulation of opsonization(GO:1903028)
0.0 0.0 GO:1904582 regulation of intracellular mRNA localization(GO:1904580) positive regulation of intracellular mRNA localization(GO:1904582)
0.0 0.7 GO:0030043 actin filament fragmentation(GO:0030043)
0.0 0.2 GO:0003406 retinal pigment epithelium development(GO:0003406)
0.0 0.4 GO:0010898 positive regulation of triglyceride catabolic process(GO:0010898)
0.0 0.2 GO:0039534 negative regulation of MDA-5 signaling pathway(GO:0039534)
0.0 0.3 GO:0071651 positive regulation of chemokine (C-C motif) ligand 5 production(GO:0071651)
0.0 0.2 GO:0060399 positive regulation of growth hormone receptor signaling pathway(GO:0060399)
0.0 0.1 GO:0001544 initiation of primordial ovarian follicle growth(GO:0001544)
0.0 0.5 GO:0015074 DNA integration(GO:0015074)
0.0 0.1 GO:0060557 regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0032829) positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0032831) positive regulation of vitamin metabolic process(GO:0046136) positive regulation of vitamin D biosynthetic process(GO:0060557) positive regulation of calcidiol 1-monooxygenase activity(GO:0060559)
0.0 1.1 GO:0031581 hemidesmosome assembly(GO:0031581)
0.0 0.1 GO:0061743 motor learning(GO:0061743)
0.0 0.2 GO:0038172 interleukin-33-mediated signaling pathway(GO:0038172)
0.0 0.5 GO:0045793 positive regulation of cell size(GO:0045793)
0.0 0.3 GO:0006398 mRNA 3'-end processing by stem-loop binding and cleavage(GO:0006398)
0.0 0.1 GO:1900239 phenotypic switching(GO:0036166) regulation of phenotypic switching(GO:1900239)
0.0 0.2 GO:0033031 positive regulation of neutrophil apoptotic process(GO:0033031)
0.0 0.5 GO:0006054 N-acetylneuraminate metabolic process(GO:0006054)
0.0 0.5 GO:0033197 response to vitamin E(GO:0033197)
0.0 0.2 GO:0060296 regulation of cilium movement involved in cell motility(GO:0060295) regulation of cilium beat frequency involved in ciliary motility(GO:0060296) regulation of cilium-dependent cell motility(GO:1902019)
0.0 0.6 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.3 GO:0060052 neurofilament cytoskeleton organization(GO:0060052)
0.0 0.3 GO:0035331 negative regulation of hippo signaling(GO:0035331)
0.0 0.2 GO:1904627 response to phorbol 13-acetate 12-myristate(GO:1904627) cellular response to phorbol 13-acetate 12-myristate(GO:1904628)
0.0 0.2 GO:0002051 osteoblast fate commitment(GO:0002051)
0.0 0.6 GO:0034656 nucleobase-containing small molecule catabolic process(GO:0034656)
0.0 0.2 GO:1903898 negative regulation of PERK-mediated unfolded protein response(GO:1903898)
0.0 0.2 GO:0010641 positive regulation of platelet-derived growth factor receptor signaling pathway(GO:0010641)
0.0 0.1 GO:0034729 histone H3-K79 methylation(GO:0034729)
0.0 0.7 GO:1901897 regulation of relaxation of cardiac muscle(GO:1901897)
0.0 0.4 GO:1904903 ESCRT complex disassembly(GO:1904896) ESCRT III complex disassembly(GO:1904903)
0.0 0.1 GO:0001922 B-1 B cell homeostasis(GO:0001922)
0.0 0.4 GO:0045176 apical protein localization(GO:0045176)
0.0 0.2 GO:0017185 peptidyl-lysine hydroxylation(GO:0017185)
0.0 0.2 GO:1902219 negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress(GO:1902219)
0.0 0.2 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.0 0.1 GO:0010847 regulation of chromatin assembly(GO:0010847)
0.0 0.0 GO:0086023 adrenergic receptor signaling pathway involved in heart process(GO:0086023)
0.0 0.3 GO:0021942 radial glia guided migration of Purkinje cell(GO:0021942)
0.0 0.3 GO:2000210 positive regulation of anoikis(GO:2000210)
0.0 0.6 GO:0051764 actin crosslink formation(GO:0051764)
0.0 0.2 GO:0090205 positive regulation of cholesterol metabolic process(GO:0090205)
0.0 0.2 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.3 GO:0071550 death-inducing signaling complex assembly(GO:0071550)
0.0 0.2 GO:0010713 negative regulation of collagen metabolic process(GO:0010713) negative regulation of collagen biosynthetic process(GO:0032966)
0.0 0.2 GO:0036093 male germ cell proliferation(GO:0002176) germ cell proliferation(GO:0036093)
0.0 0.2 GO:0051388 positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388)
0.0 0.0 GO:1900222 negative regulation of beta-amyloid clearance(GO:1900222)
0.0 0.3 GO:0045078 positive regulation of interferon-gamma biosynthetic process(GO:0045078)
0.0 0.2 GO:0010994 regulation of ubiquitin homeostasis(GO:0010993) free ubiquitin chain polymerization(GO:0010994)
0.0 0.5 GO:0071481 cellular response to X-ray(GO:0071481)
0.0 0.2 GO:1902514 regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1902514)
0.0 0.1 GO:0048672 positive regulation of collateral sprouting(GO:0048672)
0.0 0.3 GO:0070327 thyroid hormone transport(GO:0070327)
0.0 0.1 GO:1903361 protein localization to basolateral plasma membrane(GO:1903361)
0.0 1.0 GO:0006509 membrane protein ectodomain proteolysis(GO:0006509)
0.0 0.1 GO:1901165 positive regulation of trophoblast cell migration(GO:1901165)
0.0 0.5 GO:0032060 bleb assembly(GO:0032060)
0.0 0.0 GO:0061582 intestinal epithelial cell migration(GO:0061582)
0.0 0.2 GO:0003065 positive regulation of heart rate by epinephrine(GO:0003065)
0.0 0.2 GO:0061179 negative regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0061179)
0.0 0.2 GO:0007258 JUN phosphorylation(GO:0007258)
0.0 0.4 GO:0045116 protein neddylation(GO:0045116)
0.0 0.4 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.1 GO:0016240 autophagosome docking(GO:0016240)
0.0 0.1 GO:0031584 activation of phospholipase D activity(GO:0031584)
0.0 0.1 GO:0035281 pre-miRNA export from nucleus(GO:0035281)
0.0 0.1 GO:0071409 cellular response to cycloheximide(GO:0071409)
0.0 0.1 GO:0051987 positive regulation of attachment of spindle microtubules to kinetochore(GO:0051987)
0.0 0.4 GO:0035855 megakaryocyte development(GO:0035855)
0.0 0.2 GO:0070933 histone H4 deacetylation(GO:0070933)
0.0 0.2 GO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching(GO:0060666)
0.0 0.2 GO:0000920 cell separation after cytokinesis(GO:0000920)
0.0 0.2 GO:0061036 positive regulation of cartilage development(GO:0061036)
0.0 0.2 GO:0002063 chondrocyte development(GO:0002063)
0.0 0.0 GO:1902174 positive regulation of keratinocyte apoptotic process(GO:1902174)
0.0 0.3 GO:0032688 negative regulation of interferon-beta production(GO:0032688)
0.0 0.5 GO:1904380 endoplasmic reticulum mannose trimming(GO:1904380)
0.0 0.1 GO:0019375 galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)
0.0 0.1 GO:0061314 Notch signaling involved in heart development(GO:0061314)
0.0 0.1 GO:2000795 negative regulation of epithelial cell proliferation involved in lung morphogenesis(GO:2000795)
0.0 0.9 GO:0050690 regulation of defense response to virus by virus(GO:0050690)
0.0 0.2 GO:0005981 regulation of glycogen catabolic process(GO:0005981)
0.0 0.4 GO:0035024 negative regulation of Rho protein signal transduction(GO:0035024)
0.0 0.1 GO:0035878 nail development(GO:0035878)
0.0 0.1 GO:0034141 positive regulation of toll-like receptor 3 signaling pathway(GO:0034141)
0.0 0.5 GO:0006833 water transport(GO:0006833)
0.0 0.2 GO:0001514 selenocysteine incorporation(GO:0001514) translational readthrough(GO:0006451)
0.0 0.0 GO:1903371 regulation of endoplasmic reticulum tubular network organization(GO:1903371)
0.0 0.1 GO:0045048 protein insertion into ER membrane(GO:0045048)
0.0 0.6 GO:0000188 inactivation of MAPK activity(GO:0000188)
0.0 0.0 GO:0035526 retrograde transport, plasma membrane to Golgi(GO:0035526)
0.0 0.1 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.0 0.2 GO:0030208 dermatan sulfate biosynthetic process(GO:0030208)
0.0 0.0 GO:1901301 regulation of cargo loading into COPII-coated vesicle(GO:1901301)
0.0 0.2 GO:0038092 nodal signaling pathway(GO:0038092)
0.0 0.1 GO:0032455 nerve growth factor processing(GO:0032455)
0.0 0.1 GO:0048733 sebaceous gland development(GO:0048733)
0.0 0.2 GO:0030949 positive regulation of vascular endothelial growth factor receptor signaling pathway(GO:0030949)
0.0 0.1 GO:0015798 myo-inositol transport(GO:0015798)
0.0 0.3 GO:0002076 osteoblast development(GO:0002076)
0.0 0.4 GO:0006198 cAMP catabolic process(GO:0006198)
0.0 0.3 GO:2000780 negative regulation of double-strand break repair(GO:2000780)
0.0 0.0 GO:2000653 DNA hypomethylation(GO:0044028) hypomethylation of CpG island(GO:0044029) regulation of genetic imprinting(GO:2000653)
0.0 0.1 GO:0045722 positive regulation of gluconeogenesis(GO:0045722)
0.0 0.0 GO:1904294 positive regulation of ERAD pathway(GO:1904294)
0.0 0.3 GO:0035728 response to hepatocyte growth factor(GO:0035728)
0.0 0.1 GO:0035871 protein K11-linked deubiquitination(GO:0035871)
0.0 0.3 GO:0007171 activation of transmembrane receptor protein tyrosine kinase activity(GO:0007171)
0.0 0.1 GO:0060087 relaxation of vascular smooth muscle(GO:0060087)
0.0 0.3 GO:0035428 hexose transmembrane transport(GO:0035428) glucose transmembrane transport(GO:1904659)
0.0 0.1 GO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.0 0.1 GO:0070544 histone H3-K36 demethylation(GO:0070544)
0.0 0.1 GO:0035624 receptor transactivation(GO:0035624)
0.0 0.1 GO:0043249 erythrocyte maturation(GO:0043249)
0.0 0.1 GO:0034086 maintenance of sister chromatid cohesion(GO:0034086) maintenance of mitotic sister chromatid cohesion(GO:0034088)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 4.3 GO:0098645 network-forming collagen trimer(GO:0098642) collagen network(GO:0098645)
0.4 1.1 GO:0005588 collagen type V trimer(GO:0005588)
0.4 1.4 GO:0030934 anchoring collagen complex(GO:0030934)
0.2 0.7 GO:0034681 integrin alpha11-beta1 complex(GO:0034681)
0.2 0.8 GO:0043259 laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259) laminin-11 complex(GO:0043260)
0.2 0.6 GO:1990032 parallel fiber(GO:1990032)
0.2 1.2 GO:0030121 AP-1 adaptor complex(GO:0030121)
0.1 1.6 GO:0098643 fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643)
0.1 0.6 GO:0005899 insulin receptor complex(GO:0005899)
0.1 0.3 GO:0031523 Myb complex(GO:0031523)
0.1 0.7 GO:0070695 FHF complex(GO:0070695)
0.1 0.5 GO:0097129 cyclin D2-CDK4 complex(GO:0097129)
0.1 0.4 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.2 GO:0034676 integrin alpha6-beta4 complex(GO:0034676)
0.1 1.7 GO:0043205 microfibril(GO:0001527) fibril(GO:0043205)
0.1 0.8 GO:0005589 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.1 0.4 GO:0035976 AP1 complex(GO:0035976)
0.0 0.6 GO:0097136 Bcl-2 family protein complex(GO:0097136)
0.0 0.2 GO:0061673 mitotic spindle astral microtubule(GO:0061673)
0.0 0.0 GO:0048237 rough endoplasmic reticulum lumen(GO:0048237)
0.0 0.1 GO:0036449 microtubule minus-end(GO:0036449)
0.0 0.4 GO:0036057 filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057)
0.0 0.3 GO:0005593 FACIT collagen trimer(GO:0005593)
0.0 0.3 GO:0071953 elastic fiber(GO:0071953)
0.0 0.7 GO:0031209 SCAR complex(GO:0031209)
0.0 0.7 GO:0097431 mitotic spindle pole(GO:0097431)
0.0 0.0 GO:0005943 phosphatidylinositol 3-kinase complex, class IA(GO:0005943)
0.0 0.2 GO:1990452 Parkin-FBXW7-Cul1 ubiquitin ligase complex(GO:1990452)
0.0 0.5 GO:0036513 Derlin-1 retrotranslocation complex(GO:0036513)
0.0 0.3 GO:0005683 U7 snRNP(GO:0005683)
0.0 1.1 GO:0030057 desmosome(GO:0030057)
0.0 0.4 GO:0033093 Weibel-Palade body(GO:0033093)
0.0 0.3 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.0 0.5 GO:0032433 filopodium tip(GO:0032433)
0.0 0.9 GO:0032839 dendrite cytoplasm(GO:0032839)
0.0 0.3 GO:0035749 myelin sheath adaxonal region(GO:0035749)
0.0 0.3 GO:0044327 dendritic spine head(GO:0044327)
0.0 0.2 GO:0042587 glycogen granule(GO:0042587)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.2 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 0.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.6 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.0 2.2 GO:0005604 basement membrane(GO:0005604)
0.0 0.1 GO:0042272 nuclear RNA export factor complex(GO:0042272)
0.0 0.1 GO:0043194 axon initial segment(GO:0043194)
0.0 0.2 GO:0071438 invadopodium membrane(GO:0071438)
0.0 0.6 GO:0097228 sperm principal piece(GO:0097228)
0.0 0.2 GO:0005883 neurofilament(GO:0005883)
0.0 0.3 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.2 GO:0033256 I-kappaB/NF-kappaB complex(GO:0033256)
0.0 0.7 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.0 0.1 GO:0097025 MPP7-DLG1-LIN7 complex(GO:0097025)
0.0 0.1 GO:0098554 cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 1.8 GO:0031093 platelet alpha granule lumen(GO:0031093)
0.0 0.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.0 0.9 GO:0031941 filamentous actin(GO:0031941)
0.0 0.4 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.0 0.2 GO:0030877 beta-catenin destruction complex(GO:0030877)
0.0 0.8 GO:0042645 nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645)
0.0 0.2 GO:0002116 semaphorin receptor complex(GO:0002116)
0.0 0.1 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.0 0.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 0.1 GO:0097504 Gemini of coiled bodies(GO:0097504)
0.0 0.4 GO:0005719 nuclear euchromatin(GO:0005719)
0.0 0.1 GO:0031045 dense core granule(GO:0031045)
0.0 0.1 GO:0005916 fascia adherens(GO:0005916)
0.0 0.8 GO:0030669 clathrin-coated endocytic vesicle membrane(GO:0030669)
0.0 0.2 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.1 GO:0044300 cerebellar mossy fiber(GO:0044300)
0.0 0.7 GO:0033017 sarcoplasmic reticulum membrane(GO:0033017)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.0 GO:0004720 protein-lysine 6-oxidase activity(GO:0004720)
0.4 2.0 GO:0005152 interleukin-1 receptor antagonist activity(GO:0005152)
0.4 1.2 GO:0015130 mevalonate transmembrane transporter activity(GO:0015130)
0.3 1.0 GO:0047389 glycerophosphocholine phosphodiesterase activity(GO:0047389)
0.2 0.7 GO:0004087 carbamoyl-phosphate synthase (ammonia) activity(GO:0004087) carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity(GO:0004088)
0.2 0.6 GO:0036487 nitric-oxide synthase inhibitor activity(GO:0036487)
0.2 0.7 GO:0003938 IMP dehydrogenase activity(GO:0003938)
0.2 0.9 GO:0001010 transcription factor activity, sequence-specific DNA binding transcription factor recruiting(GO:0001010)
0.2 0.5 GO:1904288 BAT3 complex binding(GO:1904288)
0.2 0.5 GO:0008330 protein tyrosine/threonine phosphatase activity(GO:0008330)
0.2 0.5 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.1 0.4 GO:0043739 G/U mismatch-specific uracil-DNA glycosylase activity(GO:0043739)
0.1 0.6 GO:0005477 pyruvate secondary active transmembrane transporter activity(GO:0005477)
0.1 0.4 GO:0042799 histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.1 0.8 GO:0051032 nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.1 0.4 GO:0047256 beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity(GO:0008457) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity(GO:0047256)
0.1 0.7 GO:0098639 collagen binding involved in cell-matrix adhesion(GO:0098639)
0.1 0.4 GO:0033300 dehydroascorbic acid transporter activity(GO:0033300)
0.1 0.6 GO:0043183 vascular endothelial growth factor receptor 1 binding(GO:0043183)
0.1 0.6 GO:0034431 endopolyphosphatase activity(GO:0000298) diphosphoinositol-polyphosphate diphosphatase activity(GO:0008486) bis(5'-adenosyl)-hexaphosphatase activity(GO:0034431) bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432) inositol diphosphate tetrakisphosphate diphosphatase activity(GO:0052840) inositol bisdiphosphate tetrakisphosphate diphosphatase activity(GO:0052841) inositol diphosphate pentakisphosphate diphosphatase activity(GO:0052842) inositol-1-diphosphate-2,3,4,5,6-pentakisphosphate diphosphatase activity(GO:0052843) inositol-3-diphosphate-1,2,4,5,6-pentakisphosphate diphosphatase activity(GO:0052844) inositol-5-diphosphate-1,2,3,4,6-pentakisphosphate diphosphatase activity(GO:0052845) inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 1-diphosphatase activity(GO:0052846) inositol-1,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity(GO:0052847) inositol-3,5-bisdiphosphate-2,3,4,6-tetrakisphosphate 5-diphosphatase activity(GO:0052848)
0.1 0.4 GO:0050119 N-acetylglucosamine deacetylase activity(GO:0050119)
0.1 0.3 GO:0030350 iron-responsive element binding(GO:0030350)
0.1 0.5 GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912)
0.1 0.3 GO:0035033 histone deacetylase regulator activity(GO:0035033)
0.1 1.4 GO:0004000 adenosine deaminase activity(GO:0004000)
0.1 0.6 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.1 0.7 GO:0043426 MRF binding(GO:0043426)
0.1 1.2 GO:0048407 platelet-derived growth factor binding(GO:0048407)
0.1 0.7 GO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083)
0.1 0.2 GO:0004119 cGMP-inhibited cyclic-nucleotide phosphodiesterase activity(GO:0004119)
0.1 0.3 GO:0034714 type III transforming growth factor beta receptor binding(GO:0034714)
0.1 0.2 GO:0098770 FBXO family protein binding(GO:0098770)
0.1 0.3 GO:0071209 U7 snRNA binding(GO:0071209)
0.1 0.3 GO:0051800 phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity(GO:0051800)
0.1 0.2 GO:0004157 dihydropyrimidinase activity(GO:0004157)
0.1 5.9 GO:0005201 extracellular matrix structural constituent(GO:0005201)
0.1 0.4 GO:0047238 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity(GO:0047238)
0.1 0.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.3 GO:0043120 tumor necrosis factor binding(GO:0043120)
0.0 0.1 GO:0005169 neurotrophin TRKB receptor binding(GO:0005169)
0.0 0.1 GO:0047275 glucosaminylgalactosylglucosylceramide beta-galactosyltransferase activity(GO:0047275)
0.0 0.6 GO:0035374 chondroitin sulfate binding(GO:0035374)
0.0 0.3 GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591)
0.0 0.7 GO:0004723 calcium-dependent protein serine/threonine phosphatase activity(GO:0004723)
0.0 0.5 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.0 GO:0099609 microtubule lateral binding(GO:0099609)
0.0 0.2 GO:0004800 thyroxine 5'-deiodinase activity(GO:0004800)
0.0 0.3 GO:0061649 ubiquitinated histone binding(GO:0061649)
0.0 0.2 GO:0004096 catalase activity(GO:0004096)
0.0 0.2 GO:0002114 interleukin-33 receptor activity(GO:0002114)
0.0 0.6 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.7 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068)
0.0 0.3 GO:0015349 thyroid hormone transmembrane transporter activity(GO:0015349)
0.0 0.8 GO:0035259 glucocorticoid receptor binding(GO:0035259)
0.0 0.6 GO:0046527 glucosyltransferase activity(GO:0046527)
0.0 0.2 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)
0.0 0.2 GO:0050816 phosphothreonine binding(GO:0050816)
0.0 0.2 GO:0016909 JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909)
0.0 0.2 GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005)
0.0 0.6 GO:0051400 BH domain binding(GO:0051400)
0.0 0.4 GO:0035612 AP-2 adaptor complex binding(GO:0035612)
0.0 0.5 GO:0015250 water channel activity(GO:0015250)
0.0 0.2 GO:0016778 diphosphotransferase activity(GO:0016778)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.1 GO:0004692 cGMP-dependent protein kinase activity(GO:0004692)
0.0 0.4 GO:0070679 inositol 1,4,5 trisphosphate binding(GO:0070679)
0.0 0.2 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.0 0.3 GO:0033592 RNA strand annealing activity(GO:0033592)
0.0 0.3 GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135)
0.0 0.2 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.0 0.3 GO:0055056 D-glucose transmembrane transporter activity(GO:0055056)
0.0 0.1 GO:0031752 D5 dopamine receptor binding(GO:0031752)
0.0 0.2 GO:0102337 fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.5 GO:0017049 GTP-Rho binding(GO:0017049)
0.0 0.6 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.3 GO:0042301 phosphate ion binding(GO:0042301)
0.0 0.9 GO:0051721 protein phosphatase 2A binding(GO:0051721)
0.0 0.3 GO:0004579 oligosaccharyl transferase activity(GO:0004576) dolichyl-diphosphooligosaccharide-protein glycotransferase activity(GO:0004579)
0.0 0.8 GO:0032452 histone demethylase activity(GO:0032452)
0.0 0.1 GO:0038049 transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049)
0.0 2.7 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.1 GO:0004947 bradykinin receptor activity(GO:0004947)
0.0 1.1 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.2 GO:0004726 non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0 0.2 GO:0038132 neuregulin binding(GO:0038132)
0.0 0.3 GO:0035256 G-protein coupled glutamate receptor binding(GO:0035256)
0.0 0.1 GO:0050509 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity(GO:0050509)
0.0 0.1 GO:0034046 poly(G) binding(GO:0034046)
0.0 0.3 GO:0005161 platelet-derived growth factor receptor binding(GO:0005161)
0.0 0.2 GO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0090631 pre-miRNA transporter activity(GO:0090631)
0.0 0.2 GO:0030368 interleukin-17 receptor activity(GO:0030368)
0.0 0.1 GO:0015439 heme-transporting ATPase activity(GO:0015439)
0.0 0.7 GO:0051959 dynein light intermediate chain binding(GO:0051959)
0.0 0.4 GO:0098641 cadherin binding involved in cell-cell adhesion(GO:0098641)
0.0 0.2 GO:0071253 connexin binding(GO:0071253)
0.0 0.2 GO:0034450 ubiquitin-ubiquitin ligase activity(GO:0034450)
0.0 0.1 GO:0005545 1-phosphatidylinositol binding(GO:0005545)
0.0 0.4 GO:0051428 peptide hormone receptor binding(GO:0051428)
0.0 0.8 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 0.2 GO:0043176 amine binding(GO:0043176) serotonin binding(GO:0051378)
0.0 0.0 GO:0098808 mRNA cap binding(GO:0098808)
0.0 0.0 GO:0003943 N-acetylgalactosamine-4-sulfatase activity(GO:0003943)
0.0 0.2 GO:0017162 aryl hydrocarbon receptor binding(GO:0017162)
0.0 0.3 GO:0050321 tau-protein kinase activity(GO:0050321)
0.0 0.2 GO:0003708 retinoic acid receptor activity(GO:0003708)
0.0 0.4 GO:0005031 tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.0 0.0 GO:0008502 melatonin receptor activity(GO:0008502)
0.0 0.2 GO:0001054 RNA polymerase I activity(GO:0001054)
0.0 0.3 GO:0070530 K63-linked polyubiquitin binding(GO:0070530)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 0.0 GO:0070326 very-low-density lipoprotein particle receptor binding(GO:0070326)
0.0 0.2 GO:0089720 caspase binding(GO:0089720)
0.0 0.5 GO:0030544 Hsp70 protein binding(GO:0030544)
0.0 0.4 GO:0004115 3',5'-cyclic-AMP phosphodiesterase activity(GO:0004115)
0.0 0.1 GO:0097016 L27 domain binding(GO:0097016)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 9.6 NABA COLLAGENS Genes encoding collagen proteins
0.0 1.1 PID INTEGRIN4 PATHWAY Alpha6 beta4 integrin-ligand interactions
0.0 0.9 PID S1P S1P3 PATHWAY S1P3 pathway
0.0 2.3 PID SYNDECAN 2 PATHWAY Syndecan-2-mediated signaling events
0.0 1.1 PID S1P S1P2 PATHWAY S1P2 pathway
0.0 0.9 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.0 0.8 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 2.3 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.0 0.6 SA PROGRAMMED CELL DEATH Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.
0.0 0.2 PID NFKAPPAB ATYPICAL PATHWAY Atypical NF-kappaB pathway
0.0 2.2 PID NOTCH PATHWAY Notch signaling pathway
0.0 0.9 PID IL2 STAT5 PATHWAY IL2 signaling events mediated by STAT5
0.0 0.7 PID EPO PATHWAY EPO signaling pathway
0.0 0.7 PID NECTIN PATHWAY Nectin adhesion pathway
0.0 0.7 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 1.3 PID BCR 5PATHWAY BCR signaling pathway
0.0 0.9 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.0 0.2 PID INTEGRIN1 PATHWAY Beta1 integrin cell surface interactions
0.0 0.4 PID ANTHRAX PATHWAY Cellular roles of Anthrax toxin
0.0 0.2 PID IL3 PATHWAY IL3-mediated signaling events
0.0 0.3 PID NFKAPPAB CANONICAL PATHWAY Canonical NF-kappaB pathway
0.0 0.4 PID WNT NONCANONICAL PATHWAY Noncanonical Wnt signaling pathway
0.0 0.2 PID IGF1 PATHWAY IGF1 pathway
0.0 0.6 PID ARF6 TRAFFICKING PATHWAY Arf6 trafficking events
0.0 0.3 PID PRL SIGNALING EVENTS PATHWAY Signaling events mediated by PRL
0.0 0.1 ST INTERFERON GAMMA PATHWAY Interferon gamma pathway.
0.0 0.4 PID PI3KCI AKT PATHWAY Class I PI3K signaling events mediated by Akt
0.0 0.3 PID PI3K PLC TRK PATHWAY Trk receptor signaling mediated by PI3K and PLC-gamma
0.0 0.6 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 10.0 REACTOME COLLAGEN FORMATION Genes involved in Collagen formation
0.1 1.8 REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS Genes involved in Bile salt and organic anion SLC transporters
0.1 0.8 REACTOME NEGATIVE REGULATION OF THE PI3K AKT NETWORK Genes involved in Negative regulation of the PI3K/AKT network
0.1 1.6 REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs)
0.1 1.4 REACTOME PURINE SALVAGE Genes involved in Purine salvage
0.1 0.9 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.0 0.8 REACTOME SHC1 EVENTS IN ERBB4 SIGNALING Genes involved in SHC1 events in ERBB4 signaling
0.0 0.9 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.0 1.0 REACTOME CRMPS IN SEMA3A SIGNALING Genes involved in CRMPs in Sema3A signaling
0.0 0.9 REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin
0.0 0.7 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.0 0.4 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.6 REACTOME SOS MEDIATED SIGNALLING Genes involved in SOS-mediated signalling
0.0 0.5 REACTOME PASSIVE TRANSPORT BY AQUAPORINS Genes involved in Passive Transport by Aquaporins
0.0 0.4 REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS Genes involved in Elevation of cytosolic Ca2+ levels
0.0 0.3 REACTOME SIGNALLING TO P38 VIA RIT AND RIN Genes involved in Signalling to p38 via RIT and RIN
0.0 0.6 REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS Genes involved in Activation of the AP-1 family of transcription factors
0.0 0.4 REACTOME BASE FREE SUGAR PHOSPHATE REMOVAL VIA THE SINGLE NUCLEOTIDE REPLACEMENT PATHWAY Genes involved in Base-free sugar-phosphate removal via the single-nucleotide replacement pathway
0.0 0.0 REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY Genes involved in TRAF3-dependent IRF activation pathway
0.0 0.4 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0 0.7 REACTOME CHOLESTEROL BIOSYNTHESIS Genes involved in Cholesterol biosynthesis
0.0 0.8 REACTOME RNA POL I TRANSCRIPTION TERMINATION Genes involved in RNA Polymerase I Transcription Termination
0.0 0.4 REACTOME FACILITATIVE NA INDEPENDENT GLUCOSE TRANSPORTERS Genes involved in Facilitative Na+-independent glucose transporters
0.0 0.6 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.6