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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for AUGUGCC

Z-value: 0.16

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miRNA associated with seed AUGUGCC

NamemiRBASE accession
hsa-miR-455-5p
MIMAT0003150

Activity profile of AUGUGCC motif

Sorted Z-values of AUGUGCC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr4_-_149365827 0.31 ENST00000344721.4
NR3C2
nuclear receptor subfamily 3, group C, member 2
chr18_+_13218769 0.22 ENST00000399848.3
ENST00000361205.4
LDLRAD4
low density lipoprotein receptor class A domain containing 4
chr12_+_104458235 0.21 ENST00000229330.4
HCFC2
host cell factor C2
chr2_-_202316260 0.18 ENST00000332624.3
TRAK2
trafficking protein, kinesin binding 2
chr18_-_74207146 0.17 ENST00000443185.2
ZNF516
zinc finger protein 516
chr1_-_173991434 0.16 ENST00000367696.2
RC3H1
ring finger and CCCH-type domains 1
chr9_-_91793675 0.12 ENST00000375835.4
ENST00000375830.1
SHC3
SHC (Src homology 2 domain containing) transforming protein 3
chr1_-_217262969 0.10 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr17_+_57642886 0.09 ENST00000251241.4
ENST00000451169.2
ENST00000425628.3
ENST00000584385.1
ENST00000580030.1
DHX40
DEAH (Asp-Glu-Ala-His) box polypeptide 40
chr6_+_105404899 0.09 ENST00000345080.4
LIN28B
lin-28 homolog B (C. elegans)
chr2_-_213403565 0.09 ENST00000342788.4
ENST00000436443.1
ERBB4
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
chr14_-_39901618 0.08 ENST00000554932.1
ENST00000298097.7
FBXO33
F-box protein 33
chr10_-_94003003 0.08 ENST00000412050.4
CPEB3
cytoplasmic polyadenylation element binding protein 3
chr1_-_204329013 0.08 ENST00000272203.3
ENST00000414478.1
PLEKHA6
pleckstrin homology domain containing, family A member 6
chr10_+_20105157 0.08 ENST00000377242.3
ENST00000377252.4
PLXDC2
plexin domain containing 2
chr5_-_160973649 0.07 ENST00000393959.1
ENST00000517547.1
GABRB2
gamma-aminobutyric acid (GABA) A receptor, beta 2
chr14_-_90085458 0.07 ENST00000345097.4
ENST00000555855.1
ENST00000555353.1
FOXN3
forkhead box N3
chr8_+_61429416 0.07 ENST00000262646.7
ENST00000531289.1
RAB2A
RAB2A, member RAS oncogene family
chr12_-_94853716 0.06 ENST00000339839.5
ENST00000397809.5
ENST00000547575.1
CCDC41
coiled-coil domain containing 41
chr4_-_170924888 0.06 ENST00000502832.1
ENST00000393704.3
MFAP3L
microfibrillar-associated protein 3-like
chr12_-_49449107 0.06 ENST00000301067.7
KMT2D
lysine (K)-specific methyltransferase 2D
chr4_-_185395672 0.05 ENST00000393593.3
IRF2
interferon regulatory factor 2
chr6_+_87865262 0.05 ENST00000369577.3
ENST00000518845.1
ENST00000339907.4
ENST00000496806.2
ZNF292
zinc finger protein 292
chr17_-_27278304 0.05 ENST00000577226.1
PHF12
PHD finger protein 12
chr1_-_10856694 0.05 ENST00000377022.3
ENST00000344008.5
CASZ1
castor zinc finger 1
chr17_+_30264014 0.05 ENST00000322652.5
ENST00000580398.1
SUZ12
SUZ12 polycomb repressive complex 2 subunit
chr3_-_12705600 0.05 ENST00000542177.1
ENST00000442415.2
ENST00000251849.4
RAF1
v-raf-1 murine leukemia viral oncogene homolog 1
chr5_+_173315283 0.05 ENST00000265085.5
CPEB4
cytoplasmic polyadenylation element binding protein 4
chr5_-_175964366 0.05 ENST00000274811.4
RNF44
ring finger protein 44
chr20_+_19867150 0.04 ENST00000255006.6
RIN2
Ras and Rab interactor 2
chr2_-_157189180 0.04 ENST00000539077.1
ENST00000424077.1
ENST00000426264.1
ENST00000339562.4
ENST00000421709.1
NR4A2
nuclear receptor subfamily 4, group A, member 2
chr5_+_102455853 0.04 ENST00000515845.1
ENST00000321521.9
ENST00000507921.1
PPIP5K2
diphosphoinositol pentakisphosphate kinase 2
chr1_-_115053781 0.04 ENST00000358465.2
ENST00000369543.2
TRIM33
tripartite motif containing 33
chrX_+_44732757 0.04 ENST00000377967.4
ENST00000536777.1
ENST00000382899.4
ENST00000543216.1
KDM6A
lysine (K)-specific demethylase 6A
chr14_-_69619823 0.03 ENST00000341516.5
DCAF5
DDB1 and CUL4 associated factor 5
chr5_-_132073210 0.03 ENST00000378735.1
ENST00000378746.4
KIF3A
kinesin family member 3A
chr19_-_5978090 0.03 ENST00000592621.1
ENST00000034275.8
ENST00000591092.1
ENST00000591333.1
ENST00000590623.1
ENST00000439268.2
ENST00000587159.1
RANBP3
RAN binding protein 3
chr17_-_1420182 0.03 ENST00000421807.2
INPP5K
inositol polyphosphate-5-phosphatase K
chr3_+_62304712 0.03 ENST00000494481.1
C3orf14
chromosome 3 open reading frame 14
chr5_-_41510656 0.03 ENST00000377801.3
PLCXD3
phosphatidylinositol-specific phospholipase C, X domain containing 3
chr2_+_106361333 0.03 ENST00000233154.4
ENST00000451463.2
NCK2
NCK adaptor protein 2
chr6_-_146135880 0.03 ENST00000237281.4
FBXO30
F-box protein 30
chr22_+_40573921 0.03 ENST00000454349.2
ENST00000335727.9
TNRC6B
trinucleotide repeat containing 6B
chr17_-_5389477 0.02 ENST00000572834.1
ENST00000570848.1
ENST00000571971.1
ENST00000158771.4
DERL2
derlin 2
chrX_+_40944871 0.02 ENST00000378308.2
ENST00000324545.8
USP9X
ubiquitin specific peptidase 9, X-linked
chr17_+_48796905 0.02 ENST00000505658.1
ENST00000393227.2
ENST00000240304.1
ENST00000311571.3
ENST00000505619.1
ENST00000544170.1
ENST00000510984.1
LUC7L3
LUC7-like 3 (S. cerevisiae)
chrX_+_12156582 0.02 ENST00000380682.1
FRMPD4
FERM and PDZ domain containing 4
chr8_+_75736761 0.02 ENST00000260113.2
PI15
peptidase inhibitor 15
chr4_+_62066941 0.02 ENST00000512091.2
LPHN3
latrophilin 3
chr2_-_152955537 0.02 ENST00000201943.5
ENST00000539935.1
CACNB4
calcium channel, voltage-dependent, beta 4 subunit
chr2_+_60983361 0.02 ENST00000238714.3
PAPOLG
poly(A) polymerase gamma
chr19_-_33166045 0.02 ENST00000586693.3
ENST00000587352.1
ENST00000586463.1
ENST00000306065.4
ANKRD27
ankyrin repeat domain 27 (VPS9 domain)
chr12_+_2162447 0.02 ENST00000335762.5
ENST00000399655.1
CACNA1C
calcium channel, voltage-dependent, L type, alpha 1C subunit
chr5_+_141488070 0.02 ENST00000253814.4
NDFIP1
Nedd4 family interacting protein 1
chr6_+_89790490 0.02 ENST00000336032.3
PNRC1
proline-rich nuclear receptor coactivator 1
chr1_+_212458834 0.01 ENST00000261461.2
PPP2R5A
protein phosphatase 2, regulatory subunit B', alpha
chr5_+_118407053 0.01 ENST00000311085.8
ENST00000539542.1
DMXL1
Dmx-like 1
chr11_+_9406169 0.01 ENST00000379719.3
ENST00000527431.1
IPO7
importin 7
chr9_-_74980113 0.01 ENST00000376962.5
ENST00000376960.4
ENST00000237937.3
ZFAND5
zinc finger, AN1-type domain 5
chr12_-_57824739 0.01 ENST00000347140.3
ENST00000402412.1
R3HDM2
R3H domain containing 2
chr6_-_99873145 0.01 ENST00000369239.5
ENST00000438806.1
PNISR
PNN-interacting serine/arginine-rich protein
chr3_+_31574189 0.01 ENST00000295770.2
STT3B
STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
chr7_+_65338230 0.01 ENST00000360768.3
VKORC1L1
vitamin K epoxide reductase complex, subunit 1-like 1
chr10_-_15762124 0.01 ENST00000378076.3
ITGA8
integrin, alpha 8
chr1_+_22889953 0.01 ENST00000374644.4
ENST00000166244.3
ENST00000538803.1
EPHA8
EPH receptor A8
chr12_+_12870055 0.01 ENST00000228872.4
CDKN1B
cyclin-dependent kinase inhibitor 1B (p27, Kip1)
chr1_+_193091080 0.01 ENST00000367435.3
CDC73
cell division cycle 73
chr20_-_43438912 0.01 ENST00000541604.2
ENST00000372851.3
RIMS4
regulating synaptic membrane exocytosis 4
chr12_+_94542459 0.01 ENST00000258526.4
PLXNC1
plexin C1
chr11_-_57092381 0.01 ENST00000358252.3
TNKS1BP1
tankyrase 1 binding protein 1, 182kDa
chr11_+_18720316 0.00 ENST00000280734.2
TMEM86A
transmembrane protein 86A
chr10_+_27793197 0.00 ENST00000356940.6
ENST00000535776.1
RAB18
RAB18, member RAS oncogene family
chr1_-_118472216 0.00 ENST00000369443.5
GDAP2
ganglioside induced differentiation associated protein 2
chr12_-_100536608 0.00 ENST00000356828.3
ENST00000279907.7
UHRF1BP1L
UHRF1 binding protein 1-like
chr4_+_41937131 0.00 ENST00000504986.1
ENST00000508448.1
ENST00000513702.1
ENST00000325094.5
TMEM33
transmembrane protein 33
chr13_-_50367057 0.00 ENST00000261667.3
KPNA3
karyopherin alpha 3 (importin alpha 4)
chr2_+_85198216 0.00 ENST00000456682.1
ENST00000409785.4
KCMF1
potassium channel modulatory factor 1
chr14_-_21737610 0.00 ENST00000320084.7
ENST00000449098.1
ENST00000336053.6
HNRNPC
heterogeneous nuclear ribonucleoprotein C (C1/C2)
chr10_+_112679301 0.00 ENST00000265277.5
ENST00000369452.4
SHOC2
soc-2 suppressor of clear homolog (C. elegans)
chr9_+_95087766 0.00 ENST00000375587.3
CENPP
centromere protein P
chr7_-_155604967 0.00 ENST00000297261.2
SHH
sonic hedgehog
chr4_+_7194247 0.00 ENST00000507866.2
SORCS2
sortilin-related VPS10 domain containing receptor 2
chr13_-_52027134 0.00 ENST00000311234.4
ENST00000425000.1
ENST00000463928.1
ENST00000442263.3
ENST00000398119.2
INTS6
integrator complex subunit 6

Network of associatons between targets according to the STRING database.

First level regulatory network of AUGUGCC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0098935 dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937)
0.0 0.1 GO:2000364 regulation of STAT protein import into nucleus(GO:2000364) positive regulation of STAT protein import into nucleus(GO:2000366)
0.0 0.1 GO:1900365 positive regulation of mRNA polyadenylation(GO:1900365)
0.0 0.2 GO:0061470 T follicular helper cell differentiation(GO:0061470)
0.0 0.2 GO:0010991 negative regulation of SMAD protein complex assembly(GO:0010991)
0.0 0.0 GO:0021986 epithalamus development(GO:0021538) habenula development(GO:0021986)
0.0 0.0 GO:0071557 histone H3-K27 demethylation(GO:0071557)
0.0 0.1 GO:0001555 oocyte growth(GO:0001555)
0.0 0.1 GO:0010587 miRNA catabolic process(GO:0010587)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0050682 AF-2 domain binding(GO:0050682)
0.0 0.0 GO:0071558 histone demethylase activity (H3-K27 specific)(GO:0071558)
0.0 0.1 GO:0005237 inhibitory extracellular ligand-gated ion channel activity(GO:0005237)