Project
Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
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Results for AUGUGCC
Z-value: 0.16
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miRNA associated with seed AUGUGCC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-455-5p
|
MIMAT0003150 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr4_-_149365827 Show fit | 0.31 |
ENST00000344721.4
|
nuclear receptor subfamily 3, group C, member 2 |
|
| chr18_+_13218769 Show fit | 0.22 |
ENST00000399848.3
ENST00000361205.4 |
low density lipoprotein receptor class A domain containing 4 |
|
| chr12_+_104458235 Show fit | 0.21 |
ENST00000229330.4
|
host cell factor C2 |
|
| chr2_-_202316260 Show fit | 0.18 |
ENST00000332624.3
|
trafficking protein, kinesin binding 2 |
|
| chr18_-_74207146 Show fit | 0.17 |
ENST00000443185.2
|
zinc finger protein 516 |
|
| chr1_-_173991434 Show fit | 0.16 |
ENST00000367696.2
|
ring finger and CCCH-type domains 1 |
|
| chr9_-_91793675 Show fit | 0.12 |
ENST00000375835.4
ENST00000375830.1 |
SHC (Src homology 2 domain containing) transforming protein 3 |
|
| chr1_-_217262969 Show fit | 0.10 |
ENST00000361525.3
|
estrogen-related receptor gamma |
|
| chr17_+_57642886 Show fit | 0.09 |
ENST00000251241.4
ENST00000451169.2 ENST00000425628.3 ENST00000584385.1 ENST00000580030.1 |
DEAH (Asp-Glu-Ala-His) box polypeptide 40 |
|
| chr6_+_105404899 Show fit | 0.09 |
ENST00000345080.4
|
lin-28 homolog B (C. elegans) |
Network of associatons between targets according to the STRING database.
First level regulatory network of AUGUGCC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0098935 | dendritic transport(GO:0098935) anterograde dendritic transport(GO:0098937) |
| 0.0 | 0.2 | GO:0061470 | T follicular helper cell differentiation(GO:0061470) |
| 0.0 | 0.2 | GO:0010991 | negative regulation of SMAD protein complex assembly(GO:0010991) |
| 0.0 | 0.1 | GO:2000364 | regulation of STAT protein import into nucleus(GO:2000364) positive regulation of STAT protein import into nucleus(GO:2000366) |
| 0.0 | 0.1 | GO:1900365 | positive regulation of mRNA polyadenylation(GO:1900365) |
| 0.0 | 0.1 | GO:0001555 | oocyte growth(GO:0001555) |
| 0.0 | 0.1 | GO:0010587 | miRNA catabolic process(GO:0010587) |
| 0.0 | 0.0 | GO:0021986 | epithalamus development(GO:0021538) habenula development(GO:0021986) |
| 0.0 | 0.0 | GO:0071557 | histone H3-K27 demethylation(GO:0071557) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0050682 | AF-2 domain binding(GO:0050682) |
| 0.0 | 0.1 | GO:0005237 | inhibitory extracellular ligand-gated ion channel activity(GO:0005237) |
| 0.0 | 0.0 | GO:0071558 | histone demethylase activity (H3-K27 specific)(GO:0071558) |