Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FOXI1 | hg19_v2_chr5_+_169532896_169532917 | 0.58 | 7.9e-04 | Click! |
FOXD3 | hg19_v2_chr1_+_63788730_63788730 | -0.52 | 3.2e-03 | Click! |
FOXF1 | hg19_v2_chr16_+_86544113_86544145 | -0.25 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_71551652 Show fit | 22.01 |
ENST00000546561.1
|
tetraspanin 8 |
|
chr12_-_25348007 Show fit | 15.39 |
ENST00000354189.5
ENST00000545133.1 ENST00000554347.1 ENST00000395987.3 ENST00000320267.9 ENST00000395990.2 ENST00000537577.1 |
cancer susceptibility candidate 1 |
|
chr4_+_165675197 Show fit | 10.12 |
ENST00000515485.1
|
RP11-294O2.2 |
|
chr11_-_108464465 Show fit | 9.19 |
ENST00000525344.1
|
exophilin 5 |
|
chr1_+_104159999 Show fit | 9.13 |
ENST00000414303.2
ENST00000423678.1 |
amylase, alpha 2A (pancreatic) |
|
chr20_+_9049682 Show fit | 8.76 |
ENST00000334005.3
ENST00000378473.3 |
phospholipase C, beta 4 |
|
chr11_+_27076764 Show fit | 8.75 |
ENST00000525090.1
|
butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 |
|
chr11_-_108464321 Show fit | 8.14 |
ENST00000265843.4
|
exophilin 5 |
|
chr3_-_167371740 Show fit | 8.12 |
ENST00000466760.1
ENST00000479765.1 |
WD repeat domain 49 |
|
chr13_+_36050881 Show fit | 7.89 |
ENST00000537702.1
|
neurobeachin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 30.1 | GO:1900047 | negative regulation of blood coagulation(GO:0030195) negative regulation of hemostasis(GO:1900047) |
0.8 | 18.7 | GO:0003334 | keratinocyte development(GO:0003334) |
1.3 | 14.2 | GO:0045329 | carnitine biosynthetic process(GO:0045329) |
0.6 | 12.5 | GO:0040015 | negative regulation of multicellular organism growth(GO:0040015) |
0.5 | 11.1 | GO:0006068 | ethanol catabolic process(GO:0006068) |
0.0 | 11.1 | GO:0006367 | transcription initiation from RNA polymerase II promoter(GO:0006367) |
0.1 | 10.5 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
1.3 | 9.1 | GO:0044245 | polysaccharide digestion(GO:0044245) |
0.5 | 8.6 | GO:1902260 | negative regulation of delayed rectifier potassium channel activity(GO:1902260) |
0.3 | 7.7 | GO:0072189 | ureter development(GO:0072189) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.6 | GO:0009986 | cell surface(GO:0009986) |
0.1 | 13.0 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.1 | 12.0 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.1 | 8.5 | GO:0033116 | endoplasmic reticulum-Golgi intermediate compartment membrane(GO:0033116) |
0.1 | 7.0 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
1.3 | 6.5 | GO:0005879 | axonemal microtubule(GO:0005879) |
0.1 | 6.3 | GO:0005930 | axoneme(GO:0005930) ciliary plasm(GO:0097014) |
0.1 | 5.9 | GO:0046658 | anchored component of plasma membrane(GO:0046658) |
0.6 | 5.7 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 5.4 | GO:0005814 | centriole(GO:0005814) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 23.3 | GO:0005178 | integrin binding(GO:0005178) |
3.6 | 14.2 | GO:0008336 | gamma-butyrobetaine dioxygenase activity(GO:0008336) |
0.1 | 14.2 | GO:0017137 | Rab GTPase binding(GO:0017137) |
1.6 | 11.2 | GO:0047894 | flavonol 3-sulfotransferase activity(GO:0047894) steroid sulfotransferase activity(GO:0050294) |
0.3 | 10.9 | GO:0004435 | phosphatidylinositol phospholipase C activity(GO:0004435) |
0.8 | 9.9 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
2.3 | 9.1 | GO:0016160 | amylase activity(GO:0016160) |
1.6 | 8.0 | GO:0047820 | D-glutamate cyclase activity(GO:0047820) |
2.2 | 6.5 | GO:0031862 | prostanoid receptor binding(GO:0031862) |
0.3 | 6.5 | GO:0070330 | aromatase activity(GO:0070330) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 17.0 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 11.9 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 7.9 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 5.2 | PID BMP PATHWAY | BMP receptor signaling |
0.1 | 5.1 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.1 | 4.1 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 4.1 | PID CDC42 PATHWAY | CDC42 signaling events |
0.0 | 4.1 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 3.9 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.1 | 3.9 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.2 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.4 | 11.1 | REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES | Genes involved in Cytosolic sulfonation of small molecules |
0.2 | 10.2 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
1.0 | 9.1 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.1 | 7.8 | REACTOME PLC BETA MEDIATED EVENTS | Genes involved in PLC beta mediated events |
0.1 | 7.6 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 5.5 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.1 | 5.0 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.1 | 4.8 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |
0.3 | 4.6 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |