Project
Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
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Results for GAUUGUC
Z-value: 0.82
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miRNA associated with seed GAUUGUC
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr19_+_5914213 Show fit | 6.09 |
ENST00000222125.5
ENST00000452990.2 ENST00000588865.1 |
calcyphosine |
|
| chr1_-_207119738 Show fit | 5.22 |
ENST00000356495.4
|
polymeric immunoglobulin receptor |
|
| chr6_+_17281573 Show fit | 4.62 |
ENST00000379052.5
|
RNA binding motif protein 24 |
|
| chr7_-_131241361 Show fit | 4.62 |
ENST00000378555.3
ENST00000322985.9 ENST00000541194.1 ENST00000537928.1 |
podocalyxin-like |
|
| chr4_+_75858290 Show fit | 4.00 |
ENST00000513238.1
|
prostate androgen-regulated mucin-like protein 1 |
|
| chr18_-_45663666 Show fit | 3.50 |
ENST00000535628.2
|
zinc finger and BTB domain containing 7C |
|
| chr5_+_50678921 Show fit | 2.38 |
ENST00000230658.7
|
ISL LIM homeobox 1 |
|
| chr1_+_244214577 Show fit | 2.09 |
ENST00000358704.4
|
zinc finger and BTB domain containing 18 |
|
| chr19_-_14316980 Show fit | 2.03 |
ENST00000361434.3
ENST00000340736.6 |
latrophilin 1 |
|
| chr7_+_3340989 Show fit | 1.99 |
ENST00000404826.2
ENST00000389531.3 |
sidekick cell adhesion molecule 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GAUUGUC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 5.2 | GO:0002415 | immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor(GO:0002415) |
| 1.2 | 4.6 | GO:0033634 | positive regulation of cell-cell adhesion mediated by integrin(GO:0033634) |
| 0.1 | 4.6 | GO:0010830 | regulation of myotube differentiation(GO:0010830) |
| 0.1 | 4.0 | GO:0051973 | positive regulation of telomerase activity(GO:0051973) |
| 0.3 | 3.5 | GO:1903025 | regulation of RNA polymerase II regulatory region sequence-specific DNA binding(GO:1903025) |
| 0.8 | 2.4 | GO:0048936 | visceral motor neuron differentiation(GO:0021524) peripheral nervous system neuron axonogenesis(GO:0048936) cardiac cell fate determination(GO:0060913) |
| 0.7 | 2.0 | GO:0090076 | relaxation of skeletal muscle(GO:0090076) |
| 0.1 | 2.0 | GO:0048148 | behavioral response to cocaine(GO:0048148) |
| 0.6 | 1.8 | GO:1901860 | positive regulation of mitochondrial DNA metabolic process(GO:1901860) |
| 0.3 | 1.8 | GO:0007352 | zygotic specification of dorsal/ventral axis(GO:0007352) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 5.2 | GO:0035577 | azurophil granule membrane(GO:0035577) |
| 0.5 | 4.6 | GO:0036056 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
| 0.0 | 2.4 | GO:0005790 | smooth endoplasmic reticulum(GO:0005790) |
| 0.1 | 2.3 | GO:0097440 | apical dendrite(GO:0097440) |
| 0.0 | 2.0 | GO:0043198 | dendritic shaft(GO:0043198) |
| 0.0 | 1.7 | GO:0030665 | clathrin-coated vesicle membrane(GO:0030665) |
| 0.1 | 1.4 | GO:0036157 | outer dynein arm(GO:0036157) |
| 0.0 | 1.4 | GO:0045171 | intercellular bridge(GO:0045171) |
| 0.0 | 1.3 | GO:0005720 | nuclear heterochromatin(GO:0005720) |
| 0.0 | 1.3 | GO:0016459 | myosin complex(GO:0016459) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 6.1 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
| 0.7 | 5.2 | GO:0019763 | immunoglobulin receptor activity(GO:0019763) |
| 0.1 | 2.6 | GO:1990841 | promoter-specific chromatin binding(GO:1990841) |
| 0.1 | 2.0 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
| 0.1 | 1.8 | GO:0042975 | peroxisome proliferator activated receptor binding(GO:0042975) |
| 0.4 | 1.6 | GO:0000822 | inositol hexakisphosphate binding(GO:0000822) |
| 0.3 | 1.4 | GO:0030292 | protein tyrosine kinase inhibitor activity(GO:0030292) |
| 0.2 | 1.4 | GO:0016403 | dimethylargininase activity(GO:0016403) |
| 0.1 | 1.4 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
| 0.0 | 1.3 | GO:0030165 | PDZ domain binding(GO:0030165) |
Gene overrepresentation in C2:CP category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 4.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
| 0.0 | 3.9 | PID IL4 2PATHWAY | IL4-mediated signaling events |
| 0.0 | 1.8 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
| 0.0 | 1.4 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
| 0.0 | 1.0 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
| 0.0 | 1.0 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
| 0.0 | 1.0 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
| 0.0 | 0.9 | PID AVB3 INTEGRIN PATHWAY | Integrins in angiogenesis |
| 0.0 | 0.8 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
| 0.0 | 0.7 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
Gene overrepresentation in C2:CP:REACTOME category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 2.4 | REACTOME SYNTHESIS SECRETION AND INACTIVATION OF GIP | Genes involved in Synthesis, Secretion, and Inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) |
| 0.1 | 2.3 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
| 0.0 | 2.0 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
| 0.0 | 1.4 | REACTOME SIGNALING BY FGFR1 FUSION MUTANTS | Genes involved in Signaling by FGFR1 fusion mutants |
| 0.0 | 1.4 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
| 0.0 | 1.2 | REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS | Genes involved in Golgi Associated Vesicle Biogenesis |
| 0.0 | 0.9 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
| 0.0 | 0.7 | REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX | Genes involved in CDC6 association with the ORC:origin complex |
| 0.0 | 0.7 | REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE | Genes involved in mRNA Decay by 5' to 3' Exoribonuclease |
| 0.0 | 0.7 | REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE | Genes involved in Synthesis of PIPs at the Golgi membrane |