Project
Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
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Results for GCCUGUC
Z-value: 0.12
Motif logo
miRNA associated with seed GCCUGUC
| Name | miRBASE accession |
|---|---|
|
hsa-miR-214-5p
|
MIMAT0004564 |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr3_-_197686847 Show fit | 0.22 |
ENST00000265239.6
|
IQ motif containing G |
|
| chr6_-_39197226 Show fit | 0.12 |
ENST00000359534.3
|
potassium channel, subfamily K, member 5 |
|
| chr1_+_245133062 Show fit | 0.08 |
ENST00000366523.1
|
EF-hand calcium binding domain 2 |
|
| chr12_-_56652111 Show fit | 0.08 |
ENST00000267116.7
|
ankyrin repeat domain 52 |
|
| chr3_+_3841108 Show fit | 0.08 |
ENST00000319331.3
|
leucine rich repeat neuronal 1 |
|
| chr6_+_17281573 Show fit | 0.07 |
ENST00000379052.5
|
RNA binding motif protein 24 |
|
| chr2_-_19558373 Show fit | 0.07 |
ENST00000272223.2
|
odd-skipped related transciption factor 1 |
|
| chr2_-_217560248 Show fit | 0.06 |
ENST00000233813.4
|
insulin-like growth factor binding protein 5 |
|
| chr1_+_210406121 Show fit | 0.05 |
ENST00000367012.3
|
SERTA domain containing 4 |
|
| chr2_+_191273052 Show fit | 0.04 |
ENST00000417958.1
ENST00000432036.1 ENST00000392328.1 |
major facilitator superfamily domain containing 6 |
Network of associatons between targets according to the STRING database.
First level regulatory network of GCCUGUC
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0007288 | sperm axoneme assembly(GO:0007288) |
| 0.0 | 0.1 | GO:0090094 | metanephric cap development(GO:0072185) metanephric cap morphogenesis(GO:0072186) metanephric cap mesenchymal cell proliferation involved in metanephros development(GO:0090094) |
| 0.0 | 0.1 | GO:1904204 | regulation of skeletal muscle hypertrophy(GO:1904204) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0002177 | manchette(GO:0002177) |