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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for GCCUGUC

Z-value: 0.12

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miRNA associated with seed GCCUGUC

NamemiRBASE accession
hsa-miR-214-5p
MIMAT0004564

Activity profile of GCCUGUC motif

Sorted Z-values of GCCUGUC motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr3_-_197686847 0.22 ENST00000265239.6
IQCG
IQ motif containing G
chr6_-_39197226 0.12 ENST00000359534.3
KCNK5
potassium channel, subfamily K, member 5
chr1_+_245133062 0.08 ENST00000366523.1
EFCAB2
EF-hand calcium binding domain 2
chr12_-_56652111 0.08 ENST00000267116.7
ANKRD52
ankyrin repeat domain 52
chr3_+_3841108 0.08 ENST00000319331.3
LRRN1
leucine rich repeat neuronal 1
chr6_+_17281573 0.07 ENST00000379052.5
RBM24
RNA binding motif protein 24
chr2_-_19558373 0.07 ENST00000272223.2
OSR1
odd-skipped related transciption factor 1
chr2_-_217560248 0.06 ENST00000233813.4
IGFBP5
insulin-like growth factor binding protein 5
chr1_+_210406121 0.05 ENST00000367012.3
SERTAD4
SERTA domain containing 4
chr2_+_191273052 0.04 ENST00000417958.1
ENST00000432036.1
ENST00000392328.1
MFSD6
major facilitator superfamily domain containing 6
chr6_+_4021554 0.04 ENST00000337659.6
PRPF4B
pre-mRNA processing factor 4B
chr16_+_54964740 0.04 ENST00000394636.4
IRX5
iroquois homeobox 5
chr5_-_66492562 0.04 ENST00000256447.4
CD180
CD180 molecule
chr3_-_114790179 0.04 ENST00000462705.1
ZBTB20
zinc finger and BTB domain containing 20
chr15_-_65715401 0.03 ENST00000352385.2
IGDCC4
immunoglobulin superfamily, DCC subclass, member 4
chr22_-_42466782 0.03 ENST00000396398.3
ENST00000403363.1
ENST00000402937.1
NAGA
N-acetylgalactosaminidase, alpha-
chr3_+_37493610 0.03 ENST00000264741.5
ITGA9
integrin, alpha 9
chr2_-_97535708 0.03 ENST00000305476.5
SEMA4C
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
chr7_-_130080977 0.03 ENST00000223208.5
CEP41
centrosomal protein 41kDa
chr11_+_118754475 0.03 ENST00000292174.4
CXCR5
chemokine (C-X-C motif) receptor 5
chr14_-_61116168 0.03 ENST00000247182.6
SIX1
SIX homeobox 1
chr11_+_35684288 0.03 ENST00000299413.5
TRIM44
tripartite motif containing 44
chr13_+_73632897 0.03 ENST00000377687.4
KLF5
Kruppel-like factor 5 (intestinal)
chr17_-_61523535 0.03 ENST00000584031.1
ENST00000392976.1
CYB561
cytochrome b561
chr11_-_57283159 0.03 ENST00000533263.1
ENST00000278426.3
SLC43A1
solute carrier family 43 (amino acid system L transporter), member 1
chr9_-_127533519 0.03 ENST00000487099.2
ENST00000344523.4
ENST00000373584.3
NR6A1
nuclear receptor subfamily 6, group A, member 1
chr3_+_137906109 0.03 ENST00000481646.1
ENST00000469044.1
ENST00000491704.1
ENST00000461600.1
ARMC8
armadillo repeat containing 8
chr5_+_167718604 0.03 ENST00000265293.4
WWC1
WW and C2 domain containing 1
chr11_+_45868957 0.02 ENST00000443527.2
CRY2
cryptochrome 2 (photolyase-like)
chr17_+_46184911 0.02 ENST00000580219.1
ENST00000452859.2
ENST00000393405.2
ENST00000439357.2
ENST00000359238.2
SNX11
sorting nexin 11
chr2_-_211036051 0.02 ENST00000418791.1
ENST00000452086.1
ENST00000281772.9
KANSL1L
KAT8 regulatory NSL complex subunit 1-like
chr18_+_46065393 0.02 ENST00000256413.3
CTIF
CBP80/20-dependent translation initiation factor
chr17_+_30264014 0.02 ENST00000322652.5
ENST00000580398.1
SUZ12
SUZ12 polycomb repressive complex 2 subunit
chr11_+_14665263 0.02 ENST00000282096.4
PDE3B
phosphodiesterase 3B, cGMP-inhibited
chr12_-_45269430 0.02 ENST00000395487.2
NELL2
NEL-like 2 (chicken)
chr1_-_203055129 0.02 ENST00000241651.4
MYOG
myogenin (myogenic factor 4)
chr2_+_36582857 0.02 ENST00000280527.2
CRIM1
cysteine rich transmembrane BMP regulator 1 (chordin-like)
chr11_-_118305921 0.02 ENST00000532619.1
RP11-770J1.4
RP11-770J1.4
chrX_+_49644470 0.02 ENST00000508866.2
USP27X
ubiquitin specific peptidase 27, X-linked
chr1_+_205012293 0.01 ENST00000331830.4
CNTN2
contactin 2 (axonal)
chr5_-_146833485 0.01 ENST00000398514.3
DPYSL3
dihydropyrimidinase-like 3
chr8_-_71316021 0.01 ENST00000452400.2
NCOA2
nuclear receptor coactivator 2
chr7_-_27239703 0.01 ENST00000222753.4
HOXA13
homeobox A13
chr2_-_197457335 0.01 ENST00000260983.3
HECW2
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
chr17_+_2240775 0.01 ENST00000268989.3
ENST00000426855.2
SGSM2
small G protein signaling modulator 2
chr22_-_42828375 0.01 ENST00000329021.5
NFAM1
NFAT activating protein with ITAM motif 1
chr17_-_72919317 0.01 ENST00000319642.1
USH1G
Usher syndrome 1G (autosomal recessive)
chr8_-_103668114 0.01 ENST00000285407.6
KLF10
Kruppel-like factor 10
chr10_-_71892555 0.01 ENST00000307864.1
AIFM2
apoptosis-inducing factor, mitochondrion-associated, 2
chr17_-_39890893 0.01 ENST00000393939.2
ENST00000347901.4
ENST00000341193.5
ENST00000310778.5
HAP1
huntingtin-associated protein 1
chr14_-_99947168 0.01 ENST00000331768.5
SETD3
SET domain containing 3
chr11_-_62572901 0.01 ENST00000439713.2
ENST00000531131.1
ENST00000530875.1
ENST00000531709.2
ENST00000294172.2
NXF1
nuclear RNA export factor 1
chr1_+_145524891 0.01 ENST00000369304.3
ITGA10
integrin, alpha 10
chr5_+_167181917 0.01 ENST00000519204.1
TENM2
teneurin transmembrane protein 2
chr1_+_36348790 0.01 ENST00000373204.4
AGO1
argonaute RISC catalytic component 1
chr7_-_35077653 0.01 ENST00000310974.4
DPY19L1
dpy-19-like 1 (C. elegans)
chrX_-_53449593 0.01 ENST00000375340.6
ENST00000322213.4
SMC1A
structural maintenance of chromosomes 1A
chr10_-_43903217 0.01 ENST00000357065.4
HNRNPF
heterogeneous nuclear ribonucleoprotein F
chr3_-_9291063 0.01 ENST00000383836.3
SRGAP3
SLIT-ROBO Rho GTPase activating protein 3
chr10_+_101088836 0.01 ENST00000356713.4
CNNM1
cyclin M1
chr11_-_82782861 0.01 ENST00000524635.1
ENST00000526205.1
ENST00000527633.1
ENST00000533486.1
ENST00000533276.2
RAB30
RAB30, member RAS oncogene family
chr9_-_117568365 0.01 ENST00000374045.4
TNFSF15
tumor necrosis factor (ligand) superfamily, member 15
chr16_+_29789561 0.01 ENST00000400752.4
ZG16
zymogen granule protein 16
chr20_+_34894247 0.01 ENST00000373913.3
DLGAP4
discs, large (Drosophila) homolog-associated protein 4
chr22_-_50746027 0.01 ENST00000425954.1
ENST00000449103.1
PLXNB2
plexin B2
chr17_-_1465924 0.01 ENST00000573231.1
ENST00000576722.1
ENST00000576761.1
ENST00000576010.2
ENST00000313486.7
ENST00000539476.1
PITPNA
phosphatidylinositol transfer protein, alpha
chr6_+_21593972 0.01 ENST00000244745.1
ENST00000543472.1
SOX4
SRY (sex determining region Y)-box 4
chr12_-_111021110 0.01 ENST00000354300.3
PPTC7
PTC7 protein phosphatase homolog (S. cerevisiae)
chr12_-_56583332 0.01 ENST00000347471.4
ENST00000267064.4
ENST00000394023.3
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr3_-_125094093 0.01 ENST00000484491.1
ENST00000492394.1
ENST00000471196.1
ENST00000468369.1
ENST00000544464.1
ENST00000485866.1
ENST00000360647.4
ZNF148
zinc finger protein 148
chr5_-_137090028 0.01 ENST00000314940.4
HNRNPA0
heterogeneous nuclear ribonucleoprotein A0
chr5_+_95187934 0.01 ENST00000357880.3
ENST00000436592.1
C5orf27
chromosome 5 open reading frame 27
chr1_-_23857698 0.01 ENST00000361729.2
E2F2
E2F transcription factor 2
chr2_+_25015968 0.01 ENST00000380834.2
ENST00000473706.1
CENPO
centromere protein O
chr14_+_60715928 0.00 ENST00000395076.4
PPM1A
protein phosphatase, Mg2+/Mn2+ dependent, 1A
chr15_+_92937058 0.00 ENST00000268164.3
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
chr12_-_54673871 0.00 ENST00000209875.4
CBX5
chromobox homolog 5
chr7_-_127983877 0.00 ENST00000415472.2
ENST00000478061.1
ENST00000223073.2
ENST00000459726.1
RBM28
RNA binding motif protein 28
chr6_+_44187242 0.00 ENST00000393844.1
SLC29A1
solute carrier family 29 (equilibrative nucleoside transporter), member 1
chr11_+_48002076 0.00 ENST00000418331.2
ENST00000440289.2
PTPRJ
protein tyrosine phosphatase, receptor type, J
chr19_+_41768401 0.00 ENST00000352456.3
ENST00000595018.1
ENST00000597725.1
HNRNPUL1
heterogeneous nuclear ribonucleoprotein U-like 1
chr6_-_75994536 0.00 ENST00000475111.2
ENST00000230461.6
TMEM30A
transmembrane protein 30A
chr1_+_117602925 0.00 ENST00000369466.4
TTF2
transcription termination factor, RNA polymerase II
chr9_-_74980113 0.00 ENST00000376962.5
ENST00000376960.4
ENST00000237937.3
ZFAND5
zinc finger, AN1-type domain 5
chr20_+_10199468 0.00 ENST00000254976.2
ENST00000304886.2
SNAP25
synaptosomal-associated protein, 25kDa
chr1_-_55230165 0.00 ENST00000371279.3
PARS2
prolyl-tRNA synthetase 2, mitochondrial (putative)
chrX_+_117861535 0.00 ENST00000371666.3
ENST00000371642.1
IL13RA1
interleukin 13 receptor, alpha 1
chr11_-_6704513 0.00 ENST00000532203.1
ENST00000288937.6
MRPL17
mitochondrial ribosomal protein L17
chr3_+_32859510 0.00 ENST00000383763.5
TRIM71
tripartite motif containing 71, E3 ubiquitin protein ligase
chr19_+_30433110 0.00 ENST00000542441.2
ENST00000392271.1
URI1
URI1, prefoldin-like chaperone

Network of associatons between targets according to the STRING database.

First level regulatory network of GCCUGUC

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0090094 metanephric cap development(GO:0072185) metanephric cap morphogenesis(GO:0072186) metanephric cap mesenchymal cell proliferation involved in metanephros development(GO:0090094)
0.0 0.2 GO:0007288 sperm axoneme assembly(GO:0007288)
0.0 0.1 GO:1904204 regulation of skeletal muscle hypertrophy(GO:1904204)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0002177 manchette(GO:0002177)