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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for HOXD9

Z-value: 0.63

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Transcription factors associated with HOXD9

Gene Symbol Gene ID Gene Info
HOXD9
ENSG00000128709.10 homeobox D9

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HOXD9hg19_v2_chr2_+_176987088_176987088-0.057.9e-01Click!

Activity profile of HOXD9 motif

Sorted Z-values of HOXD9 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_197036364 1.99 ENST00000367412.1
F13B
coagulation factor XIII, B polypeptide
chr17_+_68071389 1.66 ENST00000283936.1
ENST00000392671.1
KCNJ16
potassium inwardly-rectifying channel, subfamily J, member 16
chr17_+_68071458 1.63 ENST00000589377.1
KCNJ16
potassium inwardly-rectifying channel, subfamily J, member 16
chr3_-_112564797 1.40 ENST00000398214.1
ENST00000448932.1
CD200R1L
CD200 receptor 1-like
chr7_-_16921601 1.17 ENST00000402239.3
ENST00000310398.2
ENST00000414935.1
AGR3
anterior gradient 3
chr5_+_68860949 1.15 ENST00000507595.1
GTF2H2C
general transcription factor IIH, polypeptide 2C
chr10_-_71169031 1.09 ENST00000373307.1
TACR2
tachykinin receptor 2
chr6_-_52774464 1.02 ENST00000370968.1
ENST00000211122.3
GSTA3
glutathione S-transferase alpha 3
chr2_-_158345462 1.00 ENST00000439355.1
ENST00000540637.1
CYTIP
cytohesin 1 interacting protein
chr17_-_29641084 0.95 ENST00000544462.1
EVI2B
ecotropic viral integration site 2B
chr2_-_231989808 0.92 ENST00000258400.3
HTR2B
5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
chr22_+_23487513 0.91 ENST00000263116.2
ENST00000341989.4
RAB36
RAB36, member RAS oncogene family
chr4_+_71108300 0.90 ENST00000304954.3
CSN3
casein kappa
chr1_+_38022513 0.89 ENST00000296218.7
DNALI1
dynein, axonemal, light intermediate chain 1
chr5_+_94727048 0.89 ENST00000283357.5
FAM81B
family with sequence similarity 81, member B
chr9_-_39239171 0.88 ENST00000358144.2
CNTNAP3
contactin associated protein-like 3
chr6_+_32812568 0.86 ENST00000414474.1
PSMB9
proteasome (prosome, macropain) subunit, beta type, 9
chr4_-_110723194 0.86 ENST00000394635.3
CFI
complement factor I
chr12_+_15125954 0.82 ENST00000266395.2
PDE6H
phosphodiesterase 6H, cGMP-specific, cone, gamma
chr6_-_32634425 0.80 ENST00000399082.3
ENST00000399079.3
ENST00000374943.4
ENST00000434651.2
HLA-DQB1
major histocompatibility complex, class II, DQ beta 1
chr2_+_143886877 0.79 ENST00000295095.6
ARHGAP15
Rho GTPase activating protein 15
chr17_+_9479944 0.79 ENST00000396219.3
ENST00000352665.5
WDR16
WD repeat domain 16
chr1_+_240177627 0.77 ENST00000447095.1
FMN2
formin 2
chr16_-_20556492 0.76 ENST00000568098.1
ACSM2B
acyl-CoA synthetase medium-chain family member 2B
chr9_-_138391692 0.75 ENST00000429260.2
C9orf116
chromosome 9 open reading frame 116
chr3_+_94657118 0.74 ENST00000466089.1
ENST00000470465.1
LINC00879
long intergenic non-protein coding RNA 879
chr9_+_12693336 0.73 ENST00000381137.2
ENST00000388918.5
TYRP1
tyrosinase-related protein 1
chr7_-_122339162 0.73 ENST00000340112.2
RNF133
ring finger protein 133
chr3_+_94657086 0.72 ENST00000463200.1
LINC00879
long intergenic non-protein coding RNA 879
chr8_-_10512569 0.70 ENST00000382483.3
RP1L1
retinitis pigmentosa 1-like 1
chr2_+_133874577 0.69 ENST00000596384.1
AC011755.1
HCG2006742; Protein LOC100996685
chr11_-_5255861 0.69 ENST00000380299.3
HBD
hemoglobin, delta
chr5_-_41261540 0.67 ENST00000263413.3
C6
complement component 6
chr2_-_118943930 0.63 ENST00000449075.1
ENST00000414886.1
ENST00000449819.1
AC093901.1
AC093901.1
chr6_+_29274403 0.63 ENST00000377160.2
OR14J1
olfactory receptor, family 14, subfamily J, member 1
chr17_-_54893250 0.61 ENST00000397862.2
C17orf67
chromosome 17 open reading frame 67
chr19_-_56826157 0.61 ENST00000592509.1
ENST00000592679.1
ENST00000588442.1
ENST00000593106.1
ENST00000587492.1
ENST00000254165.3
ZSCAN5A
zinc finger and SCAN domain containing 5A
chr3_+_2933893 0.61 ENST00000397459.2
CNTN4
contactin 4
chr12_+_119772502 0.55 ENST00000536742.1
ENST00000327554.2
CCDC60
coiled-coil domain containing 60
chr11_-_102401469 0.52 ENST00000260227.4
MMP7
matrix metallopeptidase 7 (matrilysin, uterine)
chr1_+_104615595 0.50 ENST00000418362.1
RP11-364B6.1
RP11-364B6.1
chr3_+_195413160 0.48 ENST00000599448.1
LINC00969
long intergenic non-protein coding RNA 969
chr12_-_90049828 0.48 ENST00000261173.2
ENST00000348959.3
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1
chr3_+_111393501 0.48 ENST00000393934.3
PLCXD2
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr17_+_60447579 0.47 ENST00000450662.2
EFCAB3
EF-hand calcium binding domain 3
chr12_-_90049878 0.46 ENST00000359142.3
ATP2B1
ATPase, Ca++ transporting, plasma membrane 1
chr17_+_7155819 0.46 ENST00000570322.1
ENST00000576496.1
ENST00000574841.2
ELP5
elongator acetyltransferase complex subunit 5
chr19_+_55014085 0.43 ENST00000351841.2
LAIR2
leukocyte-associated immunoglobulin-like receptor 2
chr19_+_55014013 0.43 ENST00000301202.2
LAIR2
leukocyte-associated immunoglobulin-like receptor 2
chr12_-_9268707 0.41 ENST00000318602.7
A2M
alpha-2-macroglobulin
chr14_+_57671888 0.41 ENST00000391612.1
AL391152.1
AL391152.1
chr7_-_50633078 0.41 ENST00000444124.2
DDC
dopa decarboxylase (aromatic L-amino acid decarboxylase)
chr14_+_62462541 0.41 ENST00000430451.2
SYT16
synaptotagmin XVI
chrX_+_36246735 0.39 ENST00000378653.3
CXorf30
chromosome X open reading frame 30
chr1_+_196857144 0.39 ENST00000367416.2
ENST00000251424.4
ENST00000367418.2
CFHR4
complement factor H-related 4
chr1_-_48937838 0.39 ENST00000371847.3
SPATA6
spermatogenesis associated 6
chr12_-_11463353 0.38 ENST00000279575.1
ENST00000535904.1
ENST00000445719.2
PRB4
proline-rich protein BstNI subfamily 4
chr4_-_150736962 0.37 ENST00000502345.1
ENST00000510975.1
ENST00000511993.1
RP11-526A4.1
RP11-526A4.1
chr15_+_66797627 0.37 ENST00000565627.1
ENST00000564179.1
ZWILCH
zwilch kinetochore protein
chr18_-_74728998 0.36 ENST00000359645.3
ENST00000397875.3
ENST00000397869.3
ENST00000578193.1
ENST00000578873.1
ENST00000397866.4
ENST00000528160.1
ENST00000527041.1
ENST00000526111.1
ENST00000397865.5
ENST00000382582.3
MBP
myelin basic protein
chr15_+_76352178 0.35 ENST00000388942.3
C15orf27
chromosome 15 open reading frame 27
chr16_+_21689835 0.35 ENST00000286149.4
ENST00000388958.3
OTOA
otoancorin
chr7_-_80141328 0.34 ENST00000398291.3
GNAT3
guanine nucleotide binding protein, alpha transducing 3
chr3_+_63428982 0.34 ENST00000479198.1
ENST00000460711.1
ENST00000465156.1
SYNPR
synaptoporin
chr3_+_63428752 0.34 ENST00000295894.5
SYNPR
synaptoporin
chr11_+_112047087 0.34 ENST00000526088.1
ENST00000532593.1
ENST00000531169.1
BCO2
beta-carotene oxygenase 2
chr15_+_66797455 0.34 ENST00000446801.2
ZWILCH
zwilch kinetochore protein
chr3_-_38835501 0.34 ENST00000449082.2
SCN10A
sodium channel, voltage-gated, type X, alpha subunit
chrX_+_36254051 0.33 ENST00000378657.4
CXorf30
chromosome X open reading frame 30
chr4_-_168155730 0.33 ENST00000502330.1
ENST00000357154.3
SPOCK3
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
chr22_+_30477000 0.33 ENST00000403975.1
HORMAD2
HORMA domain containing 2
chr5_+_61874562 0.33 ENST00000334994.5
ENST00000409534.1
LRRC70
IPO11
leucine rich repeat containing 70
importin 11
chr8_-_26724784 0.32 ENST00000380573.3
ADRA1A
adrenoceptor alpha 1A
chr10_+_115511213 0.31 ENST00000361048.1
PLEKHS1
pleckstrin homology domain containing, family S member 1
chr6_-_132967142 0.29 ENST00000275216.1
TAAR1
trace amine associated receptor 1
chrX_-_130423200 0.29 ENST00000361420.3
IGSF1
immunoglobulin superfamily, member 1
chr2_-_188312971 0.28 ENST00000410068.1
ENST00000447403.1
ENST00000410102.1
CALCRL
calcitonin receptor-like
chrX_-_110513703 0.28 ENST00000324068.1
CAPN6
calpain 6
chr9_-_215744 0.28 ENST00000382387.2
C9orf66
chromosome 9 open reading frame 66
chr14_+_65878565 0.28 ENST00000556518.1
ENST00000557164.1
FUT8
fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
chr6_+_131958436 0.28 ENST00000357639.3
ENST00000543135.1
ENST00000427148.2
ENST00000358229.5
ENPP3
ectonucleotide pyrophosphatase/phosphodiesterase 3
chr10_-_13523073 0.27 ENST00000440282.1
BEND7
BEN domain containing 7
chr6_+_46761118 0.27 ENST00000230588.4
MEP1A
meprin A, alpha (PABA peptide hydrolase)
chr12_+_75728419 0.27 ENST00000378695.4
ENST00000312442.2
GLIPR1L1
GLI pathogenesis-related 1 like 1
chr1_+_109255279 0.27 ENST00000370017.3
FNDC7
fibronectin type III domain containing 7
chr6_-_49681235 0.26 ENST00000339139.4
CRISP2
cysteine-rich secretory protein 2
chr2_-_179567206 0.26 ENST00000414766.1
TTN
titin
chr6_+_6588316 0.26 ENST00000379953.2
LY86
lymphocyte antigen 86
chr1_-_100643765 0.26 ENST00000370137.1
ENST00000370138.1
ENST00000342895.3
LRRC39
leucine rich repeat containing 39
chrX_-_15332665 0.26 ENST00000537676.1
ENST00000344384.4
ASB11
ankyrin repeat and SOCS box containing 11
chr4_-_168155577 0.25 ENST00000541354.1
ENST00000509854.1
ENST00000512681.1
ENST00000421836.2
ENST00000510741.1
ENST00000510403.1
SPOCK3
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
chr4_+_175839551 0.25 ENST00000404450.4
ENST00000514159.1
ADAM29
ADAM metallopeptidase domain 29
chr1_-_236046872 0.23 ENST00000536965.1
LYST
lysosomal trafficking regulator
chr7_+_117864708 0.23 ENST00000357099.4
ENST00000265224.4
ENST00000486422.1
ENST00000417525.1
ANKRD7
ankyrin repeat domain 7
chr20_-_29978383 0.22 ENST00000339144.3
ENST00000376321.3
DEFB119
defensin, beta 119
chr1_-_39339777 0.22 ENST00000397572.2
MYCBP
MYC binding protein
chr6_-_39399087 0.20 ENST00000229913.5
ENST00000541946.1
ENST00000394362.1
KIF6
kinesin family member 6
chr11_-_104972158 0.20 ENST00000598974.1
ENST00000593315.1
ENST00000594519.1
ENST00000415981.2
ENST00000525374.1
ENST00000375707.1
CASP1
CARD16
CARD17
caspase 1, apoptosis-related cysteine peptidase
caspase recruitment domain family, member 16
caspase recruitment domain family, member 17
chr11_+_49050504 0.19 ENST00000332682.7
TRIM49B
tripartite motif containing 49B
chr2_+_109237717 0.19 ENST00000409441.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr22_+_22749343 0.19 ENST00000390298.2
IGLV7-43
immunoglobulin lambda variable 7-43
chr14_+_23654525 0.19 ENST00000399910.1
ENST00000492621.1
C14orf164
chromosome 14 open reading frame 164
chr2_+_25015968 0.19 ENST00000380834.2
ENST00000473706.1
CENPO
centromere protein O
chrX_-_130423240 0.19 ENST00000370910.1
ENST00000370901.4
IGSF1
immunoglobulin superfamily, member 1
chr4_+_25915822 0.19 ENST00000506197.2
SMIM20
small integral membrane protein 20
chr1_-_165414414 0.18 ENST00000359842.5
RXRG
retinoid X receptor, gamma
chr8_-_22785404 0.18 ENST00000256404.6
PEBP4
phosphatidylethanolamine-binding protein 4
chr1_-_48937821 0.18 ENST00000396199.3
SPATA6
spermatogenesis associated 6
chr8_+_86089460 0.17 ENST00000418930.2
E2F5
E2F transcription factor 5, p130-binding
chr8_+_86089619 0.17 ENST00000256117.5
ENST00000416274.2
E2F5
E2F transcription factor 5, p130-binding
chr6_+_31021225 0.17 ENST00000565192.1
ENST00000562344.1
HCG22
HLA complex group 22
chr10_+_104613980 0.17 ENST00000339834.5
C10orf32
chromosome 10 open reading frame 32
chr10_+_104614008 0.17 ENST00000369883.3
C10orf32
chromosome 10 open reading frame 32
chr11_+_92085262 0.17 ENST00000298047.6
ENST00000409404.2
ENST00000541502.1
FAT3
FAT atypical cadherin 3
chr12_+_58176525 0.17 ENST00000543727.1
ENST00000540550.1
ENST00000323833.8
ENST00000350762.5
ENST00000550559.1
ENST00000548851.1
ENST00000434359.1
ENST00000457189.1
TSFM
Ts translation elongation factor, mitochondrial
chr11_-_16430399 0.15 ENST00000528252.1
SOX6
SRY (sex determining region Y)-box 6
chr11_+_123986069 0.15 ENST00000456829.2
ENST00000361352.5
ENST00000449321.1
ENST00000392748.1
ENST00000360334.4
ENST00000392744.4
VWA5A
von Willebrand factor A domain containing 5A
chr15_-_90222610 0.15 ENST00000300055.5
PLIN1
perilipin 1
chr4_-_168155700 0.15 ENST00000357545.4
ENST00000512648.1
SPOCK3
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
chr16_-_18887627 0.15 ENST00000563235.1
SMG1
SMG1 phosphatidylinositol 3-kinase-related kinase
chrX_+_99839799 0.15 ENST00000373031.4
TNMD
tenomodulin
chr15_-_90222642 0.15 ENST00000430628.2
PLIN1
perilipin 1
chr3_+_158991025 0.15 ENST00000337808.6
IQCJ-SCHIP1
IQCJ-SCHIP1 readthrough
chrX_-_130423386 0.15 ENST00000370903.3
IGSF1
immunoglobulin superfamily, member 1
chr3_-_167191814 0.14 ENST00000466903.1
ENST00000264677.4
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr6_+_1312675 0.14 ENST00000296839.2
FOXQ1
forkhead box Q1
chr11_+_12115543 0.14 ENST00000537344.1
ENST00000532179.1
ENST00000526065.1
MICAL2
microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7_-_5998714 0.13 ENST00000539903.1
RSPH10B
radial spoke head 10 homolog B (Chlamydomonas)
chr6_+_13272904 0.13 ENST00000379335.3
ENST00000379329.1
PHACTR1
phosphatase and actin regulator 1
chr8_-_20040638 0.13 ENST00000519026.1
ENST00000276373.5
ENST00000440926.1
ENST00000437980.1
SLC18A1
solute carrier family 18 (vesicular monoamine transporter), member 1
chr11_-_104905840 0.13 ENST00000526568.1
ENST00000393136.4
ENST00000531166.1
ENST00000534497.1
ENST00000527979.1
ENST00000446369.1
ENST00000353247.5
ENST00000528974.1
ENST00000533400.1
ENST00000525825.1
ENST00000436863.3
CASP1
caspase 1, apoptosis-related cysteine peptidase
chrX_+_135730297 0.13 ENST00000370629.2
CD40LG
CD40 ligand
chrX_+_135730373 0.13 ENST00000370628.2
CD40LG
CD40 ligand
chr14_+_81421355 0.13 ENST00000541158.2
TSHR
thyroid stimulating hormone receptor
chr2_-_163695128 0.12 ENST00000332142.5
KCNH7
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr9_-_114090713 0.12 ENST00000302681.1
ENST00000374428.1
OR2K2
olfactory receptor, family 2, subfamily K, member 2
chr1_-_67266939 0.12 ENST00000304526.2
INSL5
insulin-like 5
chr10_-_115614127 0.12 ENST00000369305.1
DCLRE1A
DNA cross-link repair 1A
chr1_+_197881592 0.12 ENST00000367391.1
ENST00000367390.3
LHX9
LIM homeobox 9
chr19_+_54619125 0.12 ENST00000445811.1
ENST00000419967.1
ENST00000445124.1
ENST00000447810.1
PRPF31
pre-mRNA processing factor 31
chr9_-_21228221 0.12 ENST00000413767.2
IFNA17
interferon, alpha 17
chr4_+_71263599 0.11 ENST00000399575.2
PROL1
proline rich, lacrimal 1
chr10_+_115614370 0.11 ENST00000369301.3
NHLRC2
NHL repeat containing 2
chr9_-_123812542 0.11 ENST00000223642.1
C5
complement component 5
chr10_+_5406935 0.11 ENST00000380433.3
UCN3
urocortin 3
chr1_-_241799232 0.11 ENST00000366553.1
CHML
choroideremia-like (Rab escort protein 2)
chr1_+_78383813 0.11 ENST00000342754.5
NEXN
nexilin (F actin binding protein)
chr2_+_109223595 0.11 ENST00000410093.1
LIMS1
LIM and senescent cell antigen-like domains 1
chr5_+_147582387 0.11 ENST00000325630.2
SPINK6
serine peptidase inhibitor, Kazal type 6
chr8_-_86253888 0.11 ENST00000522389.1
ENST00000432364.2
ENST00000517618.1
CA1
carbonic anhydrase I
chr8_-_80942061 0.11 ENST00000519386.1
MRPS28
mitochondrial ribosomal protein S28
chrX_+_36053908 0.11 ENST00000378660.2
CHDC2
calponin homology domain containing 2
chr22_-_32651326 0.10 ENST00000266086.4
SLC5A4
solute carrier family 5 (glucose activated ion channel), member 4
chr5_-_138775177 0.10 ENST00000302060.5
DNAJC18
DnaJ (Hsp40) homolog, subfamily C, member 18
chr2_-_191115229 0.10 ENST00000409820.2
ENST00000410045.1
HIBCH
3-hydroxyisobutyryl-CoA hydrolase
chr12_+_19358228 0.10 ENST00000424268.1
ENST00000543806.1
PLEKHA5
pleckstrin homology domain containing, family A member 5
chr6_-_28220002 0.10 ENST00000377294.2
ZKSCAN4
zinc finger with KRAB and SCAN domains 4
chr3_+_178276488 0.10 ENST00000432997.1
ENST00000455865.1
KCNMB2
potassium large conductance calcium-activated channel, subfamily M, beta member 2
chr20_-_35890211 0.09 ENST00000373614.2
GHRH
growth hormone releasing hormone
chr17_+_75181292 0.09 ENST00000431431.2
SEC14L1
SEC14-like 1 (S. cerevisiae)
chr12_-_88974236 0.09 ENST00000228280.5
ENST00000552044.1
ENST00000357116.4
KITLG
KIT ligand
chr8_-_20040601 0.09 ENST00000265808.7
ENST00000522513.1
SLC18A1
solute carrier family 18 (vesicular monoamine transporter), member 1
chrX_-_125686784 0.09 ENST00000371126.1
DCAF12L1
DDB1 and CUL4 associated factor 12-like 1
chr20_+_11008408 0.08 ENST00000378252.1
C20orf187
chromosome 20 open reading frame 187
chr7_+_16793160 0.08 ENST00000262067.4
TSPAN13
tetraspanin 13
chr17_-_53809473 0.08 ENST00000575734.1
TMEM100
transmembrane protein 100
chr4_-_144826682 0.08 ENST00000358615.4
ENST00000437468.2
GYPE
glycophorin E (MNS blood group)
chr13_+_33160553 0.08 ENST00000315596.10
PDS5B
PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
chr5_+_140588269 0.08 ENST00000541609.1
ENST00000239450.2
PCDHB12
protocadherin beta 12
chr6_-_31632962 0.08 ENST00000456540.1
ENST00000445768.1
GPANK1
G patch domain and ankyrin repeats 1
chr12_-_21927736 0.08 ENST00000240662.2
KCNJ8
potassium inwardly-rectifying channel, subfamily J, member 8
chr7_-_92777606 0.08 ENST00000437805.1
ENST00000446959.1
ENST00000439952.1
ENST00000414791.1
ENST00000446033.1
ENST00000411955.1
ENST00000318238.4
SAMD9L
sterile alpha motif domain containing 9-like
chr1_-_213020991 0.08 ENST00000332912.3
C1orf227
chromosome 1 open reading frame 227
chr3_+_158787041 0.08 ENST00000471575.1
ENST00000476809.1
ENST00000485419.1
IQCJ-SCHIP1
IQCJ-SCHIP1 readthrough
chr16_-_66764119 0.08 ENST00000569320.1
DYNC1LI2
dynein, cytoplasmic 1, light intermediate chain 2
chr12_+_26348246 0.08 ENST00000422622.2
SSPN
sarcospan
chr2_-_163695238 0.07 ENST00000328032.4
KCNH7
potassium voltage-gated channel, subfamily H (eag-related), member 7
chr12_-_15104040 0.07 ENST00000541644.1
ENST00000545895.1
ARHGDIB
Rho GDP dissociation inhibitor (GDI) beta
chr5_+_140248518 0.07 ENST00000398640.2
PCDHA11
protocadherin alpha 11
chr1_+_44870866 0.07 ENST00000355387.2
ENST00000361799.2
RNF220
ring finger protein 220
chr10_-_49459800 0.07 ENST00000305531.3
FRMPD2
FERM and PDZ domain containing 2
chr17_-_39646116 0.07 ENST00000328119.6
KRT36
keratin 36
chr22_-_37213554 0.07 ENST00000443735.1
PVALB
parvalbumin
chr2_-_136594740 0.07 ENST00000264162.2
LCT
lactase
chr4_-_84035868 0.07 ENST00000426923.2
ENST00000509973.1
PLAC8
placenta-specific 8
chr17_-_10452929 0.07 ENST00000532183.2
ENST00000397183.2
ENST00000420805.1
MYH2
myosin, heavy chain 2, skeletal muscle, adult
chr5_+_135496675 0.07 ENST00000507637.1
SMAD5
SMAD family member 5
chr13_+_51483814 0.07 ENST00000336617.3
ENST00000422660.1
RNASEH2B
ribonuclease H2, subunit B
chr2_+_145780725 0.06 ENST00000451478.1
TEX41
testis expressed 41 (non-protein coding)
chr6_-_49712123 0.06 ENST00000263045.4
CRISP3
cysteine-rich secretory protein 3
chrX_-_72434628 0.06 ENST00000536638.1
ENST00000373517.3
NAP1L2
nucleosome assembly protein 1-like 2
chr11_-_8986474 0.06 ENST00000525069.1
TMEM9B
TMEM9 domain family, member B
chr15_-_45493289 0.06 ENST00000561278.1
ENST00000290894.8
SHF
Src homology 2 domain containing F
chr4_-_84035905 0.06 ENST00000311507.4
PLAC8
placenta-specific 8
chr12_-_95009837 0.06 ENST00000551457.1
TMCC3
transmembrane and coiled-coil domain family 3
chr6_+_131894284 0.06 ENST00000368087.3
ENST00000356962.2
ARG1
arginase 1
chr2_+_114647504 0.05 ENST00000263238.2
ACTR3
ARP3 actin-related protein 3 homolog (yeast)
chr2_+_128458514 0.05 ENST00000310981.4
SFT2D3
SFT2 domain containing 3
chr2_+_89986318 0.05 ENST00000491977.1
IGKV2D-29
immunoglobulin kappa variable 2D-29
chr2_+_145780767 0.05 ENST00000599358.1
ENST00000596278.1
ENST00000596747.1
ENST00000608652.1
ENST00000609705.1
ENST00000608432.1
ENST00000596970.1
ENST00000602041.1
ENST00000601578.1
ENST00000596034.1
ENST00000414195.2
ENST00000594837.1
TEX41
testis expressed 41 (non-protein coding)

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXD9

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0014057 positive regulation of acetylcholine secretion, neurotransmission(GO:0014057)
0.3 0.8 GO:0051758 homologous chromosome movement towards spindle pole involved in homologous chromosome segregation(GO:0051758)
0.2 0.9 GO:0010513 positive regulation of phosphatidylinositol biosynthetic process(GO:0010513)
0.2 0.3 GO:0042214 terpene metabolic process(GO:0042214)
0.2 0.7 GO:0001970 positive regulation of activation of membrane attack complex(GO:0001970)
0.1 0.4 GO:0052314 phytoalexin metabolic process(GO:0052314)
0.1 0.9 GO:1990034 cellular response to corticosterone stimulus(GO:0071386) calcium ion export from cell(GO:1990034)
0.1 0.3 GO:0003099 regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback(GO:0001978) baroreceptor response to increased systemic arterial blood pressure(GO:0001983) positive regulation of the force of heart contraction by chemical signal(GO:0003099)
0.1 0.3 GO:0036071 N-glycan fucosylation(GO:0036071)
0.1 0.3 GO:0030505 inorganic diphosphate transport(GO:0030505)
0.1 0.3 GO:0050717 positive regulation of interleukin-1 alpha secretion(GO:0050717)
0.1 0.2 GO:0033364 mast cell secretory granule organization(GO:0033364)
0.1 0.2 GO:0015842 aminergic neurotransmitter loading into synaptic vesicle(GO:0015842)
0.1 0.3 GO:0050917 sensory perception of sweet taste(GO:0050916) sensory perception of umami taste(GO:0050917)
0.1 3.4 GO:0010107 potassium ion import(GO:0010107)
0.1 0.7 GO:1900378 positive regulation of melanin biosynthetic process(GO:0048023) positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.1 0.4 GO:1904209 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.1 0.3 GO:0030241 skeletal muscle myosin thick filament assembly(GO:0030241)
0.0 0.1 GO:0019417 sulfur oxidation(GO:0019417)
0.0 0.3 GO:0051177 meiotic sister chromatid cohesion(GO:0051177)
0.0 0.2 GO:0021779 oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780)
0.0 0.3 GO:0060371 regulation of atrial cardiac muscle cell membrane depolarization(GO:0060371)
0.0 0.1 GO:0035990 tendon cell differentiation(GO:0035990) tendon formation(GO:0035992)
0.0 0.7 GO:0015671 oxygen transport(GO:0015671)
0.0 0.4 GO:0001867 complement activation, lectin pathway(GO:0001867)
0.0 0.1 GO:1904588 cellular response to glycoprotein(GO:1904588) cellular response to thyrotropin-releasing hormone(GO:1905229)
0.0 0.1 GO:0046005 positive regulation of circadian sleep/wake cycle, REM sleep(GO:0046005)
0.0 0.1 GO:0035262 gonad morphogenesis(GO:0035262)
0.0 0.3 GO:0031666 positive regulation of lipopolysaccharide-mediated signaling pathway(GO:0031666)
0.0 0.1 GO:0033024 mast cell homeostasis(GO:0033023) mast cell apoptotic process(GO:0033024) regulation of mast cell apoptotic process(GO:0033025) regulation of mast cell proliferation(GO:0070666) positive regulation of mast cell proliferation(GO:0070668)
0.0 0.3 GO:0034285 response to sucrose(GO:0009744) response to disaccharide(GO:0034285)
0.0 1.0 GO:1901687 glutathione derivative metabolic process(GO:1901685) glutathione derivative biosynthetic process(GO:1901687)
0.0 0.1 GO:0010760 negative regulation of macrophage chemotaxis(GO:0010760)
0.0 0.5 GO:0019800 peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800)
0.0 0.3 GO:0006610 ribosomal protein import into nucleus(GO:0006610)
0.0 0.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.6 GO:0007158 neuron cell-cell adhesion(GO:0007158)
0.0 0.8 GO:0045745 positive regulation of G-protein coupled receptor protein signaling pathway(GO:0045745)
0.0 0.1 GO:0016344 meiotic chromosome movement towards spindle pole(GO:0016344)
0.0 0.6 GO:0044458 motile cilium assembly(GO:0044458)
0.0 0.1 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.1 GO:0048254 snoRNA localization(GO:0048254)
0.0 0.7 GO:0045494 axoneme assembly(GO:0035082) photoreceptor cell maintenance(GO:0045494)
0.0 0.3 GO:2000353 positive regulation of endothelial cell apoptotic process(GO:2000353)
0.0 0.1 GO:0048739 cardiac muscle fiber development(GO:0048739)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.9 GO:0007595 lactation(GO:0007595)
0.0 0.1 GO:2000253 positive regulation of feeding behavior(GO:2000253)
0.0 0.1 GO:0001880 Mullerian duct regression(GO:0001880)
0.0 0.1 GO:0010958 regulation of amino acid import(GO:0010958) L-arginine import(GO:0043091) arginine import(GO:0090467)
0.0 0.7 GO:0002381 immunoglobulin production involved in immunoglobulin mediated immune response(GO:0002381)
0.0 0.1 GO:0071461 cellular response to redox state(GO:0071461)
0.0 0.8 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.1 GO:0070830 bicellular tight junction assembly(GO:0070830)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:1990423 RZZ complex(GO:1990423)
0.1 0.6 GO:0097224 sperm connecting piece(GO:0097224)
0.1 1.2 GO:0000439 core TFIIH complex(GO:0000439)
0.1 0.9 GO:1990111 spermatoproteasome complex(GO:1990111)
0.1 0.8 GO:0005579 membrane attack complex(GO:0005579)
0.1 0.3 GO:0072558 NLRP1 inflammasome complex(GO:0072558) protease inhibitor complex(GO:0097179)
0.0 0.7 GO:0005833 hemoglobin complex(GO:0005833)
0.0 0.5 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.9 GO:0032591 dendritic spine membrane(GO:0032591)
0.0 0.8 GO:0042613 MHC class II protein complex(GO:0042613)
0.0 0.2 GO:0070083 clathrin-sculpted monoamine transport vesicle(GO:0070081) clathrin-sculpted monoamine transport vesicle membrane(GO:0070083)
0.0 0.4 GO:0033269 internode region of axon(GO:0033269)
0.0 0.7 GO:0030285 integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.5 GO:0045009 melanosome membrane(GO:0033162) chitosome(GO:0045009)
0.0 0.1 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 3.2 GO:0008076 voltage-gated potassium channel complex(GO:0008076)
0.0 0.3 GO:0071439 clathrin complex(GO:0071439)
0.0 0.7 GO:0032391 photoreceptor connecting cilium(GO:0032391)
0.0 0.1 GO:0005826 actomyosin contractile ring(GO:0005826)
0.0 0.1 GO:0043196 varicosity(GO:0043196)
0.0 1.0 GO:0030286 dynein complex(GO:0030286)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.1 GO:0004995 tachykinin receptor activity(GO:0004995)
0.2 3.3 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.1 0.4 GO:0019959 interleukin-8 binding(GO:0019959)
0.1 0.3 GO:0004937 alpha1-adrenergic receptor activity(GO:0004937)
0.1 0.3 GO:0008424 glycoprotein 6-alpha-L-fucosyltransferase activity(GO:0008424) alpha-(1->6)-fucosyltransferase activity(GO:0046921)
0.1 0.3 GO:0005174 CD40 receptor binding(GO:0005174)
0.1 0.8 GO:0004321 fatty-acyl-CoA synthase activity(GO:0004321)
0.1 0.6 GO:0034711 inhibin binding(GO:0034711)
0.1 0.9 GO:0051378 amine binding(GO:0043176) serotonin binding(GO:0051378)
0.1 0.2 GO:0015222 serotonin transmembrane transporter activity(GO:0015222)
0.1 0.3 GO:0004948 calcitonin receptor activity(GO:0004948)
0.1 0.8 GO:0032395 MHC class II receptor activity(GO:0032395)
0.1 0.3 GO:0035529 NADH pyrophosphatase activity(GO:0035529)
0.0 0.2 GO:0004886 9-cis retinoic acid receptor activity(GO:0004886)
0.0 1.0 GO:0045504 dynein heavy chain binding(GO:0045504)
0.0 0.6 GO:0032027 myosin light chain binding(GO:0032027)
0.0 0.7 GO:0005344 oxygen transporter activity(GO:0005344)
0.0 0.5 GO:0005549 odorant binding(GO:0005549)
0.0 0.8 GO:0002162 dystroglycan binding(GO:0002162)
0.0 0.9 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.1 GO:0005173 stem cell factor receptor binding(GO:0005173)
0.0 0.9 GO:0004298 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.0 0.1 GO:0051431 corticotropin-releasing hormone receptor 2 binding(GO:0051431)
0.0 0.8 GO:0047555 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555)
0.0 0.7 GO:0008191 metalloendopeptidase inhibitor activity(GO:0008191)
0.0 0.1 GO:0017098 sulfonylurea receptor binding(GO:0017098)
0.0 0.1 GO:0016608 growth hormone-releasing hormone activity(GO:0016608)
0.0 0.2 GO:0001594 trace-amine receptor activity(GO:0001594)
0.0 0.4 GO:0019911 structural constituent of myelin sheath(GO:0019911)
0.0 0.3 GO:0031433 telethonin binding(GO:0031433)
0.0 0.1 GO:0004996 thyroid-stimulating hormone receptor activity(GO:0004996)
0.0 1.0 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0039552 RIG-I binding(GO:0039552)
0.0 0.1 GO:0030621 U4 snRNA binding(GO:0030621)
0.0 0.1 GO:0008422 beta-glucosidase activity(GO:0008422)
0.0 0.3 GO:0005149 interleukin-1 receptor binding(GO:0005149)
0.0 0.1 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.3 GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process(GO:0008656)
0.0 0.1 GO:0004064 arylesterase activity(GO:0004064)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.3 GO:1905030 voltage-gated sodium channel activity(GO:0005248) voltage-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1905030)
0.0 0.1 GO:0005412 glucose:sodium symporter activity(GO:0005412)
0.0 0.3 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.8 PID CONE PATHWAY Visual signal transduction: Cones

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.0 REACTOME COMMON PATHWAY Genes involved in Common Pathway
0.1 3.0 REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits
0.1 0.9 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.0 1.4 REACTOME COMPLEMENT CASCADE Genes involved in Complement cascade
0.0 1.0 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.5 REACTOME AMINE DERIVED HORMONES Genes involved in Amine-derived hormones
0.0 0.3 REACTOME THE NLRP3 INFLAMMASOME Genes involved in The NLRP3 inflammasome
0.0 0.4 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.0 0.5 REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX Genes involved in Degradation of the extracellular matrix
0.0 0.5 REACTOME AMINE LIGAND BINDING RECEPTORS Genes involved in Amine ligand-binding receptors
0.0 0.3 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.9 REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES Genes involved in Cross-presentation of soluble exogenous antigens (endosomes)