Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NKX3-2 | hg19_v2_chr4_-_13546632_13546674 | -0.21 | 2.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr9_-_112970436 Show fit | 12.16 |
ENST00000400613.4
|
chromosome 9 open reading frame 152 |
|
chr1_-_161337662 Show fit | 11.59 |
ENST00000367974.1
|
chromosome 1 open reading frame 192 |
|
chr9_-_34397800 Show fit | 10.71 |
ENST00000297623.2
|
chromosome 9 open reading frame 24 |
|
chr5_-_149792295 Show fit | 7.94 |
ENST00000518797.1
ENST00000524315.1 ENST00000009530.7 ENST00000377795.3 |
CD74 molecule, major histocompatibility complex, class II invariant chain |
|
chr6_-_32557610 Show fit | 7.62 |
ENST00000360004.5
|
major histocompatibility complex, class II, DR beta 1 |
|
chr7_-_99573677 Show fit | 7.37 |
ENST00000292401.4
|
alpha-2-glycoprotein 1, zinc-binding |
|
chr17_-_74137374 Show fit | 7.26 |
ENST00000322957.6
|
forkhead box J1 |
|
chr13_+_43355683 Show fit | 6.96 |
ENST00000537894.1
|
family with sequence similarity 216, member B |
|
chr13_+_43355732 Show fit | 6.94 |
ENST00000313851.1
|
family with sequence similarity 216, member B |
|
chr9_+_34458771 Show fit | 6.94 |
ENST00000437363.1
ENST00000242317.4 |
dynein, axonemal, intermediate chain 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.8 | GO:0048384 | retinoic acid receptor signaling pathway(GO:0048384) |
0.4 | 10.7 | GO:0019800 | peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan(GO:0019800) |
0.1 | 10.5 | GO:0016266 | O-glycan processing(GO:0016266) |
0.2 | 9.0 | GO:0001580 | detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580) |
0.8 | 8.0 | GO:0051388 | positive regulation of neurotrophin TRK receptor signaling pathway(GO:0051388) |
1.6 | 7.9 | GO:0002906 | mature B cell apoptotic process(GO:0002901) regulation of mature B cell apoptotic process(GO:0002905) negative regulation of mature B cell apoptotic process(GO:0002906) |
1.5 | 7.6 | GO:0002399 | MHC class II protein complex assembly(GO:0002399) |
0.2 | 7.6 | GO:0010107 | potassium ion import(GO:0010107) |
2.4 | 7.3 | GO:0002663 | B cell tolerance induction(GO:0002514) regulation of B cell tolerance induction(GO:0002661) positive regulation of B cell tolerance induction(GO:0002663) |
0.0 | 7.1 | GO:1904668 | positive regulation of ubiquitin protein ligase activity(GO:1904668) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.6 | GO:0005796 | Golgi lumen(GO:0005796) |
0.5 | 10.0 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.0 | 9.2 | GO:0043235 | receptor complex(GO:0043235) |
0.1 | 8.1 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
1.1 | 7.9 | GO:0035692 | macrophage migration inhibitory factor receptor complex(GO:0035692) |
0.6 | 6.9 | GO:0036157 | outer dynein arm(GO:0036157) |
0.5 | 4.5 | GO:1990111 | spermatoproteasome complex(GO:1990111) |
0.1 | 4.5 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.0 | 4.2 | GO:0035578 | azurophil granule lumen(GO:0035578) |
0.7 | 3.7 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 11.8 | GO:0008320 | protein transmembrane transporter activity(GO:0008320) |
0.4 | 10.7 | GO:0008191 | metalloendopeptidase inhibitor activity(GO:0008191) |
1.3 | 8.8 | GO:0050682 | AF-2 domain binding(GO:0050682) |
1.6 | 7.9 | GO:0042289 | MHC class II protein binding(GO:0042289) |
0.2 | 7.1 | GO:0023026 | MHC class II protein complex binding(GO:0023026) |
0.3 | 6.9 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
0.2 | 6.9 | GO:0044183 | protein binding involved in protein folding(GO:0044183) |
0.4 | 6.5 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
0.0 | 5.4 | GO:0001077 | transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001077) |
0.0 | 5.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 11.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 9.1 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 6.7 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.1 | 6.6 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.0 | 3.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 2.9 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.1 | 2.7 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 2.2 | PID ERBB2 ERBB3 PATHWAY | ErbB2/ErbB3 signaling events |
0.0 | 1.9 | PID P75 NTR PATHWAY | p75(NTR)-mediated signaling |
0.0 | 1.6 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 11.2 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.1 | 8.5 | REACTOME MHC CLASS II ANTIGEN PRESENTATION | Genes involved in MHC class II antigen presentation |
0.3 | 7.6 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.1 | 7.6 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.2 | 6.5 | REACTOME INHIBITION OF VOLTAGE GATED CA2 CHANNELS VIA GBETA GAMMA SUBUNITS | Genes involved in Inhibition of voltage gated Ca2+ channels via Gbeta/gamma subunits |
0.1 | 5.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.1 | 4.5 | REACTOME CDK MEDIATED PHOSPHORYLATION AND REMOVAL OF CDC6 | Genes involved in CDK-mediated phosphorylation and removal of Cdc6 |
0.1 | 4.2 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.2 | 4.1 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.3 | 3.8 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |