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Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)

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Results for PDX1

Z-value: 0.61

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Transcription factors associated with PDX1

Gene Symbol Gene ID Gene Info
ENSG00000139515.5 pancreatic and duodenal homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
PDX1hg19_v2_chr13_+_28494130_284941680.311.0e-01Click!

Activity profile of PDX1 motif

Sorted Z-values of PDX1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_152386732 1.25 ENST00000271835.3
cornulin
chr12_+_107712173 0.81 ENST00000280758.5
ENST00000420571.2
BTB (POZ) domain containing 11
chr7_-_44229022 0.73 ENST00000403799.3
glucokinase (hexokinase 4)
chr20_+_60174827 0.68 ENST00000543233.1
cadherin 4, type 1, R-cadherin (retinal)
chr9_-_14722715 0.68 ENST00000380911.3
cerberus 1, DAN family BMP antagonist
chr15_+_75080883 0.62 ENST00000567571.1
c-src tyrosine kinase
chr4_-_109541539 0.60 ENST00000509984.1
ENST00000507248.1
ENST00000506795.1
RPL34 antisense RNA 1 (head to head)
chr1_+_62439037 0.59 ENST00000545929.1
InaD-like (Drosophila)
chr8_-_133123406 0.58 ENST00000434736.2
HERV-H LTR-associating 1
chr18_+_29027696 0.58 ENST00000257189.4
desmoglein 3
chr14_+_22985251 0.57 ENST00000390510.1
T cell receptor alpha joining 27
chr1_+_84609944 0.57 ENST00000370685.3
protein kinase, cAMP-dependent, catalytic, beta
chr17_-_38911580 0.56 ENST00000312150.4
keratin 25
chr3_-_57233966 0.55 ENST00000473921.1
ENST00000295934.3
HESX homeobox 1
chr18_+_28898052 0.53 ENST00000257192.4
desmoglein 1
chr12_-_57328187 0.50 ENST00000293502.1
short chain dehydrogenase/reductase family 9C, member 7
chr17_-_39150385 0.45 ENST00000391586.1
keratin associated protein 3-3
chr1_+_160160346 0.45 ENST00000368078.3
calsequestrin 1 (fast-twitch, skeletal muscle)
chr4_-_139163491 0.44 ENST00000280612.5
solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
chr15_-_55562479 0.44 ENST00000564609.1
RAB27A, member RAS oncogene family
chr1_+_160160283 0.44 ENST00000368079.3
calsequestrin 1 (fast-twitch, skeletal muscle)
chr3_-_112127981 0.43 ENST00000486726.2
RP11-231E6.1
chr8_-_131399110 0.41 ENST00000521426.1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
chr6_-_32157947 0.41 ENST00000375050.4
pre-B-cell leukemia homeobox 2
chr15_-_55563072 0.41 ENST00000567380.1
ENST00000565972.1
ENST00000569493.1
RAB27A, member RAS oncogene family
chr11_-_8285405 0.40 ENST00000335790.3
ENST00000534484.1
LIM domain only 1 (rhombotin 1)
chr5_+_135394840 0.40 ENST00000503087.1
transforming growth factor, beta-induced, 68kDa
chr9_-_123639304 0.39 ENST00000436309.1
PHD finger protein 19
chr4_+_86525299 0.39 ENST00000512201.1
Rho GTPase activating protein 24
chr12_+_15699286 0.38 ENST00000442921.2
ENST00000542557.1
ENST00000445537.2
ENST00000544244.1
protein tyrosine phosphatase, receptor type, O
chr4_-_140544386 0.38 ENST00000561977.1
RP11-308D13.3
chr13_-_99667960 0.38 ENST00000448493.2
dedicator of cytokinesis 9
chr2_+_48541776 0.38 ENST00000413569.1
ENST00000340553.3
forkhead box N2
chr8_+_7783859 0.37 ENST00000400120.3
zinc finger protein 705B
chr12_-_54813229 0.37 ENST00000293379.4
integrin, alpha 5 (fibronectin receptor, alpha polypeptide)
chr11_+_65554493 0.37 ENST00000335987.3
ovo-like zinc finger 1
chr9_+_125133315 0.36 ENST00000223423.4
ENST00000362012.2
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr12_+_56325812 0.36 ENST00000394147.1
ENST00000551156.1
ENST00000553783.1
ENST00000557080.1
ENST00000432422.3
ENST00000556001.1
diacylglycerol kinase, alpha 80kDa
chr17_-_18430160 0.36 ENST00000392176.3
family with sequence similarity 106, member A
chr10_-_48416849 0.35 ENST00000249598.1
growth differentiation factor 2
chr9_+_135457530 0.35 ENST00000263610.2
BarH-like homeobox 1
chr11_-_8290263 0.35 ENST00000428101.2
LIM domain only 1 (rhombotin 1)
chr4_-_69111401 0.35 ENST00000332644.5
transmembrane protease, serine 11B
chr5_+_126984710 0.35 ENST00000379445.3
cortexin 3
chr17_-_9694614 0.35 ENST00000330255.5
ENST00000571134.1
dehydrogenase/reductase (SDR family) member 7C
chr12_-_6233828 0.35 ENST00000572068.1
ENST00000261405.5
von Willebrand factor
chr8_-_42234745 0.34 ENST00000220812.2
dickkopf WNT signaling pathway inhibitor 4
chr9_-_136933615 0.34 ENST00000371834.2
bromodomain containing 3
chr14_-_57272366 0.33 ENST00000554788.1
ENST00000554845.1
ENST00000408990.3
orthodenticle homeobox 2
chr12_-_86650077 0.33 ENST00000552808.2
ENST00000547225.1
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
chr14_-_77889860 0.33 ENST00000555603.1
NADP-dependent oxidoreductase domain containing 1
chr12_-_91576429 0.32 ENST00000552145.1
ENST00000546745.1
decorin
chr6_+_34204642 0.32 ENST00000347617.6
ENST00000401473.3
ENST00000311487.5
ENST00000447654.1
ENST00000395004.3
high mobility group AT-hook 1
chr20_+_42984330 0.32 ENST00000316673.4
ENST00000609795.1
ENST00000457232.1
ENST00000609262.1
hepatocyte nuclear factor 4, alpha
chr2_-_208031943 0.31 ENST00000421199.1
ENST00000457962.1
Kruppel-like factor 7 (ubiquitous)
chr9_-_123639600 0.31 ENST00000373896.3
PHD finger protein 19
chr7_+_129015484 0.30 ENST00000490911.1
adenosylhomocysteinase-like 2
chr7_-_100860851 0.30 ENST00000223127.3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
chr3_-_98235962 0.30 ENST00000513873.1
claudin domain containing 1
chr9_+_125132803 0.30 ENST00000540753.1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr15_-_55562582 0.30 ENST00000396307.2
RAB27A, member RAS oncogene family
chr15_+_28624878 0.29 ENST00000450328.2
golgin A8 family, member F
chr3_-_143567262 0.29 ENST00000474151.1
ENST00000316549.6
solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9
chr12_-_53171128 0.29 ENST00000332411.2
keratin 76
chr11_-_82444892 0.28 ENST00000329203.3
family with sequence similarity 181, member B
chr4_+_70796784 0.28 ENST00000246891.4
ENST00000444405.3
casein alpha s1
chr9_-_123639445 0.27 ENST00000312189.6
PHD finger protein 19
chr21_+_17792672 0.27 ENST00000602620.1
long intergenic non-protein coding RNA 478
chr20_+_30697298 0.27 ENST00000398022.2
transmembrane 9 superfamily protein member 4
chr15_+_58430567 0.26 ENST00000536493.1
aquaporin 9
chr10_+_119301928 0.26 ENST00000553456.3
empty spiracles homeobox 2
chr4_-_116034979 0.26 ENST00000264363.2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4
chr17_-_46690839 0.26 ENST00000498634.2
homeobox B8
chrX_-_20236970 0.26 ENST00000379548.4
ribosomal protein S6 kinase, 90kDa, polypeptide 3
chr15_+_58430368 0.25 ENST00000558772.1
ENST00000219919.4
aquaporin 9
chr7_+_50348268 0.25 ENST00000438033.1
ENST00000439701.1
IKAROS family zinc finger 1 (Ikaros)
chr20_+_62795827 0.25 ENST00000328439.1
ENST00000536311.1
myelin transcription factor 1
chr17_-_27418537 0.25 ENST00000408971.2
TGFB1-induced anti-apoptotic factor 1
chr7_-_14028488 0.24 ENST00000405358.4
ets variant 1
chr12_+_28410128 0.24 ENST00000381259.1
ENST00000381256.1
coiled-coil domain containing 91
chrX_-_21676442 0.24 ENST00000379499.2
kelch-like family member 34
chr9_-_28670283 0.23 ENST00000379992.2
leucine rich repeat and Ig domain containing 2
chr14_-_36988882 0.23 ENST00000498187.2
NK2 homeobox 1
chr18_+_59000815 0.22 ENST00000262717.4
cadherin 20, type 2
chr7_-_81399411 0.22 ENST00000423064.2
hepatocyte growth factor (hepapoietin A; scatter factor)
chr2_+_45168875 0.22 ENST00000260653.3
SIX homeobox 3
chr4_-_39979576 0.22 ENST00000303538.8
ENST00000503396.1
PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
chr7_-_81399355 0.22 ENST00000457544.2
hepatocyte growth factor (hepapoietin A; scatter factor)
chr4_-_123377880 0.22 ENST00000226730.4
interleukin 2
chr7_-_27169801 0.21 ENST00000511914.1
homeobox A4
chr20_+_43538692 0.21 ENST00000217074.4
ENST00000255136.3
poly(A) binding protein, cytoplasmic 1-like
chr8_-_7243080 0.21 ENST00000400156.4
zinc finger protein 705G
chr7_-_14029283 0.21 ENST00000433547.1
ENST00000405192.2
ets variant 1
chr18_-_30353025 0.21 ENST00000359358.4
kelch-like family member 14
chr6_+_167704838 0.21 ENST00000366829.2
unc-93 homolog A (C. elegans)
chr12_-_52967600 0.20 ENST00000549343.1
ENST00000305620.2
keratin 74
chr17_-_57229155 0.20 ENST00000584089.1
spindle and kinetochore associated complex subunit 2
chr15_+_63188009 0.20 ENST00000557900.1
RP11-1069G10.2
chr12_+_81110684 0.20 ENST00000228644.3
myogenic factor 5
chr20_-_31124186 0.20 ENST00000375678.3
chromosome 20 open reading frame 112
chrX_+_7137475 0.20 ENST00000217961.4
steroid sulfatase (microsomal), isozyme S
chr4_+_141445311 0.20 ENST00000323570.3
ENST00000511887.2
ELMO/CED-12 domain containing 2
chr21_-_35899113 0.20 ENST00000492600.1
ENST00000481448.1
ENST00000381132.2
regulator of calcineurin 1
chr14_+_100485712 0.20 ENST00000544450.2
Enah/Vasp-like
chr20_+_45947246 0.19 ENST00000599904.1
HCG2018772; Uncharacterized protein; cDNA FLJ31609 fis, clone NT2RI2002852
chr2_-_112237835 0.19 ENST00000442293.1
ENST00000439494.1
MIR4435-1 host gene (non-protein coding)
chr2_+_196313239 0.19 ENST00000413290.1
AC064834.1
chr6_+_29079668 0.19 ENST00000377169.1
olfactory receptor, family 2, subfamily J, member 3
chr2_+_90060377 0.19 ENST00000436451.2
immunoglobulin kappa variable 6D-21 (non-functional)
chr20_+_43538756 0.19 ENST00000537323.1
ENST00000217073.2
poly(A) binding protein, cytoplasmic 1-like
chr17_-_39156138 0.19 ENST00000391587.1
keratin associated protein 3-2
chr15_+_62853562 0.18 ENST00000561311.1
talin 2
chr2_-_99871570 0.18 ENST00000333017.2
ENST00000409679.1
ENST00000423306.1
lysozyme G-like 2
chr3_-_74570291 0.18 ENST00000263665.6
contactin 3 (plasmacytoma associated)
chr10_+_63808970 0.18 ENST00000309334.5
AT rich interactive domain 5B (MRF1-like)
chr13_+_102104952 0.18 ENST00000376180.3
integrin, beta-like 1 (with EGF-like repeat domains)
chr6_+_167704798 0.18 ENST00000230256.3
unc-93 homolog A (C. elegans)
chr8_+_77593448 0.18 ENST00000521891.2
zinc finger homeobox 4
chr19_-_7968427 0.18 ENST00000539278.1
Uncharacterized protein
chr11_-_115630900 0.18 ENST00000537070.1
ENST00000499809.1
ENST00000514294.2
ENST00000535683.1
long intergenic non-protein coding RNA 900
chr3_-_39321512 0.18 ENST00000399220.2
chemokine (C-X3-C motif) receptor 1
chr2_+_87769459 0.17 ENST00000414030.1
ENST00000437561.1
long intergenic non-protein coding RNA 152
chr10_-_21435488 0.17 ENST00000534331.1
ENST00000529198.1
ENST00000377118.4
chromosome 10 open reading frame 113
chr3_+_111718173 0.17 ENST00000494932.1
transgelin 3
chr14_+_22554680 0.17 ENST00000390451.2
T cell receptor alpha variable 23/delta variable 6
chr4_-_103749179 0.17 ENST00000502690.1
ubiquitin-conjugating enzyme E2D 3
chr8_+_9953214 0.17 ENST00000382490.5
methionine sulfoxide reductase A
chr2_-_89459813 0.16 ENST00000390256.2
immunoglobulin kappa variable 6-21 (non-functional)
chr3_-_108248169 0.16 ENST00000273353.3
myosin, heavy chain 15
chr17_+_74846230 0.16 ENST00000592919.1
long intergenic non-protein coding RNA 868
chr21_+_17442799 0.16 ENST00000602580.1
ENST00000458468.1
ENST00000602935.1
long intergenic non-protein coding RNA 478
chr22_-_32860427 0.16 ENST00000534972.1
ENST00000397450.1
ENST00000397452.1
BPI fold containing family C
chr2_-_227050079 0.16 ENST00000423838.1
AC068138.1
chr8_+_77593474 0.16 ENST00000455469.2
ENST00000050961.6
zinc finger homeobox 4
chr1_+_28586006 0.16 ENST00000253063.3
sestrin 2
chr8_+_9953061 0.15 ENST00000522907.1
ENST00000528246.1
methionine sulfoxide reductase A
chr4_-_103749205 0.15 ENST00000508249.1
ubiquitin-conjugating enzyme E2D 3
chr8_-_37457350 0.15 ENST00000519691.1
RP11-150O12.3
chr1_+_1846519 0.15 ENST00000378604.3
calmodulin-like 6
chrX_-_110655306 0.15 ENST00000371993.2
doublecortin
chr1_-_151965048 0.15 ENST00000368809.1
S100 calcium binding protein A10
chr4_-_119759795 0.14 ENST00000419654.2
SEC24 family member D
chr1_-_190446759 0.14 ENST00000367462.3
bone morphogenetic protein/retinoic acid inducible neural-specific 3
chr4_-_66536196 0.14 ENST00000511294.1
EPH receptor A5
chr10_+_24738355 0.14 ENST00000307544.6
KIAA1217
chr19_-_47137942 0.14 ENST00000300873.4
guanine nucleotide binding protein (G protein), gamma 8
chr10_+_11047259 0.14 ENST00000379261.4
ENST00000416382.2
CUGBP, Elav-like family member 2
chr4_+_71587669 0.14 ENST00000381006.3
ENST00000226328.4
RUN and FYVE domain containing 3
chr6_-_100912785 0.13 ENST00000369208.3
single-minded family bHLH transcription factor 1
chr7_-_73038822 0.13 ENST00000414749.2
ENST00000429400.2
ENST00000434326.1
MLX interacting protein-like
chr8_+_22424551 0.13 ENST00000523348.1
sorbin and SH3 domain containing 3
chr14_+_61654271 0.13 ENST00000555185.1
ENST00000557294.1
ENST00000556778.1
protein kinase C, eta
chr1_-_68698222 0.13 ENST00000370976.3
ENST00000354777.2
ENST00000262348.4
ENST00000540432.1
wntless Wnt ligand secretion mediator
chr7_-_73038867 0.13 ENST00000313375.3
ENST00000354613.1
ENST00000395189.1
ENST00000453275.1
MLX interacting protein-like
chr15_+_93443419 0.13 ENST00000557381.1
ENST00000420239.2
chromodomain helicase DNA binding protein 2
chr3_+_69985792 0.13 ENST00000531774.1
microphthalmia-associated transcription factor
chr1_+_12834984 0.12 ENST00000357726.4
PRAME family member 12
chr11_-_115375107 0.12 ENST00000545380.1
ENST00000452722.3
ENST00000537058.1
ENST00000536727.1
ENST00000542447.2
ENST00000331581.6
cell adhesion molecule 1
chr14_-_69261310 0.12 ENST00000336440.3
ZFP36 ring finger protein-like 1
chr4_-_66536057 0.11 ENST00000273854.3
EPH receptor A5
chr1_-_13002348 0.11 ENST00000355096.2
PRAME family member 6
chr4_-_103749313 0.11 ENST00000394803.5
ubiquitin-conjugating enzyme E2D 3
chr19_+_641178 0.11 ENST00000166133.3
fibroblast growth factor 22
chr21_+_17443521 0.11 ENST00000456342.1
long intergenic non-protein coding RNA 478
chr16_+_6533729 0.11 ENST00000551752.1
RNA binding protein, fox-1 homolog (C. elegans) 1
chr14_-_95236551 0.11 ENST00000238558.3
goosecoid homeobox
chr6_-_111136513 0.11 ENST00000368911.3
cyclin-dependent kinase 19
chr21_+_17443434 0.10 ENST00000400178.2
long intergenic non-protein coding RNA 478
chr15_+_69854027 0.10 ENST00000498938.2
RP11-279F6.1
chr4_+_169013666 0.10 ENST00000359299.3
annexin A10
chrX_-_18690210 0.10 ENST00000379984.3
retinoschisin 1
chr7_-_81399438 0.10 ENST00000222390.5
hepatocyte growth factor (hepapoietin A; scatter factor)
chr9_+_136501478 0.10 ENST00000393056.2
ENST00000263611.2
dopamine beta-hydroxylase (dopamine beta-monooxygenase)
chr18_+_3447572 0.10 ENST00000548489.2
TGFB-induced factor homeobox 1
chr5_-_9630463 0.10 ENST00000382492.2
taste receptor, type 2, member 1
chr3_+_136649311 0.10 ENST00000469404.1
ENST00000467911.1
NCK adaptor protein 1
chr1_-_68698197 0.10 ENST00000370973.2
ENST00000370971.1
wntless Wnt ligand secretion mediator
chr12_+_81101277 0.10 ENST00000228641.3
myogenic factor 6 (herculin)
chrX_-_64196376 0.10 ENST00000447788.2
zinc finger, C4H2 domain containing
chr19_+_13049413 0.09 ENST00000316448.5
ENST00000588454.1
calreticulin
chr19_+_11071546 0.09 ENST00000358026.2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
chr8_+_92261516 0.09 ENST00000276609.3
ENST00000309536.2
solute carrier family 26 (anion exchanger), member 7
chr15_+_67841330 0.09 ENST00000354498.5
mitogen-activated protein kinase kinase 5
chrX_-_64196307 0.09 ENST00000545618.1
zinc finger, C4H2 domain containing
chr16_-_52640834 0.09 ENST00000510238.3
cancer susceptibility candidate 16 (non-protein coding)
chr4_-_103749105 0.09 ENST00000394801.4
ENST00000394804.2
ubiquitin-conjugating enzyme E2D 3
chr1_-_234667504 0.09 ENST00000421207.1
ENST00000435574.1
RP5-855F14.1
chr5_-_142780280 0.09 ENST00000424646.2
nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
chr1_-_102312517 0.09 ENST00000338858.5
olfactomedin 3
chr15_+_80351910 0.09 ENST00000261749.6
ENST00000561060.1
zinc finger, AN1-type domain 6
chr14_-_47351391 0.09 ENST00000399222.3
MAM domain containing glycosylphosphatidylinositol anchor 2
chr6_-_29399744 0.09 ENST00000377154.1
olfactory receptor, family 5, subfamily V, member 1
chrX_-_100129128 0.09 ENST00000372960.4
ENST00000372964.1
ENST00000217885.5
NADPH oxidase 1
chr12_-_56106060 0.09 ENST00000452168.2
integrin, alpha 7
chr12_-_56321649 0.09 ENST00000454792.2
ENST00000408946.2
within bgcn homolog (Drosophila)
chr7_-_99717463 0.08 ENST00000437822.2
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
chrX_-_64196351 0.08 ENST00000374839.3
zinc finger, C4H2 domain containing
chrX_+_133930798 0.08 ENST00000414371.2
family with sequence similarity 122C
chr1_+_198608146 0.08 ENST00000367376.2
ENST00000352140.3
ENST00000594404.1
ENST00000598951.1
ENST00000530727.1
ENST00000442510.2
ENST00000367367.4
ENST00000348564.6
ENST00000367364.1
ENST00000413409.2
protein tyrosine phosphatase, receptor type, C
chr12_-_32908809 0.08 ENST00000324868.8
tyrosyl-tRNA synthetase 2, mitochondrial

Network of associatons between targets according to the STRING database.

First level regulatory network of PDX1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.0 GO:0046013 regulation of T cell homeostatic proliferation(GO:0046013)
0.2 0.7 GO:1900108 negative regulation of nodal signaling pathway(GO:1900108)
0.2 1.1 GO:1903435 positive regulation of constitutive secretory pathway(GO:1903435)
0.1 0.4 GO:0036058 filtration diaphragm assembly(GO:0036058) slit diaphragm assembly(GO:0036060)
0.1 0.4 GO:1901994 meiotic cell cycle phase transition(GO:0044771) regulation of meiotic cell cycle phase transition(GO:1901993) negative regulation of meiotic cell cycle phase transition(GO:1901994)
0.1 0.7 GO:0034287 detection of carbohydrate stimulus(GO:0009730) detection of hexose stimulus(GO:0009732) detection of monosaccharide stimulus(GO:0034287) detection of glucose(GO:0051594)
0.1 0.5 GO:0015722 canalicular bile acid transport(GO:0015722)
0.1 0.3 GO:0046946 hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.1 0.6 GO:0097338 response to clozapine(GO:0097338)
0.1 1.0 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.1 0.9 GO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809) response to muscle inactivity involved in regulation of muscle adaptation(GO:0014877) response to denervation involved in regulation of muscle adaptation(GO:0014894)
0.1 0.2 GO:0090526 regulation of gluconeogenesis involved in cellular glucose homeostasis(GO:0090526)
0.1 0.6 GO:0010989 negative regulation of low-density lipoprotein particle clearance(GO:0010989) negative regulation of Golgi to plasma membrane protein transport(GO:0042997)
0.1 0.2 GO:0009946 proximal/distal axis specification(GO:0009946) neuroblast differentiation(GO:0014016)
0.1 0.4 GO:1903527 positive regulation of membrane tubulation(GO:1903527)
0.1 0.3 GO:0090402 oncogene-induced cell senescence(GO:0090402)
0.1 0.2 GO:0002881 negative regulation of chronic inflammatory response to non-antigenic stimulus(GO:0002881)
0.1 0.2 GO:0061357 positive regulation of Wnt protein secretion(GO:0061357)
0.1 0.3 GO:2000543 positive regulation of gastrulation(GO:2000543)
0.1 0.4 GO:0060665 regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665)
0.0 0.3 GO:0051799 negative regulation of hair follicle development(GO:0051799)
0.0 0.3 GO:0033353 S-adenosylmethionine cycle(GO:0033353)
0.0 0.5 GO:0030916 otic vesicle formation(GO:0030916)
0.0 0.3 GO:0006561 proline biosynthetic process(GO:0006561)
0.0 0.1 GO:0048382 mesendoderm development(GO:0048382) regulation of intracellular mRNA localization(GO:1904580) positive regulation of intracellular mRNA localization(GO:1904582)
0.0 0.3 GO:2000189 positive regulation of cholesterol homeostasis(GO:2000189)
0.0 0.3 GO:0021796 cerebral cortex regionalization(GO:0021796)
0.0 0.7 GO:0019371 cyclooxygenase pathway(GO:0019371)
0.0 0.1 GO:0014034 neural crest cell fate commitment(GO:0014034)
0.0 0.1 GO:1903674 regulation of cap-dependent translational initiation(GO:1903674) positive regulation of cap-dependent translational initiation(GO:1903676)
0.0 0.1 GO:0042271 susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)
0.0 0.3 GO:0030091 protein repair(GO:0030091)
0.0 0.3 GO:0048733 sebaceous gland development(GO:0048733)
0.0 0.4 GO:0048096 chromatin-mediated maintenance of transcription(GO:0048096)
0.0 0.1 GO:2000342 negative regulation of chemokine (C-X-C motif) ligand 2 production(GO:2000342)
0.0 0.2 GO:0009253 peptidoglycan metabolic process(GO:0000270) peptidoglycan catabolic process(GO:0009253)
0.0 0.4 GO:0033631 cell-cell adhesion mediated by integrin(GO:0033631)
0.0 0.3 GO:0048743 positive regulation of skeletal muscle fiber development(GO:0048743)
0.0 0.6 GO:0031069 hair follicle morphogenesis(GO:0031069)
0.0 0.1 GO:0045726 positive regulation of integrin biosynthetic process(GO:0045726)
0.0 0.3 GO:1900747 negative regulation of vascular endothelial growth factor signaling pathway(GO:1900747)
0.0 0.3 GO:0030202 heparin metabolic process(GO:0030202) heparin biosynthetic process(GO:0030210)
0.0 0.3 GO:0090324 negative regulation of oxidative phosphorylation(GO:0090324)
0.0 0.1 GO:0006422 aspartyl-tRNA aminoacylation(GO:0006422)
0.0 0.2 GO:0021759 globus pallidus development(GO:0021759)
0.0 0.3 GO:0070072 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.1 GO:0019236 response to pheromone(GO:0019236)
0.0 0.2 GO:0090160 Golgi to lysosome transport(GO:0090160)
0.0 0.1 GO:0007068 negative regulation of transcription during mitosis(GO:0007068) negative regulation of transcription from RNA polymerase II promoter during mitosis(GO:0007070)
0.0 0.4 GO:0089711 L-glutamate transmembrane transport(GO:0089711)
0.0 0.0 GO:0051794 catagen(GO:0042637) regulation of catagen(GO:0051794) positive regulation of catagen(GO:0051795)
0.0 0.1 GO:0042421 norepinephrine biosynthetic process(GO:0042421)
0.0 0.2 GO:1900028 negative regulation of ruffle assembly(GO:1900028)
0.0 0.5 GO:0048934 peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935)
0.0 0.3 GO:1990118 sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.0 0.1 GO:0002378 immunoglobulin biosynthetic process(GO:0002378)
0.0 0.3 GO:0007597 blood coagulation, intrinsic pathway(GO:0007597)
0.0 0.1 GO:0002501 peptide antigen assembly with MHC protein complex(GO:0002501)
0.0 0.5 GO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0016339)
0.0 0.1 GO:0021650 vestibulocochlear nerve formation(GO:0021650)
0.0 0.1 GO:0034351 regulation of glial cell apoptotic process(GO:0034350) negative regulation of glial cell apoptotic process(GO:0034351)
0.0 0.1 GO:2000074 regulation of type B pancreatic cell development(GO:2000074)
0.0 0.4 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.0 0.8 GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157)
0.0 0.4 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.3 GO:0021516 dorsal spinal cord development(GO:0021516)
0.0 0.4 GO:0021522 spinal cord motor neuron differentiation(GO:0021522)
0.0 0.1 GO:0043402 glucocorticoid mediated signaling pathway(GO:0043402)
0.0 0.3 GO:0032793 positive regulation of CREB transcription factor activity(GO:0032793)
0.0 0.0 GO:0035513 oxidative RNA demethylation(GO:0035513) oxidative single-stranded RNA demethylation(GO:0035553)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.9 GO:0014802 terminal cisterna(GO:0014802)
0.1 1.5 GO:0033093 Weibel-Palade body(GO:0033093)
0.1 0.4 GO:0071062 alphav-beta3 integrin-vitronectin complex(GO:0071062)
0.0 1.1 GO:0030057 desmosome(GO:0030057)
0.0 1.0 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.3 GO:0035985 senescence-associated heterochromatin focus(GO:0035985)
0.0 0.6 GO:0005952 cAMP-dependent protein kinase complex(GO:0005952)
0.0 0.3 GO:0098647 collagen type VI trimer(GO:0005589) collagen beaded filament(GO:0098647)
0.0 0.3 GO:0031618 nuclear pericentric heterochromatin(GO:0031618)
0.0 0.2 GO:1990316 ATG1/ULK1 kinase complex(GO:1990316)
0.0 0.2 GO:0000940 condensed chromosome outer kinetochore(GO:0000940)
0.0 0.2 GO:0032809 neuronal cell body membrane(GO:0032809) cell body membrane(GO:0044298)
0.0 0.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.1 GO:0042824 MHC class I peptide loading complex(GO:0042824)
0.0 0.1 GO:0042584 chromaffin granule membrane(GO:0042584)
0.0 0.3 GO:0030867 rough endoplasmic reticulum membrane(GO:0030867)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0004666 prostaglandin-endoperoxide synthase activity(GO:0004666)
0.1 0.5 GO:0005275 amine transmembrane transporter activity(GO:0005275)
0.1 0.3 GO:0033823 procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823)
0.1 0.7 GO:0004340 glucokinase activity(GO:0004340) hexokinase activity(GO:0004396) fructokinase activity(GO:0008865) mannokinase activity(GO:0019158)
0.1 0.4 GO:0005294 neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.1 0.7 GO:0016015 morphogen activity(GO:0016015)
0.1 0.3 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 0.2 GO:0016495 C-X3-C chemokine receptor activity(GO:0016495)
0.1 0.3 GO:0004735 pyrroline-5-carboxylate reductase activity(GO:0004735)
0.1 0.3 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 0.3 GO:0015016 [heparan sulfate]-glucosamine N-sulfotransferase activity(GO:0015016)
0.0 1.1 GO:0031489 myosin V binding(GO:0031489)
0.0 0.6 GO:0015643 toxic substance binding(GO:0015643)
0.0 0.2 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 0.6 GO:0004691 cAMP-dependent protein kinase activity(GO:0004691)
0.0 0.8 GO:0004745 retinol dehydrogenase activity(GO:0004745)
0.0 0.4 GO:0043184 vascular endothelial growth factor receptor 2 binding(GO:0043184)
0.0 0.2 GO:1990254 keratin filament binding(GO:1990254)
0.0 0.2 GO:0005134 interleukin-2 receptor binding(GO:0005134) glycosphingolipid binding(GO:0043208)
0.0 0.1 GO:0004699 calcium-independent protein kinase C activity(GO:0004699)
0.0 0.3 GO:0005005 transmembrane-ephrin receptor activity(GO:0005005)
0.0 0.6 GO:0034236 protein kinase A catalytic subunit binding(GO:0034236)
0.0 0.3 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.2 GO:0070728 leucine binding(GO:0070728)
0.0 0.1 GO:0030171 voltage-gated proton channel activity(GO:0030171)
0.0 0.3 GO:0042975 peroxisome proliferator activated receptor binding(GO:0042975)
0.0 0.4 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.0 0.1 GO:0071074 eukaryotic initiation factor eIF2 binding(GO:0071074)
0.0 0.1 GO:0038051 glucocorticoid receptor activity(GO:0004883) glucocorticoid-activated RNA polymerase II transcription factor binding transcription factor activity(GO:0038051)
0.0 0.2 GO:0031852 mu-type opioid receptor binding(GO:0031852)
0.0 0.3 GO:0008190 eukaryotic initiation factor 4E binding(GO:0008190)
0.0 0.5 GO:0019198 transmembrane receptor protein tyrosine phosphatase activity(GO:0005001) transmembrane receptor protein phosphatase activity(GO:0019198)
0.0 0.1 GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen(GO:0016715)
0.0 0.2 GO:0001161 intronic transcription regulatory region sequence-specific DNA binding(GO:0001161) intronic transcription regulatory region DNA binding(GO:0044213)
0.0 0.1 GO:0004815 aspartate-tRNA ligase activity(GO:0004815)
0.0 0.2 GO:0003796 lysozyme activity(GO:0003796)
0.0 0.3 GO:0070577 lysine-acetylated histone binding(GO:0070577)
0.0 0.2 GO:0001222 transcription corepressor binding(GO:0001222)
0.0 0.2 GO:0005522 profilin binding(GO:0005522)
0.0 0.0 GO:0035515 oxidative RNA demethylase activity(GO:0035515)
0.0 0.8 GO:0050840 extracellular matrix binding(GO:0050840)
0.0 0.1 GO:0001849 complement component C1q binding(GO:0001849)
0.0 0.5 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 1.0 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 1.4 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.4 PID ARF 3PATHWAY Arf1 pathway
0.0 0.3 SA B CELL RECEPTOR COMPLEXES Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases.
0.0 0.6 ST B CELL ANTIGEN RECEPTOR B Cell Antigen Receptor
0.0 0.5 PID P38 MK2 PATHWAY p38 signaling mediated by MAPKAP kinases
0.0 0.8 PID UPA UPAR PATHWAY Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling
0.0 0.5 PID NFKAPPAB CANONICAL PATHWAY Canonical NF-kappaB pathway
0.0 0.6 PID IL3 PATHWAY IL3-mediated signaling events
0.0 0.4 PID INTEGRIN2 PATHWAY Beta2 integrin cell surface interactions
0.0 0.8 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.1 REACTOME APOPTOTIC CLEAVAGE OF CELL ADHESION PROTEINS Genes involved in Apoptotic cleavage of cell adhesion proteins
0.0 0.3 REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION Genes involved in APOBEC3G mediated resistance to HIV-1 infection
0.0 0.5 REACTOME PASSIVE TRANSPORT BY AQUAPORINS Genes involved in Passive Transport by Aquaporins
0.0 1.1 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.0 1.0 REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS Genes involved in Regulation of gene expression in beta cells
0.0 1.2 REACTOME SIGNALING BY BMP Genes involved in Signaling by BMP
0.0 0.7 REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS Genes involved in Phosphorylation of CD3 and TCR zeta chains
0.0 0.8 REACTOME ADHERENS JUNCTIONS INTERACTIONS Genes involved in Adherens junctions interactions
0.0 0.3 REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN Genes involved in Platelet Adhesion to exposed collagen
0.0 0.4 REACTOME IL 7 SIGNALING Genes involved in Interleukin-7 signaling
0.0 0.6 REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis
0.0 0.6 REACTOME TIGHT JUNCTION INTERACTIONS Genes involved in Tight junction interactions
0.0 0.5 REACTOME EFFECTS OF PIP2 HYDROLYSIS Genes involved in Effects of PIP2 hydrolysis
0.0 0.3 REACTOME CS DS DEGRADATION Genes involved in CS/DS degradation
0.0 0.2 REACTOME THE ACTIVATION OF ARYLSULFATASES Genes involved in The activation of arylsulfatases
0.0 0.4 REACTOME BASIGIN INTERACTIONS Genes involved in Basigin interactions