Mucociliary differentiation, bronchial epithelial cells, human (Ross 2007)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
SOX5 | hg19_v2_chr12_-_24102576_24102637 | -0.17 | 3.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_165675197 Show fit | 6.02 |
ENST00000515485.1
|
RP11-294O2.2 |
|
chr6_-_32557610 Show fit | 5.62 |
ENST00000360004.5
|
major histocompatibility complex, class II, DR beta 1 |
|
chr7_-_16921601 Show fit | 5.46 |
ENST00000402239.3
ENST00000310398.2 ENST00000414935.1 |
anterior gradient 3 |
|
chr4_+_165675269 Show fit | 4.93 |
ENST00000507311.1
|
RP11-294O2.2 |
|
chr19_+_55888186 Show fit | 4.84 |
ENST00000291934.3
|
transmembrane protein 190 |
|
chr15_+_71228826 Show fit | 4.83 |
ENST00000558456.1
ENST00000560158.2 ENST00000558808.1 ENST00000559806.1 ENST00000559069.1 |
leucine rich repeat containing 49 |
|
chr3_-_19988462 Show fit | 4.40 |
ENST00000344838.4
|
EF-hand domain family, member B |
|
chr3_+_181429704 Show fit | 4.25 |
ENST00000431565.2
ENST00000325404.1 |
SRY (sex determining region Y)-box 2 |
|
chr20_-_3762087 Show fit | 4.24 |
ENST00000379756.3
|
sperm flagellar 1 |
|
chrY_+_15016013 Show fit | 3.95 |
ENST00000360160.4
ENST00000454054.1 |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 7.3 | GO:0048251 | elastic fiber assembly(GO:0048251) |
1.1 | 5.6 | GO:0002399 | MHC class II protein complex assembly(GO:0002399) |
0.7 | 5.6 | GO:2000980 | regulation of auditory receptor cell differentiation(GO:0045607) regulation of mechanoreceptor differentiation(GO:0045631) regulation of inner ear receptor cell differentiation(GO:2000980) |
0.0 | 5.2 | GO:0006367 | transcription initiation from RNA polymerase II promoter(GO:0006367) |
0.1 | 5.1 | GO:0048384 | retinoic acid receptor signaling pathway(GO:0048384) |
0.0 | 5.0 | GO:0000910 | cytokinesis(GO:0000910) |
0.2 | 4.5 | GO:1904886 | beta-catenin destruction complex disassembly(GO:1904886) |
0.3 | 4.3 | GO:0038203 | TORC2 signaling(GO:0038203) |
0.2 | 4.2 | GO:0021781 | glial cell fate commitment(GO:0021781) |
0.6 | 3.8 | GO:0007352 | zygotic specification of dorsal/ventral axis(GO:0007352) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.2 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.7 | 7.3 | GO:0071953 | elastic fiber(GO:0071953) |
0.3 | 5.6 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.1 | 5.3 | GO:0031463 | Cul3-RING ubiquitin ligase complex(GO:0031463) |
0.1 | 4.9 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.0 | 4.9 | GO:0005667 | transcription factor complex(GO:0005667) |
1.0 | 4.8 | GO:0002079 | inner acrosomal membrane(GO:0002079) |
0.2 | 4.3 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 4.0 | GO:0097014 | axoneme(GO:0005930) ciliary plasm(GO:0097014) |
0.4 | 3.5 | GO:0036056 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.7 | GO:0008022 | protein C-terminus binding(GO:0008022) |
0.1 | 5.8 | GO:0043621 | protein self-association(GO:0043621) |
0.2 | 5.6 | GO:0023026 | MHC class II protein complex binding(GO:0023026) |
0.2 | 5.5 | GO:0002162 | dystroglycan binding(GO:0002162) |
0.4 | 5.3 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.0 | 5.1 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.2 | 4.2 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
0.2 | 4.2 | GO:0035198 | miRNA binding(GO:0035198) |
0.0 | 3.5 | GO:0003714 | transcription corepressor activity(GO:0003714) |
0.3 | 2.9 | GO:0015321 | sodium-dependent phosphate transmembrane transporter activity(GO:0015321) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.1 | 6.3 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.1 | 5.4 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 5.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 4.9 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 2.8 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.0 | 2.8 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.8 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 2.1 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.0 | 2.1 | PID AURORA B PATHWAY | Aurora B signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.9 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.2 | 5.6 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |
0.1 | 4.7 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.2 | 4.5 | REACTOME CTNNB1 PHOSPHORYLATION CASCADE | Genes involved in Beta-catenin phosphorylation cascade |
0.0 | 4.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 3.6 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 2.2 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 2.0 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.1 | 1.9 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.0 | 1.5 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |