hg19_v2_chr6_-_132272504_132272519	1.21425	AAGGUGC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr4_+_55524085_55524110	0.948747	AAGGUGC	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr6_+_112408768_112408894	0.642966	AAGGUGC	ENST00000368656.2|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B 	ENST00000604268.1|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B
hg19_v2_chr6_+_39760783_39760796	0.596132	AAGGUGC	ENST00000398904.2|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2 	ENST00000538976.1|DAAM2|ENSG00000146122.12|dishevelled associated activator of morphogenesis 2
hg19_v2_chr12_+_104458235_104458344	0.534736	AAGGUGC	ENST00000229330.4|HCFC2|ENSG00000111727.7|host cell factor C2
hg19_v2_chr15_-_61521495_61521518	0.496298	AAGGUGC	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr9_-_35563896_35563911	0.49011	AAGGUGC	ENST00000399742.2|FAM166B|ENSG00000215187.5|family with sequence similarity 166, member B
hg19_v2_chr12_+_12764773_12764852	0.390303	AAGGUGC	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr9_-_74383799_74383818	0.349206	AAGGUGC	ENST00000377044.4|TMEM2|ENSG00000135048.9|transmembrane protein 2
hg19_v2_chr11_-_108464321_108464380	0.331264	AAGGUGC	ENST00000265843.4|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr3_-_123603137_123603203	0.326772	AAGGUGC	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr3_-_114790179_114790222	0.28494	AAGGUGC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr13_-_77601282_77601308	0.274642	AAGGUGC	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr5_+_56111361_56111403	0.267481	AAGGUGC	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chrX_+_150565653_150565694	0.253708	AAGGUGC	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr16_+_69599861_69599887	0.252916	AAGGUGC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr2_+_12857015_12857041	0.21056	AAGGUGC	ENST00000155926.4|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr5_-_73937244_73937274	0.20145	AAGGUGC	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr1_+_87794150_87794172	0.200986	AAGGUGC	ENST00000370544.5|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr2_+_24714729_24714927	0.20042	AAGGUGC	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr6_-_107436473_107436543	0.200273	AAGGUGC	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr11_+_108093839_108093850	0.197142	AAGGUGC	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr12_+_69864129_69864222	0.195311	AAGGUGC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr18_-_45456930_45456970	0.192405	AAGGUGC	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr17_-_27621125_27621143	0.173498	AAGGUGC	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr3_+_187930719_187930729	0.172991	AAGGUGC	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr11_-_130184555_130184581	0.163835	AAGGUGC	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr9_+_96338860_96338939	0.155364	AAGGUGC	ENST00000375376.4|PHF2|ENSG00000197724.6|PHD finger protein 2
hg19_v2_chr1_+_38259540_38259569	0.14676	AAGGUGC	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr1_+_162467595_162467655	0.139903	AAGGUGC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr2_-_26101374_26101389	0.139312	AAGGUGC	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr2_+_36582857_36583069	0.137526	AAGGUGC	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr20_+_49348081_49348096	0.13724	AAGGUGC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr16_+_28996114_28996166	0.135375	AAGGUGC	ENST00000395461.3|LAT|ENSG00000213658.6|linker for activation of T cells
hg19_v2_chr5_-_180288248_180288291	0.135258	AAGGUGC	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr7_+_90225796_90225811	0.133882	AAGGUGC	ENST00000380050.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr17_+_68165657_68165688	0.132472	AAGGUGC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr3_+_105085734_105085760	0.130732	AAGGUGC	ENST00000306107.5|ALCAM|ENSG00000170017.8|activated leukocyte cell adhesion molecule
hg19_v2_chr16_+_71879861_71879927	0.130424	AAGGUGC	ENST00000427980.2|ATXN1L|ENSG00000224470.3|ataxin 1-like 	ENST00000568581.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr10_+_133918175_133918175	0.130416	AAGGUGC	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr6_+_122720681_122720713	0.128461	AAGGUGC	ENST00000368455.4|HSF2|ENSG00000025156.8|heat shock transcription factor 2 	ENST00000452194.1|HSF2|ENSG00000025156.8|heat shock transcription factor 2
hg19_v2_chr12_-_56652111_56652183	0.126418	AAGGUGC	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr11_-_72853091_72853151	0.124453	AAGGUGC	ENST00000311172.7|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2 	ENST00000409314.1|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2
hg19_v2_chr6_-_86352642_86352709	0.119237	AAGGUGC	ENST00000355238.6|SYNCRIP|ENSG00000135316.13|synaptotagmin binding, cytoplasmic RNA interacting protein
hg19_v2_chr10_+_111767720_111767752	0.110593	AAGGUGC	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chrX_-_24045303_24045303	0.102893	AAGGUGC	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr1_-_204329013_204329086	0.102685	AAGGUGC	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr17_+_40834580_40834633	0.101543	AAGGUGC	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr12_+_11802753_11802834	0.100841	AAGGUGC	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr16_-_57219966_57220028	0.0981617	AAGGUGC	ENST00000565760.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000309137.8|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000570184.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000562324.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A
hg19_v2_chr9_+_108424738_108424738	0.0981377	AAGGUGC	ENST00000334077.3|TAL2|ENSG00000186051.4|T-cell acute lymphocytic leukemia 2
hg19_v2_chr7_-_100287071_100287071	0.0975479	AAGGUGC	ENST00000275732.5|GIGYF1|ENSG00000146830.9|GRB10 interacting GYF protein 1
hg19_v2_chr7_+_66386204_66386249	0.0972507	AAGGUGC	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr1_-_70820357_70820435	0.096002	AAGGUGC	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr15_+_76629064_76629073	0.0959315	AAGGUGC	ENST00000290759.4|ISL2|ENSG00000159556.5|ISL LIM homeobox 2
hg19_v2_chr1_+_26737253_26737269	0.0952427	AAGGUGC	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr2_+_46926048_46926095	0.0943705	AAGGUGC	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr22_+_40573921_40573946	0.0930697	AAGGUGC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr12_+_54943134_54943182	0.0925839	AAGGUGC	ENST00000243052.3|PDE1B|ENSG00000123360.7|phosphodiesterase 1B, calmodulin-dependent
hg19_v2_chr17_-_7382834_7382855	0.0917938	AAGGUGC	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr21_-_36260980_36261011	0.0790427	AAGGUGC	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr21_-_40685477_40685496	0.0766385	AAGGUGC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr1_-_51425902_51425976	0.076159	AAGGUGC	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr3_+_152017181_152017229	0.0758548	AAGGUGC	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr9_-_99180597_99180614	0.0743822	AAGGUGC	ENST00000375256.4|ZNF367|ENSG00000165244.6|zinc finger protein 367
hg19_v2_chr9_-_93405352_93405386	0.073648	AAGGUGC	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr6_+_138188551_138188719	0.0708491	AAGGUGC	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr20_+_60697480_60697583	0.0707263	AAGGUGC	ENST00000370915.1|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000253001.4|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000400318.2|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279068.6|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279069.7|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr16_+_77822427_77822469	0.0672005	AAGGUGC	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr4_+_154125565_154125626	0.0667892	AAGGUGC	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr1_-_55680762_55680786	0.0655564	AAGGUGC	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr20_+_30865429_30865480	0.0648149	AAGGUGC	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr4_+_6784401_6784510	0.0639551	AAGGUGC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr5_-_139422654_139422898	0.0622166	AAGGUGC	ENST00000289409.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000358522.3|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000378238.4|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000289422.7|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000361474.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000545385.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000394770.1|NRG2|ENSG00000158458.15|neuregulin 2 	ENST00000541337.1|NRG2|ENSG00000158458.15|neuregulin 2
hg19_v2_chr6_-_37665751_37665781	0.0595348	AAGGUGC	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr20_+_43104508_43104540	0.0559429	AAGGUGC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chrX_-_19905703_19905724	0.05544	AAGGUGC	ENST00000397821.3|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr4_-_125633876_125633897	0.0546452	AAGGUGC	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr1_-_110052302_110052380	0.0544605	AAGGUGC	ENST00000369864.4|AMIGO1|ENSG00000181754.6|adhesion molecule with Ig-like domain 1 	ENST00000369862.1|AMIGO1|ENSG00000181754.6|adhesion molecule with Ig-like domain 1
hg19_v2_chr17_+_27717415_27717618	0.0495099	AAGGUGC	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr18_-_29522989_29523104	0.0482835	AAGGUGC	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr21_-_18985158_18985226	0.0479303	AAGGUGC	ENST00000339775.6|BTG3|ENSG00000154640.10|BTG family, member 3
hg19_v2_chr4_-_42659102_42659161	0.0477846	AAGGUGC	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr12_+_94542459_94542513	0.0441715	AAGGUGC	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr10_+_72575643_72575753	0.0406719	AAGGUGC	ENST00000373202.3|SGPL1|ENSG00000166224.12|sphingosine-1-phosphate lyase 1
hg19_v2_chr10_+_102295616_102295713	0.0381638	AAGGUGC	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr7_-_121036337_121036429	0.0375021	AAGGUGC	ENST00000426156.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000359943.3|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000412653.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C
hg19_v2_chr4_+_79697495_79697538	0.0368226	AAGGUGC	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr8_+_28747884_28747938	0.0359813	AAGGUGC	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr15_+_73344791_73344900	0.0350433	AAGGUGC	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr11_-_79151695_79151710	0.0333882	AAGGUGC	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr9_+_125703282_125703337	0.0332438	AAGGUGC	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr1_-_228135599_228135640	0.0332213	AAGGUGC	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr2_+_85198216_85198305	0.0328001	AAGGUGC	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr3_+_37903432_37903475	0.0314039	AAGGUGC	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr9_+_91003271_91003386	0.0304504	AAGGUGC	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr12_+_5019061_5019078	0.0303914	AAGGUGC	ENST00000382545.3|KCNA1|ENSG00000111262.4|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)
hg19_v2_chr5_+_125935960_125935960	0.0298026	AAGGUGC	ENST00000297540.4|PHAX|ENSG00000164902.9|phosphorylated adaptor for RNA export
hg19_v2_chr3_-_169899504_169899542	0.0290131	AAGGUGC	ENST00000474275.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000484931.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000494943.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000497658.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000465896.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000475729.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000495893.2|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000481639.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000467570.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila) 	ENST00000466189.1|PHC3|ENSG00000173889.11|polyhomeotic homolog 3 (Drosophila)
hg19_v2_chr3_-_33481835_33481905	0.0271259	AAGGUGC	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr2_-_201828356_201828412	0.0263344	AAGGUGC	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr1_+_62208091_62208182	0.0260996	AAGGUGC	ENST00000316485.6|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000371158.2|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr8_-_145701718_145701718	0.025704	AAGGUGC	ENST00000377317.4|FOXH1|ENSG00000160973.7|forkhead box H1
hg19_v2_chr1_+_167190066_167190156	0.0256548	AAGGUGC	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr11_+_109964087_109964123	0.022997	AAGGUGC	ENST00000278590.3|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr5_+_122424816_122424944	0.0227701	AAGGUGC	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chr6_+_134274322_134274342	0.0198137	AAGGUGC	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr1_-_109506036_109506129	0.0181178	AAGGUGC	ENST00000369976.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000356970.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000357393.4|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000369971.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000415331.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1
hg19_v2_chr2_-_206950781_206950947	0.016403	AAGGUGC	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr20_+_277737_277737	0.016242	AAGGUGC	ENST00000382352.3|ZCCHC3|ENSG00000177764.6|zinc finger, CCHC domain containing 3
hg19_v2_chr10_-_71930222_71930280	0.0153984	AAGGUGC	ENST00000458634.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373239.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373242.2|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae) 	ENST00000373241.4|SAR1A|ENSG00000079332.10|SAR1 homolog A (S. cerevisiae)
hg19_v2_chr1_-_57889687_57889754	0.0149929	AAGGUGC	ENST00000371236.2|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila) 	ENST00000371230.1|DAB1|ENSG00000173406.11|Dab, reelin signal transducer, homolog 1 (Drosophila)
hg19_v2_chr3_+_141205852_141205929	0.0144296	AAGGUGC	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr10_-_81205373_81205429	0.0126369	AAGGUGC	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chrX_+_108780062_108780105	0.012427	AAGGUGC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr5_-_59189545_59189625	0.0124249	AAGGUGC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr9_-_127952032_127952098	0.0118502	AAGGUGC	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr5_+_96271141_96271168	0.0115343	AAGGUGC	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr12_-_56583332_56583369	0.0114943	AAGGUGC	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr3_+_43328004_43328095	0.0103023	AAGGUGC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr20_+_43595115_43595220	0.00830207	AAGGUGC	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr1_+_22379120_22379177	0.00824972	AAGGUGC	ENST00000400259.1|CDC42|ENSG00000070831.11|cell division cycle 42 	ENST00000344548.3|CDC42|ENSG00000070831.11|cell division cycle 42
hg19_v2_chr18_+_20513782_20513859	0.00789905	AAGGUGC	ENST00000399722.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399725.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000399721.2|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8 	ENST00000583594.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr10_-_119806085_119806114	0.00662697	AAGGUGC	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr3_+_42695176_42695201	0.00652712	AAGGUGC	ENST00000232974.6|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47 	ENST00000457842.3|ZBTB47|ENSG00000114853.9|zinc finger and BTB domain containing 47
hg19_v2_chr6_+_16238786_16238854	0.00370046	AAGGUGC	ENST00000259727.4|GMPR|ENSG00000137198.5|guanosine monophosphate reductase
hg19_v2_chr7_-_44924939_44924993	0.00310242	AAGGUGC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr16_-_85722530_85722615	0.00120519	AAGGUGC	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
