hg19_v2_chr14_-_90085458_90085557	0.477888	GGAAGAC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr11_-_115375107_115375283	0.4737	GGAAGAC	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr1_-_217262969_217262995	0.375189	GGAAGAC	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr13_-_110438914_110438937	0.355592	GGAAGAC	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr5_-_111093406_111093458	0.339931	GGAAGAC	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr3_-_18466787_18466861	0.329659	GGAAGAC	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr13_+_115079949_115080022	0.311658	GGAAGAC	ENST00000361283.1|CHAMP1|ENSG00000198824.4|chromosome alignment maintaining phosphoprotein 1
hg19_v2_chr1_+_162351503_162351523	0.309831	GGAAGAC	ENST00000458626.2|C1orf226|ENSG00000239887.3|chromosome 1 open reading frame 226
hg19_v2_chr17_+_68165657_68165688	0.306529	GGAAGAC	ENST00000243457.3|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr19_+_45504688_45504782	0.296993	GGAAGAC	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr1_+_61547894_61547980	0.294073	GGAAGAC	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr18_-_53255766_53255860	0.285976	GGAAGAC	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr20_-_33460621_33460668	0.274734	GGAAGAC	ENST00000427420.1|GGT7|ENSG00000131067.12|gamma-glutamyltransferase 7 	ENST00000336431.5|GGT7|ENSG00000131067.12|gamma-glutamyltransferase 7
hg19_v2_chr17_+_29718642_29718656	0.247362	GGAAGAC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr11_-_73309228_73309257	0.242708	GGAAGAC	ENST00000356467.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A 	ENST00000064778.4|FAM168A|ENSG00000054965.6|family with sequence similarity 168, member A
hg19_v2_chr3_+_29322803_29322850	0.240058	GGAAGAC	ENST00000396583.3|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3 	ENST00000383767.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr14_-_70883708_70883819	0.235039	GGAAGAC	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr15_+_44719394_44719579	0.2254	GGAAGAC	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chrX_+_108780062_108780105	0.221496	GGAAGAC	ENST00000372106.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr7_-_75368248_75368265	0.221217	GGAAGAC	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr3_+_45636219_45636351	0.218255	GGAAGAC	ENST00000273317.4|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chr1_+_110082487_110082535	0.217563	GGAAGAC	ENST00000527748.1|GPR61|ENSG00000156097.8|G protein-coupled receptor 61
hg19_v2_chr4_+_72204755_72204778	0.212967	GGAAGAC	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr7_+_77325738_77325789	0.210331	GGAAGAC	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr12_-_56727487_56727533	0.209351	GGAAGAC	ENST00000548043.1|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae) 	ENST00000425394.2|PAN2|ENSG00000135473.10|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr20_+_5986727_5986755	0.206309	GGAAGAC	ENST00000378863.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr5_+_137688285_137688429	0.205555	GGAAGAC	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr19_+_10527449_10527619	0.204406	GGAAGAC	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr2_-_97535708_97535843	0.198523	GGAAGAC	ENST00000305476.5|SEMA4C|ENSG00000168758.6|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
hg19_v2_chr8_+_107670064_107670132	0.19602	GGAAGAC	ENST00000312046.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr1_-_46598284_46598356	0.190703	GGAAGAC	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr1_+_118148556_118148681	0.189163	GGAAGAC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr1_+_229440129_229440129	0.183857	GGAAGAC	ENST00000366688.3|SPHAR|ENSG00000213029.2|S-phase response (cyclin related)
hg19_v2_chr4_+_184826418_184826522	0.18361	GGAAGAC	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr4_+_129730779_129730826	0.182561	GGAAGAC	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr19_-_47616992_47617011	0.178024	GGAAGAC	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr7_-_10979750_10979883	0.17546	GGAAGAC	ENST00000339600.5|NDUFA4|ENSG00000189043.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa
hg19_v2_chr1_+_89990431_89990493	0.174813	GGAAGAC	ENST00000330947.2|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B 	ENST00000358200.4|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr3_-_12705600_12705725	0.170711	GGAAGAC	ENST00000542177.1|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000442415.2|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1 	ENST00000251849.4|RAF1|ENSG00000132155.7|v-raf-1 murine leukemia viral oncogene homolog 1
hg19_v2_chr10_+_92980517_92980550	0.16579	GGAAGAC	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr5_-_59189545_59189625	0.165391	GGAAGAC	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr15_+_57210818_57210930	0.161295	GGAAGAC	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr20_-_3996036_3996153	0.159818	GGAAGAC	ENST00000336095.6|RNF24|ENSG00000101236.12|ring finger protein 24
hg19_v2_chr11_+_45868957_45869044	0.145356	GGAAGAC	ENST00000443527.2|CRY2|ENSG00000121671.7|cryptochrome 2 (photolyase-like)
hg19_v2_chr3_-_88108192_88108203	0.145206	GGAAGAC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr8_+_26435359_26435426	0.144019	GGAAGAC	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr7_+_139026057_139026130	0.142092	GGAAGAC	ENST00000541515.3|LUC7L2|ENSG00000269955.2|LUC7-like 2 (S. cerevisiae)
hg19_v2_chr18_+_9136758_9136852	0.138563	GGAAGAC	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr9_+_104296122_104296161	0.135202	GGAAGAC	ENST00000389120.3|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr7_+_138818490_138818541	0.130291	GGAAGAC	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr1_+_184356188_184356200	0.129418	GGAAGAC	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr9_-_123476719_123476810	0.123878	GGAAGAC	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr7_-_35734730_35734777	0.123689	GGAAGAC	ENST00000396081.1|HERPUD2|ENSG00000122557.5|HERPUD family member 2 	ENST00000311350.3|HERPUD2|ENSG00000122557.5|HERPUD family member 2
hg19_v2_chr17_+_5390220_5390247	0.117177	GGAAGAC	ENST00000381165.3|MIS12|ENSG00000167842.11|MIS12 kinetochore complex component
hg19_v2_chr6_-_16761678_16761721	0.108763	GGAAGAC	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr12_+_122150646_122150719	0.107894	GGAAGAC	ENST00000449592.2|TMEM120B|ENSG00000188735.8|transmembrane protein 120B
hg19_v2_chr2_-_213403565_213403584	0.107276	GGAAGAC	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr11_-_65816591_65816654	0.10574	GGAAGAC	ENST00000312006.4|GAL3ST3|ENSG00000175229.6|galactose-3-O-sulfotransferase 3
hg19_v2_chr19_-_2721412_2721419	0.105509	GGAAGAC	ENST00000323469.4|DIRAS1|ENSG00000176490.4|DIRAS family, GTP-binding RAS-like 1
hg19_v2_chr5_+_158690089_158690089	0.10391	GGAAGAC	ENST00000296786.6|UBLCP1|ENSG00000164332.6|ubiquitin-like domain containing CTD phosphatase 1
hg19_v2_chr18_-_45663666_45663732	0.10214	GGAAGAC	ENST00000535628.2|ZBTB7C|ENSG00000184828.5|zinc finger and BTB domain containing 7C
hg19_v2_chr17_-_16118835_16118867	0.0998366	GGAAGAC	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr17_-_56406117_56406165	0.0986102	GGAAGAC	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr4_-_99851766_99851788	0.0975197	GGAAGAC	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr1_+_27561007_27561061	0.0914649	GGAAGAC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr12_+_1929421_1929441	0.085315	GGAAGAC	ENST00000543818.1|LRTM2|ENSG00000166159.6|leucine-rich repeats and transmembrane domains 2
hg19_v2_chr2_-_161350305_161350391	0.0849204	GGAAGAC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr10_-_94333784_94333860	0.0825449	GGAAGAC	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr1_+_28995231_28995250	0.0823757	GGAAGAC	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr8_-_57123815_57123867	0.0787072	GGAAGAC	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr1_+_231297798_231297858	0.0778229	GGAAGAC	ENST00000444294.3|TRIM67|ENSG00000119283.11|tripartite motif containing 67
hg19_v2_chr1_-_95392635_95392834	0.0772535	GGAAGAC	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr12_+_60083118_60083157	0.0771977	GGAAGAC	ENST00000261187.4|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000543448.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr12_-_58240470_58240522	0.0771086	GGAAGAC	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr11_-_46142948_46143043	0.0766754	GGAAGAC	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr3_-_52931557_52931623	0.0762823	GGAAGAC	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr1_+_206557366_206557368	0.0762508	GGAAGAC	ENST00000414007.1|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2 	ENST00000419187.2|SRGAP2|ENSG00000163486.8|SLIT-ROBO Rho GTPase activating protein 2
hg19_v2_chr1_-_114355083_114355123	0.0728353	GGAAGAC	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr2_+_75185619_75185803	0.072586	GGAAGAC	ENST00000483063.1|POLE4|ENSG00000115350.7|polymerase (DNA-directed), epsilon 4, accessory subunit
hg19_v2_chr10_+_72164135_72164135	0.0718436	GGAAGAC	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr12_-_46766577_46766650	0.0711405	GGAAGAC	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr14_-_31495569_31495636	0.0704237	GGAAGAC	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr20_+_30946106_30946168	0.0680757	GGAAGAC	ENST00000375687.4|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila) 	ENST00000542461.1|ASXL1|ENSG00000171456.12|additional sex combs like 1 (Drosophila)
hg19_v2_chrX_+_150565653_150565694	0.0675607	GGAAGAC	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr7_+_75831181_75831236	0.0666329	GGAAGAC	ENST00000388802.4|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3 	ENST00000326382.8|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3
hg19_v2_chrX_+_70752917_70752933	0.0657976	GGAAGAC	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr3_-_125094093_125094198	0.0632551	GGAAGAC	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr2_-_152955537_152955593	0.0619405	GGAAGAC	ENST00000201943.5|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit 	ENST00000539935.1|CACNB4|ENSG00000182389.14|calcium channel, voltage-dependent, beta 4 subunit
hg19_v2_chr16_+_67143880_67144050	0.0587577	GGAAGAC	ENST00000219139.3|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70 	ENST00000566026.1|C16orf70|ENSG00000125149.7|chromosome 16 open reading frame 70
hg19_v2_chr21_+_35445827_35445886	0.0583961	GGAAGAC	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr6_-_134639180_134639220	0.0569548	GGAAGAC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr16_-_18937726_18937776	0.056589	GGAAGAC	ENST00000389467.3|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase 	ENST00000446231.2|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr20_-_50159198_50159299	0.0556086	GGAAGAC	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr16_+_15068955_15068991	0.0555753	GGAAGAC	ENST00000396410.4|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000569715.1|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000450288.2|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1
hg19_v2_chr10_-_112064665_112064737	0.0555089	GGAAGAC	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr3_-_15901278_15901354	0.0541713	GGAAGAC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chr12_+_56661033_56661115	0.0535487	GGAAGAC	ENST00000433805.2|COQ10A|ENSG00000135469.9|coenzyme Q10 homolog A (S. cerevisiae)
hg19_v2_chr19_+_3359561_3359681	0.051834	GGAAGAC	ENST00000589123.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000346156.5|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000395111.3|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor) 	ENST00000586919.1|NFIC|ENSG00000141905.13|nuclear factor I/C (CCAAT-binding transcription factor)
hg19_v2_chr12_-_14133053_14133159	0.0511258	GGAAGAC	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr3_-_112360116_112360153	0.0493549	GGAAGAC	ENST00000206423.3|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80 	ENST00000439685.2|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr7_-_139876812_139876860	0.0460993	GGAAGAC	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr2_-_242212227_242212301	0.0459227	GGAAGAC	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr10_-_98945677_98945729	0.0444242	GGAAGAC	ENST00000266058.4|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila) 	ENST00000371041.3|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chr5_+_31532373_31532479	0.0440263	GGAAGAC	ENST00000325366.9|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000355907.3|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000507818.2|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22
hg19_v2_chr1_+_162467595_162467655	0.0435666	GGAAGAC	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr3_-_133969437_133969670	0.0422529	GGAAGAC	ENST00000460933.1|RYK|ENSG00000163785.8|receptor-like tyrosine kinase 	ENST00000296084.4|RYK|ENSG00000163785.8|receptor-like tyrosine kinase
hg19_v2_chr3_+_142720366_142720475	0.0418837	GGAAGAC	ENST00000493782.1|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000397933.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000473835.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing 	ENST00000493598.2|U2SURP|ENSG00000163714.13|U2 snRNP-associated SURP domain containing
hg19_v2_chr12_+_53774423_53774658	0.0418116	GGAAGAC	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr12_+_65563329_65563373	0.0413416	GGAAGAC	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr10_-_70287231_70287290	0.0407103	GGAAGAC	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr10_+_121652204_121652286	0.0401735	GGAAGAC	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chr7_-_44924939_44924993	0.0399914	GGAAGAC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr11_+_85956182_85956289	0.039071	GGAAGAC	ENST00000327320.4|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000351625.6|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000534595.1|EED|ENSG00000074266.13|embryonic ectoderm development
hg19_v2_chr17_+_25799008_25799036	0.0389783	GGAAGAC	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr13_+_27131887_27131899	0.0386766	GGAAGAC	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr3_-_113415441_113415500	0.0383779	GGAAGAC	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chr10_-_46167722_46167926	0.0378634	GGAAGAC	ENST00000374366.3|ZFAND4|ENSG00000172671.15|zinc finger, AN1-type domain 4 	ENST00000344646.5|ZFAND4|ENSG00000172671.15|zinc finger, AN1-type domain 4
hg19_v2_chr3_-_114790179_114790222	0.0369557	GGAAGAC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr1_+_206643787_206643803	0.035882	GGAAGAC	ENST00000367120.3|IKBKE|ENSG00000143466.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
hg19_v2_chr3_+_112280857_112280901	0.0358713	GGAAGAC	ENST00000492406.1|SLC35A5|ENSG00000138459.4|solute carrier family 35, member A5 	ENST00000468642.1|SLC35A5|ENSG00000138459.4|solute carrier family 35, member A5
hg19_v2_chr4_+_71768043_71768095	0.0325496	GGAAGAC	ENST00000502869.1|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000309395.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B 	ENST00000396051.2|MOB1B|ENSG00000173542.4|MOB kinase activator 1B
hg19_v2_chr2_-_201936302_201936416	0.0319066	GGAAGAC	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr5_+_61874562_61874685	0.0285482	GGAAGAC	ENST00000334994.5|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70 	ENST00000409534.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr1_+_36348790_36348822	0.027835	GGAAGAC	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr16_-_12009735_12009793	0.0269664	GGAAGAC	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr14_-_92506371_92506418	0.0265667	GGAAGAC	ENST00000267622.4|TRIP11|ENSG00000100815.8|thyroid hormone receptor interactor 11
hg19_v2_chr1_+_229406847_229406935	0.0264714	GGAAGAC	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chr6_-_3457256_3457292	0.0262939	GGAAGAC	ENST00000436008.2|SLC22A23|ENSG00000137266.10|solute carrier family 22, member 23
hg19_v2_chr16_+_69599861_69599887	0.0256556	GGAAGAC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr13_+_48877895_48877929	0.0255049	GGAAGAC	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr2_+_178257372_178257523	0.0251845	GGAAGAC	ENST00000264167.4|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase 	ENST00000409888.1|AGPS|ENSG00000018510.8|alkylglycerone phosphate synthase
hg19_v2_chr19_+_54412517_54412589	0.0247958	GGAAGAC	ENST00000391767.1|CACNG7|ENSG00000105605.3|calcium channel, voltage-dependent, gamma subunit 7
hg19_v2_chr11_-_18656028_18656040	0.0245698	GGAAGAC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr19_-_36523709_36523796	0.0240964	GGAAGAC	ENST00000592017.1|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3 	ENST00000360535.4|CLIP3|ENSG00000105270.10|CAP-GLY domain containing linker protein 3
hg19_v2_chrX_+_40944871_40944888	0.0239839	GGAAGAC	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr17_+_40985407_40985513	0.023937	GGAAGAC	ENST00000586114.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000590720.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000585805.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000541124.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000441946.2|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000591152.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000589469.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000293362.3|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki) 	ENST00000592169.1|PSME3|ENSG00000131467.6|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
hg19_v2_chr19_+_19431490_19431795	0.0235544	GGAAGAC	ENST00000392313.6|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000262815.8|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor 	ENST00000609122.1|MAU2|ENSG00000129933.16|MAU2 sister chromatid cohesion factor
hg19_v2_chr5_-_45696253_45696427	0.0226288	GGAAGAC	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr1_-_115053781_115053853	0.0208536	GGAAGAC	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chr3_-_195270162_195270209	0.0207767	GGAAGAC	ENST00000438848.1|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2 	ENST00000328432.3|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v2_chr15_+_77712993_77713081	0.0205255	GGAAGAC	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr10_-_88281494_88281572	0.0203539	GGAAGAC	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr12_-_95467356_95467479	0.0199853	GGAAGAC	ENST00000393101.3|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1 	ENST00000333003.5|NR2C1|ENSG00000120798.12|nuclear receptor subfamily 2, group C, member 1
hg19_v2_chr16_+_3355472_3355514	0.0189657	GGAAGAC	ENST00000574298.1|ZNF75A|ENSG00000162086.10|zinc finger protein 75a
hg19_v2_chr8_-_145559943_145559943	0.0187927	GGAAGAC	ENST00000332135.4|SCRT1|ENSG00000170616.9|scratch family zinc finger 1
hg19_v2_chr1_-_207224307_207224422	0.0186845	GGAAGAC	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr21_-_40685477_40685496	0.0186775	GGAAGAC	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr17_+_28804380_28804460	0.0173963	GGAAGAC	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr1_-_35325400_35325431	0.0173878	GGAAGAC	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr6_-_107436473_107436543	0.0169535	GGAAGAC	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr1_+_43855560_43855640	0.0163947	GGAAGAC	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr20_+_3451650_3451729	0.0163273	GGAAGAC	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr12_-_49449107_49449107	0.0158969	GGAAGAC	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr1_-_153895377_153895465	0.0153823	GGAAGAC	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr14_+_73603126_73603255	0.0151011	GGAAGAC	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr5_+_17217669_17217718	0.0147562	GGAAGAC	ENST00000322611.3|BASP1|ENSG00000176788.7|brain abundant, membrane attached signal protein 1
hg19_v2_chr13_-_72441315_72441454	0.0146991	GGAAGAC	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr13_+_80055284_80055295	0.0142599	GGAAGAC	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr11_-_70507901_70507958	0.0141957	GGAAGAC	ENST00000449833.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000357171.3|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2 	ENST00000449116.2|SHANK2|ENSG00000162105.12|SH3 and multiple ankyrin repeat domains 2
hg19_v2_chr4_-_114682936_114683083	0.0140586	GGAAGAC	ENST00000454265.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000429180.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000418639.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000394526.2|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta 	ENST00000296402.5|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr4_-_103748880_103749047	0.0137867	GGAAGAC	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr11_-_62521614_62521660	0.0136406	GGAAGAC	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr9_-_14314066_14314075	0.0134641	GGAAGAC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr8_+_87354945_87355012	0.013133	GGAAGAC	ENST00000517970.1|WWP1|ENSG00000123124.9|WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr5_+_56469775_56469837	0.0125878	GGAAGAC	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr2_+_135676381_135676435	0.0121102	GGAAGAC	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr1_+_193091080_193091222	0.0120964	GGAAGAC	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr3_+_37493610_37493651	0.0120522	GGAAGAC	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr10_+_81107216_81107237	0.0117836	GGAAGAC	ENST00000394579.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F 	ENST00000225174.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F
hg19_v2_chrX_+_107334895_107334934	0.01168	GGAAGAC	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr7_+_106809406_106809460	0.0116254	GGAAGAC	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr10_-_115904361_115904375	0.0113506	GGAAGAC	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr3_+_150804676_150804697	0.0110923	GGAAGAC	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr5_+_176513868_176513893	0.0110056	GGAAGAC	ENST00000292408.4|FGFR4|ENSG00000160867.10|fibroblast growth factor receptor 4
hg19_v2_chr2_+_139259324_139259389	0.0108407	GGAAGAC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr6_+_53659746_53659817	0.0106013	GGAAGAC	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chr2_+_234263120_234263174	0.0104951	GGAAGAC	ENST00000264057.2|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa 	ENST00000427930.1|DGKD|ENSG00000077044.5|diacylglycerol kinase, delta 130kDa
hg19_v2_chr1_-_44497024_44497068	0.0101885	GGAAGAC	ENST00000372306.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000372310.3|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9 	ENST00000475075.2|SLC6A9|ENSG00000196517.7|solute carrier family 6 (neurotransmitter transporter, glycine), member 9
hg19_v2_chr15_-_65809581_65809617	0.0092183	GGAAGAC	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr3_-_52312636_52312673	0.00918791	GGAAGAC	ENST00000296490.3|WDR82|ENSG00000164091.7|WD repeat domain 82
hg19_v2_chr10_+_70883908_70884003	0.00907359	GGAAGAC	ENST00000263559.6|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000395098.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000546041.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe) 	ENST00000541711.1|VPS26A|ENSG00000122958.10|vacuolar protein sorting 26 homolog A (S. pombe)
hg19_v2_chr6_+_111195973_111195994	0.00882468	GGAAGAC	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr10_+_80828774_80828792	0.00821209	GGAAGAC	ENST00000334512.5|ZMIZ1|ENSG00000108175.12|zinc finger, MIZ-type containing 1
hg19_v2_chr11_-_75062730_75062775	0.00796812	GGAAGAC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr20_+_49348081_49348096	0.00782886	GGAAGAC	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr3_-_69435224_69435280	0.00762242	GGAAGAC	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr12_+_67663056_67663067	0.00713889	GGAAGAC	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr7_-_42276612_42276782	0.00666406	GGAAGAC	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr16_+_16043406_16043434	0.00605564	GGAAGAC	ENST00000399410.3|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000399408.2|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000346370.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000351154.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000345148.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1 	ENST00000349029.5|ABCC1|ENSG00000103222.14|ATP-binding cassette, sub-family C (CFTR/MRP), member 1
hg19_v2_chr1_+_113161778_113161820	0.0052206	GGAAGAC	ENST00000263168.3|CAPZA1|ENSG00000116489.8|capping protein (actin filament) muscle Z-line, alpha 1
hg19_v2_chr8_+_42249418_42249429	0.00502082	GGAAGAC	ENST00000521158.1|VDAC3|ENSG00000078668.9|voltage-dependent anion channel 3 	ENST00000022615.4|VDAC3|ENSG00000078668.9|voltage-dependent anion channel 3
hg19_v2_chr12_+_122064398_122064484	0.00483351	GGAAGAC	ENST00000330079.7|ORAI1|ENSG00000182500.7|ORAI calcium release-activated calcium modulator 1
hg19_v2_chr5_+_154238096_154238119	0.00474006	GGAAGAC	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr14_+_23790655_23790680	0.00469736	GGAAGAC	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr1_+_224301787_224301836	0.00467554	GGAAGAC	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr4_-_87281224_87281375	0.00444006	GGAAGAC	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr12_+_56367697_56367893	0.00433888	GGAAGAC	ENST00000553116.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000360299.5|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000548068.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000549915.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000551459.1|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family 	ENST00000448789.2|RAB5B|ENSG00000111540.11|RAB5B, member RAS oncogene family
hg19_v2_chrX_+_122993827_122993910	0.00419634	GGAAGAC	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr17_-_19771216_19771230	0.00412511	GGAAGAC	ENST00000395544.4|ULK2|ENSG00000083290.15|unc-51 like autophagy activating kinase 2
hg19_v2_chr17_-_1465924_1466129	0.00384151	GGAAGAC	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr4_+_15004165_15004298	0.00349202	GGAAGAC	ENST00000538197.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000541112.1|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2 	ENST00000442003.2|CPEB2|ENSG00000137449.11|cytoplasmic polyadenylation element binding protein 2
hg19_v2_chr1_-_205719295_205719404	0.0033222	GGAAGAC	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr20_+_35202909_35203075	0.00308192	GGAAGAC	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr16_+_85646763_85646822	0.00291169	GGAAGAC	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr3_-_33686743_33686807	0.00263624	GGAAGAC	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr3_+_180630090_180630311	0.00260411	GGAAGAC	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr7_+_148936732_148936761	0.00255827	GGAAGAC	ENST00000335870.2|ZNF212|ENSG00000170260.4|zinc finger protein 212
hg19_v2_chr7_-_71801980_71802013	0.0023226	GGAAGAC	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr12_+_93965451_93965494	0.0010737	GGAAGAC	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr15_+_68346501_68346550	0.00107339	GGAAGAC	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr10_-_52645416_52645444	0.000349899	GGAAGAC	ENST00000374001.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373997.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000373995.3|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000282641.2|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000395495.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor 	ENST00000414883.1|A1CF|ENSG00000148584.10|APOBEC1 complementation factor
hg19_v2_chr18_+_56887381_56887498	3.13097e-05	GGAAGAC	ENST00000256857.2|GRP|ENSG00000134443.5|gastrin-releasing peptide 	ENST00000529320.2|GRP|ENSG00000134443.5|gastrin-releasing peptide 	ENST00000420468.2|GRP|ENSG00000134443.5|gastrin-releasing peptide
