hg19_v2_chr1_-_153044083_153044088	1.27136	ISX	ENST00000341611.2|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr1_+_206138457_206138503	1.07315	ISX	ENST00000367128.3|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A 	ENST00000431655.2|FAM72A|ENSG00000196550.6|family with sequence similarity 72, member A
hg19_v2_chr1_-_143913143_143913143	1.06342	ISX	ENST00000400889.1|FAM72D|ENSG00000215784.4|family with sequence similarity 72, member D
hg19_v2_chr1_+_120839005_120839031	1.04376	ISX	ENST00000369390.3|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B 	ENST00000452190.1|FAM72B|ENSG00000188610.8|family with sequence similarity 72, member B
hg19_v2_chr1_-_197115818_197115829	1.00596	ISX	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr6_+_31126291_31126399	0.912817	ISX	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr16_+_2479390_2479409	0.88733	ISX	ENST00000397066.4|CCNF|ENSG00000162063.8|cyclin F
hg19_v2_chr20_+_44441271_44441297	0.793592	ISX	ENST00000335046.3|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C 	ENST00000243893.6|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr5_+_159848807_159848847	0.740332	ISX	ENST00000352433.5|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr20_+_44441215_44441255	0.72765	ISX	ENST00000356455.4|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C 	ENST00000405520.1|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr22_-_24303340_24303373	0.724962	ISX	ENST00000404172.3|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene) 	ENST00000290765.4|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene)
hg19_v2_chr10_+_91461337_91461380	0.723236	ISX	ENST00000260753.4|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000416354.1|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000394289.2|KIF20B|ENSG00000138182.10|kinesin family member 20B 	ENST00000371728.3|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr22_+_24322322_24322387	0.716656	ISX	ENST00000215780.5|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2 	ENST00000402588.3|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2
hg19_v2_chr20_+_44441304_44441319	0.712456	ISX	ENST00000352551.5|UBE2C|ENSG00000175063.12|ubiquitin-conjugating enzyme E2C
hg19_v2_chr6_+_34204642_34204664	0.708182	ISX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr3_-_149095652_149095652	0.705827	ISX	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr4_-_48018580_48018609	0.698563	ISX	ENST00000514170.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr19_-_36001113_36001196	0.566251	ISX	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr11_+_33061543_33061585	0.565472	ISX	ENST00000432887.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000528898.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000531632.2|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1
hg19_v2_chr4_-_174255536_174255547	0.563217	ISX	ENST00000446922.2|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr17_+_59489112_59489112	0.560137	ISX	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr12_+_122688090_122688284	0.534257	ISX	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr17_+_40610862_40611087	0.5257	ISX	ENST00000393829.2|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000546249.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000537728.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000264649.6|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000585525.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000343619.4|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000544137.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000589727.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1 	ENST00000587824.1|ATP6V0A1|ENSG00000033627.10|ATPase, H+ transporting, lysosomal V0 subunit a1
hg19_v2_chr12_-_10022735_10022735	0.51061	ISX	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr11_-_111741994_111742058	0.488599	ISX	ENST00000398006.2|ALG9|ENSG00000086848.10|ALG9, alpha-1,2-mannosyltransferase
hg19_v2_chr12_-_10978957_10978957	0.47912	ISX	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr1_-_161208013_161208092	0.476483	ISX	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_-_159915386_159915426	0.469855	ISX	ENST00000361509.3|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9 	ENST00000368094.1|IGSF9|ENSG00000085552.12|immunoglobulin superfamily, member 9
hg19_v2_chr22_-_32766972_32766996	0.460484	ISX	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr16_+_12059050_12059079	0.451811	ISX	ENST00000396495.3|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr6_-_111927062_111927125	0.431696	ISX	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr17_-_57229155_57229198	0.431551	ISX	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr6_+_53948328_53948338	0.428516	ISX	ENST00000370876.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr22_+_24309089_24309089	0.399965	ISX	ENST00000215770.5|DDTL|ENSG00000099974.7|D-dopachrome tautomerase-like
hg19_v2_chr2_-_89247338_89247475	0.392198	ISX	ENST00000496168.1|IGKV1-5|ENSG00000243466.1|immunoglobulin kappa variable 1-5
hg19_v2_chr5_+_159848854_159848917	0.38464	ISX	ENST00000517480.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000520452.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1 	ENST00000393964.1|PTTG1|ENSG00000164611.8|pituitary tumor-transforming 1
hg19_v2_chr2_-_89292422_89292450	0.352613	ISX	ENST00000495489.1|IGKV1-8|ENSG00000240671.1|immunoglobulin kappa variable 1-8
hg19_v2_chr22_-_32767017_32767063	0.339334	ISX	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr17_-_7307358_7307456	0.329089	ISX	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr6_+_73076432_73076455	0.322484	ISX	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_155278625_155278745	0.315636	ISX	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr17_+_42786051_42786066	0.313093	ISX	ENST00000315005.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr17_-_40829026_40829048	0.312896	ISX	ENST00000412503.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chr14_+_32798547_32798606	0.309604	ISX	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr10_+_103986085_103986085	0.309418	ISX	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr22_-_29137771_29137837	0.305072	ISX	ENST00000439200.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000405598.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000398017.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000425190.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000348295.3|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382578.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382565.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382566.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382580.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000328354.6|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr1_+_209602156_209602183	0.298317	ISX	ENST00000429156.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000366437.3|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000603283.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding) 	ENST00000431096.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr6_-_33860521_33860556	0.297446	ISX	ENST00000525746.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016 	ENST00000531046.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016
hg19_v2_chr17_-_40828969_40829024	0.296702	ISX	ENST00000591022.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000587627.1|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 	ENST00000293349.6|PLEKHH3|ENSG00000068137.10|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3
hg19_v2_chr1_+_155278539_155278559	0.295807	ISX	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr1_+_87595433_87595457	0.29479	ISX	ENST00000469312.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140 	ENST00000490006.2|RP5-1052I5.1|ENSG00000267272.1|long intergenic non-protein coding RNA 1140
hg19_v2_chr14_-_81425828_81425857	0.284329	ISX	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr22_-_24316648_24316773	0.282996	ISX	ENST00000403754.3|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000430101.2|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000398344.4|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr9_+_136501478_136501500	0.281785	ISX	ENST00000393056.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase) 	ENST00000263611.2|DBH|ENSG00000123454.6|dopamine beta-hydroxylase (dopamine beta-monooxygenase)
hg19_v2_chr4_+_87515454_87515486	0.279436	ISX	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr19_-_14785622_14785667	0.272501	ISX	ENST00000443157.2|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chrX_+_44703249_44703273	0.269197	ISX	ENST00000339042.4|DUSP21|ENSG00000189037.6|dual specificity phosphatase 21
hg19_v2_chr14_+_57671888_57671888	0.266157	ISX	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr22_-_50523760_50523787	0.265407	ISX	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr3_+_51851612_51851624	0.26453	ISX	ENST00000456080.1|IQCF3|ENSG00000229972.3|IQ motif containing F3
hg19_v2_chr7_+_144052381_144052509	0.257674	ISX	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr14_-_94789663_94789731	0.251779	ISX	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr6_+_30687978_30688141	0.251335	ISX	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr8_+_7783859_7783859	0.246533	ISX	ENST00000400120.3|ZNF705B|ENSG00000215356.3|zinc finger protein 705B
hg19_v2_chr11_+_55578854_55578854	0.245287	ISX	ENST00000333973.2|OR5L1|ENSG00000186117.2|olfactory receptor, family 5, subfamily L, member 1
hg19_v2_chr1_-_150849047_150849085	0.243563	ISX	ENST00000354396.2|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator 	ENST00000505755.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr11_+_75526212_75526301	0.242306	ISX	ENST00000356136.3|UVRAG|ENSG00000198382.4|UV radiation resistance associated
hg19_v2_chr8_+_22132847_22132876	0.240138	ISX	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr1_-_20250110_20250110	0.229382	ISX	ENST00000375116.3|PLA2G2E|ENSG00000188784.4|phospholipase A2, group IIE
hg19_v2_chr19_-_14785674_14785685	0.225254	ISX	ENST00000253673.5|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chr17_-_40337470_40337470	0.22156	ISX	ENST00000293330.1|HCRT|ENSG00000161610.1|hypocretin (orexin) neuropeptide precursor
hg19_v2_chr11_+_95523621_95523710	0.220762	ISX	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr6_+_160542821_160542852	0.217158	ISX	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr14_+_32798462_32798539	0.216174	ISX	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr9_-_132383055_132383055	0.215947	ISX	ENST00000372478.4|C9orf50|ENSG00000179058.5|chromosome 9 open reading frame 50
hg19_v2_chr17_-_27418537_27418537	0.21501	ISX	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr17_-_77005801_77005812	0.214754	ISX	ENST00000392446.5|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr1_-_43833628_43833703	0.213904	ISX	ENST00000413844.2|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1 	ENST00000372458.3|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1
hg19_v2_chr6_+_29795595_29795622	0.213822	ISX	ENST00000360323.6|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G 	ENST00000376818.3|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G 	ENST00000376815.3|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G
hg19_v2_chr8_-_7243080_7243080	0.213239	ISX	ENST00000400156.4|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr1_-_150849174_150849200	0.210734	ISX	ENST00000515192.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr17_-_2966901_2966901	0.210114	ISX	ENST00000575751.1|OR1D5|ENSG00000262628.1|olfactory receptor, family 1, subfamily D, member 5
hg19_v2_chr17_-_18266765_18266786	0.206466	ISX	ENST00000354098.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr4_+_48018781_48018816	0.206372	ISX	ENST00000295461.5|NIPAL1|ENSG00000163293.7|NIPA-like domain containing 1
hg19_v2_chr11_-_121986923_121986923	0.20071	ISX	ENST00000560104.1|BLID|ENSG00000259571.1|BH3-like motif containing, cell death inducer
hg19_v2_chr12_+_26348246_26348310	0.195873	ISX	ENST00000422622.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr5_+_150226085_150226085	0.190626	ISX	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr10_+_135160844_135160869	0.190315	ISX	ENST00000423766.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1 	ENST00000458230.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1
hg19_v2_chr6_-_111927449_111927482	0.189887	ISX	ENST00000368761.5|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000392556.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2 	ENST00000340026.6|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr17_+_46970178_46970180	0.188981	ISX	ENST00000393366.2|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000506855.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr11_-_13484713_13484850	0.188712	ISX	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chrX_+_43515467_43515562	0.186407	ISX	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr6_+_160542870_160542968	0.185692	ISX	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr12_-_22063787_22063912	0.184865	ISX	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr20_-_50722183_50722217	0.179839	ISX	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr20_-_50418947_50418964	0.179359	ISX	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chrY_+_14813160_14813160	0.179107	ISX	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr21_+_35014783_35014816	0.17659	ISX	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr7_+_50348268_50348366	0.174128	ISX	ENST00000438033.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000439701.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr17_+_46970127_46970132	0.167989	ISX	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr19_+_12902289_12902310	0.167285	ISX	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr22_+_40322623_40322646	0.166791	ISX	ENST00000399090.2|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr20_-_50418972_50419029	0.166767	ISX	ENST00000395997.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr5_-_82969405_82969556	0.166742	ISX	ENST00000510978.1|HAPLN1|ENSG00000145681.6|hyaluronan and proteoglycan link protein 1
hg19_v2_chr22_+_40322595_40322618	0.166393	ISX	ENST00000420971.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000544756.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr17_+_46970134_46970170	0.157342	ISX	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr3_+_28390637_28390705	0.156261	ISX	ENST00000420223.1|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2 	ENST00000383768.2|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2
hg19_v2_chr14_+_70233810_70233874	0.155656	ISX	ENST00000394366.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553548.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553369.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000557154.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000451983.2|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5 	ENST00000553635.1|SRSF5|ENSG00000100650.11|serine/arginine-rich splicing factor 5
hg19_v2_chr4_-_186733363_186733392	0.154616	ISX	ENST00000393523.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000393528.3|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000449407.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr2_+_124782857_124782870	0.152004	ISX	ENST00000431078.1|CNTNAP5|ENSG00000155052.14|contactin associated protein-like 5
hg19_v2_chr11_+_119205222_119205247	0.149712	ISX	ENST00000311413.4|RNF26|ENSG00000173456.4|ring finger protein 26
hg19_v2_chr15_+_58430567_58430589	0.148801	ISX	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr10_-_105110831_105110885	0.147681	ISX	ENST00000337211.4|PCGF6|ENSG00000156374.10|polycomb group ring finger 6
hg19_v2_chr8_+_50824233_50824354	0.143989	ISX	ENST00000522124.1|SNTG1|ENSG00000147481.9|syntrophin, gamma 1
hg19_v2_chr2_+_204571375_204571432	0.14334	ISX	ENST00000374478.4|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr15_+_58430368_58430401	0.142772	ISX	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr5_-_177580855_177580927	0.142076	ISX	ENST00000514354.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein 	ENST00000511078.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr10_+_124913793_124913927	0.142062	ISX	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr6_+_36165133_36165229	0.138956	ISX	ENST00000446974.1|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3 	ENST00000454960.1|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr17_-_45266542_45266683	0.138717	ISX	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr4_-_177190364_177190379	0.138559	ISX	ENST00000296525.3|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr9_-_4666421_4666492	0.134406	ISX	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr14_+_22670455_22670477	0.132946	ISX	ENST00000390460.1|TRAV26-2|ENSG00000211812.1|T cell receptor alpha variable 26-2
hg19_v2_chr2_+_90248739_90248739	0.130563	ISX	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr2_-_198540719_198540748	0.129081	ISX	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr17_-_18266797_18266817	0.127746	ISX	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr7_+_115862858_115863015	0.12721	ISX	ENST00000393481.2|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr20_+_24449821_24449843	0.126845	ISX	ENST00000376862.3|SYNDIG1|ENSG00000101463.5|synapse differentiation inducing 1
hg19_v2_chr19_+_50270219_50270391	0.122056	ISX	ENST00000354293.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit 	ENST00000359032.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit
hg19_v2_chr12_-_50790267_50790405	0.119925	ISX	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr17_-_18266660_18266756	0.118028	ISX	ENST00000582653.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000352886.6|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr19_+_1275917_1275952	0.117474	ISX	ENST00000469144.1|C19orf24|ENSG00000228300.9|chromosome 19 open reading frame 24
hg19_v2_chr16_-_31106211_31106315	0.117469	ISX	ENST00000532364.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000319788.7|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000529564.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000354895.4|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000394975.2|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr4_+_144303093_144303132	0.114412	ISX	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr6_-_10115007_10115007	0.114336	ISX	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr14_-_73925225_73925323	0.113002	ISX	ENST00000356296.4|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000355058.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000359560.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000557597.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555238.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000535282.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555987.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554546.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr16_-_31106048_31106124	0.108509	ISX	ENST00000300851.6|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chrX_+_37639302_37639326	0.108246	ISX	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr10_-_104001231_104001274	0.107914	ISX	ENST00000370002.3|PITX3|ENSG00000107859.5|paired-like homeodomain 3
hg19_v2_chr10_+_114206956_114207040	0.1067	ISX	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chr12_+_16500037_16500076	0.0999075	ISX	ENST00000536371.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000010404.2|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr10_-_56560939_56560950	0.0991244	ISX	ENST00000373955.1|PCDH15|ENSG00000150275.13|protocadherin-related 15
hg19_v2_chr17_+_45286706_45286766	0.0987999	ISX	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr13_+_38923959_38924252	0.0976111	ISX	ENST00000379649.1|UFM1|ENSG00000120686.7|ubiquitin-fold modifier 1 	ENST00000239878.4|UFM1|ENSG00000120686.7|ubiquitin-fold modifier 1 	ENST00000437952.1|UFM1|ENSG00000120686.7|ubiquitin-fold modifier 1 	ENST00000379641.1|UFM1|ENSG00000120686.7|ubiquitin-fold modifier 1
hg19_v2_chr7_-_92107229_92107265	0.0951493	ISX	ENST00000603053.1|ERVW-1|ENSG00000242950.2|endogenous retrovirus group W, member 1
hg19_v2_chr16_-_31105870_31106005	0.0939525	ISX	ENST00000394971.3|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr14_-_24711470_24711494	0.0934059	ISX	ENST00000559969.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr1_-_68698222_68698266	0.0925517	ISX	ENST00000370976.3|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000354777.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000262348.4|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000540432.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr8_+_92261516_92261555	0.0919116	ISX	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr5_-_159546396_159546470	0.0915655	ISX	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr4_-_174255400_174255516	0.0915326	ISX	ENST00000506267.1|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr22_+_46476192_46476222	0.0910654	ISX	ENST00000443490.1|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr15_-_75199213_75199237	0.0906256	ISX	ENST00000562698.1|FAM219B|ENSG00000178761.10|family with sequence similarity 219, member B
hg19_v2_chr6_+_28317685_28317761	0.0896572	ISX	ENST00000252211.2|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000341464.5|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3 	ENST00000377255.3|ZKSCAN3|ENSG00000189298.9|zinc finger with KRAB and SCAN domains 3
hg19_v2_chr3_+_37284668_37284771	0.0870126	ISX	ENST00000361924.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000444882.1|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000356847.4|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000450863.2|GOLGA4|ENSG00000144674.12|golgin A4 	ENST00000429018.1|GOLGA4|ENSG00000144674.12|golgin A4
hg19_v2_chr2_+_242089833_242089913	0.0864567	ISX	ENST00000404405.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000439916.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000406106.3|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7 	ENST00000401987.1|PPP1R7|ENSG00000115685.10|protein phosphatase 1, regulatory subunit 7
hg19_v2_chr19_-_3557570_3557590	0.0852124	ISX	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr17_+_73452545_73452685	0.0843565	ISX	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr2_+_172778952_172779004	0.0842509	ISX	ENST00000392584.1|HAT1|ENSG00000128708.8|histone acetyltransferase 1 	ENST00000264108.4|HAT1|ENSG00000128708.8|histone acetyltransferase 1
hg19_v2_chr4_-_100242549_100242564	0.0821646	ISX	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr19_+_4153598_4153665	0.0805254	ISX	ENST00000078445.2|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000252587.3|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000595923.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602257.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602147.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3
hg19_v2_chr9_+_34646624_34646649	0.0795006	ISX	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr2_-_183387064_183387129	0.0789109	ISX	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr8_+_21881636_21881651	0.0779126	ISX	ENST00000520125.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000521157.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000397940.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2 	ENST00000522813.1|NPM2|ENSG00000158806.9|nucleophosmin/nucleoplasmin 2
hg19_v2_chr12_+_16500599_16500731	0.0775615	ISX	ENST00000535309.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540056.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396209.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540126.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr10_-_99447024_99447080	0.0766262	ISX	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr5_+_140557371_140557371	0.0751087	ISX	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr11_-_13517565_13517728	0.0747668	ISX	ENST00000282091.1|PTH|ENSG00000152266.2|parathyroid hormone 	ENST00000529816.1|PTH|ENSG00000152266.2|parathyroid hormone
hg19_v2_chr6_+_3259148_3259294	0.0743904	ISX	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr3_+_111393501_111393538	0.0733382	ISX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr10_-_1095050_1095110	0.0725096	ISX	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr1_-_68698197_68698214	0.0724776	ISX	ENST00000370973.2|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator 	ENST00000370971.1|WLS|ENSG00000116729.9|wntless Wnt ligand secretion mediator
hg19_v2_chr22_+_17956618_17956637	0.0708803	ISX	ENST00000262608.8|CECR2|ENSG00000099954.14|cat eye syndrome chromosome region, candidate 2
hg19_v2_chrX_-_139587225_139587234	0.0706209	ISX	ENST00000370536.2|SOX3|ENSG00000134595.6|SRY (sex determining region Y)-box 3
hg19_v2_chr10_+_99205959_99205981	0.0704374	ISX	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chrX_+_77166172_77166261	0.0699816	ISX	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr1_-_150849208_150849244	0.0696528	ISX	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr1_+_151735431_151735446	0.0690193	ISX	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr14_-_20801427_20801457	0.0645823	ISX	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chr5_-_177580933_177580968	0.0644061	ISX	ENST00000274606.3|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr17_+_39394250_39394297	0.0640682	ISX	ENST00000254072.6|KRTAP9-8|ENSG00000187272.4|keratin associated protein 9-8
hg19_v2_chr17_+_73452695_73452744	0.0629745	ISX	ENST00000582186.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000582455.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000581252.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000579208.1|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr5_-_177580777_177580830	0.0622373	ISX	ENST00000314397.4|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr3_-_151034734_151034745	0.0616315	ISX	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr10_+_99205894_99205954	0.0611311	ISX	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr1_+_220267429_220267510	0.0594361	ISX	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr6_-_119256279_119256308	0.0593716	ISX	ENST00000316068.3|MCM9|ENSG00000111877.13|minichromosome maintenance complex component 9
hg19_v2_chr17_+_45286387_45286455	0.0592215	ISX	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr22_+_21400229_21400276	0.0580962	ISX	ENST00000342608.4|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000543388.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891  	ENST00000442047.1|AC002472.13|ENSG00000187905.6|Leucine-rich repeat-containing protein LOC400891
hg19_v2_chr16_-_58585513_58585670	0.0578878	ISX	ENST00000245138.4|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000567285.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr16_+_89160217_89160268	0.0575909	ISX	ENST00000317447.4|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000537290.1|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3
hg19_v2_chr20_+_9494987_9495027	0.0568365	ISX	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr14_+_104182061_104182072	0.0564286	ISX	ENST00000216602.6|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr10_+_124914285_124914397	0.0529225	ISX	ENST00000407911.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr6_-_135271260_135271272	0.0526788	ISX	ENST00000265605.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr3_+_113775576_113775592	0.0504274	ISX	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr6_-_135271219_135271257	0.04906	ISX	ENST00000367847.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1 	ENST00000367845.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr3_-_15563229_15563265	0.0471799	ISX	ENST00000383786.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383787.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383785.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000383788.5|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000603808.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr10_+_124913930_124913946	0.0467458	ISX	ENST00000368858.5|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr2_-_3521518_3521518	0.0467113	ISX	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr1_-_205819245_205819272	0.0464336	ISX	ENST00000367136.4|PM20D1|ENSG00000162877.8|peptidase M20 domain containing 1
hg19_v2_chr6_-_30080863_30080872	0.0406821	ISX	ENST00000540829.1|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr14_-_24711865_24711880	0.0381719	ISX	ENST00000399423.4|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000267415.7|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr12_+_3000037_3000067	0.0377318	ISX	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr6_-_31125850_31126015	0.0360392	ISX	ENST00000507751.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448162.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000502557.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503420.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507892.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507226.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000513222.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503934.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000396263.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000508683.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000428174.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448141.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507829.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000455279.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000376266.5|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1
hg19_v2_chr14_+_104182105_104182184	0.0359645	ISX	ENST00000311141.2|ZFYVE21|ENSG00000100711.9|zinc finger, FYVE domain containing 21
hg19_v2_chr14_-_24711806_24711861	0.0359164	ISX	ENST00000540705.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000538777.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558566.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000559019.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr4_-_66536057_66536071	0.0353235	ISX	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr8_+_9953214_9953237	0.0348283	ISX	ENST00000382490.5|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr17_+_42785976_42786039	0.0343264	ISX	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr1_+_32666188_32666274	0.0339535	ISX	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr2_+_135809835_135809874	0.0337051	ISX	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr11_-_62521614_62521660	0.0335126	ISX	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr7_-_36764004_36764059	0.0327759	ISX	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr8_+_9953061_9953097	0.0325029	ISX	ENST00000522907.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A 	ENST00000528246.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr1_-_112281875_112282046	0.0312469	ISX	ENST00000527621.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000534365.1|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B 	ENST00000357260.5|FAM212B|ENSG00000197852.8|family with sequence similarity 212, member B
hg19_v2_chr13_+_40229764_40229869	0.029142	ISX	ENST00000416691.1|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000422759.2|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000455146.3|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6
hg19_v2_chrX_-_153363125_153363182	0.0287669	ISX	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr1_+_62902308_62902335	0.0281463	ISX	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr2_-_79315112_79315125	0.0281441	ISX	ENST00000305089.3|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chr5_-_95297678_95297775	0.0274177	ISX	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr11_-_62414070_62414104	0.025811	ISX	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr4_-_69536346_69536371	0.025339	ISX	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr9_+_34646651_34646689	0.024827	ISX	ENST00000378842.3|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase
hg19_v2_chr6_+_64345698_64345750	0.023121	ISX	ENST00000506783.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000481385.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000515594.1|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000494284.2|PHF3|ENSG00000118482.7|PHD finger protein 3 	ENST00000262043.3|PHF3|ENSG00000118482.7|PHD finger protein 3
hg19_v2_chr1_-_209824643_209824739	0.0221008	ISX	ENST00000391911.1|LAMB3|ENSG00000196878.8|laminin, beta 3 	ENST00000415782.1|LAMB3|ENSG00000196878.8|laminin, beta 3
hg19_v2_chr16_+_12059091_12059207	0.0216178	ISX	ENST00000562385.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr12_-_120966943_120966985	0.020213	ISX	ENST00000552443.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547736.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000445328.2|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000547943.1|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae) 	ENST00000288532.6|COQ5|ENSG00000110871.10|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
hg19_v2_chr12_+_16500571_16500598	0.0199091	ISX	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr21_+_35014706_35014767	0.0197826	ISX	ENST00000399353.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000444491.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381318.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr17_-_43045439_43045439	0.0196743	ISX	ENST00000253407.3|C1QL1|ENSG00000131094.3|complement component 1, q subcomponent-like 1
hg19_v2_chrX_+_108779004_108779015	0.0195662	ISX	ENST00000218004.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr17_+_79650962_79651006	0.0195277	ISX	ENST00000329138.4|HGS|ENSG00000185359.8|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v2_chr8_+_22132810_22132844	0.018269	ISX	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr16_+_3070313_3070347	0.0176401	ISX	ENST00000326577.4|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr4_-_122686261_122686340	0.0162412	ISX	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr4_-_69434245_69434245	0.0115199	ISX	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v2_chr12_+_52282001_52282021	0.010581	ISX	ENST00000340970.4|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33
hg19_v2_chr5_-_159846399_159846412	0.00956477	ISX	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr22_+_36044411_36044444	0.00934533	ISX	ENST00000409652.4|APOL6|ENSG00000221963.5|apolipoprotein L, 6
hg19_v2_chr3_+_115342349_115342373	0.00804115	ISX	ENST00000393780.3|GAP43|ENSG00000172020.8|growth associated protein 43
hg19_v2_chr15_+_80351910_80351955	0.00730319	ISX	ENST00000261749.6|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561060.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr5_+_125935960_125935960	0.0066942	ISX	ENST00000297540.4|PHAX|ENSG00000164902.9|phosphorylated adaptor for RNA export
hg19_v2_chr8_-_12612962_12613049	0.00396486	ISX	ENST00000398246.3|LONRF1|ENSG00000154359.8|LON peptidase N-terminal domain and ring finger 1
hg19_v2_chr18_-_67624160_67624238	0.00212491	ISX	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr7_-_122339162_122339210	0.00211726	ISX	ENST00000340112.2|RNF133|ENSG00000188050.2|ring finger protein 133
hg19_v2_chr14_+_22964877_22964914	0.00171416	ISX	ENST00000390494.1|TRAJ43|ENSG00000211846.1|T cell receptor alpha joining 43
hg19_v2_chr14_-_53258314_53258418	0.00135036	ISX	ENST00000216410.3|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1 	ENST00000557604.1|GNPNAT1|ENSG00000100522.4|glucosamine-phosphate N-acetyltransferase 1
