Motif ID: NHLH1,2.p2

Z-value: 1.624


Transcription factors associated with NHLH1,2.p2:

Gene SymbolEntrez IDGene Name
NHLH1 4807 nescient helix loop helix 1
NHLH2 4808 nescient helix loop helix 2

Activity-expression correlation:

GenePromoterPearsonP-valuePlot
NHLH2chr1_-_116383323-0.902.3e-03Click!
NHLH1chr1_+_1603368560.639.7e-02Click!


Activity profile for motif NHLH1,2.p2.

activity profile for motif NHLH1,2.p2


Sorted Z-values histogram for motif NHLH1,2.p2

Sorted Z-values for motif NHLH1,2.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of NHLH1,2.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr7_-_137531585 2.597 NM_004717
DGKI
diacylglycerol kinase, iota
chrX_+_16964730 2.586 NM_001080975
NM_004726
REPS2

RALBP1 associated Eps domain containing 2

chr8_+_97506141 2.246 SDC2
syndecan 2
chr1_-_57045129 2.213 PPAP2B
phosphatidic acid phosphatase type 2B
chr8_+_97506071 2.206 SDC2
syndecan 2
chr8_+_97506020 2.117 SDC2
syndecan 2
chr8_+_97506478 2.088 SDC2
syndecan 2
chr11_+_113930430 1.992 NM_006006
ZBTB16
zinc finger and BTB domain containing 16
chr1_+_89990396 1.922 NM_001134476
LRRC8B
leucine rich repeat containing 8 family, member B
chr19_+_18111923 1.774 NM_001025604
ARRDC2
arrestin domain containing 2
chr2_+_109745996 1.772 NM_001099289
SH3RF3
SH3 domain containing ring finger 3
chr11_-_35547144 1.766 NM_001001991
NM_015430
PAMR1

peptidase domain containing associated with muscle regeneration 1

chr2_-_230579198 1.756 NM_139072
DNER
delta/notch-like EGF repeat containing
chr2_-_230135954 1.683 NM_001100818
NM_017933
PID1

phosphotyrosine interaction domain containing 1

chr8_+_104383785 1.682 NM_138455
CTHRC1
collagen triple helix repeat containing 1
chr8_+_104383701 1.638 CTHRC1
collagen triple helix repeat containing 1
chr9_-_97401588 1.614 FBP1
fructose-1,6-bisphosphatase 1
chr15_-_48937795 1.592 NM_000138
FBN1
fibrillin 1
chr1_-_57044980 1.564 PPAP2B
phosphatidic acid phosphatase type 2B
chr1_-_57045214 1.560 PPAP2B
phosphatidic acid phosphatase type 2B
chrX_-_154114431 1.553 NM_019863
F8
coagulation factor VIII, procoagulant component
chr5_+_92920592 1.539 NR2F1
NR2F2
nuclear receptor subfamily 2, group F, member 1
nuclear receptor subfamily 2, group F, member 2
chr16_+_53133063 1.532 CHD9
chromodomain helicase DNA binding protein 9
chr9_-_97401746 1.489 FBP1
fructose-1,6-bisphosphatase 1
chr6_+_124125068 1.407 NM_001040214
NM_153355
NKAIN2

Na+/K+ transporting ATPase interacting 2

chr5_+_156693051 1.402 NM_001037333
NM_001037332
CYFIP2

cytoplasmic FMR1 interacting protein 2

chr19_+_12863406 1.374 NM_017682
BEST2
bestrophin 2
chr12_+_90102639 1.349 LOC338758
uncharacterized LOC338758
chr5_-_19988293 1.301 NM_001167667
NM_004934
CDH18

cadherin 18, type 2

chr19_+_35521591 1.293 NM_001037
NM_199037
SCN1B

sodium channel, voltage-gated, type I, beta

chr14_-_52535711 1.290 NID2
nidogen 2 (osteonidogen)
chr14_-_52535765 1.272 NID2
nidogen 2 (osteonidogen)
chr9_-_97401833 1.263 NM_000507
FBP1
fructose-1,6-bisphosphatase 1
chr14_-_52535737 1.258 NID2
nidogen 2 (osteonidogen)
chr11_+_113930296 1.256 ZBTB16
zinc finger and BTB domain containing 16
chr20_+_34894190 1.222 DLGAP4
discs, large (Drosophila) homolog-associated protein 4
chr6_-_46459010 1.214 NM_001251974
RCAN2
regulator of calcineurin 2
chr5_-_180688095 1.198 NM_032765
TRIM52
tripartite motif containing 52
chr12_-_29936685 1.195 NM_001193451
TMTC1
transmembrane and tetratricopeptide repeat containing 1
chr2_+_56411123 1.140 NM_001080433
CCDC85A
coiled-coil domain containing 85A
chr22_+_21738039 1.135 NM_001128635
RIMBP3B
RIMS binding protein 3B
chr1_-_92351613 1.131 NM_001195683
NM_003243
TGFBR3

transforming growth factor, beta receptor III

chr10_-_81205091 1.123 NM_153367
ZCCHC24
zinc finger, CCHC domain containing 24
chr7_-_131241321 1.093 NM_001018111
NM_005397
PODXL

podocalyxin-like

chr5_+_67511578 1.063 NM_181523
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr14_-_61115906 1.023 NM_005982
SIX1
SIX homeobox 1
chr5_-_69881965 1.020 SMA4
glucuronidase, beta pseudogene
chr2_+_148778573 1.015 NM_018328
MBD5
methyl-CpG binding domain protein 5
chr3_-_195306274 1.014 APOD
apolipoprotein D
chr14_-_89020888 0.999 NM_007039
PTPN21
protein tyrosine phosphatase, non-receptor type 21
chr6_-_139695739 0.991 CITED2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr12_+_53443834 0.989 NM_170754
TENC1
tensin like C1 domain containing phosphatase (tensin 2)
chr6_-_139695784 0.960 NM_006079
CITED2
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr11_+_46299554 0.955 CREB3L1
cAMP responsive element binding protein 3-like 1
chr2_+_233498206 0.954 NM_025202
EFHD1
EF-hand domain family, member D1
chr13_-_44361032 0.942 NM_001242863
NM_017993
ENOX1

ecto-NOX disulfide-thiol exchanger 1

chr21_+_27011588 0.937 NM_021219
JAM2
junctional adhesion molecule 2
chr6_-_154831788 0.913 CNKSR3
CNKSR family member 3
chr1_-_72748491 0.908


chr6_-_154831652 0.901 CNKSR3
CNKSR family member 3
chr2_-_19558371 0.899 NM_145260
OSR1
odd-skipped related 1 (Drosophila)
chr22_-_21905372 0.891 NM_001128635
RIMBP3B
RIMS binding protein 3B
chr7_+_17338182 0.890 NM_001621
AHR
aryl hydrocarbon receptor
chr11_-_70672644 0.876 SHANK2
SH3 and multiple ankyrin repeat domains 2
chr3_-_73673978 0.869 NM_015009
PDZRN3
PDZ domain containing ring finger 3
chr12_-_56101667 0.862 NM_001144996
NM_002206
ITGA7

integrin, alpha 7

chr8_+_17014006 0.860 ZDHHC2
zinc finger, DHHC-type containing 2
chr11_-_74022609 0.858 NM_182904
P4HA3
prolyl 4-hydroxylase, alpha polypeptide III
chr6_+_72596699 0.857 RIMS1
regulating synaptic membrane exocytosis 1
chr5_+_69696805 0.857 SMA4
glucuronidase, beta pseudogene
chr7_+_100199881 0.852 NM_002593
PCOLCE
procollagen C-endopeptidase enhancer
chr9_+_37650996 0.840 NM_014907
FRMPD1
FERM and PDZ domain containing 1
chr6_-_139695349 0.839 NM_001168389
NM_001168388
CITED2

Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2

chr6_-_154831704 0.838 NM_173515
CNKSR3
CNKSR family member 3
chr3_+_8543508 0.837 NM_014583
LMCD1
LIM and cysteine-rich domains 1
chrX_-_107018889 0.827 TSC22D3
TSC22 domain family, member 3
chr5_-_172756505 0.827 NM_003714
STC2
stanniocalcin 2
chr7_+_44788453 0.812 NM_031449
ZMIZ2
zinc finger, MIZ-type containing 2
chr12_-_56101465 0.806 ITGA7
integrin, alpha 7
chr3_+_32280154 0.804 NM_178868
CMTM8
CKLF-like MARVEL transmembrane domain containing 8
chr3_+_32280211 0.802 CMTM8
CKLF-like MARVEL transmembrane domain containing 8
chr12_-_63328663 0.789 NM_020700
PPM1H
protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr12_+_56075329 0.786 NM_152637
METTL7B
methyltransferase like 7B
chr5_-_136834887 0.786 NM_004598
SPOCK1
sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
chr12_+_56075418 0.780 METTL7B
methyltransferase like 7B
chr5_+_176237435 0.779 NM_133369
UNC5A
unc-5 homolog A (C. elegans)
chr1_-_72748147 0.776 NM_173808
NEGR1
neuronal growth regulator 1
chr5_-_158526428 0.770 EBF1
early B-cell factor 1
chr12_-_15038724 0.767 NM_000900
NM_001190839
MGP

matrix Gla protein

chrX_+_51927918 0.753 NM_001098800
NM_001242362
NM_030801
NM_177535
NM_177537
MAGED4
MAGED4B



melanoma antigen family D, 4
melanoma antigen family D, 4B



chr1_+_77747727 0.753 AK5
adenylate kinase 5
chr2_+_46926323 0.752 NM_144949
SOCS5
suppressor of cytokine signaling 5
chr6_+_72596405 0.742 RIMS1
regulating synaptic membrane exocytosis 1
chr10_-_79397204 0.741 KCNMA1
potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr8_+_72756218 0.738 LOC100132891
uncharacterized LOC100132891
chr8_+_72756335 0.733


chr6_-_167040659 0.731 RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr21_+_47401644 0.727 NM_001848
COL6A1
collagen, type VI, alpha 1
chr1_-_236228476 0.722 NM_002508
NID1
nidogen 1
chrX_-_51812249 0.713 NM_001098800
NM_001242362
NM_030801
NM_177535
NM_177537
MAGED4
MAGED4B



melanoma antigen family D, 4
melanoma antigen family D, 4B



chr1_-_236228382 0.705 NID1
nidogen 1
chr17_-_73761216 0.704 NM_000154
GALK1
galactokinase 1
chr6_-_167040700 0.702 NM_021135
RPS6KA2
ribosomal protein S6 kinase, 90kDa, polypeptide 2
chr17_-_66596736 0.691 FAM20A
family with sequence similarity 20, member A
chr1_+_210406194 0.688 NM_019605
SERTAD4
SERTA domain containing 4
chr4_-_2420252 0.687 NM_001172656
NM_001172657
NM_001172658
NM_020972
ZFYVE28



zinc finger, FYVE domain containing 28



chr12_+_90103470 0.681 LOC338758
uncharacterized LOC338758
chr14_-_52535945 0.675 NM_007361
NID2
nidogen 2 (osteonidogen)
chr9_-_104357202 0.671 NM_147180
PPP3R2
protein phosphatase 3, regulatory subunit B, beta
chr1_-_236228374 0.670 NID1
nidogen 1
chrX_-_19140581 0.670 NM_001079858
NM_001079859
NM_001079860
NM_001184833
NM_001184834
NM_001184835
NM_001184836
NM_001184837
NM_005756
GPR64








G protein-coupled receptor 64








chr2_-_233352530 0.664 NM_004826
ECEL1
endothelin converting enzyme-like 1
chr4_-_39640461 0.655 NM_174921
C4orf34
chromosome 4 open reading frame 34
chr12_-_96184346 0.650 NTN4
netrin 4
chr9_+_108006990 0.649 SLC44A1
solute carrier family 44, member 1
chr12_-_63328857 0.644 PPM1H
protein phosphatase, Mg2+/Mn2+ dependent, 1H
chr5_+_71403040 0.642 NM_005909
MAP1B
microtubule-associated protein 1B
chr17_-_15165860 0.642 PMP22
peripheral myelin protein 22
chr17_-_8702438 0.640 NM_152599
MFSD6L
major facilitator superfamily domain containing 6-like
chr5_+_67511601 0.640 PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr10_-_44070008 0.638 NM_001099282
NM_001099283
NM_001099284
ZNF239


zinc finger protein 239


chr1_-_85930610 0.638 DDAH1
dimethylarginine dimethylaminohydrolase 1
chr5_-_172198160 0.630 NM_004417
DUSP1
dual specificity phosphatase 1
chr14_+_74003817 0.628 NM_001037161
ACOT1
acyl-CoA thioesterase 1
chr1_-_16939687 0.627 NM_017940
NBPF1
neuroblastoma breakpoint family, member 1
chr3_-_45267068 0.623 TMEM158
transmembrane protein 158 (gene/pseudogene)
chr8_+_97505895 0.616 SDC2
syndecan 2
chr5_+_137774632 0.616 NM_016606
REEP2
receptor accessory protein 2
chrX_+_152760346 0.613 NM_001711
BGN
biglycan
chr1_-_92351476 0.613 TGFBR3
transforming growth factor, beta receptor III
chr11_-_70507911 0.610 NM_133266
SHANK2
SH3 and multiple ankyrin repeat domains 2
chr2_+_33359607 0.609 NM_000627
NM_001166264
NM_001166265
NM_001166266
LTBP1



latent transforming growth factor beta binding protein 1



chrX_+_152760452 0.606 BGN
biglycan
chr17_-_78194085 0.605 NM_000199
SGSH
N-sulfoglucosamine sulfohydrolase
chr8_+_97505876 0.604 NM_002998
SDC2
syndecan 2
chrX_-_106959597 0.603 NM_001015881
TSC22D3
TSC22 domain family, member 3
chr12_-_96184510 0.600 NM_021229
NTN4
netrin 4
chrX_+_149531439 0.600 NM_001177465
MAMLD1
mastermind-like domain containing 1
chr1_+_22351984 0.596 LINC00339
long intergenic non-protein coding RNA 339
chrX_+_80457597 0.595 SH3BGRL
SH3 domain binding glutamic acid-rich protein like
chr3_+_69788562 0.590 NM_198159
MITF
microphthalmia-associated transcription factor
chr5_+_95066628 0.587 NM_014899
RHOBTB3
Rho-related BTB domain containing 3
chr15_-_78369825 0.583 NM_015079
NM_144572
TBC1D2B

TBC1 domain family, member 2B

chr6_+_42750465 0.583 FLJ38717
FLJ38717 protein
chr12_-_124457099 0.582 NM_025140
CCDC92
coiled-coil domain containing 92
chr9_+_79074067 0.575 NM_001097633
NM_001490
GCNT1

glucosaminyl (N-acetyl) transferase 1, core 2

chr2_+_238395863 0.574 NM_001042467
NM_024101
MLPH

melanophilin

chr16_+_30406711 0.573 NM_152652
ZNF48
zinc finger protein 48
chr1_-_33647626 0.571 NM_018207
TRIM62
tripartite motif containing 62
chr1_-_57045235 0.568 NM_003713
PPAP2B
phosphatidic acid phosphatase type 2B
chr1_+_78354199 0.562 NM_001172309
NM_144573
NEXN

nexilin (F actin binding protein)

chr4_+_145567147 0.561 NM_022475
HHIP
hedgehog interacting protein
chr5_+_95067511 0.561


chr4_-_57976550 0.559 NM_001253835
NM_001553
IGFBP7

insulin-like growth factor binding protein 7

chr1_+_159175048 0.559 NM_001122951
DARC
Duffy blood group, chemokine receptor
chr1_-_17338266 0.559 NM_001141973
NM_001141974
NM_022089
ATP13A2


ATPase type 13A2


chr20_-_39995497 0.559 NM_052846
EMILIN3
elastin microfibril interfacer 3
chr19_-_46285746 0.557 DMPK
dystrophia myotonica-protein kinase
chr8_+_42995640 0.554 HGSNAT
heparan-alpha-glucosaminide N-acetyltransferase
chr1_-_47133982 0.553 ATPAF1
ATP synthase mitochondrial F1 complex assembly factor 1
chr17_-_66596934 0.552 NM_001243746
NM_017565
FAM20A

family with sequence similarity 20, member A

chr22_-_44708730 0.552 NM_001099294
KIAA1644
KIAA1644
chr10_-_62703822 0.546 NM_001242359
NM_014836
RHOBTB1

Rho-related BTB domain containing 1

chr2_+_191745791 0.546 GLS
glutaminase
chr8_+_37654833 0.545 GPR124
G protein-coupled receptor 124
chr11_-_6341708 0.538 NM_145040
PRKCDBP
protein kinase C, delta binding protein
chr10_+_31608097 0.535 NM_001174093
NM_001174095
NM_001174096
NM_030751
ZEB1



zinc finger E-box binding homeobox 1



chr20_-_57582303 0.534 NM_001336
CTSZ
cathepsin Z
chr4_-_1107313 0.533 NM_001131034
NM_001193318
NM_194439
RNF212


ring finger protein 212


chr11_-_694842 0.531 DEAF1
deformed epidermal autoregulatory factor 1 (Drosophila)
chrX_-_99665270 0.530 NM_001105243
NM_001184880
NM_020766
PCDH19


protocadherin 19


chr2_+_241938254 0.527 NM_001080437
SNED1
sushi, nidogen and EGF-like domains 1
chr1_-_85930733 0.522 NM_012137
DDAH1
dimethylarginine dimethylaminohydrolase 1
chr13_+_102104941 0.521 NM_004791
ITGBL1
integrin, beta-like 1 (with EGF-like repeat domains)
chr17_-_66453561 0.520 NM_017983
WIPI1
WD repeat domain, phosphoinositide interacting 1
chr1_-_212873104 0.520 BATF3
basic leucine zipper transcription factor, ATF-like 3
chr10_+_72972268 0.518 NM_001244889
NM_170744
UNC5B

unc-5 homolog B (C. elegans)

chr2_-_202316227 0.517 NM_015049
TRAK2
trafficking protein, kinesin binding 2
chr14_+_38678594 0.517 SSTR1
somatostatin receptor 1
chr1_-_84464728 0.514 NM_024686
TTLL7
tubulin tyrosine ligase-like family, member 7
chr9_-_35689799 0.510 TPM2
tropomyosin 2 (beta)
chr12_+_79258588 0.510 SYT1
synaptotagmin I
chrX_-_39956655 0.509 NM_001123385
NM_017745
BCOR

BCL6 corepressor

chr10_+_31610063 0.507 NM_001128128
NM_001174094
ZEB1

zinc finger E-box binding homeobox 1

chr21_+_27011766 0.504 JAM2
junctional adhesion molecule 2
chr16_-_3355374 0.503 NM_033208
TIGD7
tigger transposable element derived 7
chr12_+_79258517 0.500 SYT1
synaptotagmin I
chr4_-_185747051 0.499 ACSL1
acyl-CoA synthetase long-chain family member 1
chr22_-_41634055 0.498 CHADL
chondroadherin-like
chr16_+_89642111 0.495 NM_014427
NM_153636
CPNE7

copine VII

chr1_+_155829259 0.495 NM_152280
SYT11
synaptotagmin XI
chr16_+_2802683 0.494 SRRM2
serine/arginine repetitive matrix 2
chr8_-_91657898 0.494 NM_001008495
NM_001146273
TMEM64

transmembrane protein 64

chr1_+_2518464 0.493 FAM213B
family with sequence similarity 213, member B
chr1_-_212873306 0.493 NM_018664
BATF3
basic leucine zipper transcription factor, ATF-like 3
chr8_+_37654757 0.491 GPR124
G protein-coupled receptor 124
chr19_+_18118921 0.490 NM_015683
ARRDC2
arrestin domain containing 2
chr12_+_79258794 0.490 SYT1
synaptotagmin I
chr19_+_36359346 0.489 NM_001024807
NM_005166
APLP1

amyloid beta (A4) precursor-like protein 1

chr19_+_4304590 0.489 NM_024333
FSD1
fibronectin type III and SPRY domain containing 1

Gene Ontology Analysis

Gene overrepresentation in process category:

enrichment   p-value GO term description
1.45 6.40e-07 GO:0051128 regulation of cellular component organization
1.31 7.01e-06 GO:0007399 nervous system development
1.07 1.21e-05 GO:0009987 cellular process
1.48 2.59e-05 GO:0009725 response to hormone stimulus
1.44 5.65e-05 GO:0009719 response to endogenous stimulus
1.38 5.67e-05 GO:0050793 regulation of developmental process
1.21 1.95e-04 GO:0048519 negative regulation of biological process
1.36 2.02e-04 GO:0048468 cell development
1.22 2.79e-04 GO:0048523 negative regulation of cellular process
1.40 9.48e-04 GO:0045595 regulation of cell differentiation
1.35 1.24e-03 GO:0048699 generation of neurons
1.28 1.32e-03 GO:0051239 regulation of multicellular organismal process
1.37 1.43e-03 GO:2000026 regulation of multicellular organismal development
1.33 1.89e-03 GO:0022008 neurogenesis
1.10 1.97e-03 GO:0050794 regulation of cellular process
1.58 2.66e-03 GO:0022603 regulation of anatomical structure morphogenesis
1.35 5.50e-03 GO:0016192 vesicle-mediated transport
1.38 6.96e-03 GO:0007167 enzyme linked receptor protein signaling pathway
1.09 9.06e-03 GO:0050789 regulation of biological process
1.43 9.50e-03 GO:0031175 neuron projection development
1.56 1.16e-02 GO:0040012 regulation of locomotion
1.52 1.18e-02 GO:0071495 cellular response to endogenous stimulus
1.08 1.27e-02 GO:0065007 biological regulation
1.53 1.30e-02 GO:0060284 regulation of cell development
1.53 1.36e-02 GO:0032870 cellular response to hormone stimulus
1.19 1.66e-02 GO:0030154 cell differentiation
1.19 1.75e-02 GO:0048869 cellular developmental process
1.41 1.85e-02 GO:0000904 cell morphogenesis involved in differentiation
1.82 3.18e-02 GO:0010975 regulation of neuron projection development
1.13 3.18e-02 GO:0032502 developmental process
1.56 3.25e-02 GO:2000145 regulation of cell motility
1.37 3.28e-02 GO:0048666 neuron development
1.50 3.45e-02 GO:0051093 negative regulation of developmental process
1.56 3.61e-02 GO:0030334 regulation of cell migration
1.21 3.70e-02 GO:0023051 regulation of signaling

Gene overrepresentation in compartment category:

enrichment   p-value GO term description
1.13 3.14e-13 GO:0005737 cytoplasm
1.08 2.06e-11 GO:0044424 intracellular part
1.08 9.57e-10 GO:0005622 intracellular
1.12 1.65e-05 GO:0044444 cytoplasmic part
1.07 2.35e-04 GO:0043226 organelle
1.07 3.12e-04 GO:0043229 intracellular organelle
1.71 7.95e-03 GO:0005912 adherens junction
1.28 9.90e-03 GO:0042995 cell projection
1.06 1.35e-02 GO:0043227 membrane-bounded organelle
1.06 1.36e-02 GO:0043231 intracellular membrane-bounded organelle
1.39 4.24e-02 GO:0043005 neuron projection
1.27 4.56e-02 GO:0031982 vesicle

Gene overrepresentation in function category:

enrichment   p-value GO term description
1.12 6.00e-08 GO:0005515 protein binding
1.06 9.33e-05 GO:0005488 binding