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Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates

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Results for AAGGUGC

Z-value: 0.55

Motif logo

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miRNA associated with seed AAGGUGC

NamemiRBASE accession
hsa-miR-18a-5p
MIMAT0000072
hsa-miR-18b-5p
MIMAT0001412
hsa-miR-4735-3p
MIMAT0019861

Activity profile of AAGGUGC motif

Sorted Z-values of AAGGUGC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of AAGGUGC

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr22_+_38093005 0.24 ENST00000406386.3
 TRIOBP
 TRIO and F-actin binding protein
chr6_-_132272504 0.21 ENST00000367976.3
 CTGF
 connective tissue growth factor
chr3_+_42695176 0.14 ENST00000232974.6
ENST00000457842.3
 ZBTB47
 zinc finger and BTB domain containing 47
chr20_+_34700333 0.14 ENST00000441639.1
 EPB41L1
 erythrocyte membrane protein band 4.1-like 1
chr6_+_39760783 0.13 ENST00000398904.2
ENST00000538976.1
 DAAM2
 dishevelled associated activator of morphogenesis 2
chr5_-_180288248 0.13 ENST00000512132.1
ENST00000506439.1
ENST00000502412.1
ENST00000359141.6
 ZFP62
 ZFP62 zinc finger protein
chr3_-_114790179 0.12 ENST00000462705.1
 ZBTB20
 zinc finger and BTB domain containing 20
chr9_-_74383799 0.12 ENST00000377044.4
 TMEM2
 transmembrane protein 2
chr12_+_12764773 0.12 ENST00000228865.2
 CREBL2
 cAMP responsive element binding protein-like 2
chr2_+_46926048 0.11 ENST00000306503.5
 SOCS5
 suppressor of cytokine signaling 5
chr3_+_105085734 0.11 ENST00000306107.5
 ALCAM
 activated leukocyte cell adhesion molecule
chr9_-_123639600 0.10 ENST00000373896.3
 PHF19
 PHD finger protein 19
chr5_-_59189545 0.10 ENST00000340635.6
 PDE4D
 phosphodiesterase 4D, cAMP-specific
chr7_-_100287071 0.09 ENST00000275732.5
 GIGYF1
 GRB10 interacting GYF protein 1
chr4_+_55524085 0.09 ENST00000412167.2
ENST00000288135.5
 KIT
 v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
chr11_+_108093839 0.09 ENST00000452508.2
 ATM
 ataxia telangiectasia mutated
chr10_-_81205373 0.09 ENST00000372336.3
 ZCCHC24
 zinc finger, CCHC domain containing 24
chr17_+_27717415 0.09 ENST00000583121.1
ENST00000261716.3
 TAOK1
 TAO kinase 1
chr9_-_99180597 0.09 ENST00000375256.4
 ZNF367
 zinc finger protein 367
chr9_+_118916082 0.09 ENST00000328252.3
 PAPPA
 pregnancy-associated plasma protein A, pappalysin 1
chr15_-_56209306 0.08 ENST00000506154.1
ENST00000338963.2
ENST00000508342.1
 NEDD4
 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
chr1_+_201617450 0.08 ENST00000295624.6
ENST00000367297.4
ENST00000367300.3
 NAV1
 neuron navigator 1
chr5_-_171711061 0.08 ENST00000393792.2
 UBTD2
 ubiquitin domain containing 2
chr6_-_111136513 0.08 ENST00000368911.3
 CDK19
 cyclin-dependent kinase 19
chr4_-_125633876 0.08 ENST00000504087.1
ENST00000515641.1
 ANKRD50
 ankyrin repeat domain 50
chr2_+_235860616 0.08 ENST00000392011.2
 SH3BP4
 SH3-domain binding protein 4
chr2_+_24714729 0.07 ENST00000406961.1
ENST00000405141.1
 NCOA1
 nuclear receptor coactivator 1
chr1_+_173684047 0.07 ENST00000546011.1
ENST00000209884.4
 KLHL20
 kelch-like family member 20
chr4_-_157892498 0.07 ENST00000502773.1
 PDGFC
 platelet derived growth factor C
chr2_-_163695128 0.07 ENST00000332142.5
 KCNH7
 potassium voltage-gated channel, subfamily H (eag-related), member 7
chr7_-_111846435 0.07 ENST00000437633.1
ENST00000428084.1
 DOCK4
 dedicator of cytokinesis 4
chr3_+_187930719 0.07 ENST00000312675.4
 LPP
 LIM domain containing preferred translocation partner in lipoma
chr15_-_61521495 0.06 ENST00000335670.6
 RORA
 RAR-related orphan receptor A
chr16_+_69599861 0.06 ENST00000354436.2
 NFAT5
 nuclear factor of activated T-cells 5, tonicity-responsive
chr16_-_17564738 0.06 ENST00000261381.6
 XYLT1
 xylosyltransferase I
chr2_-_153032484 0.06 ENST00000263904.4
 STAM2
 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
chr15_+_76629064 0.06 ENST00000290759.4
 ISL2
 ISL LIM homeobox 2
chr1_+_162467595 0.06 ENST00000538489.1
ENST00000489294.1
 UHMK1
 U2AF homology motif (UHM) kinase 1
chr13_-_77601282 0.06 ENST00000355619.5
 FBXL3
 F-box and leucine-rich repeat protein 3
chr5_-_142783175 0.06 ENST00000231509.3
ENST00000394464.2
 NR3C1
 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
chr1_-_20812690 0.06 ENST00000375078.3
 CAMK2N1
 calcium/calmodulin-dependent protein kinase II inhibitor 1
chr5_+_122424816 0.06 ENST00000407847.4
 PRDM6
 PR domain containing 6
chr16_+_28996114 0.05 ENST00000395461.3
 LAT
 linker for activation of T cells
chr5_-_73937244 0.05 ENST00000302351.4
ENST00000510316.1
ENST00000508331.1
 ENC1
 ectodermal-neural cortex 1 (with BTB domain)
chr9_+_91003271 0.05 ENST00000375859.3
ENST00000541629.1
 SPIN1
 spindlin 1
chr12_+_104458235 0.05 ENST00000229330.4
 HCFC2
 host cell factor C2
chr17_+_68165657 0.05 ENST00000243457.3
 KCNJ2
 potassium inwardly-rectifying channel, subfamily J, member 2
chr2_+_173940442 0.05 ENST00000409176.2
ENST00000338983.3
ENST00000431503.2
 MLTK
 Mitogen-activated protein kinase kinase kinase MLT
chr11_+_109964087 0.05 ENST00000278590.3
 ZC3H12C
 zinc finger CCCH-type containing 12C
chrX_-_19905703 0.05 ENST00000397821.3
 SH3KBP1
 SH3-domain kinase binding protein 1
chr18_+_48086440 0.05 ENST00000400384.2
ENST00000540640.1
ENST00000592595.1
 MAPK4
 mitogen-activated protein kinase 4
chr1_+_38259540 0.04 ENST00000397631.3
 MANEAL
 mannosidase, endo-alpha-like
chr5_+_125935960 0.04 ENST00000297540.4
 PHAX
 phosphorylated adaptor for RNA export
chr1_-_161993616 0.04 ENST00000294794.3
 OLFML2B
 olfactomedin-like 2B
chr6_+_16238786 0.04 ENST00000259727.4
 GMPR
 guanosine monophosphate reductase
chr10_-_119806085 0.04 ENST00000355624.3
 RAB11FIP2
 RAB11 family interacting protein 2 (class I)
chr20_+_43595115 0.04 ENST00000372806.3
ENST00000396731.4
ENST00000372801.1
ENST00000499879.2
 STK4
 serine/threonine kinase 4
chr2_+_45168875 0.04 ENST00000260653.3
 SIX3
 SIX homeobox 3
chr2_+_12857015 0.03 ENST00000155926.4
 TRIB2
 tribbles pseudokinase 2
chr3_+_152017181 0.03 ENST00000498502.1
ENST00000324196.5
ENST00000545754.1
ENST00000357472.3
 MBNL1
 muscleblind-like splicing regulator 1
chr1_-_51425902 0.03 ENST00000396153.2
 FAF1
 Fas (TNFRSF6) associated factor 1
chr7_-_121036337 0.03 ENST00000426156.1
ENST00000359943.3
ENST00000412653.1
 FAM3C
 family with sequence similarity 3, member C
chr20_+_5107420 0.03 ENST00000460006.1
 CDS2
 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2
chr1_-_70820357 0.03 ENST00000370944.4
ENST00000262346.6
 ANKRD13C
 ankyrin repeat domain 13C
chr7_+_66386204 0.03 ENST00000341567.4
ENST00000607045.1
 TMEM248
 transmembrane protein 248
chr16_+_71879861 0.03 ENST00000427980.2
ENST00000568581.1
 ATXN1L
IST1
 ataxin 1-like
increased sodium tolerance 1 homolog (yeast)
chr16_-_85722530 0.03 ENST00000253462.3
 GINS2
 GINS complex subunit 2 (Psf2 homolog)
chr12_+_94542459 0.03 ENST00000258526.4
 PLXNC1
 plexin C1
chr17_+_40834580 0.03 ENST00000264638.4
 CNTNAP1
 contactin associated protein 1
chr15_+_39873268 0.03 ENST00000397591.2
ENST00000260356.5
 THBS1
 thrombospondin 1
chr17_-_62340581 0.03 ENST00000258991.3
ENST00000583738.1
ENST00000584379.1
 TEX2
 testis expressed 2
chr17_-_1395954 0.03 ENST00000359786.5
 MYO1C
 myosin IC
chr4_+_6784401 0.02 ENST00000425103.1
ENST00000307659.5
 KIAA0232
 KIAA0232
chr3_+_171758344 0.02 ENST00000336824.4
ENST00000423424.1
 FNDC3B
 fibronectin type III domain containing 3B
chr7_+_90225796 0.02 ENST00000380050.3
 CDK14
 cyclin-dependent kinase 14
chr20_+_56884752 0.02 ENST00000244040.3
 RAB22A
 RAB22A, member RAS oncogene family
chr10_+_111767720 0.02 ENST00000356080.4
ENST00000277900.8
 ADD3
 adducin 3 (gamma)
chr22_+_40573921 0.02 ENST00000454349.2
ENST00000335727.9
 TNRC6B
 trinucleotide repeat containing 6B
chr1_-_57889687 0.02 ENST00000371236.2
ENST00000371230.1
 DAB1
 Dab, reelin signal transducer, homolog 1 (Drosophila)
chr6_-_11232891 0.02 ENST00000379433.5
ENST00000379446.5
 NEDD9
 neural precursor cell expressed, developmentally down-regulated 9
chr19_+_50879705 0.02 ENST00000598168.1
ENST00000411902.2
ENST00000253727.5
ENST00000597790.1
ENST00000597130.1
ENST00000599105.1
 NR1H2
 nuclear receptor subfamily 1, group H, member 2
chr1_-_120612240 0.02 ENST00000256646.2
 NOTCH2
 notch 2
chr5_+_108083517 0.02 ENST00000281092.4
ENST00000536402.1
 FER
 fer (fps/fes related) tyrosine kinase
chrX_-_24045303 0.02 ENST00000328046.8
 KLHL15
 kelch-like family member 15
chr15_-_90294523 0.02 ENST00000300057.4
 MESP1
 mesoderm posterior 1 homolog (mouse)
chr20_+_30865429 0.02 ENST00000375712.3
 KIF3B
 kinesin family member 3B
chr1_+_78245303 0.02 ENST00000370791.3
ENST00000443751.2
 FAM73A
 family with sequence similarity 73, member A
chr8_-_145701718 0.02 ENST00000377317.4
 FOXH1
 forkhead box H1
chr19_-_36523709 0.02 ENST00000592017.1
ENST00000360535.4
 CLIP3
 CAP-GLY domain containing linker protein 3
chr3_+_85008089 0.02 ENST00000383699.3
 CADM2
 cell adhesion molecule 2
chr1_+_84543734 0.02 ENST00000370689.2
 PRKACB
 protein kinase, cAMP-dependent, catalytic, beta
chr12_-_56583332 0.02 ENST00000347471.4
ENST00000267064.4
ENST00000394023.3
 SMARCC2
 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
chr3_+_141205852 0.02 ENST00000286364.3
ENST00000452898.1
 RASA2
 RAS p21 protein activator 2
chr6_+_112408768 0.02 ENST00000368656.2
ENST00000604268.1
 FAM229B
 family with sequence similarity 229, member B
chr4_+_154125565 0.02 ENST00000338700.5
 TRIM2
 tripartite motif containing 2
chr19_+_3572925 0.02 ENST00000333651.6
ENST00000417382.1
ENST00000453933.1
ENST00000262949.7
 HMG20B
 high mobility group 20B
chr4_-_42659102 0.01 ENST00000264449.10
ENST00000510289.1
ENST00000381668.5
 ATP8A1
 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
chr10_+_133918175 0.01 ENST00000298622.4
 JAKMIP3
 Janus kinase and microtubule interacting protein 3
chr10_+_102295616 0.01 ENST00000299163.6
 HIF1AN
 hypoxia inducible factor 1, alpha subunit inhibitor
chr12_+_69864129 0.01 ENST00000547219.1
ENST00000299293.2
ENST00000549921.1
ENST00000550316.1
ENST00000548154.1
ENST00000547414.1
ENST00000550389.1
ENST00000550937.1
ENST00000549092.1
ENST00000550169.1
 FRS2
 fibroblast growth factor receptor substrate 2
chr9_+_108424738 0.01 ENST00000334077.3
 TAL2
 T-cell acute lymphocytic leukemia 2
chr9_+_15553055 0.01 ENST00000380701.3
 CCDC171
 coiled-coil domain containing 171
chr2_+_36582857 0.01 ENST00000280527.2
 CRIM1
 cysteine rich transmembrane BMP regulator 1 (chordin-like)
chr8_+_8860314 0.01 ENST00000250263.7
ENST00000519292.1
 ERI1
 exoribonuclease 1
chr1_+_22379120 0.01 ENST00000400259.1
ENST00000344548.3
 CDC42
 cell division cycle 42
chrX_+_108780062 0.01 ENST00000372106.1
 NXT2
 nuclear transport factor 2-like export factor 2
chr1_-_109506036 0.01 ENST00000369976.1
ENST00000356970.2
ENST00000369971.2
ENST00000415331.1
ENST00000357393.4
 CLCC1
AKNAD1
 chloride channel CLIC-like 1
AKNA domain containing 1
chr20_+_43104508 0.01 ENST00000262605.4
ENST00000372904.3
 TTPAL
 tocopherol (alpha) transfer protein-like
chr14_+_52456327 0.01 ENST00000556760.1
 C14orf166
 chromosome 14 open reading frame 166
chr16_+_30960375 0.01 ENST00000318663.4
ENST00000566237.1
ENST00000562699.1
 ORAI3
 ORAI calcium release-activated calcium modulator 3
chr4_-_186877502 0.01 ENST00000431902.1
ENST00000284776.7
ENST00000415274.1
 SORBS2
 sorbin and SH3 domain containing 2
chr14_+_55518349 0.01 ENST00000395468.4
 MAPK1IP1L
 mitogen-activated protein kinase 1 interacting protein 1-like
chr15_-_34628951 0.01 ENST00000397707.2
ENST00000560611.1
 SLC12A6
 solute carrier family 12 (potassium/chloride transporter), member 6
chr20_+_277737 0.01 ENST00000382352.3
 ZCCHC3
 zinc finger, CCHC domain containing 3
chr10_-_98273668 0.01 ENST00000357947.3
 TLL2
 tolloid-like 2
chr5_-_43313574 0.01 ENST00000325110.6
ENST00000433297.2
 HMGCS1
 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chr12_+_49212514 0.01 ENST00000301050.2
ENST00000548279.1
ENST00000547230.1
 CACNB3
 calcium channel, voltage-dependent, beta 3 subunit
chr21_+_38071430 0.01 ENST00000290399.6
 SIM2
 single-minded family bHLH transcription factor 2
chr5_+_96271141 0.01 ENST00000231368.5
 LNPEP
 leucyl/cystinyl aminopeptidase
chr16_+_77822427 0.01 ENST00000302536.2
 VAT1L
 vesicle amine transport 1-like
chr10_+_72575643 0.00 ENST00000373202.3
 SGPL1
 sphingosine-1-phosphate lyase 1
chr17_+_46985731 0.00 ENST00000360943.5
 UBE2Z
 ubiquitin-conjugating enzyme E2Z
chr12_-_56652111 0.00 ENST00000267116.7
 ANKRD52
 ankyrin repeat domain 52
chr7_-_44924939 0.00 ENST00000395699.2
 PURB
 purine-rich element binding protein B
chr18_-_45456930 0.00 ENST00000262160.6
ENST00000587269.1
 SMAD2
 SMAD family member 2
chr7_+_129074266 0.00 ENST00000249344.2
ENST00000435494.2
 STRIP2
 striatin interacting protein 2
chr17_-_7382834 0.00 ENST00000380599.4
 ZBTB4
 zinc finger and BTB domain containing 4
chr22_-_44258360 0.00 ENST00000330884.4
ENST00000249130.5
 SULT4A1
 sulfotransferase family 4A, member 1
chr17_-_27621125 0.00 ENST00000579665.1
ENST00000225388.4
 NUFIP2
 nuclear fragile X mental retardation protein interacting protein 2
chr9_-_93405352 0.00 ENST00000375765.3
 DIRAS2
 DIRAS family, GTP-binding RAS-like 2
chr16_-_74640986 0.00 ENST00000422840.2
ENST00000565260.1
ENST00000447066.2
ENST00000205061.5
 GLG1
 golgi glycoprotein 1
chr6_-_99873145 0.00 ENST00000369239.5
ENST00000438806.1
 PNISR
 PNN-interacting serine/arginine-rich protein
chr5_+_31193847 0.00 ENST00000514738.1
ENST00000265071.2
 CDH6
 cadherin 6, type 2, K-cadherin (fetal kidney)
chr11_-_116968987 0.00 ENST00000434315.2
ENST00000292055.4
ENST00000375288.1
ENST00000542607.1
ENST00000445177.1
ENST00000375300.1
ENST00000446921.2
 SIK3
 SIK family kinase 3
chr12_-_44200052 0.00 ENST00000548315.1
ENST00000552521.1
ENST00000546662.1
ENST00000548403.1
ENST00000546506.1
 TWF1
 twinfilin actin-binding protein 1
chrX_+_150565653 0.00 ENST00000330374.6
 VMA21
 VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0034059 response to anoxia(GO:0034059)
0.0 0.2 GO:0030047 actin modification(GO:0030047)
0.0 0.1 GO:0036216 response to stem cell factor(GO:0036215) cellular response to stem cell factor stimulus(GO:0036216) Kit signaling pathway(GO:0038109)
0.0 0.1 GO:1904882 signal transduction involved in G2 DNA damage checkpoint(GO:0072425) signal transduction involved in mitotic G2 DNA damage checkpoint(GO:0072434) telomerase catalytic core complex assembly(GO:1904868) regulation of telomerase catalytic core complex assembly(GO:1904882) positive regulation of telomerase catalytic core complex assembly(GO:1904884)
0.0 0.1 GO:0045925 positive regulation of female receptivity(GO:0045925)
0.0 0.1 GO:0044111 development involved in symbiotic interaction(GO:0044111)
0.0 0.1 GO:0021524 visceral motor neuron differentiation(GO:0021524)
0.0 0.1 GO:1904694 negative regulation of vascular smooth muscle contraction(GO:1904694)
0.0 0.0 GO:0090076 relaxation of skeletal muscle(GO:0090076)
0.0 0.1 GO:0045629 negative regulation of T-helper 2 cell differentiation(GO:0045629)
0.0 0.0 GO:0009946 proximal/distal axis specification(GO:0009946) neuroblast differentiation(GO:0014016)
0.0 0.1 GO:0086024 adrenergic receptor signaling pathway involved in positive regulation of heart rate(GO:0086024)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0033565 ESCRT-0 complex(GO:0033565)
0.0 0.1 GO:0071598 neuronal ribonucleoprotein granule(GO:0071598)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0019961 interferon binding(GO:0019961)
0.0 0.2 GO:0045159 myosin II binding(GO:0045159)
0.0 0.1 GO:0008427 calcium-dependent protein kinase inhibitor activity(GO:0008427)
0.0 0.1 GO:0038049 transcription factor activity, ligand-activated RNA polymerase II transcription factor binding(GO:0038049)
0.0 0.1 GO:0004677 DNA-dependent protein kinase activity(GO:0004677)
0.0 0.1 GO:0004415 hyalurononglucosaminidase activity(GO:0004415)
0.0 0.1 GO:0050815 phosphoserine binding(GO:0050815) phosphothreonine binding(GO:0050816)
0.0 0.0 GO:0030158 protein xylosyltransferase activity(GO:0030158)