Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates
Name | miRBASE accession |
---|---|
hsa-miR-10a-5p
|
MIMAT0000253 |
hsa-miR-10b-5p
|
MIMAT0000254 |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_167181917 | 0.64 |
ENST00000519204.1 |
TENM2 |
teneurin transmembrane protein 2 |
chr18_+_19749386 | 0.33 |
ENST00000269216.3 |
GATA6 |
GATA binding protein 6 |
chr11_-_115375107 | 0.27 |
ENST00000545380.1 ENST00000452722.3 ENST00000537058.1 ENST00000536727.1 ENST00000542447.2 ENST00000331581.6 |
CADM1 |
cell adhesion molecule 1 |
chr9_-_23821273 | 0.25 |
ENST00000380110.4 |
ELAVL2 |
ELAV like neuron-specific RNA binding protein 2 |
chr1_-_9970227 | 0.25 |
ENST00000377263.1 |
CTNNBIP1 |
catenin, beta interacting protein 1 |
chr8_-_66754172 | 0.25 |
ENST00000401827.3 |
PDE7A |
phosphodiesterase 7A |
chr7_+_20370746 | 0.22 |
ENST00000222573.4 |
ITGB8 |
integrin, beta 8 |
chr1_-_19283163 | 0.22 |
ENST00000455833.2 |
IFFO2 |
intermediate filament family orphan 2 |
chr2_+_64681219 | 0.21 |
ENST00000238875.5 |
LGALSL |
lectin, galactoside-binding-like |
chr20_+_55204351 | 0.20 |
ENST00000201031.2 |
TFAP2C |
transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) |
chr1_-_217262969 | 0.19 |
ENST00000361525.3 |
ESRRG |
estrogen-related receptor gamma |
chr22_+_51112800 | 0.19 |
ENST00000414786.2 |
SHANK3 |
SH3 and multiple ankyrin repeat domains 3 |
chr6_+_15246501 | 0.18 |
ENST00000341776.2 |
JARID2 |
jumonji, AT rich interactive domain 2 |
chr7_-_44365020 | 0.16 |
ENST00000395747.2 ENST00000347193.4 ENST00000346990.4 ENST00000258682.6 ENST00000353625.4 ENST00000421607.1 ENST00000424197.1 ENST00000502837.2 ENST00000350811.3 ENST00000395749.2 |
CAMK2B |
calcium/calmodulin-dependent protein kinase II beta |
chr15_+_42066632 | 0.15 |
ENST00000457542.2 ENST00000221214.6 ENST00000260357.7 ENST00000456763.2 |
MAPKBP1 |
mitogen-activated protein kinase binding protein 1 |
chr6_-_91006461 | 0.14 |
ENST00000257749.4 ENST00000343122.3 ENST00000406998.2 ENST00000453877.1 |
BACH2 |
BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
chrX_-_129402857 | 0.14 |
ENST00000447817.1 ENST00000370978.4 |
ZNF280C |
zinc finger protein 280C |
chr10_-_62149433 | 0.12 |
ENST00000280772.2 |
ANK3 |
ankyrin 3, node of Ranvier (ankyrin G) |
chr2_-_208030647 | 0.11 |
ENST00000309446.6 |
KLF7 |
Kruppel-like factor 7 (ubiquitous) |
chr7_-_138666053 | 0.11 |
ENST00000440172.1 ENST00000422774.1 |
KIAA1549 |
KIAA1549 |
chr7_-_92463210 | 0.11 |
ENST00000265734.4 |
CDK6 |
cyclin-dependent kinase 6 |
chr2_-_20424844 | 0.11 |
ENST00000403076.1 ENST00000254351.4 |
SDC1 |
syndecan 1 |
chr6_-_10415470 | 0.11 |
ENST00000379604.2 ENST00000379613.3 |
TFAP2A |
transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) |
chr9_+_112403088 | 0.11 |
ENST00000448454.2 |
PALM2 |
paralemmin 2 |
chr1_+_93544791 | 0.11 |
ENST00000545708.1 ENST00000540243.1 ENST00000370298.4 |
MTF2 |
metal response element binding transcription factor 2 |
chr5_+_149109825 | 0.11 |
ENST00000360453.4 ENST00000394320.3 ENST00000309241.5 |
PPARGC1B |
peroxisome proliferator-activated receptor gamma, coactivator 1 beta |
chr16_+_50187556 | 0.10 |
ENST00000561678.1 ENST00000357464.3 |
PAPD5 |
PAP associated domain containing 5 |
chr3_+_14989076 | 0.09 |
ENST00000413118.1 ENST00000425241.1 |
NR2C2 |
nuclear receptor subfamily 2, group C, member 2 |
chr4_-_100575781 | 0.09 |
ENST00000511828.1 |
RP11-766F14.2 |
Protein LOC285556 |
chr2_+_238536207 | 0.08 |
ENST00000308482.9 |
LRRFIP1 |
leucine rich repeat (in FLII) interacting protein 1 |
chr6_-_11044509 | 0.08 |
ENST00000354666.3 |
ELOVL2 |
ELOVL fatty acid elongase 2 |
chr2_-_160472952 | 0.08 |
ENST00000541068.2 ENST00000355831.2 ENST00000343439.5 ENST00000392782.1 |
BAZ2B |
bromodomain adjacent to zinc finger domain, 2B |
chr4_+_3076388 | 0.08 |
ENST00000355072.5 |
HTT |
huntingtin |
chr16_-_70719925 | 0.08 |
ENST00000338779.6 |
MTSS1L |
metastasis suppressor 1-like |
chr14_+_23775971 | 0.07 |
ENST00000250405.5 |
BCL2L2 |
BCL2-like 2 |
chr14_+_33408449 | 0.07 |
ENST00000346562.2 ENST00000341321.4 ENST00000548645.1 ENST00000356141.4 ENST00000357798.5 |
NPAS3 |
neuronal PAS domain protein 3 |
chr17_-_29151794 | 0.07 |
ENST00000324238.6 |
CRLF3 |
cytokine receptor-like factor 3 |
chr1_-_39339777 | 0.06 |
ENST00000397572.2 |
MYCBP |
MYC binding protein |
chr17_+_44928946 | 0.06 |
ENST00000290015.2 ENST00000393461.2 |
WNT9B |
wingless-type MMTV integration site family, member 9B |
chr7_-_112430647 | 0.06 |
ENST00000312814.6 |
TMEM168 |
transmembrane protein 168 |
chr19_-_14316980 | 0.06 |
ENST00000361434.3 ENST00000340736.6 |
LPHN1 |
latrophilin 1 |
chr1_-_94374946 | 0.06 |
ENST00000370238.3 |
GCLM |
glutamate-cysteine ligase, modifier subunit |
chr14_+_70078303 | 0.06 |
ENST00000342745.4 |
KIAA0247 |
KIAA0247 |
chr9_-_74980113 | 0.06 |
ENST00000376962.5 ENST00000376960.4 ENST00000237937.3 |
ZFAND5 |
zinc finger, AN1-type domain 5 |
chr11_+_20620946 | 0.06 |
ENST00000525748.1 |
SLC6A5 |
solute carrier family 6 (neurotransmitter transporter), member 5 |
chr9_+_77112244 | 0.05 |
ENST00000376896.3 |
RORB |
RAR-related orphan receptor B |
chr8_+_22857048 | 0.05 |
ENST00000251822.6 |
RHOBTB2 |
Rho-related BTB domain containing 2 |
chr19_+_13229126 | 0.05 |
ENST00000292431.4 |
NACC1 |
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing |
chr10_-_128994422 | 0.04 |
ENST00000522781.1 |
FAM196A |
family with sequence similarity 196, member A |
chr9_-_127533519 | 0.04 |
ENST00000487099.2 ENST00000344523.4 ENST00000373584.3 |
NR6A1 |
nuclear receptor subfamily 6, group A, member 1 |
chr3_+_48956249 | 0.04 |
ENST00000452882.1 ENST00000430423.1 ENST00000356401.4 ENST00000449376.1 ENST00000420814.1 ENST00000449729.1 ENST00000433170.1 |
ARIH2 |
ariadne RBR E3 ubiquitin protein ligase 2 |
chr19_-_55954230 | 0.04 |
ENST00000376325.4 |
SHISA7 |
shisa family member 7 |
chr8_-_4852218 | 0.04 |
ENST00000400186.3 ENST00000602723.1 |
CSMD1 |
CUB and Sushi multiple domains 1 |
chr18_-_33647487 | 0.04 |
ENST00000590898.1 ENST00000357384.4 ENST00000319040.6 ENST00000588737.1 ENST00000399022.4 |
RPRD1A |
regulation of nuclear pre-mRNA domain containing 1A |
chr5_-_45696253 | 0.03 |
ENST00000303230.4 |
HCN1 |
hyperpolarization activated cyclic nucleotide-gated potassium channel 1 |
chr5_-_160973649 | 0.03 |
ENST00000393959.1 ENST00000517547.1 |
GABRB2 |
gamma-aminobutyric acid (GABA) A receptor, beta 2 |
chr18_+_43914159 | 0.03 |
ENST00000588679.1 ENST00000269439.7 ENST00000543885.1 |
RNF165 |
ring finger protein 165 |
chr22_+_39898325 | 0.03 |
ENST00000325301.2 ENST00000404569.1 |
MIEF1 |
mitochondrial elongation factor 1 |
chr14_-_47812321 | 0.03 |
ENST00000357362.3 ENST00000486952.2 ENST00000426342.1 |
MDGA2 |
MAM domain containing glycosylphosphatidylinositol anchor 2 |
chr11_+_66025167 | 0.03 |
ENST00000394067.2 ENST00000316924.5 ENST00000421552.1 ENST00000394078.1 |
KLC2 |
kinesin light chain 2 |
chrX_+_49687216 | 0.03 |
ENST00000376088.3 |
CLCN5 |
chloride channel, voltage-sensitive 5 |
chr4_-_146859623 | 0.03 |
ENST00000379448.4 ENST00000513320.1 |
ZNF827 |
zinc finger protein 827 |
chr2_+_28615669 | 0.03 |
ENST00000379619.1 ENST00000264716.4 |
FOSL2 |
FOS-like antigen 2 |
chr2_-_69870835 | 0.02 |
ENST00000409085.4 ENST00000406297.3 |
AAK1 |
AP2 associated kinase 1 |
chr19_+_19496624 | 0.02 |
ENST00000494516.2 ENST00000360315.3 ENST00000252577.5 |
GATAD2A |
GATA zinc finger domain containing 2A |
chr3_-_179754706 | 0.02 |
ENST00000465751.1 ENST00000467460.1 |
PEX5L |
peroxisomal biogenesis factor 5-like |
chr2_+_176981307 | 0.02 |
ENST00000249501.4 |
HOXD10 |
homeobox D10 |
chr21_-_32931290 | 0.02 |
ENST00000286827.3 |
TIAM1 |
T-cell lymphoma invasion and metastasis 1 |
chr1_-_39347255 | 0.02 |
ENST00000454994.2 ENST00000357771.3 |
GJA9 |
gap junction protein, alpha 9, 59kDa |
chrX_-_54384425 | 0.02 |
ENST00000375169.3 ENST00000354646.2 |
WNK3 |
WNK lysine deficient protein kinase 3 |
chr1_+_57110972 | 0.02 |
ENST00000371244.4 |
PRKAA2 |
protein kinase, AMP-activated, alpha 2 catalytic subunit |
chr3_+_107241783 | 0.02 |
ENST00000415149.2 ENST00000402543.1 ENST00000325805.8 ENST00000427402.1 |
BBX |
bobby sox homolog (Drosophila) |
chr4_-_111119804 | 0.02 |
ENST00000394607.3 ENST00000302274.3 |
ELOVL6 |
ELOVL fatty acid elongase 6 |
chr12_+_125811162 | 0.02 |
ENST00000299308.3 |
TMEM132B |
transmembrane protein 132B |
chr9_-_95527079 | 0.02 |
ENST00000356884.6 ENST00000375512.3 |
BICD2 |
bicaudal D homolog 2 (Drosophila) |
chr6_+_116421976 | 0.02 |
ENST00000319550.4 ENST00000419791.1 |
NT5DC1 |
5'-nucleotidase domain containing 1 |
chr10_-_121632266 | 0.02 |
ENST00000360003.3 ENST00000369077.3 |
MCMBP |
minichromosome maintenance complex binding protein |
chr5_+_179921430 | 0.02 |
ENST00000393356.1 |
CNOT6 |
CCR4-NOT transcription complex, subunit 6 |
chr2_+_166326157 | 0.02 |
ENST00000421875.1 ENST00000314499.7 ENST00000409664.1 |
CSRNP3 |
cysteine-serine-rich nuclear protein 3 |
chr7_-_106301405 | 0.02 |
ENST00000523505.1 |
CCDC71L |
coiled-coil domain containing 71-like |
chr17_-_79479789 | 0.02 |
ENST00000571691.1 ENST00000571721.1 ENST00000573283.1 ENST00000575842.1 ENST00000575087.1 ENST00000570382.1 ENST00000331925.2 |
ACTG1 |
actin, gamma 1 |
chr8_+_1449532 | 0.02 |
ENST00000421627.2 |
DLGAP2 |
discs, large (Drosophila) homolog-associated protein 2 |
chr15_-_65715401 | 0.01 |
ENST00000352385.2 |
IGDCC4 |
immunoglobulin superfamily, DCC subclass, member 4 |
chr4_+_79697495 | 0.01 |
ENST00000502871.1 ENST00000335016.5 |
BMP2K |
BMP2 inducible kinase |
chr22_+_30279144 | 0.01 |
ENST00000401950.2 ENST00000333027.3 ENST00000445401.1 ENST00000323630.5 ENST00000351488.3 |
MTMR3 |
myotubularin related protein 3 |
chr3_+_238273 | 0.01 |
ENST00000256509.2 |
CHL1 |
cell adhesion molecule L1-like |
chr22_+_45559722 | 0.01 |
ENST00000347635.4 ENST00000407019.2 ENST00000424634.1 ENST00000417702.1 ENST00000425733.2 ENST00000430547.1 |
NUP50 |
nucleoporin 50kDa |
chr12_-_77459306 | 0.01 |
ENST00000547316.1 ENST00000416496.2 ENST00000550669.1 ENST00000322886.7 |
E2F7 |
E2F transcription factor 7 |
chr4_+_134070439 | 0.01 |
ENST00000264360.5 |
PCDH10 |
protocadherin 10 |
chr8_-_41655107 | 0.01 |
ENST00000347528.4 ENST00000289734.7 ENST00000379758.2 ENST00000396945.1 ENST00000396942.1 ENST00000352337.4 |
ANK1 |
ankyrin 1, erythrocytic |
chr3_-_196159268 | 0.01 |
ENST00000381887.3 ENST00000535858.1 ENST00000428095.1 ENST00000296328.4 |
UBXN7 |
UBX domain protein 7 |
chr2_+_111878483 | 0.01 |
ENST00000308659.8 ENST00000357757.2 ENST00000393253.2 ENST00000337565.5 ENST00000393256.3 |
BCL2L11 |
BCL2-like 11 (apoptosis facilitator) |
chr1_+_202976493 | 0.01 |
ENST00000367242.3 |
TMEM183A |
transmembrane protein 183A |
chr16_+_57126428 | 0.01 |
ENST00000290776.8 |
CPNE2 |
copine II |
chr10_-_88281494 | 0.01 |
ENST00000298767.5 |
WAPAL |
wings apart-like homolog (Drosophila) |
chr12_-_14956396 | 0.01 |
ENST00000535328.1 ENST00000261167.2 |
WBP11 |
WW domain binding protein 11 |
chr1_+_28052456 | 0.01 |
ENST00000373954.6 ENST00000419687.2 |
FAM76A |
family with sequence similarity 76, member A |
chr19_+_1407517 | 0.01 |
ENST00000336761.6 ENST00000233078.4 |
DAZAP1 |
DAZ associated protein 1 |
chr7_+_94139105 | 0.01 |
ENST00000297273.4 |
CASD1 |
CAS1 domain containing 1 |
chr10_+_98592009 | 0.01 |
ENST00000540664.1 ENST00000371103.3 |
LCOR |
ligand dependent nuclear receptor corepressor |
chr17_+_36861735 | 0.01 |
ENST00000378137.5 ENST00000325718.7 |
MLLT6 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 |
chr19_+_3880581 | 0.01 |
ENST00000450849.2 ENST00000301260.6 ENST00000398448.3 |
ATCAY |
ataxia, cerebellar, Cayman type |
chr14_+_99947715 | 0.00 |
ENST00000389879.5 ENST00000557441.1 ENST00000555049.1 ENST00000555842.1 |
CCNK |
cyclin K |
chr1_+_169337172 | 0.00 |
ENST00000367807.3 ENST00000367808.3 ENST00000329281.2 ENST00000420531.1 |
BLZF1 |
basic leucine zipper nuclear factor 1 |
chr17_-_27621125 | 0.00 |
ENST00000579665.1 ENST00000225388.4 |
NUFIP2 |
nuclear fragile X mental retardation protein interacting protein 2 |
chr3_-_142166904 | 0.00 |
ENST00000264951.4 |
XRN1 |
5'-3' exoribonuclease 1 |
chr17_-_73775839 | 0.00 |
ENST00000592643.1 ENST00000591890.1 ENST00000587171.1 ENST00000254810.4 ENST00000589599.1 |
H3F3B |
H3 histone, family 3B (H3.3B) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0032911 | negative regulation of transforming growth factor beta1 production(GO:0032911) |
0.1 | 0.2 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
0.1 | 0.3 | GO:0042271 | susceptibility to natural killer cell mediated cytotoxicity(GO:0042271) |
0.0 | 0.2 | GO:0048170 | positive regulation of long-term neuronal synaptic plasticity(GO:0048170) |
0.0 | 0.6 | GO:0097264 | self proteolysis(GO:0097264) |
0.0 | 0.1 | GO:0048627 | myoblast development(GO:0048627) |
0.0 | 0.1 | GO:0072660 | maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827) |
0.0 | 0.1 | GO:0003409 | optic cup structural organization(GO:0003409) |
0.0 | 0.1 | GO:0031587 | positive regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity(GO:0031587) |
0.0 | 0.1 | GO:0009786 | regulation of asymmetric cell division(GO:0009786) |
0.0 | 0.1 | GO:1900425 | negative regulation of defense response to bacterium(GO:1900425) |
0.0 | 0.1 | GO:0097069 | cellular response to thyroxine stimulus(GO:0097069) cellular response to L-phenylalanine derivative(GO:1904387) |
0.0 | 0.1 | GO:0061086 | negative regulation of histone H3-K27 methylation(GO:0061086) |
0.0 | 0.1 | GO:1904627 | response to phorbol 13-acetate 12-myristate(GO:1904627) cellular response to phorbol 13-acetate 12-myristate(GO:1904628) |
0.0 | 0.1 | GO:0006390 | transcription from mitochondrial promoter(GO:0006390) |
0.0 | 0.1 | GO:0034625 | fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626) |
0.0 | 0.1 | GO:0043634 | polyadenylation-dependent ncRNA catabolic process(GO:0043634) |
0.0 | 0.1 | GO:0060011 | Sertoli cell proliferation(GO:0060011) |
0.0 | 0.2 | GO:0051574 | positive regulation of histone H3-K9 methylation(GO:0051574) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | GO:0034686 | integrin alphav-beta8 complex(GO:0034686) |
0.0 | 0.1 | GO:0017109 | glutamate-cysteine ligase complex(GO:0017109) |
0.0 | 0.2 | GO:0030877 | beta-catenin destruction complex(GO:0030877) |
0.0 | 0.0 | GO:0098855 | HCN channel complex(GO:0098855) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | GO:0050682 | AF-2 domain binding(GO:0050682) |
0.0 | 0.2 | GO:1990430 | extracellular matrix protein binding(GO:1990430) |
0.0 | 0.1 | GO:0098770 | FBXO family protein binding(GO:0098770) |
0.0 | 0.2 | GO:0030160 | GKAP/Homer scaffold activity(GO:0030160) |
0.0 | 0.1 | GO:0004357 | glutamate-cysteine ligase activity(GO:0004357) |
0.0 | 0.1 | GO:0015375 | glycine:sodium symporter activity(GO:0015375) |
0.0 | 0.2 | GO:0070016 | armadillo repeat domain binding(GO:0070016) |
0.0 | 0.1 | GO:0102337 | fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |