Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates
Gene Symbol | Gene ID | Gene Info |
---|---|---|
GRHL1
|
ENSG00000134317.13 | GRHL1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
GRHL1 | hg19_v2_chr2_+_10091815_10091864, hg19_v2_chr2_+_10091783_10091811 | 0.36 | 3.7e-01 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_20806440 | 2.25 |
ENST00000400066.3 ENST00000400065.3 ENST00000356192.6 |
GJB6 |
gap junction protein, beta 6, 30kDa |
chr1_-_201368707 | 1.90 |
ENST00000391967.2 |
LAD1 |
ladinin 1 |
chr1_+_35247859 | 1.88 |
ENST00000373362.3 |
GJB3 |
gap junction protein, beta 3, 31kDa |
chr1_-_201368653 | 1.71 |
ENST00000367313.3 |
LAD1 |
ladinin 1 |
chr19_-_291133 | 1.48 |
ENST00000327790.3 |
PPAP2C |
phosphatidic acid phosphatase type 2C |
chr2_+_95940186 | 1.25 |
ENST00000403131.2 ENST00000317668.4 ENST00000317620.9 |
PROM2 |
prominin 2 |
chr3_-_172241250 | 1.11 |
ENST00000420541.2 ENST00000241261.2 |
TNFSF10 |
tumor necrosis factor (ligand) superfamily, member 10 |
chr19_+_45312347 | 1.10 |
ENST00000270233.6 ENST00000591520.1 |
BCAM |
basal cell adhesion molecule (Lutheran blood group) |
chr20_-_18038521 | 1.09 |
ENST00000278780.6 |
OVOL2 |
ovo-like zinc finger 2 |
chr2_+_95940220 | 0.70 |
ENST00000542147.1 |
PROM2 |
prominin 2 |
chr8_-_130799134 | 0.65 |
ENST00000276708.4 |
GSDMC |
gasdermin C |
chr1_-_24469602 | 0.64 |
ENST00000270800.1 |
IL22RA1 |
interleukin 22 receptor, alpha 1 |
chr1_-_153113927 | 0.45 |
ENST00000368752.4 |
SPRR2B |
small proline-rich protein 2B |
chr9_+_5450503 | 0.40 |
ENST00000381573.4 ENST00000381577.3 |
CD274 |
CD274 molecule |
chr1_+_155023757 | 0.36 |
ENST00000356955.2 ENST00000449910.2 ENST00000359280.4 ENST00000360674.4 ENST00000368412.3 ENST00000355956.2 ENST00000368410.2 ENST00000271836.6 ENST00000368413.1 ENST00000531455.1 ENST00000447332.3 |
ADAM15 |
ADAM metallopeptidase domain 15 |
chr1_+_44440575 | 0.35 |
ENST00000532642.1 ENST00000236067.4 ENST00000471859.2 |
ATP6V0B |
ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b |
chr19_-_15590306 | 0.34 |
ENST00000292609.4 |
PGLYRP2 |
peptidoglycan recognition protein 2 |
chr19_-_35981358 | 0.33 |
ENST00000484218.2 ENST00000338897.3 |
KRTDAP |
keratinocyte differentiation-associated protein |
chr6_+_32121218 | 0.31 |
ENST00000414204.1 ENST00000361568.2 ENST00000395523.1 |
PPT2 |
palmitoyl-protein thioesterase 2 |
chr19_+_1491144 | 0.30 |
ENST00000233596.3 |
REEP6 |
receptor accessory protein 6 |
chr1_-_16539094 | 0.29 |
ENST00000270747.3 |
ARHGEF19 |
Rho guanine nucleotide exchange factor (GEF) 19 |
chr11_+_706595 | 0.28 |
ENST00000531348.1 ENST00000530636.1 |
EPS8L2 |
EPS8-like 2 |
chr19_-_17356697 | 0.26 |
ENST00000291442.3 |
NR2F6 |
nuclear receptor subfamily 2, group F, member 6 |
chr19_+_19496728 | 0.26 |
ENST00000537887.1 ENST00000417582.2 |
GATAD2A |
GATA zinc finger domain containing 2A |
chr7_-_80551671 | 0.24 |
ENST00000419255.2 ENST00000544525.1 |
SEMA3C |
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C |
chr19_+_58038683 | 0.24 |
ENST00000240719.3 ENST00000376233.3 ENST00000594943.1 ENST00000602149.1 |
ZNF549 |
zinc finger protein 549 |
chr13_+_48807334 | 0.21 |
ENST00000378549.5 |
ITM2B |
integral membrane protein 2B |
chr9_+_130565487 | 0.21 |
ENST00000373225.3 ENST00000431857.1 |
FPGS |
folylpolyglutamate synthase |
chr6_+_168227611 | 0.21 |
ENST00000344191.4 ENST00000351017.4 ENST00000392108.3 ENST00000366806.2 ENST00000392112.1 ENST00000400824.4 ENST00000447894.2 ENST00000400822.3 |
MLLT4 |
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 |
chr17_+_9728828 | 0.20 |
ENST00000262441.5 |
GLP2R |
glucagon-like peptide 2 receptor |
chr2_+_113816215 | 0.19 |
ENST00000346807.3 |
IL36RN |
interleukin 36 receptor antagonist |
chr16_-_23568651 | 0.19 |
ENST00000563232.1 ENST00000563459.1 ENST00000449606.1 |
EARS2 |
glutamyl-tRNA synthetase 2, mitochondrial |
chr2_+_113299990 | 0.18 |
ENST00000537335.1 ENST00000417433.2 |
POLR1B |
polymerase (RNA) I polypeptide B, 128kDa |
chr3_-_49142504 | 0.18 |
ENST00000306125.6 ENST00000420147.2 |
QARS |
glutaminyl-tRNA synthetase |
chr18_-_35145593 | 0.18 |
ENST00000334919.5 ENST00000591282.1 ENST00000588597.1 |
CELF4 |
CUGBP, Elav-like family member 4 |
chr13_+_48807288 | 0.17 |
ENST00000378565.5 |
ITM2B |
integral membrane protein 2B |
chr3_-_49142178 | 0.16 |
ENST00000452739.1 ENST00000414533.1 ENST00000417025.1 |
QARS |
glutaminyl-tRNA synthetase |
chr12_+_49687425 | 0.16 |
ENST00000257860.4 |
PRPH |
peripherin |
chr18_+_9475001 | 0.16 |
ENST00000019317.4 |
RALBP1 |
ralA binding protein 1 |
chr18_-_35145728 | 0.15 |
ENST00000361795.5 ENST00000603232.1 |
CELF4 |
CUGBP, Elav-like family member 4 |
chr20_-_54967187 | 0.15 |
ENST00000422322.1 ENST00000371356.2 ENST00000451915.1 ENST00000347343.2 ENST00000395911.1 ENST00000395907.1 ENST00000441357.1 ENST00000456249.1 ENST00000420474.1 ENST00000395909.4 ENST00000395914.1 ENST00000312783.6 ENST00000395915.3 ENST00000395913.3 |
AURKA |
aurora kinase A |
chr1_-_28384598 | 0.15 |
ENST00000373864.1 |
EYA3 |
eyes absent homolog 3 (Drosophila) |
chr4_-_99850243 | 0.14 |
ENST00000280892.6 ENST00000511644.1 ENST00000504432.1 ENST00000505992.1 |
EIF4E |
eukaryotic translation initiation factor 4E |
chrX_+_146993449 | 0.13 |
ENST00000218200.8 ENST00000370471.3 ENST00000370477.1 |
FMR1 |
fragile X mental retardation 1 |
chr18_-_35145689 | 0.13 |
ENST00000591287.1 ENST00000601019.1 ENST00000601392.1 |
CELF4 |
CUGBP, Elav-like family member 4 |
chr1_+_244515930 | 0.12 |
ENST00000366537.1 ENST00000308105.4 |
C1orf100 |
chromosome 1 open reading frame 100 |
chr16_+_2564254 | 0.11 |
ENST00000565223.1 |
ATP6V0C |
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c |
chr11_+_119039414 | 0.11 |
ENST00000409991.1 ENST00000292199.2 ENST00000409265.4 ENST00000409109.1 |
NLRX1 |
NLR family member X1 |
chr20_-_61002584 | 0.11 |
ENST00000252998.1 |
RBBP8NL |
RBBP8 N-terminal like |
chr1_-_234667504 | 0.11 |
ENST00000421207.1 ENST00000435574.1 |
RP5-855F14.1 |
RP5-855F14.1 |
chr14_+_23938891 | 0.10 |
ENST00000408901.3 ENST00000397154.3 ENST00000555128.1 |
NGDN |
neuroguidin, EIF4E binding protein |
chr11_-_67442079 | 0.10 |
ENST00000349015.3 |
ALDH3B2 |
aldehyde dehydrogenase 3 family, member B2 |
chr22_+_18560675 | 0.08 |
ENST00000329627.7 |
PEX26 |
peroxisomal biogenesis factor 26 |
chr19_+_19496624 | 0.08 |
ENST00000494516.2 ENST00000360315.3 ENST00000252577.5 |
GATAD2A |
GATA zinc finger domain containing 2A |
chr18_-_35145981 | 0.08 |
ENST00000420428.2 ENST00000412753.1 |
CELF4 |
CUGBP, Elav-like family member 4 |
chr17_-_60883993 | 0.07 |
ENST00000583803.1 ENST00000456609.2 |
MARCH10 |
membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase |
chr6_-_46889694 | 0.07 |
ENST00000283296.7 ENST00000362015.4 ENST00000456426.2 |
GPR116 |
G protein-coupled receptor 116 |
chr3_-_113415441 | 0.07 |
ENST00000491165.1 ENST00000316407.4 |
KIAA2018 |
KIAA2018 |
chr4_+_110736659 | 0.05 |
ENST00000394631.3 ENST00000226796.6 |
GAR1 |
GAR1 ribonucleoprotein |
chr19_+_10736183 | 0.05 |
ENST00000590857.1 ENST00000588688.1 ENST00000586078.1 |
SLC44A2 |
solute carrier family 44 (choline transporter), member 2 |
chr8_+_27950619 | 0.05 |
ENST00000542181.1 ENST00000524103.1 ENST00000537665.1 ENST00000380353.4 ENST00000520288.1 |
ELP3 |
elongator acetyltransferase complex subunit 3 |
chr19_+_12035913 | 0.04 |
ENST00000591944.1 |
ZNF763 |
Uncharacterized protein; Zinc finger protein 763 |
chr1_+_40723779 | 0.04 |
ENST00000372759.3 |
ZMPSTE24 |
zinc metallopeptidase STE24 |
chrX_-_119603138 | 0.04 |
ENST00000200639.4 ENST00000371335.4 ENST00000538785.1 ENST00000434600.2 |
LAMP2 |
lysosomal-associated membrane protein 2 |
chr3_-_3152031 | 0.03 |
ENST00000383846.1 ENST00000427088.1 ENST00000446632.2 ENST00000438560.1 |
IL5RA |
interleukin 5 receptor, alpha |
chr12_+_118814185 | 0.03 |
ENST00000543473.1 |
SUDS3 |
suppressor of defective silencing 3 homolog (S. cerevisiae) |
chr11_-_67442196 | 0.03 |
ENST00000525827.1 |
ALDH3B2 |
aldehyde dehydrogenase 3 family, member B2 |
chr5_+_125758813 | 0.01 |
ENST00000285689.3 ENST00000515200.1 |
GRAMD3 |
GRAM domain containing 3 |
chr21_+_33671264 | 0.00 |
ENST00000339944.4 |
MRAP |
melanocortin 2 receptor accessory protein |
chr4_+_156588249 | 0.00 |
ENST00000393832.3 |
GUCY1A3 |
guanylate cyclase 1, soluble, alpha 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 2.0 | GO:2001287 | negative regulation of caveolin-mediated endocytosis(GO:2001287) |
0.2 | 1.1 | GO:0060214 | endocardium formation(GO:0060214) |
0.1 | 0.3 | GO:0006425 | glutaminyl-tRNA aminoacylation(GO:0006425) |
0.1 | 0.3 | GO:0032826 | natural killer cell differentiation involved in immune response(GO:0002325) negative regulation of natural killer cell differentiation(GO:0032824) regulation of natural killer cell differentiation involved in immune response(GO:0032826) negative regulation of natural killer cell differentiation involved in immune response(GO:0032827) |
0.1 | 0.2 | GO:0046900 | tetrahydrofolylpolyglutamate metabolic process(GO:0046900) |
0.1 | 0.2 | GO:0006424 | glutamyl-tRNA aminoacylation(GO:0006424) |
0.1 | 0.4 | GO:2001181 | positive regulation of interleukin-10 secretion(GO:2001181) |
0.1 | 0.5 | GO:1902866 | regulation of retina development in camera-type eye(GO:1902866) |
0.1 | 0.2 | GO:1900195 | spindle assembly involved in female meiosis I(GO:0007057) positive regulation of oocyte maturation(GO:1900195) |
0.0 | 0.4 | GO:0042985 | negative regulation of amyloid precursor protein biosynthetic process(GO:0042985) |
0.0 | 1.1 | GO:0097296 | activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097296) |
0.0 | 0.2 | GO:0003350 | pulmonary myocardium development(GO:0003350) |
0.0 | 2.2 | GO:0051602 | response to electrical stimulus(GO:0051602) |
0.0 | 0.3 | GO:0098734 | macromolecule depalmitoylation(GO:0098734) |
0.0 | 0.2 | GO:1902714 | negative regulation of interferon-gamma secretion(GO:1902714) |
0.0 | 0.1 | GO:2000301 | regulation of intracellular transport of viral material(GO:1901252) negative regulation of synaptic vesicle exocytosis(GO:2000301) |
0.0 | 0.3 | GO:1900029 | positive regulation of ruffle assembly(GO:1900029) |
0.0 | 0.4 | GO:1900121 | negative regulation of receptor binding(GO:1900121) |
0.0 | 0.1 | GO:0000454 | snoRNA guided rRNA pseudouridine synthesis(GO:0000454) |
0.0 | 1.9 | GO:0071300 | cellular response to retinoic acid(GO:0071300) |
0.0 | 0.2 | GO:0007000 | nucleolus organization(GO:0007000) |
0.0 | 0.5 | GO:0007035 | vacuolar acidification(GO:0007035) |
0.0 | 0.3 | GO:0050908 | detection of light stimulus involved in visual perception(GO:0050908) detection of light stimulus involved in sensory perception(GO:0050962) |
0.0 | 0.0 | GO:0030327 | prenylated protein catabolic process(GO:0030327) |
0.0 | 0.0 | GO:0038043 | interleukin-5-mediated signaling pathway(GO:0038043) |
0.0 | 0.1 | GO:0039536 | negative regulation of RIG-I signaling pathway(GO:0039536) |
0.0 | 0.2 | GO:0016576 | histone dephosphorylation(GO:0016576) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.0 | GO:0044393 | microspike(GO:0044393) |
0.2 | 4.1 | GO:0005922 | connexon complex(GO:0005922) |
0.1 | 0.5 | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220) |
0.1 | 0.2 | GO:0042585 | germinal vesicle(GO:0042585) |
0.0 | 0.1 | GO:0019034 | viral replication complex(GO:0019034) |
0.0 | 3.6 | GO:0005604 | basement membrane(GO:0005604) |
0.0 | 0.3 | GO:0017101 | aminoacyl-tRNA synthetase multienzyme complex(GO:0017101) |
0.0 | 0.3 | GO:0042599 | lamellar body(GO:0042599) |
0.0 | 0.3 | GO:0016581 | NuRD complex(GO:0016581) CHD-type complex(GO:0090545) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0004819 | glutamine-tRNA ligase activity(GO:0004819) |
0.1 | 0.6 | GO:0042015 | interleukin-20 binding(GO:0042015) |
0.1 | 1.9 | GO:0005243 | gap junction channel activity(GO:0005243) |
0.1 | 0.5 | GO:0042835 | BRE binding(GO:0042835) |
0.1 | 0.3 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) |
0.1 | 0.2 | GO:0004967 | glucagon receptor activity(GO:0004967) |
0.1 | 0.2 | GO:0004818 | glutamate-tRNA ligase activity(GO:0004818) |
0.0 | 0.2 | GO:0005152 | interleukin-1 receptor antagonist activity(GO:0005152) |
0.0 | 0.3 | GO:0008474 | palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599) |
0.0 | 2.0 | GO:0015485 | cholesterol binding(GO:0015485) |
0.0 | 1.1 | GO:0043236 | laminin binding(GO:0043236) |
0.0 | 1.1 | GO:0005164 | tumor necrosis factor receptor binding(GO:0005164) |
0.0 | 0.1 | GO:0034046 | poly(G) binding(GO:0034046) |
0.0 | 0.3 | GO:0004887 | thyroid hormone receptor activity(GO:0004887) |
0.0 | 0.2 | GO:0030215 | semaphorin receptor binding(GO:0030215) |
0.0 | 0.2 | GO:0035174 | histone serine kinase activity(GO:0035174) |
0.0 | 0.5 | GO:0046961 | proton-transporting ATPase activity, rotational mechanism(GO:0046961) |
0.0 | 0.1 | GO:0000340 | RNA 7-methylguanosine cap binding(GO:0000340) |
0.0 | 0.0 | GO:0004914 | interleukin-5 receptor activity(GO:0004914) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.1 | PID TRAIL PATHWAY | TRAIL signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 4.1 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |
0.0 | 1.1 | REACTOME EXTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Extrinsic Pathway for Apoptosis |
0.0 | 1.5 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.0 | 0.5 | REACTOME MITOCHONDRIAL TRNA AMINOACYLATION | Genes involved in Mitochondrial tRNA aminoacylation |
0.0 | 0.5 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 0.4 | REACTOME PD1 SIGNALING | Genes involved in PD-1 signaling |