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Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates

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Results for LHX3

Z-value: 0.20

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Transcription factors associated with LHX3

Gene Symbol Gene ID Gene Info
ENSG00000107187.11 LHX3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LHX3hg19_v2_chr9_-_139096955_139096979,
hg19_v2_chr9_-_139094988_139095012
0.353.9e-01Click!

Activity profile of LHX3 motif

Sorted Z-values of LHX3 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of LHX3

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr11_-_63376013 0.22 ENST00000540943.1
PLA2G16
phospholipase A2, group XVI
chr19_+_50016610 0.17 ENST00000596975.1
FCGRT
Fc fragment of IgG, receptor, transporter, alpha
chr19_+_50016411 0.16 ENST00000426395.3
ENST00000600273.1
ENST00000599988.1
FCGRT
Fc fragment of IgG, receptor, transporter, alpha
chr17_+_1674982 0.16 ENST00000572048.1
ENST00000573763.1
SERPINF1
serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1
chr3_+_69812877 0.14 ENST00000457080.1
ENST00000328528.6
MITF
microphthalmia-associated transcription factor
chr2_-_145278475 0.11 ENST00000558170.2
ZEB2
zinc finger E-box binding homeobox 2
chr19_+_11457232 0.09 ENST00000587531.1
CCDC159
coiled-coil domain containing 159
chr14_+_88852059 0.09 ENST00000045347.7
SPATA7
spermatogenesis associated 7
chrX_+_9431324 0.08 ENST00000407597.2
ENST00000424279.1
ENST00000536365.1
ENST00000441088.1
ENST00000380961.1
ENST00000415293.1
TBL1X
transducin (beta)-like 1X-linked
chr5_+_67586465 0.08 ENST00000336483.5
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr1_-_48866517 0.07 ENST00000371841.1
SPATA6
spermatogenesis associated 6
chr5_+_140529630 0.07 ENST00000543635.1
PCDHB6
protocadherin beta 6
chrX_-_106243451 0.07 ENST00000355610.4
ENST00000535534.1
MORC4
MORC family CW-type zinc finger 4
chr10_-_27529486 0.06 ENST00000375888.1
ACBD5
acyl-CoA binding domain containing 5
chr2_-_231860596 0.06 ENST00000441063.1
ENST00000434094.1
ENST00000418330.1
ENST00000457803.1
ENST00000414876.1
ENST00000446741.1
ENST00000426904.1
AC105344.2
SPATA3 antisense RNA 1 (head to head)
chr12_+_8309630 0.05 ENST00000396570.3
ZNF705A
zinc finger protein 705A
chr6_+_114178512 0.05 ENST00000368635.4
MARCKS
myristoylated alanine-rich protein kinase C substrate
chr17_-_8263538 0.05 ENST00000535173.1
AC135178.1
HCG1985372; Uncharacterized protein; cDNA FLJ37541 fis, clone BRCAN2026340
chr19_-_49149553 0.05 ENST00000084798.4
CA11
carbonic anhydrase XI
chr15_-_20193370 0.05 ENST00000558565.2
IGHV3OR15-7
immunoglobulin heavy variable 3/OR15-7 (pseudogene)
chr19_+_11457175 0.05 ENST00000458408.1
ENST00000586451.1
ENST00000588592.1
CCDC159
coiled-coil domain containing 159
chr4_+_186990298 0.05 ENST00000296795.3
ENST00000513189.1
TLR3
toll-like receptor 3
chr8_-_57123815 0.04 ENST00000316981.3
ENST00000423799.2
ENST00000429357.2
PLAG1
pleiomorphic adenoma gene 1
chr6_+_72926145 0.04 ENST00000425662.2
ENST00000453976.2
RIMS1
regulating synaptic membrane exocytosis 1
chr3_-_141747950 0.04 ENST00000497579.1
TFDP2
transcription factor Dp-2 (E2F dimerization partner 2)
chr1_-_182641037 0.04 ENST00000483095.2
RGS8
regulator of G-protein signaling 8
chr1_-_182640988 0.04 ENST00000367556.1
RGS8
regulator of G-protein signaling 8
chrX_+_108779004 0.04 ENST00000218004.1
NXT2
nuclear transport factor 2-like export factor 2
chr13_+_24144796 0.04 ENST00000403372.2
TNFRSF19
tumor necrosis factor receptor superfamily, member 19
chr5_-_88119580 0.04 ENST00000539796.1
MEF2C
myocyte enhancer factor 2C
chr9_+_125133315 0.04 ENST00000223423.4
ENST00000362012.2
PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr17_-_39623681 0.04 ENST00000225899.3
KRT32
keratin 32
chr17_-_10372875 0.04 ENST00000255381.2
MYH4
myosin, heavy chain 4, skeletal muscle
chr7_-_140482926 0.04 ENST00000496384.2
BRAF
v-raf murine sarcoma viral oncogene homolog B
chr20_+_5987890 0.03 ENST00000378868.4
CRLS1
cardiolipin synthase 1
chr8_+_105352050 0.03 ENST00000297581.2
DCSTAMP
dendrocyte expressed seven transmembrane protein
chr2_-_188312971 0.03 ENST00000410068.1
ENST00000447403.1
ENST00000410102.1
CALCRL
calcitonin receptor-like
chr12_+_49740700 0.03 ENST00000549441.2
ENST00000395069.3
DNAJC22
DnaJ (Hsp40) homolog, subfamily C, member 22
chr9_-_21482312 0.03 ENST00000448696.3
IFNE
interferon, epsilon
chr7_-_22862406 0.03 ENST00000372879.4
TOMM7
translocase of outer mitochondrial membrane 7 homolog (yeast)
chr3_+_148415571 0.03 ENST00000497524.1
ENST00000349243.3
ENST00000542281.1
ENST00000418473.2
ENST00000404754.2
AGTR1
angiotensin II receptor, type 1
chr4_+_169552748 0.03 ENST00000504519.1
ENST00000512127.1
PALLD
palladin, cytoskeletal associated protein
chr11_-_327537 0.03 ENST00000602735.1
IFITM3
interferon induced transmembrane protein 3
chr11_+_27015628 0.03 ENST00000318627.2
FIBIN
fin bud initiation factor homolog (zebrafish)
chr5_+_81601166 0.03 ENST00000439350.1
ATP6AP1L
ATPase, H+ transporting, lysosomal accessory protein 1-like
chr7_+_138915102 0.03 ENST00000486663.1
UBN2
ubinuclein 2
chr2_+_26624775 0.03 ENST00000288710.2
DRC1
dynein regulatory complex subunit 1 homolog (Chlamydomonas)
chr3_+_138340067 0.03 ENST00000479848.1
FAIM
Fas apoptotic inhibitory molecule
chr9_-_215744 0.03 ENST00000382387.2
C9orf66
chromosome 9 open reading frame 66
chr3_+_141106643 0.03 ENST00000514251.1
ZBTB38
zinc finger and BTB domain containing 38
chr12_+_59989918 0.02 ENST00000547379.1
ENST00000549465.1
SLC16A7
solute carrier family 16 (monocarboxylate transporter), member 7
chr18_+_616711 0.02 ENST00000579494.1
CLUL1
clusterin-like 1 (retinal)
chr1_+_168250194 0.02 ENST00000367821.3
TBX19
T-box 19
chr12_-_42631529 0.02 ENST00000548917.1
YAF2
YY1 associated factor 2
chr13_+_53602894 0.02 ENST00000219022.2
OLFM4
olfactomedin 4
chr5_+_147691979 0.02 ENST00000274565.4
SPINK7
serine peptidase inhibitor, Kazal type 7 (putative)
chr12_-_53994805 0.02 ENST00000328463.7
ATF7
activating transcription factor 7
chr4_+_113568207 0.02 ENST00000511529.1
LARP7
La ribonucleoprotein domain family, member 7
chr7_+_30185406 0.02 ENST00000324489.5
C7orf41
maturin, neural progenitor differentiation regulator homolog (Xenopus)
chr9_-_116065551 0.02 ENST00000297894.5
RNF183
ring finger protein 183
chr3_+_138340049 0.02 ENST00000464668.1
FAIM
Fas apoptotic inhibitory molecule
chr3_+_2933893 0.02 ENST00000397459.2
CNTN4
contactin 4
chr3_+_151591422 0.02 ENST00000362032.5
SUCNR1
succinate receptor 1
chr5_-_43557791 0.02 ENST00000338972.4
ENST00000511321.1
ENST00000515338.1
PAIP1
poly(A) binding protein interacting protein 1
chr1_+_115572415 0.02 ENST00000256592.1
TSHB
thyroid stimulating hormone, beta
chr8_-_104153703 0.02 ENST00000521246.1
C8orf56
chromosome 8 open reading frame 56
chr22_+_17956618 0.02 ENST00000262608.8
CECR2
cat eye syndrome chromosome region, candidate 2
chr8_-_25281747 0.02 ENST00000421054.2
GNRH1
gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
chr1_-_57285038 0.02 ENST00000343433.6
C1orf168
chromosome 1 open reading frame 168
chr4_+_3344141 0.02 ENST00000306648.7
RGS12
regulator of G-protein signaling 12
chr12_+_64798095 0.02 ENST00000332707.5
XPOT
exportin, tRNA
chr18_+_72201664 0.02 ENST00000358821.3
CNDP1
carnosine dipeptidase 1 (metallopeptidase M20 family)
chr3_-_141719195 0.02 ENST00000397991.4
TFDP2
transcription factor Dp-2 (E2F dimerization partner 2)
chr16_-_28937027 0.02 ENST00000358201.4
RABEP2
rabaptin, RAB GTPase binding effector protein 2
chr2_-_99279928 0.02 ENST00000414521.2
MGAT4A
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
chr8_-_104153559 0.02 ENST00000436771.1
C8orf56
chromosome 8 open reading frame 56
chr6_+_26104104 0.02 ENST00000377803.2
HIST1H4C
histone cluster 1, H4c
chr18_-_21891460 0.02 ENST00000357041.4
OSBPL1A
oxysterol binding protein-like 1A
chr10_-_115904361 0.02 ENST00000428953.1
ENST00000543782.1
C10orf118
chromosome 10 open reading frame 118
chr15_-_75748115 0.02 ENST00000360439.4
SIN3A
SIN3 transcription regulator family member A
chr14_-_45252031 0.02 ENST00000556405.1
RP11-398E10.1
RP11-398E10.1
chr18_+_616672 0.02 ENST00000338387.7
CLUL1
clusterin-like 1 (retinal)
chr1_-_231005310 0.01 ENST00000470540.1
C1orf198
chromosome 1 open reading frame 198
chr11_-_67980744 0.01 ENST00000401547.2
ENST00000453170.1
ENST00000304363.4
SUV420H1
suppressor of variegation 4-20 homolog 1 (Drosophila)
chr5_+_59783540 0.01 ENST00000515734.2
PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr13_-_70682590 0.01 ENST00000377844.4
KLHL1
kelch-like family member 1
chr19_-_51920952 0.01 ENST00000356298.5
ENST00000339313.5
ENST00000529627.1
ENST00000439889.2
ENST00000353836.5
ENST00000432469.2
SIGLEC10
sialic acid binding Ig-like lectin 10
chr15_-_99057551 0.01 ENST00000558256.1
FAM169B
family with sequence similarity 169, member B
chr1_+_244214577 0.01 ENST00000358704.4
ZBTB18
zinc finger and BTB domain containing 18
chr15_-_81195510 0.01 ENST00000561295.1
RP11-351M8.1
Uncharacterized protein
chrX_-_13835147 0.01 ENST00000493677.1
ENST00000355135.2
GPM6B
glycoprotein M6B
chr20_+_11008408 0.01 ENST00000378252.1
C20orf187
chromosome 20 open reading frame 187
chr18_-_21852143 0.01 ENST00000399443.3
OSBPL1A
oxysterol binding protein-like 1A
chr14_+_55493920 0.01 ENST00000395472.2
ENST00000555846.1
SOCS4
suppressor of cytokine signaling 4
chr19_-_6279932 0.01 ENST00000252674.7
MLLT1
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
chr9_+_35042205 0.01 ENST00000312292.5
ENST00000378745.3
C9orf131
chromosome 9 open reading frame 131
chr2_+_54785485 0.01 ENST00000333896.5
SPTBN1
spectrin, beta, non-erythrocytic 1
chr8_-_110986918 0.01 ENST00000297404.1
KCNV1
potassium channel, subfamily V, member 1
chr8_+_11961898 0.01 ENST00000400085.3
ZNF705D
zinc finger protein 705D
chr12_-_10282681 0.01 ENST00000533022.1
CLEC7A
C-type lectin domain family 7, member A
chr18_+_72201829 0.01 ENST00000582365.1
CNDP1
carnosine dipeptidase 1 (metallopeptidase M20 family)
chrX_+_84258832 0.01 ENST00000373173.2
APOOL
apolipoprotein O-like
chr16_+_28565230 0.01 ENST00000317058.3
CCDC101
coiled-coil domain containing 101
chr1_-_45988542 0.01 ENST00000424390.1
PRDX1
peroxiredoxin 1
chr3_-_191000172 0.01 ENST00000427544.2
UTS2B
urotensin 2B
chr3_+_157827841 0.01 ENST00000295930.3
ENST00000471994.1
ENST00000464171.1
ENST00000312179.6
ENST00000475278.2
RSRC1
arginine/serine-rich coiled-coil 1
chr14_+_55494323 0.01 ENST00000339298.2
SOCS4
suppressor of cytokine signaling 4
chr8_-_30670384 0.01 ENST00000221138.4
ENST00000518243.1
PPP2CB
protein phosphatase 2, catalytic subunit, beta isozyme
chr12_-_7656357 0.01 ENST00000396620.3
ENST00000432237.2
ENST00000359156.4
CD163
CD163 molecule
chr15_+_64680003 0.01 ENST00000261884.3
TRIP4
thyroid hormone receptor interactor 4
chr14_-_107049312 0.01 ENST00000390627.2
IGHV3-53
immunoglobulin heavy variable 3-53
chr4_+_158142750 0.01 ENST00000505888.1
ENST00000449365.1
GRIA2
glutamate receptor, ionotropic, AMPA 2
chr4_+_158493642 0.00 ENST00000507108.1
ENST00000455598.1
ENST00000509450.1
RP11-364P22.1
RP11-364P22.1
chr5_+_140557371 0.00 ENST00000239444.2
PCDHB8
protocadherin beta 8
chr9_-_128246769 0.00 ENST00000444226.1
MAPKAP1
mitogen-activated protein kinase associated protein 1
chr6_-_49712147 0.00 ENST00000433368.2
ENST00000354620.4
CRISP3
cysteine-rich secretory protein 3
chr20_-_29978286 0.00 ENST00000376315.2
DEFB119
defensin, beta 119
chr3_-_167191814 0.00 ENST00000466903.1
ENST00000264677.4
SERPINI2
serpin peptidase inhibitor, clade I (pancpin), member 2
chr3_-_48130707 0.00 ENST00000360240.6
ENST00000383737.4
MAP4
microtubule-associated protein 4
chr17_-_60142609 0.00 ENST00000397786.2
MED13
mediator complex subunit 13
chr6_-_49712123 0.00 ENST00000263045.4
CRISP3
cysteine-rich secretory protein 3
chr14_-_101295407 0.00 ENST00000596284.1
AL117190.2
AL117190.2
chr14_+_22465771 0.00 ENST00000390445.2
TRAV17
T cell receptor alpha variable 17
chr12_-_10282742 0.00 ENST00000298523.5
ENST00000396484.2
ENST00000310002.4
CLEC7A
C-type lectin domain family 7, member A
chr9_-_100000957 0.00 ENST00000366109.2
ENST00000607322.1
RP11-498P14.5
RP11-498P14.5
chr12_+_40787194 0.00 ENST00000425730.2
ENST00000454784.4
MUC19
mucin 19, oligomeric
chr8_-_49834299 0.00 ENST00000396822.1
SNAI2
snail family zinc finger 2
chr5_+_59783941 0.00 ENST00000506884.1
ENST00000504876.2
PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr4_+_158141843 0.00 ENST00000509417.1
ENST00000296526.7
GRIA2
glutamate receptor, ionotropic, AMPA 2

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0002414 immunoglobulin transcytosis in epithelial cells(GO:0002414)
0.0 0.2 GO:0071279 cellular response to cobalt ion(GO:0071279)
0.0 0.2 GO:0046485 ether lipid metabolic process(GO:0046485)
0.0 0.1 GO:1902748 positive regulation of lens fiber cell differentiation(GO:1902748)
0.0 0.0 GO:0034344 microglial cell activation involved in immune response(GO:0002282) type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344) positive regulation of interferon-alpha biosynthetic process(GO:0045356)
0.0 0.0 GO:0034241 macrophage fusion(GO:0034238) regulation of macrophage fusion(GO:0034239) positive regulation of macrophage fusion(GO:0034241)
0.0 0.0 GO:0003172 primary heart field specification(GO:0003138) sinoatrial valve development(GO:0003172) sinoatrial valve morphogenesis(GO:0003185)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990578 perinuclear endoplasmic reticulum membrane(GO:1990578)
0.0 0.1 GO:0042585 germinal vesicle(GO:0042585)
0.0 0.1 GO:0097224 sperm connecting piece(GO:0097224)
0.0 0.2 GO:0043203 axon hillock(GO:0043203)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0019770 IgG receptor activity(GO:0019770)
0.0 0.2 GO:0052740 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.0 GO:0043337 cardiolipin synthase activity(GO:0008808) phosphatidyltransferase activity(GO:0030572) CDP-diacylglycerol-phosphatidylglycerol phosphatidyltransferase activity(GO:0043337)
0.0 0.0 GO:0001596 angiotensin type I receptor activity(GO:0001596)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME ACYL CHAIN REMODELLING OF PS Genes involved in Acyl chain remodelling of PS