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Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates

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Results for PRDM4

Z-value: 0.32

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Transcription factors associated with PRDM4

Gene Symbol Gene ID Gene Info
ENSG00000110851.7 PRDM4

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
PRDM4hg19_v2_chr12_-_108154925_108154945-0.821.2e-02Click!

Activity profile of PRDM4 motif

Sorted Z-values of PRDM4 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of PRDM4

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr20_+_62697564 0.28 ENST00000458442.1
TCEA2
transcription elongation factor A (SII), 2
chr4_+_667686 0.21 ENST00000505477.1
MYL5
myosin, light chain 5, regulatory
chr4_+_667307 0.20 ENST00000506838.1
MYL5
myosin, light chain 5, regulatory
chr22_+_38864041 0.18 ENST00000216014.4
ENST00000409006.3
KDELR3
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
chr2_-_179343268 0.18 ENST00000424785.2
FKBP7
FK506 binding protein 7
chr14_+_105953204 0.17 ENST00000409393.2
CRIP1
cysteine-rich protein 1 (intestinal)
chr16_+_29823427 0.17 ENST00000358758.7
ENST00000567659.1
ENST00000572820.1
PRRT2
proline-rich transmembrane protein 2
chr16_+_29823552 0.17 ENST00000300797.6
PRRT2
proline-rich transmembrane protein 2
chr14_+_105953246 0.17 ENST00000392531.3
CRIP1
cysteine-rich protein 1 (intestinal)
chr5_-_61031495 0.16 ENST00000506550.1
ENST00000512882.2
CTD-2170G1.2
CTD-2170G1.2
chr2_-_179343226 0.16 ENST00000434643.2
FKBP7
FK506 binding protein 7
chrX_-_73072534 0.15 ENST00000429829.1
XIST
X inactive specific transcript (non-protein coding)
chr1_+_43232913 0.15 ENST00000372525.5
ENST00000536543.1
C1orf50
chromosome 1 open reading frame 50
chr1_-_43232649 0.13 ENST00000372526.2
ENST00000236040.4
ENST00000296388.5
ENST00000397054.3
LEPRE1
leucine proline-enriched proteoglycan (leprecan) 1
chr2_+_219264466 0.12 ENST00000273062.2
CTDSP1
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
chr7_-_38398721 0.12 ENST00000390346.2
TRGV3
T cell receptor gamma variable 3
chr5_-_180688105 0.12 ENST00000327767.4
TRIM52
tripartite motif containing 52
chr19_+_41117770 0.12 ENST00000601032.1
LTBP4
latent transforming growth factor beta binding protein 4
chr12_+_15475331 0.12 ENST00000281171.4
PTPRO
protein tyrosine phosphatase, receptor type, O
chr19_-_49371711 0.10 ENST00000355496.5
ENST00000263265.6
PLEKHA4
pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
chr3_+_16926441 0.10 ENST00000418129.2
ENST00000396755.2
PLCL2
phospholipase C-like 2
chr19_-_35264089 0.09 ENST00000588760.1
ENST00000329285.8
ENST00000587354.2
ZNF599
zinc finger protein 599
chr9_-_16727978 0.09 ENST00000418777.1
ENST00000468187.2
BNC2
basonuclin 2
chr12_+_15475462 0.09 ENST00000543886.1
ENST00000348962.2
PTPRO
protein tyrosine phosphatase, receptor type, O
chr7_+_143079000 0.08 ENST00000392910.2
ZYX
zyxin
chr14_+_24025194 0.08 ENST00000404535.3
ENST00000288014.6
THTPA
thiamine triphosphatase
chr11_+_47279504 0.07 ENST00000441012.2
ENST00000437276.1
ENST00000436029.1
ENST00000467728.1
ENST00000405853.3
NR1H3
nuclear receptor subfamily 1, group H, member 3
chr6_-_8064567 0.07 ENST00000543936.1
ENST00000397457.2
BLOC1S5
biogenesis of lysosomal organelles complex-1, subunit 5, muted
chrX_+_15808569 0.07 ENST00000380308.3
ENST00000307771.7
ZRSR2
zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2
chr1_+_27114418 0.07 ENST00000078527.4
PIGV
phosphatidylinositol glycan anchor biosynthesis, class V
chr9_-_70488865 0.07 ENST00000377392.5
CBWD5
COBW domain containing 5
chr7_+_143078652 0.06 ENST00000354434.4
ENST00000449423.2
ZYX
zyxin
chr10_-_105212141 0.06 ENST00000369788.3
CALHM2
calcium homeostasis modulator 2
chr20_+_30555805 0.06 ENST00000562532.2
XKR7
XK, Kell blood group complex subunit-related family, member 7
chr10_+_88728189 0.06 ENST00000416348.1
ADIRF
adipogenesis regulatory factor
chr1_+_27114589 0.06 ENST00000431541.1
ENST00000449950.2
ENST00000374145.1
PIGV
phosphatidylinositol glycan anchor biosynthesis, class V
chr5_-_78281603 0.05 ENST00000264914.4
ARSB
arylsulfatase B
chr7_+_90893783 0.05 ENST00000287934.2
FZD1
frizzled family receptor 1
chr6_-_24721054 0.04 ENST00000378119.4
C6orf62
chromosome 6 open reading frame 62
chr8_+_94712732 0.04 ENST00000518322.1
FAM92A1
family with sequence similarity 92, member A1
chr12_-_58240470 0.04 ENST00000548823.1
ENST00000398073.2
CTDSP2
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
chr20_-_61569227 0.04 ENST00000266070.4
ENST00000395335.2
ENST00000266071.5
DIDO1
death inducer-obliterator 1
chr17_+_42634844 0.03 ENST00000315323.3
FZD2
frizzled family receptor 2
chr11_+_58910295 0.03 ENST00000420244.1
FAM111A
family with sequence similarity 111, member A
chr15_+_74287035 0.03 ENST00000395132.2
ENST00000268059.6
ENST00000354026.6
ENST00000268058.3
ENST00000565898.1
ENST00000569477.1
ENST00000569965.1
ENST00000567543.1
ENST00000436891.3
ENST00000435786.2
ENST00000564428.1
ENST00000359928.4
PML
promyelocytic leukemia
chr8_+_94712752 0.02 ENST00000522324.1
ENST00000522803.1
ENST00000423990.2
FAM92A1
family with sequence similarity 92, member A1
chr3_+_148709310 0.02 ENST00000484197.1
ENST00000492285.2
ENST00000461191.1
GYG1
glycogenin 1
chr3_+_148709128 0.02 ENST00000345003.4
ENST00000296048.6
ENST00000483267.1
GYG1
glycogenin 1
chr9_+_17135016 0.02 ENST00000425824.1
ENST00000262360.5
ENST00000380641.4
CNTLN
centlein, centrosomal protein
chr19_-_53636125 0.02 ENST00000601493.1
ENST00000599261.1
ENST00000597503.1
ENST00000500065.4
ENST00000243643.4
ENST00000594011.1
ENST00000455735.2
ENST00000595193.1
ENST00000448501.1
ENST00000421033.1
ENST00000440291.1
ENST00000595813.1
ENST00000600574.1
ENST00000596051.1
ENST00000601110.1
ZNF415
zinc finger protein 415
chr16_+_15068955 0.02 ENST00000396410.4
ENST00000569715.1
ENST00000450288.2
PDXDC1
pyridoxal-dependent decarboxylase domain containing 1
chr5_+_102455968 0.01 ENST00000358359.3
PPIP5K2
diphosphoinositol pentakisphosphate kinase 2
chr2_-_8723918 0.01 ENST00000454224.1
AC011747.4
AC011747.4
chr5_-_102455801 0.01 ENST00000508629.1
ENST00000399004.2
GIN1
gypsy retrotransposon integrase 1
chr19_+_42724423 0.01 ENST00000301215.3
ENST00000597945.1
ZNF526
zinc finger protein 526
chr5_+_102455853 0.00 ENST00000515845.1
ENST00000321521.9
ENST00000507921.1
PPIP5K2
diphosphoinositol pentakisphosphate kinase 2
chr10_-_105677886 0.00 ENST00000224950.3
OBFC1
oligonucleotide/oligosaccharide-binding fold containing 1
chr11_+_8040739 0.00 ENST00000534099.1
TUB
tubby bipartite transcription factor

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0036060 filtration diaphragm assembly(GO:0036058) slit diaphragm assembly(GO:0036060)
0.1 0.3 GO:0060741 prostate gland stromal morphogenesis(GO:0060741)
0.0 0.1 GO:0002337 B-1a B cell differentiation(GO:0002337)
0.0 0.1 GO:0090341 negative regulation of secretion of lysosomal enzymes(GO:0090341)
0.0 0.1 GO:0042357 thiamine diphosphate metabolic process(GO:0042357)
0.0 0.3 GO:0050884 neuromuscular process controlling posture(GO:0050884)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.0 GO:0035425 autocrine signaling(GO:0035425)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0031501 mannosyltransferase complex(GO:0031501)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.2 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.3 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0032810 sterol response element binding(GO:0032810)
0.0 0.0 GO:0008466 glycogenin glucosyltransferase activity(GO:0008466)
0.0 0.3 GO:0005527 macrolide binding(GO:0005527) FK506 binding(GO:0005528)