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Epithelial-Mesenchymal Transition, human (Scheel, 2011): : averaged replicates

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Results for SHOX

Z-value: 0.88

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Transcription factors associated with SHOX

Gene Symbol Gene ID Gene Info
SHOX
ENSG00000185960.8 SHOX
SHOX
ENSGR0000185960.8 SHOX

Activity profile of SHOX motif

Sorted Z-values of SHOX motif

Network of associatons between targets according to the STRING database.

First level regulatory network of SHOX

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr3_-_151034734 2.35 ENST00000260843.4
 GPR87
 G protein-coupled receptor 87
chr19_-_51522955 2.10 ENST00000358789.3
 KLK10
 kallikrein-related peptidase 10
chr1_-_242612779 1.65 ENST00000427495.1
 PLD5
 phospholipase D family, member 5
chr5_-_1882858 1.08 ENST00000511126.1
ENST00000231357.2
 IRX4
 iroquois homeobox 4
chr12_-_28122980 1.06 ENST00000395868.3
ENST00000534890.1
 PTHLH
 parathyroid hormone-like hormone
chr12_-_28123206 1.06 ENST00000542963.1
ENST00000535992.1
 PTHLH
 parathyroid hormone-like hormone
chr19_-_51523412 1.01 ENST00000391805.1
ENST00000599077.1
 KLK10
 kallikrein-related peptidase 10
chr15_+_101420028 0.97 ENST00000557963.1
ENST00000346623.6
 ALDH1A3
 aldehyde dehydrogenase 1 family, member A3
chr19_-_51523275 0.96 ENST00000309958.3
 KLK10
 kallikrein-related peptidase 10
chr12_+_4385230 0.80 ENST00000536537.1
 CCND2
 cyclin D2
chr13_-_86373536 0.76 ENST00000400286.2
 SLITRK6
 SLIT and NTRK-like family, member 6
chr1_+_62439037 0.73 ENST00000545929.1
 INADL
 InaD-like (Drosophila)
chr18_+_34124507 0.71 ENST00000591635.1
 FHOD3
 formin homology 2 domain containing 3
chr4_+_69313145 0.68 ENST00000305363.4
 TMPRSS11E
 transmembrane protease, serine 11E
chr2_+_68961934 0.66 ENST00000409202.3
 ARHGAP25
 Rho GTPase activating protein 25
chr2_+_68961905 0.65 ENST00000295381.3
 ARHGAP25
 Rho GTPase activating protein 25
chr6_-_136788001 0.65 ENST00000544465.1
 MAP7
 microtubule-associated protein 7
chr19_-_36001113 0.63 ENST00000434389.1
 DMKN
 dermokine
chr5_+_66300446 0.61 ENST00000261569.7
 MAST4
 microtubule associated serine/threonine kinase family member 4
chr20_+_58630972 0.58 ENST00000313426.1
 C20orf197
 chromosome 20 open reading frame 197
chr12_-_28125638 0.56 ENST00000545234.1
 PTHLH
 parathyroid hormone-like hormone
chr8_-_139926236 0.56 ENST00000303045.6
ENST00000435777.1
 COL22A1
 collagen, type XXII, alpha 1
chr11_-_124190184 0.56 ENST00000357438.2
 OR8D2
 olfactory receptor, family 8, subfamily D, member 2
chr11_-_117747434 0.55 ENST00000529335.2
ENST00000530956.1
ENST00000260282.4
 FXYD6
 FXYD domain containing ion transport regulator 6
chr3_+_111718036 0.55 ENST00000455401.2
 TAGLN3
 transgelin 3
chr1_+_160370344 0.54 ENST00000368061.2
 VANGL2
 VANGL planar cell polarity protein 2
chr4_-_74486217 0.54 ENST00000335049.5
ENST00000307439.5
 RASSF6
 Ras association (RalGDS/AF-6) domain family member 6
chr11_-_117747607 0.54 ENST00000540359.1
ENST00000539526.1
 FXYD6
 FXYD domain containing ion transport regulator 6
chr11_-_117748138 0.53 ENST00000527717.1
 FXYD6
 FXYD domain containing ion transport regulator 6
chr12_+_41831485 0.53 ENST00000539469.2
ENST00000298919.7
 PDZRN4
 PDZ domain containing ring finger 4
chr4_-_25865159 0.53 ENST00000502949.1
ENST00000264868.5
ENST00000513691.1
ENST00000514872.1
 SEL1L3
 sel-1 suppressor of lin-12-like 3 (C. elegans)
chr20_-_50418947 0.52 ENST00000371539.3
 SALL4
 spalt-like transcription factor 4
chr3_+_111717600 0.52 ENST00000273368.4
 TAGLN3
 transgelin 3
chr21_-_42219065 0.51 ENST00000400454.1
 DSCAM
 Down syndrome cell adhesion molecule
chr12_-_52828147 0.50 ENST00000252245.5
 KRT75
 keratin 75
chr8_-_17533838 0.49 ENST00000400046.1
 MTUS1
 microtubule associated tumor suppressor 1
chr3_+_111718173 0.49 ENST00000494932.1
 TAGLN3
 transgelin 3
chr7_-_22233442 0.47 ENST00000401957.2
 RAPGEF5
 Rap guanine nucleotide exchange factor (GEF) 5
chr3_+_111717511 0.47 ENST00000478951.1
ENST00000393917.2
 TAGLN3
 transgelin 3
chrX_+_105937068 0.46 ENST00000324342.3
 RNF128
 ring finger protein 128, E3 ubiquitin protein ligase
chr6_-_9933500 0.46 ENST00000492169.1
 OFCC1
 orofacial cleft 1 candidate 1
chr17_+_39394250 0.46 ENST00000254072.6
 KRTAP9-8
 keratin associated protein 9-8
chr13_-_46716969 0.46 ENST00000435666.2
 LCP1
 lymphocyte cytosolic protein 1 (L-plastin)
chr13_+_78109804 0.42 ENST00000535157.1
 SCEL
 sciellin
chr4_+_77356248 0.42 ENST00000296043.6
 SHROOM3
 shroom family member 3
chr17_+_39382900 0.42 ENST00000377721.3
ENST00000455970.2
 KRTAP9-2
 keratin associated protein 9-2
chr13_+_78109884 0.42 ENST00000377246.3
ENST00000349847.3
 SCEL
 sciellin
chr1_+_153746683 0.41 ENST00000271857.2
 SLC27A3
 solute carrier family 27 (fatty acid transporter), member 3
chr10_+_24755416 0.41 ENST00000396446.1
ENST00000396445.1
ENST00000376451.2
 KIAA1217
 KIAA1217
chr7_-_22234381 0.40 ENST00000458533.1
 RAPGEF5
 Rap guanine nucleotide exchange factor (GEF) 5
chr1_+_153747746 0.40 ENST00000368661.3
 SLC27A3
 solute carrier family 27 (fatty acid transporter), member 3
chr3_-_191000172 0.39 ENST00000427544.2
 UTS2B
 urotensin 2B
chr20_-_50418972 0.39 ENST00000395997.3
 SALL4
 spalt-like transcription factor 4
chr8_+_105235572 0.38 ENST00000523362.1
 RIMS2
 regulating synaptic membrane exocytosis 2
chr12_-_89746173 0.37 ENST00000308385.6
 DUSP6
 dual specificity phosphatase 6
chr17_-_19015945 0.36 ENST00000573866.2
 SNORD3D
 small nucleolar RNA, C/D box 3D
chr10_+_24497704 0.36 ENST00000376456.4
ENST00000458595.1
 KIAA1217
 KIAA1217
chr10_-_50970322 0.35 ENST00000374103.4
 OGDHL
 oxoglutarate dehydrogenase-like
chr19_+_34287751 0.33 ENST00000590771.1
ENST00000589786.1
ENST00000284006.6
ENST00000588881.1
 KCTD15
 potassium channel tetramerization domain containing 15
chr14_+_22966642 0.33 ENST00000390496.1
 TRAJ41
 T cell receptor alpha joining 41
chr14_-_38064198 0.32 ENST00000250448.2
 FOXA1
 forkhead box A1
chr11_-_118023490 0.32 ENST00000324727.4
 SCN4B
 sodium channel, voltage-gated, type IV, beta subunit
chr8_+_98900132 0.32 ENST00000520016.1
 MATN2
 matrilin 2
chr12_-_31479045 0.31 ENST00000539409.1
ENST00000395766.1
 FAM60A
 family with sequence similarity 60, member A
chr14_-_54423529 0.31 ENST00000245451.4
ENST00000559087.1
 BMP4
 bone morphogenetic protein 4
chr1_+_107683436 0.31 ENST00000370068.1
 NTNG1
 netrin G1
chr3_-_27764190 0.31 ENST00000537516.1
 EOMES
 eomesodermin
chr10_-_50970382 0.30 ENST00000419399.1
ENST00000432695.1
 OGDHL
 oxoglutarate dehydrogenase-like
chr3_+_130569429 0.30 ENST00000505330.1
ENST00000504381.1
ENST00000507488.2
ENST00000393221.4
 ATP2C1
 ATPase, Ca++ transporting, type 2C, member 1
chr4_-_123542224 0.30 ENST00000264497.3
 IL21
 interleukin 21
chr17_+_19091325 0.30 ENST00000584923.1
 SNORD3A
 small nucleolar RNA, C/D box 3A
chr2_+_68962014 0.30 ENST00000467265.1
 ARHGAP25
 Rho GTPase activating protein 25
chr6_+_12007897 0.29 ENST00000437559.1
 RP11-456H18.2
 RP11-456H18.2
chr17_-_27418537 0.29 ENST00000408971.2
 TIAF1
 TGFB1-induced anti-apoptotic factor 1
chr8_+_101170563 0.29 ENST00000520508.1
ENST00000388798.2
 SPAG1
 sperm associated antigen 1
chr17_-_64225508 0.29 ENST00000205948.6
 APOH
 apolipoprotein H (beta-2-glycoprotein I)
chr4_-_74486347 0.28 ENST00000342081.3
 RASSF6
 Ras association (RalGDS/AF-6) domain family member 6
chr18_-_53253323 0.28 ENST00000540999.1
ENST00000563888.2
 TCF4
 transcription factor 4
chr1_+_180601139 0.28 ENST00000367590.4
ENST00000367589.3
 XPR1
 xenotropic and polytropic retrovirus receptor 1
chr12_+_19358228 0.27 ENST00000424268.1
ENST00000543806.1
 PLEKHA5
 pleckstrin homology domain containing, family A member 5
chr20_-_50419055 0.27 ENST00000217086.4
 SALL4
 spalt-like transcription factor 4
chr9_+_12693336 0.27 ENST00000381137.2
ENST00000388918.5
 TYRP1
 tyrosinase-related protein 1
chr12_+_122688090 0.27 ENST00000324189.4
ENST00000546192.1
 B3GNT4
 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
chr4_-_74486109 0.27 ENST00000395777.2
 RASSF6
 Ras association (RalGDS/AF-6) domain family member 6
chr7_-_25268104 0.26 ENST00000222674.2
 NPVF
 neuropeptide VF precursor
chr4_-_143227088 0.26 ENST00000511838.1
 INPP4B
 inositol polyphosphate-4-phosphatase, type II, 105kDa
chr18_-_53253112 0.26 ENST00000568673.1
ENST00000562847.1
ENST00000568147.1
 TCF4
 transcription factor 4
chr4_-_143226979 0.25 ENST00000514525.1
 INPP4B
 inositol polyphosphate-4-phosphatase, type II, 105kDa
chr9_-_5304432 0.25 ENST00000416837.1
ENST00000308420.3
 RLN2
 relaxin 2
chr12_+_10163231 0.25 ENST00000396502.1
ENST00000338896.5
 CLEC12B
 C-type lectin domain family 12, member B
chr3_-_141747950 0.25 ENST00000497579.1
 TFDP2
 transcription factor Dp-2 (E2F dimerization partner 2)
chr5_+_126984710 0.24 ENST00000379445.3
 CTXN3
 cortexin 3
chr21_+_17442799 0.24 ENST00000602580.1
ENST00000458468.1
ENST00000602935.1
 LINC00478
 long intergenic non-protein coding RNA 478
chr1_-_92952433 0.24 ENST00000294702.5
 GFI1
 growth factor independent 1 transcription repressor
chrX_+_134654540 0.24 ENST00000370752.4
 DDX26B
 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
chr1_+_107682629 0.24 ENST00000370074.4
ENST00000370073.2
ENST00000370071.2
ENST00000542803.1
ENST00000370061.3
ENST00000370072.3
ENST00000370070.2
 NTNG1
 netrin G1
chr17_-_38956205 0.24 ENST00000306658.7
 KRT28
 keratin 28
chr2_+_162272605 0.23 ENST00000389554.3
 TBR1
 T-box, brain, 1
chr7_-_71868354 0.23 ENST00000412588.1
 CALN1
 calneuron 1
chr3_-_27763803 0.23 ENST00000449599.1
 EOMES
 eomesodermin
chr4_+_78432907 0.23 ENST00000286758.4
 CXCL13
 chemokine (C-X-C motif) ligand 13
chr14_+_22977587 0.23 ENST00000390504.1
 TRAJ33
 T cell receptor alpha joining 33
chr12_+_26348429 0.22 ENST00000242729.2
 SSPN
 sarcospan
chr12_+_26348246 0.22 ENST00000422622.2
 SSPN
 sarcospan
chr3_-_52090461 0.22 ENST00000296483.6
ENST00000495880.1
 DUSP7
 dual specificity phosphatase 7
chr9_+_470288 0.22 ENST00000382303.1
 KANK1
 KN motif and ankyrin repeat domains 1
chr3_-_79816965 0.21 ENST00000464233.1
 ROBO1
 roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr3_+_121774202 0.21 ENST00000469710.1
ENST00000493101.1
ENST00000330540.2
ENST00000264468.5
 CD86
 CD86 molecule
chr17_-_9694614 0.21 ENST00000330255.5
ENST00000571134.1
 DHRS7C
 dehydrogenase/reductase (SDR family) member 7C
chr6_+_26365443 0.21 ENST00000527422.1
ENST00000356386.2
ENST00000396934.3
ENST00000377708.2
ENST00000396948.1
ENST00000508906.2
 BTN3A2
 butyrophilin, subfamily 3, member A2
chr13_-_36050819 0.21 ENST00000379919.4
 MAB21L1
 mab-21-like 1 (C. elegans)
chr18_+_21572737 0.21 ENST00000304621.6
 TTC39C
 tetratricopeptide repeat domain 39C
chrX_+_107288239 0.21 ENST00000217957.5
 VSIG1
 V-set and immunoglobulin domain containing 1
chr8_-_42234745 0.21 ENST00000220812.2
 DKK4
 dickkopf WNT signaling pathway inhibitor 4
chr2_-_50201327 0.20 ENST00000412315.1
 NRXN1
 neurexin 1
chr4_+_71200681 0.20 ENST00000273936.5
 CABS1
 calcium-binding protein, spermatid-specific 1
chr8_-_109799793 0.19 ENST00000297459.3
 TMEM74
 transmembrane protein 74
chr1_+_107683644 0.19 ENST00000370067.1
 NTNG1
 netrin G1
chr8_-_20040638 0.19 ENST00000519026.1
ENST00000276373.5
ENST00000440926.1
ENST00000437980.1
 SLC18A1
 solute carrier family 18 (vesicular monoamine transporter), member 1
chr13_-_103719196 0.19 ENST00000245312.3
 SLC10A2
 solute carrier family 10 (sodium/bile acid cotransporter), member 2
chr8_-_20040601 0.19 ENST00000265808.7
ENST00000522513.1
 SLC18A1
 solute carrier family 18 (vesicular monoamine transporter), member 1
chr9_-_95166884 0.19 ENST00000375561.5
 OGN
 osteoglycin
chr12_-_31479107 0.18 ENST00000542983.1
 FAM60A
 family with sequence similarity 60, member A
chr6_+_26402465 0.18 ENST00000476549.2
ENST00000289361.6
ENST00000450085.2
ENST00000425234.2
ENST00000427334.1
ENST00000506698.1
 BTN3A1
 butyrophilin, subfamily 3, member A1
chr2_+_159825143 0.18 ENST00000454300.1
ENST00000263635.6
 TANC1
 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
chr3_+_120626919 0.18 ENST00000273666.6
ENST00000471454.1
ENST00000472879.1
ENST00000497029.1
ENST00000492541.1
 STXBP5L
 syntaxin binding protein 5-like
chr11_-_129062093 0.18 ENST00000310343.9
 ARHGAP32
 Rho GTPase activating protein 32
chr6_+_135502501 0.18 ENST00000527615.1
ENST00000420123.2
ENST00000525369.1
ENST00000528774.1
ENST00000534121.1
ENST00000534044.1
ENST00000533624.1
 MYB
 v-myb avian myeloblastosis viral oncogene homolog
chr3_+_97868170 0.18 ENST00000437310.1
 OR5H14
 olfactory receptor, family 5, subfamily H, member 14
chrX_+_68835911 0.17 ENST00000525810.1
ENST00000527388.1
ENST00000374553.2
ENST00000374552.4
ENST00000338901.3
ENST00000524573.1
 EDA
 ectodysplasin A
chrX_+_105192423 0.17 ENST00000540278.1
 NRK
 Nik related kinase
chr10_+_118083919 0.17 ENST00000333254.3
 CCDC172
 coiled-coil domain containing 172
chr8_+_107738240 0.17 ENST00000449762.2
ENST00000297447.6
 OXR1
 oxidation resistance 1
chr7_+_129984630 0.17 ENST00000355388.3
ENST00000497503.1
ENST00000463587.1
ENST00000461828.1
ENST00000494311.1
ENST00000466363.2
ENST00000485477.1
ENST00000431780.2
ENST00000474905.1
 CPA5
 carboxypeptidase A5
chr3_-_98235962 0.16 ENST00000513873.1
 CLDND1
 claudin domain containing 1
chr6_-_111927062 0.16 ENST00000359831.4
 TRAF3IP2
 TRAF3 interacting protein 2
chr6_-_37665751 0.16 ENST00000297153.7
ENST00000434837.3
 MDGA1
 MAM domain containing glycosylphosphatidylinositol anchor 1
chr20_-_50722183 0.16 ENST00000371523.4
 ZFP64
 ZFP64 zinc finger protein
chr13_-_28545276 0.16 ENST00000381020.7
 CDX2
 caudal type homeobox 2
chrX_+_107288197 0.16 ENST00000415430.3
 VSIG1
 V-set and immunoglobulin domain containing 1
chr9_+_124329336 0.16 ENST00000394340.3
ENST00000436835.1
ENST00000259371.2
 DAB2IP
 DAB2 interacting protein
chr9_-_95166841 0.15 ENST00000262551.4
 OGN
 osteoglycin
chr6_+_130339710 0.15 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
 L3MBTL3
 l(3)mbt-like 3 (Drosophila)
chr14_+_61654271 0.15 ENST00000555185.1
ENST00000557294.1
ENST00000556778.1
 PRKCH
 protein kinase C, eta
chr1_+_209878182 0.15 ENST00000367027.3
 HSD11B1
 hydroxysteroid (11-beta) dehydrogenase 1
chr2_-_99871570 0.15 ENST00000333017.2
ENST00000409679.1
ENST00000423306.1
 LYG2
 lysozyme G-like 2
chr11_+_128563652 0.15 ENST00000527786.2
 FLI1
 Fli-1 proto-oncogene, ETS transcription factor
chr2_+_219135115 0.14 ENST00000248451.3
ENST00000273077.4
 PNKD
 paroxysmal nonkinesigenic dyskinesia
chr7_+_39125365 0.14 ENST00000559001.1
ENST00000464276.2
 POU6F2
 POU class 6 homeobox 2
chr10_+_98741041 0.14 ENST00000286067.2
 C10orf12
 chromosome 10 open reading frame 12
chr12_+_20963647 0.14 ENST00000381545.3
 SLCO1B3
 solute carrier organic anion transporter family, member 1B3
chr14_+_22739823 0.14 ENST00000390464.2
 TRAV38-1
 T cell receptor alpha variable 38-1
chr17_-_77924627 0.14 ENST00000572862.1
ENST00000573782.1
ENST00000574427.1
ENST00000570373.1
ENST00000340848.7
ENST00000576768.1
 TBC1D16
 TBC1 domain family, member 16
chr7_-_37488834 0.14 ENST00000310758.4
 ELMO1
 engulfment and cell motility 1
chr1_+_66458072 0.14 ENST00000423207.2
 PDE4B
 phosphodiesterase 4B, cAMP-specific
chr12_+_20963632 0.14 ENST00000540853.1
ENST00000261196.2
 SLCO1B3
 solute carrier organic anion transporter family, member 1B3
chr18_+_59000815 0.14 ENST00000262717.4
 CDH20
 cadherin 20, type 2
chr7_-_111032971 0.14 ENST00000450877.1
 IMMP2L
 IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
chr12_-_57328187 0.14 ENST00000293502.1
 SDR9C7
 short chain dehydrogenase/reductase family 9C, member 7
chr14_+_22670455 0.14 ENST00000390460.1
 TRAV26-2
 T cell receptor alpha variable 26-2
chr6_-_32157947 0.13 ENST00000375050.4
 PBX2
 pre-B-cell leukemia homeobox 2
chr12_-_31478428 0.13 ENST00000543615.1
 FAM60A
 family with sequence similarity 60, member A
chr4_+_88571429 0.13 ENST00000339673.6
ENST00000282479.7
 DMP1
 dentin matrix acidic phosphoprotein 1
chr6_+_12007963 0.13 ENST00000607445.1
 RP11-456H18.2
 RP11-456H18.2
chr20_+_42544782 0.13 ENST00000423191.2
ENST00000372999.1
 TOX2
 TOX high mobility group box family member 2
chr1_-_150738261 0.13 ENST00000448301.2
ENST00000368985.3
 CTSS
 cathepsin S
chr14_+_65016620 0.13 ENST00000298705.1
 PPP1R36
 protein phosphatase 1, regulatory subunit 36
chr16_+_12059050 0.13 ENST00000396495.3
 TNFRSF17
 tumor necrosis factor receptor superfamily, member 17
chr5_+_101569696 0.13 ENST00000597120.1
 AC008948.1
 AC008948.1
chr6_-_49604545 0.13 ENST00000371175.4
ENST00000229810.7
 RHAG
 Rh-associated glycoprotein
chr14_-_72458326 0.13 ENST00000542853.1
 AC005477.1
 AC005477.1
chr4_-_138453559 0.13 ENST00000511115.1
 PCDH18
 protocadherin 18
chr2_-_208031943 0.13 ENST00000421199.1
ENST00000457962.1
 KLF7
 Kruppel-like factor 7 (ubiquitous)
chr14_-_78083112 0.13 ENST00000216484.2
 SPTLC2
 serine palmitoyltransferase, long chain base subunit 2
chr19_+_13049413 0.13 ENST00000316448.5
ENST00000588454.1
 CALR
 calreticulin
chr17_+_39261584 0.13 ENST00000391415.1
 KRTAP4-9
 keratin associated protein 4-9
chr4_+_41614720 0.13 ENST00000509277.1
 LIMCH1
 LIM and calponin homology domains 1
chr17_-_38821373 0.13 ENST00000394052.3
 KRT222
 keratin 222
chrX_-_20236970 0.12 ENST00000379548.4
 RPS6KA3
 ribosomal protein S6 kinase, 90kDa, polypeptide 3
chr7_-_83278322 0.12 ENST00000307792.3
 SEMA3E
 sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
chr1_-_185597619 0.12 ENST00000608417.1
ENST00000436955.1
 GS1-204I12.1
 GS1-204I12.1
chr10_-_1779663 0.12 ENST00000381312.1
 ADARB2
 adenosine deaminase, RNA-specific, B2 (non-functional)
chr3_+_130569592 0.12 ENST00000533801.2
 ATP2C1
 ATPase, Ca++ transporting, type 2C, member 1
chr6_-_111927449 0.12 ENST00000368761.5
ENST00000392556.4
ENST00000340026.6
 TRAF3IP2
 TRAF3 interacting protein 2
chr3_-_72149553 0.11 ENST00000468646.2
ENST00000464271.1
 LINC00877
 long intergenic non-protein coding RNA 877
chr17_-_46716647 0.11 ENST00000608940.1
 RP11-357H14.17
 RP11-357H14.17
chr12_-_16761007 0.11 ENST00000354662.1
ENST00000441439.2
 LMO3
 LIM domain only 3 (rhombotin-like 2)
chr7_-_130080977 0.11 ENST00000223208.5
 CEP41
 centrosomal protein 41kDa
chr19_-_3557570 0.11 ENST00000355415.2
 MFSD12
 major facilitator superfamily domain containing 12
chr2_-_136678123 0.11 ENST00000422708.1
 DARS
 aspartyl-tRNA synthetase
chr15_+_58430567 0.10 ENST00000536493.1
 AQP9
 aquaporin 9
chr6_-_161695042 0.10 ENST00000366908.5
ENST00000366911.5
ENST00000366905.3
 AGPAT4
 1-acylglycerol-3-phosphate O-acyltransferase 4
chr1_-_11024258 0.10 ENST00000418570.2
 C1orf127
 chromosome 1 open reading frame 127
chr3_+_129247479 0.10 ENST00000296271.3
 RHO
 rhodopsin
chr12_+_81101277 0.10 ENST00000228641.3
 MYF6
 myogenic factor 6 (herculin)
chr7_+_116660246 0.10 ENST00000434836.1
ENST00000393443.1
ENST00000465133.1
ENST00000477742.1
ENST00000393447.4
ENST00000393444.3
 ST7
 suppression of tumorigenicity 7
chr12_+_28410128 0.10 ENST00000381259.1
ENST00000381256.1
 CCDC91
 coiled-coil domain containing 91
chr13_-_84456527 0.10 ENST00000377084.2
 SLITRK1
 SLIT and NTRK-like family, member 1
chr11_-_128894053 0.10 ENST00000392657.3
 ARHGAP32
 Rho GTPase activating protein 32
chr14_+_22771851 0.10 ENST00000390466.1
 TRAV39
 T cell receptor alpha variable 39

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0060166 olfactory pit development(GO:0060166)
0.3 0.5 GO:0060809 mesodermal to mesenchymal transition involved in gastrulation(GO:0060809)
0.2 0.5 GO:0060489 orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060488) planar dichotomous subdivision of terminal units involved in lung branching morphogenesis(GO:0060489) lateral sprouting involved in lung morphogenesis(GO:0060490) non-canonical Wnt signaling pathway involved in heart development(GO:0061341) planar cell polarity pathway involved in heart morphogenesis(GO:0061346)
0.1 0.8 GO:0060005 vestibular reflex(GO:0060005)
0.1 0.4 GO:0042663 regulation of endodermal cell fate specification(GO:0042663)
0.1 0.3 GO:0060738 epithelial-mesenchymal signaling involved in prostate gland development(GO:0060738)
0.1 0.6 GO:1903575 cornified envelope assembly(GO:1903575)
0.1 0.3 GO:0072200 apoptotic process involved in endocardial cushion morphogenesis(GO:0003277) tendon cell differentiation(GO:0035990) tendon formation(GO:0035992) intermediate mesoderm morphogenesis(GO:0048390) intermediate mesoderm formation(GO:0048391) intermediate mesodermal cell differentiation(GO:0048392) regulation of cardiac muscle fiber development(GO:0055018) positive regulation of cardiac muscle fiber development(GO:0055020) bud dilation involved in lung branching(GO:0060503) BMP signaling pathway involved in ureter morphogenesis(GO:0061149) renal system segmentation(GO:0061150) BMP signaling pathway involved in renal system segmentation(GO:0061151) pulmonary artery endothelial tube morphogenesis(GO:0061155) regulation of transcription from RNA polymerase II promoter involved in mesonephros development(GO:0061216) BMP signaling pathway involved in nephric duct formation(GO:0071893) negative regulation of branch elongation involved in ureteric bud branching(GO:0072096) negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway(GO:0072097) anterior/posterior pattern specification involved in ureteric bud development(GO:0072099) specification of ureteric bud anterior/posterior symmetry(GO:0072100) specification of ureteric bud anterior/posterior symmetry by BMP signaling pathway(GO:0072101) ureter epithelial cell differentiation(GO:0072192) negative regulation of mesenchymal cell proliferation involved in ureter development(GO:0072200) positive regulation of cell proliferation involved in outflow tract morphogenesis(GO:1901964) cardiac jelly development(GO:1905072) regulation of metanephric S-shaped body morphogenesis(GO:2000004) negative regulation of metanephric S-shaped body morphogenesis(GO:2000005) regulation of metanephric comma-shaped body morphogenesis(GO:2000006) negative regulation of metanephric comma-shaped body morphogenesis(GO:2000007)
0.1 2.4 GO:0035589 G-protein coupled purinergic nucleotide receptor signaling pathway(GO:0035589)
0.1 2.7 GO:0032331 negative regulation of chondrocyte differentiation(GO:0032331)
0.1 0.2 GO:0070105 positive regulation of interleukin-6-mediated signaling pathway(GO:0070105)
0.1 1.2 GO:0001833 inner cell mass cell proliferation(GO:0001833)
0.1 1.2 GO:0051639 actin filament network formation(GO:0051639)
0.1 0.2 GO:2000393 negative regulation of lamellipodium morphogenesis(GO:2000393)
0.1 0.2 GO:0021823 cerebral cortex tangential migration using cell-cell interactions(GO:0021823) postnatal olfactory bulb interneuron migration(GO:0021827) chemorepulsion involved in postnatal olfactory bulb interneuron migration(GO:0021836)
0.1 0.2 GO:0002644 negative regulation of tolerance induction(GO:0002644) positive regulation of interleukin-4 biosynthetic process(GO:0045404)
0.1 0.4 GO:0032468 Golgi calcium ion homeostasis(GO:0032468)
0.1 0.3 GO:0030311 poly-N-acetyllactosamine biosynthetic process(GO:0030311)
0.1 0.4 GO:0015842 aminergic neurotransmitter loading into synaptic vesicle(GO:0015842)
0.1 0.2 GO:2000854 positive regulation of corticosterone secretion(GO:2000854)
0.1 0.2 GO:1904897 regulation of hepatic stellate cell proliferation(GO:1904897) positive regulation of hepatic stellate cell proliferation(GO:1904899) hepatic stellate cell proliferation(GO:1990922)
0.1 0.2 GO:0060720 spongiotrophoblast cell proliferation(GO:0060720) regulation of spongiotrophoblast cell proliferation(GO:0060721) cell proliferation involved in embryonic placenta development(GO:0060722) regulation of cell proliferation involved in embryonic placenta development(GO:0060723)
0.1 0.2 GO:2001027 positive regulation of cell-cell adhesion mediated by integrin(GO:0033634) negative regulation of endothelial cell chemotaxis(GO:2001027)
0.0 0.1 GO:0050883 musculoskeletal movement, spinal reflex action(GO:0050883)
0.0 0.1 GO:0061727 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0 0.4 GO:0098814 spontaneous neurotransmitter secretion(GO:0061669) spontaneous synaptic transmission(GO:0098814)
0.0 0.5 GO:1904352 positive regulation of protein catabolic process in the vacuole(GO:1904352)
0.0 0.1 GO:0061300 cerebellum vasculature development(GO:0061300)
0.0 0.1 GO:0035378 carbon dioxide transmembrane transport(GO:0035378)
0.0 0.1 GO:0006667 sphinganine metabolic process(GO:0006667)
0.0 0.2 GO:0015722 canalicular bile acid transport(GO:0015722)
0.0 0.2 GO:0021764 amygdala development(GO:0021764)
0.0 0.1 GO:0048867 ganglion mother cell fate determination(GO:0007402) stem cell fate determination(GO:0048867)
0.0 0.1 GO:0006422 aspartyl-tRNA aminoacylation(GO:0006422)
0.0 0.2 GO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.0 0.2 GO:0061153 trachea submucosa development(GO:0061152) trachea gland development(GO:0061153)
0.0 0.4 GO:0045176 apical protein localization(GO:0045176)
0.0 0.1 GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains(GO:0002460)
0.0 0.8 GO:0071481 cellular response to X-ray(GO:0071481)
0.0 0.2 GO:0043553 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324) negative regulation of phosphatidylinositol 3-kinase activity(GO:0043553)
0.0 0.2 GO:0051799 negative regulation of hair follicle development(GO:0051799)
0.0 0.3 GO:0032277 negative regulation of gonadotropin secretion(GO:0032277)
0.0 0.2 GO:0002501 peptide antigen assembly with MHC protein complex(GO:0002501)
0.0 0.2 GO:0002074 extraocular skeletal muscle development(GO:0002074)
0.0 0.2 GO:2000324 positive regulation of glucocorticoid receptor signaling pathway(GO:2000324)
0.0 0.3 GO:0051918 negative regulation of fibrinolysis(GO:0051918)
0.0 0.1 GO:1901993 meiotic cell cycle phase transition(GO:0044771) regulation of meiotic cell cycle phase transition(GO:1901993) negative regulation of meiotic cell cycle phase transition(GO:1901994)
0.0 0.1 GO:0000354 cis assembly of pre-catalytic spliceosome(GO:0000354)
0.0 0.3 GO:0045078 positive regulation of interferon-gamma biosynthetic process(GO:0045078)
0.0 0.2 GO:0002767 immune response-inhibiting cell surface receptor signaling pathway(GO:0002767)
0.0 0.3 GO:0048842 positive regulation of axon extension involved in axon guidance(GO:0048842)
0.0 1.9 GO:2000649 regulation of sodium ion transmembrane transporter activity(GO:2000649)
0.0 0.1 GO:0034333 cell-substrate adherens junction assembly(GO:0007045) adherens junction assembly(GO:0034333) focal adhesion assembly(GO:0048041)
0.0 0.4 GO:0072643 interferon-gamma secretion(GO:0072643)
0.0 0.1 GO:0099543 retrograde trans-synaptic signaling by soluble gas(GO:0098923) trans-synaptic signaling by soluble gas(GO:0099543) trans-synaptic signaling by trans-synaptic complex(GO:0099545)
0.0 0.3 GO:1902083 negative regulation of peptidyl-cysteine S-nitrosylation(GO:1902083)
0.0 0.1 GO:0036269 swimming behavior(GO:0036269)
0.0 0.4 GO:0030277 maintenance of gastrointestinal epithelium(GO:0030277)
0.0 0.0 GO:1902725 negative regulation of satellite cell differentiation(GO:1902725)
0.0 0.2 GO:0000270 peptidoglycan metabolic process(GO:0000270) peptidoglycan catabolic process(GO:0009253)
0.0 0.1 GO:0015692 lead ion transport(GO:0015692)
0.0 0.3 GO:0042340 keratan sulfate catabolic process(GO:0042340)
0.0 0.2 GO:0014807 regulation of somitogenesis(GO:0014807)
0.0 0.1 GO:0006668 sphinganine-1-phosphate metabolic process(GO:0006668)
0.0 0.1 GO:1901529 positive regulation of anion channel activity(GO:1901529)
0.0 0.2 GO:0034351 regulation of glial cell apoptotic process(GO:0034350) negative regulation of glial cell apoptotic process(GO:0034351)
0.0 0.1 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.1 GO:0003150 muscular septum morphogenesis(GO:0003150)
0.0 0.3 GO:1902224 ketone body metabolic process(GO:1902224)
0.0 0.6 GO:0006099 tricarboxylic acid cycle(GO:0006099)
0.0 0.1 GO:0007352 zygotic specification of dorsal/ventral axis(GO:0007352)
0.0 0.0 GO:1902310 positive regulation of peptidyl-serine dephosphorylation(GO:1902310)
0.0 0.2 GO:0021527 spinal cord association neuron differentiation(GO:0021527)
0.0 0.1 GO:0051725 protein de-ADP-ribosylation(GO:0051725)
0.0 0.2 GO:0043249 erythrocyte maturation(GO:0043249)
0.0 0.5 GO:0015721 bile acid and bile salt transport(GO:0015721)
0.0 0.1 GO:0021796 cerebral cortex regionalization(GO:0021796)
0.0 0.3 GO:0002230 positive regulation of defense response to virus by host(GO:0002230)
0.0 0.1 GO:0070170 regulation of tooth mineralization(GO:0070170)
0.0 0.1 GO:1901898 negative regulation of relaxation of cardiac muscle(GO:1901898)
0.0 0.1 GO:0018095 protein polyglutamylation(GO:0018095)
0.0 0.1 GO:0021847 ventricular zone neuroblast division(GO:0021847)
0.0 0.2 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.5 GO:0060187 cell pole(GO:0060187)
0.1 0.8 GO:0097129 cyclin D2-CDK4 complex(GO:0097129)
0.1 0.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.2 GO:1990032 parallel fiber(GO:1990032)
0.0 0.4 GO:0070083 clathrin-sculpted monoamine transport vesicle(GO:0070081) clathrin-sculpted monoamine transport vesicle membrane(GO:0070083)
0.0 0.4 GO:0042734 presynaptic membrane(GO:0042734)
0.0 0.1 GO:0005863 striated muscle myosin thick filament(GO:0005863)
0.0 0.3 GO:0033018 sarcoplasmic reticulum lumen(GO:0033018)
0.0 0.6 GO:0016580 Sin3 complex(GO:0016580)
0.0 0.1 GO:0036021 endolysosome lumen(GO:0036021)
0.0 0.5 GO:0001891 phagocytic cup(GO:0001891)
0.0 0.1 GO:0070826 paraferritin complex(GO:0070826)
0.0 0.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 0.3 GO:0001518 voltage-gated sodium channel complex(GO:0001518)
0.0 0.6 GO:0016010 dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.0 0.1 GO:0017059 serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 0.3 GO:0031089 platelet dense granule lumen(GO:0031089)
0.0 0.7 GO:0005865 striated muscle thin filament(GO:0005865)
0.0 0.3 GO:0032982 myosin filament(GO:0032982)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0015222 serotonin transmembrane transporter activity(GO:0015222)
0.1 2.4 GO:0045028 G-protein coupled nucleotide receptor activity(GO:0001608) G-protein coupled purinergic nucleotide receptor activity(GO:0045028)
0.1 1.0 GO:0070324 thyroid hormone binding(GO:0070324)
0.1 0.6 GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591)
0.1 0.5 GO:0052828 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316) inositol-1,3,4-trisphosphate 4-phosphatase activity(GO:0017161) inositol-3,4-bisphosphate 4-phosphatase activity(GO:0052828)
0.1 2.6 GO:0051428 peptide hormone receptor binding(GO:0051428)
0.1 0.9 GO:0017034 Rap guanyl-nucleotide exchange factor activity(GO:0017034)
0.1 0.3 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.1 0.3 GO:0008532 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity(GO:0008532)
0.1 0.2 GO:0031735 CCR10 chemokine receptor binding(GO:0031735)
0.1 0.3 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.1 0.2 GO:0005275 amine transmembrane transporter activity(GO:0005275)
0.1 0.2 GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
0.0 0.7 GO:0005549 odorant binding(GO:0005549)
0.0 0.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.2 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 0.1 GO:0035379 carbon dioxide transmembrane transporter activity(GO:0035379)
0.0 0.5 GO:0001087 transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087)
0.0 0.3 GO:0060230 lipoprotein lipase activator activity(GO:0060230)
0.0 0.3 GO:0005134 interleukin-2 receptor binding(GO:0005134)
0.0 0.6 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.0 0.2 GO:0004699 calcium-independent protein kinase C activity(GO:0004699)
0.0 0.2 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 1.6 GO:0017080 sodium channel regulator activity(GO:0017080)
0.0 0.1 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.3 GO:0070700 co-receptor binding(GO:0039706) BMP receptor binding(GO:0070700)
0.0 0.0 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.0 0.2 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.0 0.1 GO:0004815 aspartate-tRNA ligase activity(GO:0004815)
0.0 0.1 GO:0001591 dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591)
0.0 0.1 GO:0005111 type 2 fibroblast growth factor receptor binding(GO:0005111)
0.0 0.1 GO:0015375 glycine:sodium symporter activity(GO:0015375)
0.0 0.1 GO:0015639 cadmium ion transmembrane transporter activity(GO:0015086) cobalt ion transmembrane transporter activity(GO:0015087) lead ion transmembrane transporter activity(GO:0015094) ferrous iron uptake transmembrane transporter activity(GO:0015639)
0.0 0.1 GO:0047256 beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity(GO:0008457) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity(GO:0047256)
0.0 0.3 GO:0015125 bile acid transmembrane transporter activity(GO:0015125)
0.0 4.6 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.2 GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135)
0.0 0.1 GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.0 0.4 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.1 GO:0090554 phosphatidylcholine-translocating ATPase activity(GO:0090554)
0.0 0.1 GO:0004969 histamine receptor activity(GO:0004969)
0.0 0.3 GO:0004745 retinol dehydrogenase activity(GO:0004745)
0.0 0.2 GO:0030547 receptor inhibitor activity(GO:0030547)
0.0 0.1 GO:0004167 dopachrome isomerase activity(GO:0004167)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.3 GO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding(GO:0000980)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.3 PID HEDGEHOG 2PATHWAY Signaling events mediated by the Hedgehog family
0.0 0.6 NABA COLLAGENS Genes encoding collagen proteins
0.0 0.7 PID IL2 STAT5 PATHWAY IL2 signaling events mediated by STAT5
0.0 0.6 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.6 REACTOME ERKS ARE INACTIVATED Genes involved in ERKs are inactivated
0.0 0.5 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.0 0.5 REACTOME SYNTHESIS OF PIPS AT THE EARLY ENDOSOME MEMBRANE Genes involved in Synthesis of PIPs at the early endosome membrane
0.0 0.5 REACTOME DSCAM INTERACTIONS Genes involved in DSCAM interactions
0.0 2.6 REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS Genes involved in Class B/2 (Secretin family receptors)
0.0 0.8 REACTOME TIGHT JUNCTION INTERACTIONS Genes involved in Tight junction interactions
0.0 0.3 REACTOME KERATAN SULFATE DEGRADATION Genes involved in Keratan sulfate degradation
0.0 0.5 REACTOME NA CL DEPENDENT NEUROTRANSMITTER TRANSPORTERS Genes involved in Na+/Cl- dependent neurotransmitter transporters
0.0 0.2 REACTOME PASSIVE TRANSPORT BY AQUAPORINS Genes involved in Passive Transport by Aquaporins
0.0 0.1 REACTOME ENDOSOMAL VACUOLAR PATHWAY Genes involved in Endosomal/Vacuolar pathway
0.0 0.8 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 0.2 REACTOME ACTIVATION OF RAC Genes involved in Activation of Rac
0.0 0.3 REACTOME KERATAN SULFATE BIOSYNTHESIS Genes involved in Keratan sulfate biosynthesis