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Epithelial-Mesenchymal Transition, human (Scheel, 2011)

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Results for NKX3-2

Z-value: 0.78

Motif logo

Transcription factors associated with NKX3-2

Gene Symbol Gene ID Gene Info
ENSG00000109705.7 NKX3-2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NKX3-2hg19_v2_chr4_-_13546632_13546674-0.049.3e-01Click!

Activity profile of NKX3-2 motif

Sorted Z-values of NKX3-2 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of NKX3-2

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr10_-_98031310 1.16 ENST00000427367.2
ENST00000413476.2
BLNK
B-cell linker
chr10_-_98031265 1.08 ENST00000224337.5
ENST00000371176.2
BLNK
B-cell linker
chr2_+_17721920 1.03 ENST00000295156.4
VSNL1
visinin-like 1
chr19_-_6720686 0.97 ENST00000245907.6
C3
complement component 3
chr1_+_86889769 0.95 ENST00000370565.4
CLCA2
chloride channel accessory 2
chr12_+_4382917 0.92 ENST00000261254.3
CCND2
cyclin D2
chr11_-_119993979 0.90 ENST00000524816.3
ENST00000525327.1
TRIM29
tripartite motif containing 29
chr8_+_86376081 0.88 ENST00000285379.5
CA2
carbonic anhydrase II
chr1_+_35247859 0.82 ENST00000373362.3
GJB3
gap junction protein, beta 3, 31kDa
chr6_-_136788001 0.78 ENST00000544465.1
MAP7
microtubule-associated protein 7
chr1_-_21059029 0.77 ENST00000444387.2
ENST00000375031.1
ENST00000518294.1
SH2D5
SH2 domain containing 5
chr2_-_70781087 0.77 ENST00000394241.3
ENST00000295400.6
TGFA
transforming growth factor, alpha
chr19_-_6767516 0.74 ENST00000245908.6
SH2D3A
SH2 domain containing 3A
chr14_+_61789382 0.71 ENST00000555082.1
PRKCH
protein kinase C, eta
chr1_+_205473720 0.63 ENST00000429964.2
ENST00000506784.1
ENST00000360066.2
CDK18
cyclin-dependent kinase 18
chr1_+_60280458 0.63 ENST00000455990.1
ENST00000371208.3
HOOK1
hook microtubule-tethering protein 1
chr3_-_112218205 0.58 ENST00000383680.4
BTLA
B and T lymphocyte associated
chr12_-_53298841 0.57 ENST00000293308.6
KRT8
keratin 8
chr11_-_119993734 0.57 ENST00000533302.1
TRIM29
tripartite motif containing 29
chr10_+_47746929 0.57 ENST00000340243.6
ENST00000374277.5
ENST00000449464.2
ENST00000538825.1
ENST00000335083.5
ANXA8L2
AL603965.1
annexin A8-like 2
Protein LOC100996760
chr11_+_128563652 0.57 ENST00000527786.2
FLI1
Fli-1 proto-oncogene, ETS transcription factor
chrX_+_105937068 0.55 ENST00000324342.3
RNF128
ring finger protein 128, E3 ubiquitin protein ligase
chr17_-_46507537 0.54 ENST00000336915.6
SKAP1
src kinase associated phosphoprotein 1
chr9_-_23821842 0.54 ENST00000544538.1
ELAVL2
ELAV like neuron-specific RNA binding protein 2
chr1_+_109792641 0.54 ENST00000271332.3
CELSR2
cadherin, EGF LAG seven-pass G-type receptor 2
chr2_-_70780770 0.53 ENST00000444975.1
ENST00000445399.1
ENST00000418333.2
TGFA
transforming growth factor, alpha
chr16_+_57406368 0.49 ENST00000006053.6
ENST00000563383.1
CX3CL1
chemokine (C-X3-C motif) ligand 1
chr7_+_18535786 0.48 ENST00000406072.1
HDAC9
histone deacetylase 9
chr2_-_70780572 0.45 ENST00000450929.1
TGFA
transforming growth factor, alpha
chr18_+_55816546 0.43 ENST00000435432.2
ENST00000357895.5
ENST00000586263.1
NEDD4L
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
chr6_-_32784687 0.43 ENST00000447394.1
ENST00000438763.2
HLA-DOB
major histocompatibility complex, class II, DO beta
chr10_-_47173994 0.40 ENST00000414655.2
ENST00000545298.1
ENST00000359178.4
ENST00000358140.4
ENST00000503031.1
ANXA8L1
LINC00842
annexin A8-like 1
long intergenic non-protein coding RNA 842
chr5_+_68710906 0.39 ENST00000325631.5
ENST00000454295.2
MARVELD2
MARVEL domain containing 2
chr5_+_68711209 0.39 ENST00000512803.1
MARVELD2
MARVEL domain containing 2
chr8_-_95274536 0.38 ENST00000297596.2
ENST00000396194.2
GEM
GTP binding protein overexpressed in skeletal muscle
chr1_-_153013588 0.36 ENST00000360379.3
SPRR2D
small proline-rich protein 2D
chrX_-_31285042 0.35 ENST00000378680.2
ENST00000378723.3
DMD
dystrophin
chr12_-_50616122 0.35 ENST00000552823.1
ENST00000552909.1
LIMA1
LIM domain and actin binding 1
chr1_-_24469602 0.35 ENST00000270800.1
IL22RA1
interleukin 22 receptor, alpha 1
chr2_-_220436248 0.34 ENST00000265318.4
OBSL1
obscurin-like 1
chr17_-_39928106 0.33 ENST00000540235.1
JUP
junction plakoglobin
chr19_-_38747172 0.33 ENST00000347262.4
ENST00000591585.1
ENST00000301242.4
PPP1R14A
protein phosphatase 1, regulatory (inhibitor) subunit 14A
chr2_+_29336855 0.33 ENST00000404424.1
CLIP4
CAP-GLY domain containing linker protein family, member 4
chr3_+_125694347 0.32 ENST00000505382.1
ENST00000511082.1
ROPN1B
rhophilin associated tail protein 1B
chr5_-_35048047 0.31 ENST00000231420.6
AGXT2
alanine--glyoxylate aminotransferase 2
chr9_-_124976185 0.31 ENST00000464484.2
LHX6
LIM homeobox 6
chr3_+_50192537 0.31 ENST00000002829.3
SEMA3F
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr14_-_21567009 0.31 ENST00000556174.1
ENST00000554478.1
ENST00000553980.1
ENST00000421093.2
ZNF219
zinc finger protein 219
chr9_-_124976154 0.29 ENST00000482062.1
LHX6
LIM homeobox 6
chr3_+_50192499 0.29 ENST00000413852.1
SEMA3F
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
chr6_-_116381918 0.28 ENST00000606080.1
FRK
fyn-related kinase
chr12_+_57984965 0.28 ENST00000540759.2
ENST00000551772.1
ENST00000550465.1
ENST00000354947.5
PIP4K2C
phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
chrX_-_15683147 0.28 ENST00000380342.3
TMEM27
transmembrane protein 27
chr12_+_56473939 0.28 ENST00000450146.2
ERBB3
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 3
chr5_+_147258266 0.28 ENST00000296694.4
SCGB3A2
secretoglobin, family 3A, member 2
chrX_-_31285018 0.27 ENST00000361471.4
DMD
dystrophin
chr6_+_18155560 0.27 ENST00000546309.2
ENST00000388870.2
ENST00000397244.1
KDM1B
lysine (K)-specific demethylase 1B
chrX_-_31284974 0.27 ENST00000378702.4
DMD
dystrophin
chr6_-_47010061 0.26 ENST00000371253.2
GPR110
G protein-coupled receptor 110
chr3_-_116163830 0.26 ENST00000333617.4
LSAMP
limbic system-associated membrane protein
chr14_-_67859422 0.25 ENST00000556532.1
PLEK2
pleckstrin 2
chr1_-_216978709 0.24 ENST00000360012.3
ESRRG
estrogen-related receptor gamma
chr17_+_53828381 0.24 ENST00000576183.1
PCTP
phosphatidylcholine transfer protein
chr1_-_217262969 0.24 ENST00000361525.3
ESRRG
estrogen-related receptor gamma
chr1_+_158223923 0.24 ENST00000289429.5
CD1A
CD1a molecule
chr10_-_131762105 0.24 ENST00000368648.3
ENST00000355311.5
EBF3
early B-cell factor 3
chr22_+_38453207 0.24 ENST00000404072.3
ENST00000424694.1
PICK1
protein interacting with PRKCA 1
chr1_+_93544791 0.24 ENST00000545708.1
ENST00000540243.1
ENST00000370298.4
MTF2
metal response element binding transcription factor 2
chr17_+_55173933 0.23 ENST00000539273.1
AKAP1
A kinase (PRKA) anchor protein 1
chr16_-_86532148 0.23 ENST00000594398.1
FENDRR
FOXF1 adjacent non-coding developmental regulatory RNA
chr11_-_19223523 0.22 ENST00000265968.3
CSRP3
cysteine and glycine-rich protein 3 (cardiac LIM protein)
chr1_+_173793641 0.22 ENST00000361951.4
DARS2
aspartyl-tRNA synthetase 2, mitochondrial
chr4_+_156587979 0.22 ENST00000511507.1
GUCY1A3
guanylate cyclase 1, soluble, alpha 3
chr19_+_1026566 0.22 ENST00000348419.3
ENST00000565096.2
ENST00000562958.2
ENST00000562075.2
ENST00000607102.1
CNN2
calponin 2
chr12_-_50616382 0.22 ENST00000552783.1
LIMA1
LIM domain and actin binding 1
chr2_-_220435963 0.22 ENST00000373876.1
ENST00000404537.1
ENST00000603926.1
ENST00000373873.4
ENST00000289656.3
OBSL1
obscurin-like 1
chr1_-_217262933 0.21 ENST00000359162.2
ESRRG
estrogen-related receptor gamma
chr1_+_173793777 0.21 ENST00000239457.5
DARS2
aspartyl-tRNA synthetase 2, mitochondrial
chr2_-_208489275 0.20 ENST00000272839.3
ENST00000426075.1
METTL21A
methyltransferase like 21A
chr15_+_52155001 0.20 ENST00000544199.1
TMOD3
tropomodulin 3 (ubiquitous)
chr1_+_149230680 0.20 ENST00000443018.1
RP11-403I13.5
RP11-403I13.5
chr3_-_112693865 0.20 ENST00000471858.1
ENST00000295863.4
ENST00000308611.3
CD200R1
CD200 receptor 1
chr9_-_131940526 0.20 ENST00000372491.2
IER5L
immediate early response 5-like
chr1_+_151739131 0.20 ENST00000400999.1
OAZ3
ornithine decarboxylase antizyme 3
chr3_+_193853927 0.20 ENST00000232424.3
HES1
hes family bHLH transcription factor 1
chr5_+_56111361 0.19 ENST00000399503.3
MAP3K1
mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
chrX_+_13707235 0.19 ENST00000464506.1
RAB9A
RAB9A, member RAS oncogene family
chr2_+_96931834 0.19 ENST00000488633.1
CIAO1
cytosolic iron-sulfur protein assembly 1
chr3_-_112218378 0.19 ENST00000334529.5
BTLA
B and T lymphocyte associated
chr6_+_32821924 0.19 ENST00000374859.2
ENST00000453265.2
PSMB9
proteasome (prosome, macropain) subunit, beta type, 9
chr6_+_24357131 0.19 ENST00000274766.1
KAAG1
kidney associated antigen 1
chr9_+_124329336 0.19 ENST00000394340.3
ENST00000436835.1
ENST00000259371.2
DAB2IP
DAB2 interacting protein
chr17_-_19771216 0.19 ENST00000395544.4
ULK2
unc-51 like autophagy activating kinase 2
chr8_-_27115931 0.18 ENST00000523048.1
STMN4
stathmin-like 4
chr17_-_43487741 0.18 ENST00000455881.1
ARHGAP27
Rho GTPase activating protein 27
chrX_-_119445306 0.18 ENST00000371369.4
ENST00000440464.1
ENST00000519908.1
TMEM255A
transmembrane protein 255A
chr4_+_144257915 0.18 ENST00000262995.4
GAB1
GRB2-associated binding protein 1
chrX_-_119445263 0.18 ENST00000309720.5
TMEM255A
transmembrane protein 255A
chr17_-_43487780 0.18 ENST00000532038.1
ENST00000528677.1
ARHGAP27
Rho GTPase activating protein 27
chr12_+_6309517 0.18 ENST00000382519.4
ENST00000009180.4
CD9
CD9 molecule
chr17_+_53828333 0.18 ENST00000268896.5
PCTP
phosphatidylcholine transfer protein
chr2_+_98703643 0.17 ENST00000477737.1
VWA3B
von Willebrand factor A domain containing 3B
chr7_+_129906660 0.17 ENST00000222481.4
CPA2
carboxypeptidase A2 (pancreatic)
chr3_-_48481518 0.17 ENST00000412398.2
ENST00000395696.1
CCDC51
coiled-coil domain containing 51
chr2_+_145780725 0.17 ENST00000451478.1
TEX41
testis expressed 41 (non-protein coding)
chr1_-_149814478 0.17 ENST00000369161.3
HIST2H2AA3
histone cluster 2, H2aa3
chr4_+_123300591 0.17 ENST00000439307.1
ENST00000388724.2
ADAD1
adenosine deaminase domain containing 1 (testis-specific)
chr15_-_51535208 0.16 ENST00000405913.3
ENST00000559878.1
CYP19A1
cytochrome P450, family 19, subfamily A, polypeptide 1
chr1_+_149822620 0.16 ENST00000369159.2
HIST2H2AA4
histone cluster 2, H2aa4
chr1_+_116519112 0.16 ENST00000369503.4
SLC22A15
solute carrier family 22, member 15
chrX_+_38420623 0.16 ENST00000378482.2
TSPAN7
tetraspanin 7
chr12_+_6494285 0.16 ENST00000541102.1
LTBR
lymphotoxin beta receptor (TNFR superfamily, member 3)
chr9_-_34458531 0.16 ENST00000379089.1
ENST00000379087.1
ENST00000379084.1
ENST00000379081.1
ENST00000379080.1
ENST00000422409.1
ENST00000379078.1
ENST00000445726.1
ENST00000297620.4
FAM219A
family with sequence similarity 219, member A
chr6_-_39290316 0.16 ENST00000425054.2
ENST00000373227.4
ENST00000373229.5
ENST00000437525.2
KCNK16
potassium channel, subfamily K, member 16
chr19_-_18548921 0.16 ENST00000545187.1
ENST00000578352.1
ISYNA1
inositol-3-phosphate synthase 1
chr6_-_47009996 0.15 ENST00000371243.2
GPR110
G protein-coupled receptor 110
chr5_-_115872142 0.15 ENST00000510263.1
SEMA6A
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr1_-_235098935 0.15 ENST00000423175.1
RP11-443B7.1
RP11-443B7.1
chr4_+_144303093 0.15 ENST00000505913.1
GAB1
GRB2-associated binding protein 1
chr3_-_52443799 0.15 ENST00000470173.1
ENST00000296288.5
BAP1
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
chr9_-_34397800 0.15 ENST00000297623.2
C9orf24
chromosome 9 open reading frame 24
chr5_+_34915444 0.15 ENST00000336767.5
BRIX1
BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)
chr11_+_34642656 0.15 ENST00000257831.3
ENST00000450654.2
EHF
ets homologous factor
chr1_+_93544821 0.14 ENST00000370303.4
MTF2
metal response element binding transcription factor 2
chr22_+_38453378 0.14 ENST00000437453.1
ENST00000356976.3
PICK1
protein interacting with PRKCA 1
chr3_+_23847432 0.14 ENST00000346855.3
UBE2E1
ubiquitin-conjugating enzyme E2E 1
chr20_+_42984330 0.14 ENST00000316673.4
ENST00000609795.1
ENST00000457232.1
ENST00000609262.1
HNF4A
hepatocyte nuclear factor 4, alpha
chr9_+_116263778 0.14 ENST00000394646.3
RGS3
regulator of G-protein signaling 3
chrX_+_44732757 0.13 ENST00000377967.4
ENST00000536777.1
ENST00000382899.4
ENST00000543216.1
KDM6A
lysine (K)-specific demethylase 6A
chr6_+_125304502 0.13 ENST00000519799.1
ENST00000368414.2
ENST00000359704.2
RNF217
ring finger protein 217
chr5_-_59481406 0.13 ENST00000546160.1
PDE4D
phosphodiesterase 4D, cAMP-specific
chr1_-_156399184 0.13 ENST00000368243.1
ENST00000357975.4
ENST00000310027.5
ENST00000400991.2
C1orf61
chromosome 1 open reading frame 61
chr8_+_144295067 0.13 ENST00000330824.2
GPIHBP1
glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
chr2_+_201754050 0.13 ENST00000426253.1
ENST00000416651.1
ENST00000454952.1
ENST00000409020.1
ENST00000359683.4
NIF3L1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
chr8_+_104033296 0.13 ENST00000521514.1
ENST00000518738.1
ATP6V1C1
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
chr14_+_104604916 0.13 ENST00000423312.2
KIF26A
kinesin family member 26A
chr6_+_31082603 0.13 ENST00000259881.9
PSORS1C1
psoriasis susceptibility 1 candidate 1
chr19_+_48867652 0.13 ENST00000344846.2
SYNGR4
synaptogyrin 4
chr3_+_111697843 0.13 ENST00000534857.1
ENST00000273359.3
ENST00000494817.1
ABHD10
abhydrolase domain containing 10
chr19_-_10628117 0.13 ENST00000333430.4
S1PR5
sphingosine-1-phosphate receptor 5
chr13_+_43355732 0.13 ENST00000313851.1
FAM216B
family with sequence similarity 216, member B
chr4_+_144258021 0.13 ENST00000262994.4
GAB1
GRB2-associated binding protein 1
chr2_+_48541776 0.12 ENST00000413569.1
ENST00000340553.3
FOXN2
forkhead box N2
chr2_+_201754135 0.12 ENST00000409357.1
ENST00000409129.2
NIF3L1
NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)
chr19_-_10444188 0.12 ENST00000293677.6
RAVER1
ribonucleoprotein, PTB-binding 1
chr17_+_40714092 0.12 ENST00000420359.1
ENST00000449624.1
ENST00000585811.1
ENST00000585909.1
ENST00000586771.1
ENST00000421097.2
ENST00000591779.1
ENST00000587858.1
ENST00000587214.1
ENST00000587157.1
ENST00000590958.1
ENST00000393818.2
COASY
CoA synthase
chrX_+_76709648 0.12 ENST00000439435.1
FGF16
fibroblast growth factor 16
chr12_+_6309963 0.12 ENST00000382515.2
CD9
CD9 molecule
chr16_-_2318055 0.12 ENST00000561518.1
ENST00000561718.1
ENST00000567147.1
ENST00000562690.1
ENST00000569598.2
RNPS1
RNA binding protein S1, serine-rich domain
chr7_+_39125365 0.11 ENST00000559001.1
ENST00000464276.2
POU6F2
POU class 6 homeobox 2
chr1_+_95583479 0.11 ENST00000455656.1
ENST00000604534.1
TMEM56
RP11-57H12.6
transmembrane protein 56
TMEM56-RWDD3 readthrough
chr17_-_10372875 0.11 ENST00000255381.2
MYH4
myosin, heavy chain 4, skeletal muscle
chr13_+_43355683 0.11 ENST00000537894.1
FAM216B
family with sequence similarity 216, member B
chr5_+_79331164 0.11 ENST00000350881.2
THBS4
thrombospondin 4
chr20_-_634000 0.11 ENST00000381962.3
SRXN1
sulfiredoxin 1
chr6_-_32557610 0.11 ENST00000360004.5
HLA-DRB1
major histocompatibility complex, class II, DR beta 1
chr11_+_64126614 0.11 ENST00000528057.1
ENST00000334205.4
ENST00000294261.4
RPS6KA4
ribosomal protein S6 kinase, 90kDa, polypeptide 4
chr17_-_79623597 0.11 ENST00000574024.1
ENST00000331056.5
PDE6G
phosphodiesterase 6G, cGMP-specific, rod, gamma
chr13_-_47012325 0.11 ENST00000409879.2
KIAA0226L
KIAA0226-like
chr7_+_115862858 0.11 ENST00000393481.2
TES
testis derived transcript (3 LIM domains)
chr17_-_17184605 0.11 ENST00000268717.5
COPS3
COP9 signalosome subunit 3
chr19_+_1026298 0.11 ENST00000263097.4
CNN2
calponin 2
chr15_-_40401062 0.11 ENST00000354670.4
ENST00000559701.1
ENST00000557870.1
ENST00000558774.1
BMF
Bcl2 modifying factor
chrX_-_44402231 0.10 ENST00000378045.4
FUNDC1
FUN14 domain containing 1
chr2_+_196521458 0.10 ENST00000409086.3
SLC39A10
solute carrier family 39 (zinc transporter), member 10
chr10_-_121296045 0.10 ENST00000392865.1
RGS10
regulator of G-protein signaling 10
chr17_+_68071389 0.10 ENST00000283936.1
ENST00000392671.1
KCNJ16
potassium inwardly-rectifying channel, subfamily J, member 16
chr1_-_217250231 0.10 ENST00000493748.1
ENST00000463665.1
ESRRG
estrogen-related receptor gamma
chr12_-_113658892 0.10 ENST00000299732.2
ENST00000416617.2
IQCD
IQ motif containing D
chr7_+_129007964 0.10 ENST00000460109.1
ENST00000474594.1
ENST00000446212.1
AHCYL2
adenosylhomocysteinase-like 2
chr20_+_2276639 0.10 ENST00000381458.5
TGM3
transglutaminase 3
chr12_+_70219052 0.10 ENST00000552032.2
ENST00000547771.2
MYRFL
myelin regulatory factor-like
chr10_-_99531709 0.10 ENST00000266066.3
SFRP5
secreted frizzled-related protein 5
chr9_-_114521783 0.10 ENST00000394779.3
ENST00000394777.4
C9orf84
chromosome 9 open reading frame 84
chr7_-_121944491 0.10 ENST00000331178.4
ENST00000427185.2
ENST00000442488.2
FEZF1
FEZ family zinc finger 1
chr1_+_152974218 0.10 ENST00000331860.3
ENST00000443178.1
ENST00000295367.4
SPRR3
small proline-rich protein 3
chr16_-_46723066 0.10 ENST00000299138.7
VPS35
vacuolar protein sorting 35 homolog (S. cerevisiae)
chr1_-_31769656 0.10 ENST00000446633.2
SNRNP40
small nuclear ribonucleoprotein 40kDa (U5)
chr1_-_44482979 0.10 ENST00000360584.2
ENST00000357730.2
ENST00000528803.1
SLC6A9
solute carrier family 6 (neurotransmitter transporter, glycine), member 9
chr20_+_30063067 0.10 ENST00000201979.2
REM1
RAS (RAD and GEM)-like GTP-binding 1
chr6_+_50681541 0.09 ENST00000008391.3
TFAP2D
transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
chr1_-_31769595 0.09 ENST00000263694.4
SNRNP40
small nuclear ribonucleoprotein 40kDa (U5)
chr1_+_119957554 0.09 ENST00000543831.1
ENST00000433745.1
ENST00000369416.3
HSD3B2
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
chrX_-_131262048 0.09 ENST00000298542.4
FRMD7
FERM domain containing 7
chr9_+_116263639 0.09 ENST00000343817.5
RGS3
regulator of G-protein signaling 3
chr15_+_88120158 0.09 ENST00000560153.1
LINC00052
long intergenic non-protein coding RNA 52
chr9_+_125281420 0.09 ENST00000340750.1
OR1J4
olfactory receptor, family 1, subfamily J, member 4
chr17_-_7297519 0.09 ENST00000576362.1
ENST00000571078.1
TMEM256-PLSCR3
TMEM256-PLSCR3 readthrough (NMD candidate)
chr18_+_28898052 0.09 ENST00000257192.4
DSG1
desmoglein 1
chr18_+_59000815 0.09 ENST00000262717.4
CDH20
cadherin 20, type 2
chr7_-_135412925 0.09 ENST00000354042.4
SLC13A4
solute carrier family 13 (sodium/sulfate symporter), member 4
chr14_+_39583427 0.09 ENST00000308317.6
ENST00000396249.2
ENST00000250379.8
ENST00000534684.2
ENST00000527381.1
GEMIN2
gem (nuclear organelle) associated protein 2
chr6_+_5261730 0.09 ENST00000274680.4
FARS2
phenylalanyl-tRNA synthetase 2, mitochondrial
chr9_-_112970436 0.09 ENST00000400613.4
C9orf152
chromosome 9 open reading frame 152
chr8_-_49834299 0.09 ENST00000396822.1
SNAI2
snail family zinc finger 2
chr4_+_88529681 0.09 ENST00000399271.1
DSPP
dentin sialophosphoprotein
chr7_+_29237354 0.09 ENST00000546235.1
CHN2
chimerin 2
chr2_-_25016251 0.09 ENST00000328379.5
PTRHD1
peptidyl-tRNA hydrolase domain containing 1
chr19_+_17337473 0.09 ENST00000598068.1
OCEL1
occludin/ELL domain containing 1
chr20_+_52824367 0.08 ENST00000371419.2
PFDN4
prefoldin subunit 4

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0001798 positive regulation of type IIa hypersensitivity(GO:0001798) positive regulation of type II hypersensitivity(GO:0002894)
0.3 0.9 GO:0042938 dipeptide transport(GO:0042938)
0.2 0.5 GO:0050902 leukocyte adhesive activation(GO:0050902)
0.1 0.4 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.1 0.4 GO:0002581 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
0.1 0.5 GO:1901842 negative regulation of high voltage-gated calcium channel activity(GO:1901842)
0.1 0.3 GO:0009436 glyoxylate catabolic process(GO:0009436)
0.1 1.7 GO:0045741 positive regulation of epidermal growth factor-activated receptor activity(GO:0045741)
0.1 0.3 GO:0042668 auditory receptor cell fate determination(GO:0042668) negative regulation of pro-B cell differentiation(GO:2000974)
0.1 0.4 GO:0071603 endothelial cell-cell adhesion(GO:0071603)
0.1 0.4 GO:2001288 positive regulation of caveolin-mediated endocytosis(GO:2001288)
0.1 0.9 GO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.1 0.6 GO:0035290 trunk segmentation(GO:0035290) trunk neural crest cell migration(GO:0036484) ventral trunk neural crest cell migration(GO:0036486)
0.1 0.7 GO:0034351 regulation of glial cell apoptotic process(GO:0034350) negative regulation of glial cell apoptotic process(GO:0034351)
0.1 0.1 GO:0071878 negative regulation of adrenergic receptor signaling pathway(GO:0071878) regulation of adrenergic receptor signaling pathway involved in heart process(GO:1901204) negative regulation of adrenergic receptor signaling pathway involved in heart process(GO:1901205)
0.1 0.4 GO:0061086 negative regulation of histone H3-K27 methylation(GO:0061086)
0.1 0.2 GO:0070563 negative regulation of vitamin D receptor signaling pathway(GO:0070563)
0.1 0.6 GO:0021800 cerebral cortex tangential migration(GO:0021800)
0.1 0.2 GO:2000863 positive regulation of estrogen secretion(GO:2000863) positive regulation of estradiol secretion(GO:2000866)
0.1 0.5 GO:0021999 neural plate anterior/posterior regionalization(GO:0021999)
0.1 0.4 GO:0034316 negative regulation of Arp2/3 complex-mediated actin nucleation(GO:0034316)
0.0 0.5 GO:1904352 positive regulation of protein catabolic process in the vacuole(GO:1904352)
0.0 0.1 GO:0071557 histone H3-K27 demethylation(GO:0071557)
0.0 0.2 GO:0035995 detection of muscle stretch(GO:0035995)
0.0 0.3 GO:0052565 response to defense-related nitric oxide production by other organism involved in symbiotic interaction(GO:0052551) response to defense-related host nitric oxide production(GO:0052565)
0.0 0.1 GO:0010986 positive regulation of lipoprotein particle clearance(GO:0010986)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 0.6 GO:0051599 response to hydrostatic pressure(GO:0051599)
0.0 0.2 GO:1902268 negative regulation of polyamine transmembrane transport(GO:1902268)
0.0 0.5 GO:0090050 positive regulation of cell migration involved in sprouting angiogenesis(GO:0090050)
0.0 0.2 GO:0036324 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324)
0.0 0.1 GO:0035522 monoubiquitinated histone deubiquitination(GO:0035521) monoubiquitinated histone H2A deubiquitination(GO:0035522)
0.0 0.9 GO:0071481 cellular response to X-ray(GO:0071481)
0.0 0.1 GO:0043163 cell envelope organization(GO:0043163) external encapsulating structure organization(GO:0045229)
0.0 0.1 GO:1903181 regulation of dopamine biosynthetic process(GO:1903179) positive regulation of dopamine biosynthetic process(GO:1903181) negative regulation of protein catabolic process in the vacuole(GO:1904351) negative regulation of lysosomal protein catabolic process(GO:1905166)
0.0 0.1 GO:0061536 glycine secretion(GO:0061536) glycine secretion, neurotransmission(GO:0061537)
0.0 0.3 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.0 0.4 GO:0071688 striated muscle myosin thick filament assembly(GO:0071688)
0.0 0.6 GO:0007342 fusion of sperm to egg plasma membrane(GO:0007342)
0.0 0.1 GO:0007402 ganglion mother cell fate determination(GO:0007402)
0.0 0.3 GO:0031340 positive regulation of vesicle fusion(GO:0031340)
0.0 0.2 GO:0052405 negative regulation by host of symbiont molecular function(GO:0052405)
0.0 0.1 GO:1901876 regulation of calcium ion binding(GO:1901876) negative regulation of calcium ion binding(GO:1901877)
0.0 0.2 GO:0075044 autophagy of host cells involved in interaction with symbiont(GO:0075044) autophagy involved in symbiotic interaction(GO:0075071)
0.0 0.2 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.3 GO:0048003 antigen processing and presentation of lipid antigen via MHC class Ib(GO:0048003) antigen processing and presentation, exogenous lipid antigen via MHC class Ib(GO:0048007)
0.0 0.1 GO:0044333 Wnt signaling pathway involved in digestive tract morphogenesis(GO:0044333)
0.0 1.0 GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus(GO:0035774)
0.0 0.1 GO:0002399 MHC class II protein complex assembly(GO:0002399)
0.0 0.1 GO:0043988 histone H3-S28 phosphorylation(GO:0043988)
0.0 0.1 GO:0000117 regulation of transcription involved in G2/M transition of mitotic cell cycle(GO:0000117)
0.0 0.2 GO:0051694 pointed-end actin filament capping(GO:0051694)
0.0 0.1 GO:0021797 forebrain anterior/posterior pattern specification(GO:0021797)
0.0 0.6 GO:0035855 megakaryocyte development(GO:0035855)
0.0 0.2 GO:0007039 protein catabolic process in the vacuole(GO:0007039)
0.0 0.3 GO:2000786 positive regulation of autophagosome assembly(GO:2000786)
0.0 0.1 GO:0016139 glycoside catabolic process(GO:0016139)
0.0 0.1 GO:0035928 rRNA import into mitochondrion(GO:0035928)
0.0 0.1 GO:0070346 positive regulation of fat cell proliferation(GO:0070346) positive regulation of cell chemotaxis to fibroblast growth factor(GO:1904849) positive regulation of endothelial cell chemotaxis to fibroblast growth factor(GO:2000546)
0.0 0.1 GO:1901594 detection of temperature stimulus involved in thermoception(GO:0050960) response to capsazepine(GO:1901594)
0.0 0.1 GO:2000189 positive regulation of cholesterol homeostasis(GO:2000189)
0.0 0.1 GO:0046967 cytosol to ER transport(GO:0046967)
0.0 0.2 GO:1901898 negative regulation of relaxation of cardiac muscle(GO:1901898)
0.0 0.0 GO:0052314 phytoalexin metabolic process(GO:0052314)
0.0 0.1 GO:0034344 type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344)
0.0 0.1 GO:0008272 sulfate transport(GO:0008272)
0.0 0.2 GO:2001224 positive regulation of neuron migration(GO:2001224)
0.0 0.3 GO:0035641 locomotory exploration behavior(GO:0035641)
0.0 0.1 GO:0033353 S-adenosylmethionine cycle(GO:0033353)
0.0 2.2 GO:0030183 B cell differentiation(GO:0030183)
0.0 0.1 GO:0032020 ISG15-protein conjugation(GO:0032020)
0.0 0.1 GO:0042986 positive regulation of amyloid precursor protein biosynthetic process(GO:0042986)
0.0 0.5 GO:0035728 response to hepatocyte growth factor(GO:0035728)
0.0 0.1 GO:0060024 rhythmic synaptic transmission(GO:0060024)
0.0 0.0 GO:0048690 modulation by virus of host transcription(GO:0019056) regulation of sprouting of injured axon(GO:0048686) positive regulation of sprouting of injured axon(GO:0048687) regulation of axon extension involved in regeneration(GO:0048690) positive regulation of axon extension involved in regeneration(GO:0048691) modulation by symbiont of host transcription(GO:0052026)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.1 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.0 0.8 GO:0061028 establishment of endothelial barrier(GO:0061028)
0.0 0.1 GO:2000623 regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000622) negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:2000623)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.6 GO:0045022 early endosome to late endosome transport(GO:0045022)
0.0 0.1 GO:0038172 interleukin-33-mediated signaling pathway(GO:0038172)
0.0 0.1 GO:0090625 mRNA cleavage involved in gene silencing by siRNA(GO:0090625)
0.0 0.1 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.0 0.0 GO:0046684 response to pyrethroid(GO:0046684)
0.0 0.1 GO:2000253 positive regulation of feeding behavior(GO:2000253)
0.0 0.1 GO:0036444 calcium ion transmembrane import into mitochondrion(GO:0036444)
0.0 1.2 GO:1900181 negative regulation of protein localization to nucleus(GO:1900181)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0097129 cyclin D2-CDK4 complex(GO:0097129)
0.1 0.6 GO:0070695 FHF complex(GO:0070695)
0.1 0.9 GO:0016013 syntrophin complex(GO:0016013)
0.1 0.8 GO:0061689 tricellular tight junction(GO:0061689)
0.1 0.6 GO:1990393 3M complex(GO:1990393)
0.1 0.2 GO:1990032 parallel fiber(GO:1990032)
0.0 0.3 GO:0071664 catenin-TCF7L2 complex(GO:0071664)
0.0 0.2 GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221)
0.0 0.2 GO:0071817 MMXD complex(GO:0071817)
0.0 0.6 GO:0042613 MHC class II protein complex(GO:0042613)
0.0 0.5 GO:0005922 connexon complex(GO:0005922)
0.0 0.6 GO:0016010 dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665)
0.0 1.6 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.0 0.2 GO:1990111 spermatoproteasome complex(GO:1990111)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 1.0 GO:0009925 basal plasma membrane(GO:0009925)
0.0 0.5 GO:0042101 T cell receptor complex(GO:0042101)
0.0 0.1 GO:1990425 ryanodine receptor complex(GO:1990425)
0.0 0.1 GO:0061574 ASAP complex(GO:0061574)
0.0 0.1 GO:0030868 smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
0.0 0.0 GO:0097629 extrinsic component of omegasome membrane(GO:0097629)
0.0 0.0 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.0 0.4 GO:0035098 ESC/E(Z) complex(GO:0035098)
0.0 0.6 GO:0001533 cornified envelope(GO:0001533)
0.0 0.1 GO:0016272 prefoldin complex(GO:0016272)
0.0 1.3 GO:0035578 azurophil granule lumen(GO:0035578)
0.0 1.4 GO:0005913 cell-cell adherens junction(GO:0005913)
0.0 0.1 GO:0044666 MLL3/4 complex(GO:0044666)
0.0 0.1 GO:0097504 Gemini of coiled bodies(GO:0097504)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0004699 calcium-independent protein kinase C activity(GO:0004699)
0.1 0.8 GO:0050682 AF-2 domain binding(GO:0050682)
0.1 0.9 GO:0004064 arylesterase activity(GO:0004064)
0.1 2.2 GO:0005068 transmembrane receptor protein tyrosine kinase adaptor activity(GO:0005068)
0.1 0.3 GO:0016309 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309)
0.1 0.4 GO:0004815 aspartate-tRNA ligase activity(GO:0004815)
0.1 0.3 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.3 GO:0042015 interleukin-20 binding(GO:0042015)
0.1 1.7 GO:0098641 cadherin binding involved in cell-cell adhesion(GO:0098641)
0.0 0.3 GO:0034648 histone demethylase activity (H3-dimethyl-K4 specific)(GO:0034648)
0.0 0.1 GO:0071558 histone demethylase activity (H3-K27 specific)(GO:0071558)
0.0 0.4 GO:0019870 potassium channel inhibitor activity(GO:0019870)
0.0 0.4 GO:0008525 phosphatidylcholine transporter activity(GO:0008525)
0.0 0.3 GO:0008241 peptidyl-dipeptidase activity(GO:0008241)
0.0 0.2 GO:0008073 ornithine decarboxylase inhibitor activity(GO:0008073)
0.0 0.8 GO:0050998 nitric-oxide synthase binding(GO:0050998)
0.0 0.6 GO:0045499 chemorepellent activity(GO:0045499)
0.0 0.3 GO:0086083 cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication(GO:0086083)
0.0 0.5 GO:0032395 MHC class II receptor activity(GO:0032395)
0.0 0.1 GO:0004711 ribosomal protein S6 kinase activity(GO:0004711)
0.0 0.4 GO:0071933 Arp2/3 complex binding(GO:0071933)
0.0 0.1 GO:0004769 steroid delta-isomerase activity(GO:0004769)
0.0 0.9 GO:0005229 intracellular calcium activated chloride channel activity(GO:0005229)
0.0 0.1 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.0 0.3 GO:0030882 lipid antigen binding(GO:0030882) endogenous lipid antigen binding(GO:0030883) exogenous lipid antigen binding(GO:0030884)
0.0 1.6 GO:0005154 epidermal growth factor receptor binding(GO:0005154)
0.0 0.3 GO:0004969 histamine receptor activity(GO:0004969)
0.0 0.5 GO:0005243 gap junction channel activity(GO:0005243)
0.0 0.2 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.0 0.1 GO:0015375 glycine:sodium symporter activity(GO:0015375)
0.0 0.2 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.0 0.1 GO:0004464 leukotriene-C4 synthase activity(GO:0004464)
0.0 0.1 GO:0102008 cytosolic dipeptidase activity(GO:0102008)
0.0 0.6 GO:0008093 cytoskeletal adaptor activity(GO:0008093)
0.0 0.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.4 GO:0032041 histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041)
0.0 0.1 GO:0005330 dopamine:sodium symporter activity(GO:0005330)
0.0 0.1 GO:0016286 small conductance calcium-activated potassium channel activity(GO:0016286)
0.0 0.1 GO:0042296 ISG15 transferase activity(GO:0042296)
0.0 0.1 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 0.1 GO:0004517 nitric-oxide synthase activity(GO:0004517)
0.0 0.2 GO:0031433 telethonin binding(GO:0031433)
0.0 0.6 GO:0051959 dynein light intermediate chain binding(GO:0051959)
0.0 0.2 GO:0038132 neuregulin binding(GO:0038132)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.0 GO:0001002 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 1 promoter sequence-specific DNA binding(GO:0001002) RNA polymerase III type 2 promoter sequence-specific DNA binding(GO:0001003)
0.0 0.1 GO:0017018 myosin phosphatase activity(GO:0017018)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.5 GO:0048020 CCR chemokine receptor binding(GO:0048020)
0.0 0.1 GO:0002114 interleukin-33 receptor activity(GO:0002114)
0.0 0.6 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.1 GO:0015272 ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.0 0.1 GO:0038036 sphingosine-1-phosphate receptor activity(GO:0038036)
0.0 0.1 GO:0097322 7SK snRNA binding(GO:0097322)
0.0 1.1 GO:0005070 SH3/SH2 adaptor activity(GO:0005070)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.4 SA B CELL RECEPTOR COMPLEXES Antigen binding to B cell receptors activates protein tyrosine kinases, such as the Src family, which ultimate activate MAP kinases.
0.1 1.9 PID ERBB NETWORK PATHWAY ErbB receptor signaling network
0.0 1.0 PID ERB GENOMIC PATHWAY Validated nuclear estrogen receptor beta network
0.0 0.9 PID IL2 STAT5 PATHWAY IL2 signaling events mediated by STAT5
0.0 0.1 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 0.3 PID ECADHERIN KERATINOCYTE PATHWAY E-cadherin signaling in keratinocytes
0.0 0.5 PID EPO PATHWAY EPO signaling pathway
0.0 1.0 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.2 REACTOME REGULATION OF SIGNALING BY CBL Genes involved in Regulation of signaling by CBL
0.1 0.9 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.0 1.0 REACTOME INITIAL TRIGGERING OF COMPLEMENT Genes involved in Initial triggering of complement
0.0 0.5 REACTOME GAP JUNCTION ASSEMBLY Genes involved in Gap junction assembly
0.0 0.3 REACTOME PYRIMIDINE CATABOLISM Genes involved in Pyrimidine catabolism
0.0 0.5 REACTOME MITOCHONDRIAL TRNA AMINOACYLATION Genes involved in Mitochondrial tRNA aminoacylation
0.0 0.5 REACTOME SIGNALING BY CONSTITUTIVELY ACTIVE EGFR Genes involved in Signaling by constitutively active EGFR
0.0 0.6 REACTOME EFFECTS OF PIP2 HYDROLYSIS Genes involved in Effects of PIP2 hydrolysis
0.0 0.8 REACTOME G1 PHASE Genes involved in G1 Phase
0.0 0.4 REACTOME TRAFFICKING OF GLUR2 CONTAINING AMPA RECEPTORS Genes involved in Trafficking of GluR2-containing AMPA receptors
0.0 0.8 REACTOME STRIATED MUSCLE CONTRACTION Genes involved in Striated Muscle Contraction
0.0 0.2 REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING Genes involved in Downregulation of ERBB2:ERBB3 signaling
0.0 0.9 REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY Genes involved in Nuclear Receptor transcription pathway