Epithelial-Mesenchymal Transition, human (Scheel, 2011)
Name | miRBASE accession |
---|---|
hsa-miR-499a-5p
|
MIMAT0002870 |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_+_102104980 | 0.36 |
ENST00000545560.2 |
ITGBL1 |
integrin, beta-like 1 (with EGF-like repeat domains) |
chr14_-_61116168 | 0.34 |
ENST00000247182.6 |
SIX1 |
SIX homeobox 1 |
chr6_+_72596604 | 0.27 |
ENST00000348717.5 ENST00000517960.1 ENST00000518273.1 ENST00000522291.1 ENST00000521978.1 ENST00000520567.1 ENST00000264839.7 |
RIMS1 |
regulating synaptic membrane exocytosis 1 |
chr5_-_158526756 | 0.25 |
ENST00000313708.6 ENST00000517373.1 |
EBF1 |
early B-cell factor 1 |
chr4_+_123747834 | 0.16 |
ENST00000264498.3 |
FGF2 |
fibroblast growth factor 2 (basic) |
chr1_+_145611010 | 0.14 |
ENST00000369291.5 |
RNF115 |
ring finger protein 115 |
chr8_-_23712312 | 0.13 |
ENST00000290271.2 |
STC1 |
stanniocalcin 1 |
chr8_+_38614807 | 0.11 |
ENST00000330691.6 ENST00000348567.4 |
TACC1 |
transforming, acidic coiled-coil containing protein 1 |
chr3_+_29322803 | 0.10 |
ENST00000396583.3 ENST00000383767.2 |
RBMS3 |
RNA binding motif, single stranded interacting protein 3 |
chr7_+_90225796 | 0.10 |
ENST00000380050.3 |
CDK14 |
cyclin-dependent kinase 14 |
chr16_-_80838195 | 0.09 |
ENST00000570137.2 |
CDYL2 |
chromodomain protein, Y-like 2 |
chr17_+_66508537 | 0.09 |
ENST00000392711.1 ENST00000585427.1 ENST00000589228.1 ENST00000536854.2 ENST00000588702.1 ENST00000589309.1 |
PRKAR1A |
protein kinase, cAMP-dependent, regulatory, type I, alpha |
chr5_-_114880533 | 0.08 |
ENST00000274457.3 |
FEM1C |
fem-1 homolog c (C. elegans) |
chr15_-_49338748 | 0.07 |
ENST00000559471.1 |
SECISBP2L |
SECIS binding protein 2-like |
chr10_+_63661053 | 0.07 |
ENST00000279873.7 |
ARID5B |
AT rich interactive domain 5B (MRF1-like) |
chr1_-_225840747 | 0.07 |
ENST00000366843.2 ENST00000366844.3 |
ENAH |
enabled homolog (Drosophila) |
chr14_+_29234870 | 0.07 |
ENST00000382535.3 |
FOXG1 |
forkhead box G1 |
chr2_+_120517174 | 0.07 |
ENST00000263708.2 |
PTPN4 |
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) |
chr14_+_105781048 | 0.06 |
ENST00000458164.2 ENST00000447393.1 |
PACS2 |
phosphofurin acidic cluster sorting protein 2 |
chr17_+_58677539 | 0.06 |
ENST00000305921.3 |
PPM1D |
protein phosphatase, Mg2+/Mn2+ dependent, 1D |
chr3_-_18466787 | 0.06 |
ENST00000338745.6 ENST00000450898.1 |
SATB1 |
SATB homeobox 1 |
chr16_-_4897266 | 0.06 |
ENST00000591451.1 ENST00000436648.5 ENST00000381983.3 ENST00000588297.1 ENST00000321919.9 |
GLYR1 |
glyoxylate reductase 1 homolog (Arabidopsis) |
chr13_+_49550015 | 0.06 |
ENST00000492622.2 |
FNDC3A |
fibronectin type III domain containing 3A |
chr6_+_36646435 | 0.06 |
ENST00000244741.5 ENST00000405375.1 ENST00000373711.2 |
CDKN1A |
cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
chr15_-_45815005 | 0.06 |
ENST00000261867.4 |
SLC30A4 |
solute carrier family 30 (zinc transporter), member 4 |
chr9_+_96793076 | 0.05 |
ENST00000375360.3 |
PTPDC1 |
protein tyrosine phosphatase domain containing 1 |
chr1_+_36396677 | 0.05 |
ENST00000373191.4 ENST00000397828.2 |
AGO3 |
argonaute RISC catalytic component 3 |
chr5_-_76788317 | 0.05 |
ENST00000296679.4 |
WDR41 |
WD repeat domain 41 |
chr7_-_120498357 | 0.05 |
ENST00000415871.1 ENST00000222747.3 ENST00000430985.1 |
TSPAN12 |
tetraspanin 12 |
chr5_-_131132614 | 0.05 |
ENST00000307968.7 ENST00000307954.8 |
FNIP1 |
folliculin interacting protein 1 |
chr19_-_7293942 | 0.05 |
ENST00000341500.5 ENST00000302850.5 |
INSR |
insulin receptor |
chr16_+_53088885 | 0.05 |
ENST00000566029.1 ENST00000447540.1 |
CHD9 |
chromodomain helicase DNA binding protein 9 |
chr17_-_8534067 | 0.04 |
ENST00000360416.3 ENST00000269243.4 |
MYH10 |
myosin, heavy chain 10, non-muscle |
chr13_-_107220455 | 0.04 |
ENST00000400198.3 |
ARGLU1 |
arginine and glutamate rich 1 |
chr3_-_72496035 | 0.04 |
ENST00000477973.2 |
RYBP |
RING1 and YY1 binding protein |
chr1_+_50574585 | 0.04 |
ENST00000371824.1 ENST00000371823.4 |
ELAVL4 |
ELAV like neuron-specific RNA binding protein 4 |
chr9_-_72374848 | 0.04 |
ENST00000377200.5 ENST00000340434.4 ENST00000472967.2 |
PTAR1 |
protein prenyltransferase alpha subunit repeat containing 1 |
chr1_+_97187318 | 0.04 |
ENST00000609116.1 ENST00000370198.1 ENST00000370197.1 ENST00000426398.2 ENST00000394184.3 |
PTBP2 |
polypyrimidine tract binding protein 2 |
chr3_-_15374033 | 0.04 |
ENST00000253688.5 ENST00000383791.3 |
SH3BP5 |
SH3-domain binding protein 5 (BTK-associated) |
chr5_+_60628074 | 0.04 |
ENST00000252744.5 |
ZSWIM6 |
zinc finger, SWIM-type containing 6 |
chr16_+_54964740 | 0.04 |
ENST00000394636.4 |
IRX5 |
iroquois homeobox 5 |
chr14_-_50698276 | 0.04 |
ENST00000216373.5 |
SOS2 |
son of sevenless homolog 2 (Drosophila) |
chr7_+_138916231 | 0.03 |
ENST00000473989.3 ENST00000288561.8 |
UBN2 |
ubinuclein 2 |
chr9_-_127952032 | 0.03 |
ENST00000456642.1 ENST00000373546.3 ENST00000373547.4 |
PPP6C |
protein phosphatase 6, catalytic subunit |
chr1_-_70820357 | 0.03 |
ENST00000370944.4 ENST00000262346.6 |
ANKRD13C |
ankyrin repeat domain 13C |
chr5_+_161274685 | 0.03 |
ENST00000428797.2 |
GABRA1 |
gamma-aminobutyric acid (GABA) A receptor, alpha 1 |
chr9_+_82186872 | 0.03 |
ENST00000376544.3 ENST00000376520.4 |
TLE4 |
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) |
chr2_+_228029281 | 0.03 |
ENST00000396578.3 |
COL4A3 |
collagen, type IV, alpha 3 (Goodpasture antigen) |
chr13_+_50571155 | 0.03 |
ENST00000420995.2 ENST00000378182.3 ENST00000356017.4 ENST00000457662.2 |
TRIM13 |
tripartite motif containing 13 |
chr1_-_16678914 | 0.03 |
ENST00000375592.3 |
FBXO42 |
F-box protein 42 |
chr5_+_112312416 | 0.03 |
ENST00000389063.2 |
DCP2 |
decapping mRNA 2 |
chr12_+_72148614 | 0.03 |
ENST00000261263.3 |
RAB21 |
RAB21, member RAS oncogene family |
chr3_+_89156674 | 0.03 |
ENST00000336596.2 |
EPHA3 |
EPH receptor A3 |
chr4_+_159690218 | 0.03 |
ENST00000264433.6 |
FNIP2 |
folliculin interacting protein 2 |
chr5_+_122110691 | 0.03 |
ENST00000379516.2 ENST00000505934.1 ENST00000514949.1 |
SNX2 |
sorting nexin 2 |
chr10_+_112631547 | 0.03 |
ENST00000280154.7 ENST00000393104.2 |
PDCD4 |
programmed cell death 4 (neoplastic transformation inhibitor) |
chr4_+_139936905 | 0.02 |
ENST00000280614.2 |
CCRN4L |
CCR4 carbon catabolite repression 4-like (S. cerevisiae) |
chr3_+_186501336 | 0.02 |
ENST00000323963.5 ENST00000440191.2 ENST00000356531.5 |
EIF4A2 |
eukaryotic translation initiation factor 4A2 |
chr19_-_3700388 | 0.02 |
ENST00000589578.1 ENST00000537021.1 ENST00000539785.1 ENST00000335312.3 |
PIP5K1C |
phosphatidylinositol-4-phosphate 5-kinase, type I, gamma |
chr17_-_62050278 | 0.02 |
ENST00000578147.1 ENST00000435607.1 |
SCN4A |
sodium channel, voltage-gated, type IV, alpha subunit |
chr5_+_112043186 | 0.02 |
ENST00000509732.1 ENST00000457016.1 ENST00000507379.1 |
APC |
adenomatous polyposis coli |
chr1_+_43148059 | 0.02 |
ENST00000321358.7 ENST00000332220.6 |
YBX1 |
Y box binding protein 1 |
chr5_+_55033845 | 0.02 |
ENST00000353507.5 ENST00000514278.2 ENST00000505374.1 ENST00000506511.1 |
DDX4 |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 |
chr1_+_19923454 | 0.02 |
ENST00000602662.1 ENST00000602293.1 ENST00000322753.6 |
MINOS1-NBL1 MINOS1 |
MINOS1-NBL1 readthrough mitochondrial inner membrane organizing system 1 |
chr2_-_86564776 | 0.02 |
ENST00000165698.5 ENST00000541910.1 ENST00000535845.1 |
REEP1 |
receptor accessory protein 1 |
chr1_+_90098606 | 0.02 |
ENST00000370454.4 |
LRRC8C |
leucine rich repeat containing 8 family, member C |
chrX_-_24045303 | 0.02 |
ENST00000328046.8 |
KLHL15 |
kelch-like family member 15 |
chr10_-_27149792 | 0.02 |
ENST00000376140.3 ENST00000376170.4 |
ABI1 |
abl-interactor 1 |
chrY_+_15016725 | 0.02 |
ENST00000336079.3 |
DDX3Y |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
chrX_+_28605516 | 0.01 |
ENST00000378993.1 |
IL1RAPL1 |
interleukin 1 receptor accessory protein-like 1 |
chr8_+_48920960 | 0.01 |
ENST00000523111.2 ENST00000523432.1 ENST00000521346.1 ENST00000517630.1 |
UBE2V2 |
ubiquitin-conjugating enzyme E2 variant 2 |
chr16_-_46655538 | 0.01 |
ENST00000303383.3 |
SHCBP1 |
SHC SH2-domain binding protein 1 |
chr1_-_159684371 | 0.01 |
ENST00000255030.5 ENST00000437342.1 ENST00000368112.1 ENST00000368111.1 ENST00000368110.1 ENST00000343919.2 |
CRP |
C-reactive protein, pentraxin-related |
chr6_+_133562472 | 0.01 |
ENST00000430974.2 ENST00000367895.5 ENST00000355167.3 ENST00000355286.6 |
EYA4 |
eyes absent homolog 4 (Drosophila) |
chr17_+_38219063 | 0.01 |
ENST00000584985.1 ENST00000264637.4 ENST00000450525.2 |
THRA |
thyroid hormone receptor, alpha |
chr6_+_163835669 | 0.01 |
ENST00000453779.2 ENST00000275262.7 ENST00000392127.2 ENST00000361752.3 |
QKI |
QKI, KH domain containing, RNA binding |
chr3_-_71774516 | 0.01 |
ENST00000425534.3 |
EIF4E3 |
eukaryotic translation initiation factor 4E family member 3 |
chr15_+_57210818 | 0.01 |
ENST00000438423.2 ENST00000267811.5 ENST00000452095.2 ENST00000559609.1 ENST00000333725.5 |
TCF12 |
transcription factor 12 |
chr3_-_15563229 | 0.01 |
ENST00000383786.5 ENST00000383787.2 ENST00000383785.2 ENST00000383788.5 ENST00000603808.1 |
COLQ |
collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase |
chr18_-_21977748 | 0.01 |
ENST00000399441.4 ENST00000319481.3 |
OSBPL1A |
oxysterol binding protein-like 1A |
chr10_-_75255724 | 0.01 |
ENST00000342558.3 ENST00000360663.5 ENST00000394829.2 ENST00000394828.2 ENST00000394822.2 |
PPP3CB |
protein phosphatase 3, catalytic subunit, beta isozyme |
chr1_+_66999799 | 0.01 |
ENST00000371035.3 ENST00000371036.3 ENST00000371037.4 |
SGIP1 |
SH3-domain GRB2-like (endophilin) interacting protein 1 |
chr1_-_21113105 | 0.01 |
ENST00000375000.1 ENST00000419490.1 ENST00000414993.1 ENST00000443615.1 ENST00000312239.5 |
HP1BP3 |
heterochromatin protein 1, binding protein 3 |
chr1_-_108507631 | 0.01 |
ENST00000527011.1 ENST00000370056.4 |
VAV3 |
vav 3 guanine nucleotide exchange factor |
chr17_-_60142609 | 0.01 |
ENST00000397786.2 |
MED13 |
mediator complex subunit 13 |
chr11_-_118047376 | 0.01 |
ENST00000278947.5 |
SCN2B |
sodium channel, voltage-gated, type II, beta subunit |
chr15_-_64648273 | 0.00 |
ENST00000607537.1 ENST00000303052.7 ENST00000303032.6 |
CSNK1G1 |
casein kinase 1, gamma 1 |
chr5_+_143584814 | 0.00 |
ENST00000507359.3 |
KCTD16 |
potassium channel tetramerization domain containing 16 |
chr9_-_34126730 | 0.00 |
ENST00000361264.4 |
DCAF12 |
DDB1 and CUL4 associated factor 12 |
chr17_-_40306934 | 0.00 |
ENST00000592574.1 ENST00000550406.1 ENST00000547517.1 ENST00000393860.3 ENST00000346213.4 |
CTD-2132N18.3 RAB5C |
Uncharacterized protein RAB5C, member RAS oncogene family |
chr8_+_42752053 | 0.00 |
ENST00000307602.4 |
HOOK3 |
hook microtubule-tethering protein 3 |
chrX_+_16737718 | 0.00 |
ENST00000380155.3 |
SYAP1 |
synapse associated protein 1 |
chr7_-_106301405 | 0.00 |
ENST00000523505.1 |
CCDC71L |
coiled-coil domain containing 71-like |
chr17_-_45266542 | 0.00 |
ENST00000531206.1 ENST00000527547.1 ENST00000446365.2 ENST00000575483.1 ENST00000066544.3 |
CDC27 |
cell division cycle 27 |
chr7_+_155089486 | 0.00 |
ENST00000340368.4 ENST00000344756.4 ENST00000425172.1 ENST00000342407.5 |
INSIG1 |
insulin induced gene 1 |
chr17_-_5389477 | 0.00 |
ENST00000572834.1 ENST00000570848.1 ENST00000571971.1 ENST00000158771.4 |
DERL2 |
derlin 2 |
chr17_-_73775839 | 0.00 |
ENST00000592643.1 ENST00000591890.1 ENST00000587171.1 ENST00000254810.4 ENST00000589599.1 |
H3F3B |
H3 histone, family 3B (H3.3B) |
chr1_-_39347255 | 0.00 |
ENST00000454994.2 ENST00000357771.3 |
GJA9 |
gap junction protein, alpha 9, 59kDa |
chr22_+_30279144 | 0.00 |
ENST00000401950.2 ENST00000333027.3 ENST00000445401.1 ENST00000323630.5 ENST00000351488.3 |
MTMR3 |
myotubularin related protein 3 |
chr17_-_36762095 | 0.00 |
ENST00000578925.1 ENST00000264659.7 |
SRCIN1 |
SRC kinase signaling inhibitor 1 |
chr7_-_44924939 | 0.00 |
ENST00000395699.2 |
PURB |
purine-rich element binding protein B |
chr2_+_176987088 | 0.00 |
ENST00000249499.6 |
HOXD9 |
homeobox D9 |
chr7_+_114055052 | 0.00 |
ENST00000462331.1 ENST00000408937.3 ENST00000403559.4 ENST00000350908.4 ENST00000393498.2 ENST00000393495.3 ENST00000378237.3 ENST00000393489.3 |
FOXP2 |
forkhead box P2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:2000729 | positive regulation of mesenchymal cell proliferation involved in ureter development(GO:2000729) |
0.0 | 0.2 | GO:2000546 | positive regulation of cell chemotaxis to fibroblast growth factor(GO:1904849) positive regulation of endothelial cell chemotaxis to fibroblast growth factor(GO:2000546) |
0.0 | 0.1 | GO:0060574 | intestinal epithelial cell maturation(GO:0060574) |
0.0 | 0.3 | GO:0098828 | positive regulation of inhibitory postsynaptic potential(GO:0097151) modulation of inhibitory postsynaptic potential(GO:0098828) |
0.0 | 0.0 | GO:0002904 | positive regulation of B cell apoptotic process(GO:0002904) |
0.0 | 0.1 | GO:0001886 | endothelial cell morphogenesis(GO:0001886) |
0.0 | 0.0 | GO:1990535 | transformation of host cell by virus(GO:0019087) neuron projection maintenance(GO:1990535) |
0.0 | 0.0 | GO:0021592 | fourth ventricle development(GO:0021592) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0000308 | cytoplasmic cyclin-dependent protein kinase holoenzyme complex(GO:0000308) |
0.0 | 0.1 | GO:0070557 | PCNA-p21 complex(GO:0070557) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0019912 | cyclin-dependent protein kinase activating kinase activity(GO:0019912) |
0.0 | 0.1 | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616) |
0.0 | 0.1 | GO:0042030 | ATPase inhibitor activity(GO:0042030) |
0.0 | 0.1 | GO:0035368 | selenocysteine insertion sequence binding(GO:0035368) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |
0.0 | 0.2 | REACTOME SIGNALING BY FGFR3 MUTANTS | Genes involved in Signaling by FGFR3 mutants |